CsaV3_6G031910 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G031910
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MTD1
Location	chr6 : 18019438 .. 18021404 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTCTGCTGACGTGGCTCTATCCCTTTTATAACACCACATTCTCTTCCTAAATTTTCCCCTGCTTTAACCTCCATCCTAATACTTCTGCTCTCTTCCAATCACATACTTACAATTTCTCTTATCAAAATGAAAAGTAGTTCAGGTTAGGTTGGAGCCAGTGTGGACTTTGGTTTTTTCGTTTTAGGTTAGAGACAGTTTTTGTTATTGTTAAAGAAAAGGTTAGAAATTAAAAAGGATAAGAAAAAGGTGAGAGCGGAACATGAAAGGGCGATGGAAGCGCAGGCAGGGGATAAAAGGCTAAAATAATAAAAGAAAAGGAAAAAAAGAGAAAATAATAAAGTGATGAATGGAAGCCCGGCAGATGAGGATAAGGCCTTGGGCTTTCCTTTTCGGAGTTCTTTATCCTTTTCATTAACTCTCTCATCCTAGATGATATTACTCTTCTCTTCTCCTTCATTAATTGTCTACAAATCCATAATTTTCTATATTTAAATTCTTGTCTCTTCTTCTCTACACAATCTCTCCACTCCCATCGATATATCAATGCCAAACTATATTTCTTAATCTCATCTTCATTTTAAAACTATAATCTTCTTCCTTCTCTATCCCATTTGAATCACTCAATTATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATCATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGTTAGCGATTTTGATTTTTTTTTTTTTTTTTTTTTTTGGGTTCTTCGTAATCTTCTTCTTTTCCATGGTTTCAAGATTTAGAGCAACTTGATCTATCGCTTGTTGATTTCGAGATTCAGTTGAGTTTTGACAAATTATATCATCTTGTGAATGTTATGCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAGCTAGCGTAGGGAAGGGTTTTCCCATGGCGTCCATGGAAGCTAAATCACCATGAAAGACTAACTTAACCTCTTGTGAAACCGAGTTTCATCGAATTGGTTTCTGACGAATAACTCATTTTCTTTCAAATTTCCCACGATCTTAGGAACTCTGTTTTGATTTCCTTTTTGTATGAATGTATGTAAAGTGAAAAGAGAAAAAGCATAGCAGTTCATATTTTGAATCGATTTCTGTTTGTTCATACAATTTGAATATCAGCAAATGGAGAGAGCATGAGAGTTTCTTTTTTTAAATAAAGTAATGGGAAAAATACAGATAAGAGTTTGGGGCAAACTGAAAAGGAATTGGTAATGAATGTGTCAATGTCATATAAAGCTGATGGACTAAAATGGCATTAGAAGTGTTTATGGGATTTTATCCAATTCAATCTAAAATTACAACTAATTGTTGTTTAATAGATTGAAGGAAAGGAAAAGTGGTCAATTTGGG

mRNA sequence

ATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATCATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAG

Coding sequence (CDS)

ATGTCAATTGCTCTGGAAACCAATACCGTTTTTTCTCAACCTGGATTGCCCTCTTACTGTTCTGTCTTGAATACCACCGGAATTATTCCGGTTGTTCGGCGAGAGGCGGCTCTTGCTGATGCGGTGGCGCCGGCGGATGTGGATAGATGTACTTCCTCTTCATCGTCCTCGATCGGAGAAAATAGTGGTTTCTCTGTACGATCATCGGATAATGACGATGGAGAGGATAATGAGGCGGAAAGTTCGTATAAAGGACCTCTAGGAATGGAGTCGTTGGAAGAAGTTCTGCCTATCAGGAGAGGAATTTCAAATTTCTATAACGGGAAATCGAAATCCTTCACAAGCCTAGTAGACGCTTCCTCCTCCTCCTCCATTAAAGACATAGCGAAGCCTGAAAACGCTTTCTCTCGAAAACGGAGGAATCTTCTTGCATCTAATCTAATCGCCGGCGGCATATCAAAGCGTCCGATTATTAGTTCAAGTCGAAGCTCGTTAGCGTTGGCCGTCGTCCTGAGCAGTTCTGAAATCCACAAAAATAACGATCTGAATTCAATATTACCTCCGCCGACGCTGATTCGTCCTCCATTGTACCCCAACGGGCGAGGATCTCGTATCAATTCAGGTTCTGCAGTTCCATCTCTCTGTAAATTCCCAACTTGGCGATCATACTCCATGGCCAATATACAGTAG

Protein sequence

MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ

Homology

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BLAST of CsaV3_6G031910 vs. NCBI nr
Match: XP_004144215.1 (PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hypothetical protein Csa_6G361410 [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 8.6e-118
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of CsaV3_6G031910 vs. NCBI nr
Match: XP_008445543.1 (PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo])

HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96
Identity = 196/234 (83.76%), Postives = 203/234 (86.75%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISS               
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSXXXXXXXXXXXXXXX 215

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
                DLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 216 XXXXXDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

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BLAST of CsaV3_6G031910 vs. NCBI nr
Match: XP_022962518.1 (uncharacterized protein LOC111462922 [Cucurbita moschata])

HSP 1 Score: 334.3 bits (856), Expect = 3.2e-88
Identity = 190/235 (80.85%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPAD-VDRCTSSS 60
           MSIALE+N     +VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+ VDRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           E     DLNS L P   IRPPL+P GR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERQSGEDLNSRLSP--TIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

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BLAST of CsaV3_6G031910 vs. NCBI nr
Match: XP_023547301.1 (uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.2 bits (853), Expect = 7.1e-88
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPAD-VDRCTSSS 60
           MSIALE+N     +VFSQ  LPSYCSVLNTTG+IPVVRR+A + D VAPA+ VDRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRRDAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  LGMESLEEVLPIRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLPIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           E     DLNS L P   IRPPL+P GR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERQSGEDLNSRLSP--TIRPPLHPKGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

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BLAST of CsaV3_6G031910 vs. NCBI nr
Match: XP_022997020.1 (uncharacterized protein LOC111492074 [Cucurbita maxima])

HSP 1 Score: 330.1 bits (845), Expect = 6.0e-87
Identity = 189/235 (80.43%), Postives = 202/235 (85.96%), Query Frame = 0


Query: 1   MSIALETN-----TVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPAD-VDRCTSSS 60
           MSIALE+N     +VFSQ  LPSYCSVLNTTG+IPVVRREA + D VAPA+ VDRC+SSS
Sbjct: 1   MSIALESNSRIPPSVFSQGVLPSYCSVLNTTGVIPVVRREAVVGDVVAPAEVVDRCSSSS 60

Query: 61  SSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFT 120
           SSSIGENS FSVRS ++DDGEDNEAESSYK  LGMESLEEVL IRRGISNFYNGKSKSFT
Sbjct: 61  SSSIGENSDFSVRSVNDDDGEDNEAESSYKESLGMESLEEVLSIRRGISNFYNGKSKSFT 120

Query: 121 SLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSS 180
           SL DASS+SSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISS  SSLALAV +SSS
Sbjct: 121 SLGDASSTSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSRGSSLALAVFMSSS 180

Query: 181 EIHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           E    + LNS L P   IRPPL+PNGR SR NSGSAVP LCKFPTWRSYS+ANIQ
Sbjct: 181 ERKSGDVLNSRLSP--TIRPPLHPNGRASRSNSGSAVPLLCKFPTWRSYSLANIQ 233

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BLAST of CsaV3_6G031910 vs. TAIR10
Match: AT3G43850.1 (unknown protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-22
Identity = 65/111 (58.56%), Postives = 81/111 (72.97%), Query Frame = 0


Query: 51  TSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYKGPLG-MESLEEVLPIRRGISNFYNGK 110
           +S+SS SIGEN       SD+D+G +NE ESSY GPL  MESLEE LPI+R IS FY GK
Sbjct: 23  SSTSSDSIGEN-------SDDDEGGENEIESSYNGPLDMMESLEEALPIKRAISKFYKGK 82

Query: 111 SKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIA-GGISKRPIIS 160
           SKSF SL + +SS  +KD+ KPEN +SR+RRNLL+  + + GGISK+P  S
Sbjct: 83  SKSFMSLSE-TSSLPVKDLTKPENLYSRRRRNLLSHRICSRGGISKKPFKS 125

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BLAST of CsaV3_6G031910 vs. TAIR10
Match: AT5G21940.1 (unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 4.5e-20
Identity = 69/171 (40.35%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 89  MESLEEVLPIRRGISNFYNGKSKSFTSLV-----DASSSSSIKDIAKPENAFSRKRRNLL 148
           MESLE+VLP+R+GIS +Y+GKSKSFT+L        +SSSS+KD+AKPEN +SR+RRNLL
Sbjct: 78  MESLEQVLPVRKGISKYYSGKSKSFTNLTAEAASALTSSSSMKDLAKPENPYSRRRRNLL 137

Query: 149 ASNL-------IAGGISKRPIISSSRSSLALAVVLSSSEIHKNNDLNSILPPPTLIR--- 208
              +         GGISK+ ++SSSRS+L LA                            
Sbjct: 138 CHQIWENNKTTPRGGISKKHVMSSSRSALTLAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 197

Query: 209 -----------------PPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMAN 228
                            PPLYP  +GS  N  S+  SL  F  WRS+S+A+
Sbjct: 198 XXXXXXXXXXXXXXXXLPPLYPRSQGSFGNLTSSQSSL-GFCAWRSFSVAD 247

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BLAST of CsaV3_6G031910 vs. TAIR10
Match: AT2G24550.1 (unknown protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-08
Identity = 32/63 (50.79%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 91  SLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAG 150
           SLE+ LPI+RG+SN Y GKSKSF +L++A+S +  KD+ K EN F+++RR ++A+ L   
Sbjct: 100 SLEDSLPIKRGLSNHYVGKSKSFGNLMEAASKA--KDLEKVENPFNKRRRLVIANKLRRR 159

Query: 151 GIS 154
           G S
Sbjct: 160 GRS 160

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BLAST of CsaV3_6G031910 vs. TAIR10
Match: AT4G31510.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-07
Identity = 28/57 (49.12%), Postives = 44/57 (77.19%), Query Frame = 0


Query: 91  SLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKRRNLLASNL 148
           SLE+ LPI+RG+SN Y GKSKSF +L++AS+++   D+ K E+  +++RR L+A+ L
Sbjct: 75  SLEDSLPIKRGLSNHYIGKSKSFGNLMEASNTN---DLVKVESPLNKRRRLLIANKL 128

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BLAST of CsaV3_6G031910 vs. TAIR10
Match: AT5G24890.1 (unknown protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 80  ESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKPENAFSRKR 139
           E   +G   M SLE+ LP +RG+SN Y GKSKSF +L       S+K++AK EN  +++R
Sbjct: 89  ELGLRGLASMSSLEDSLPSKRGLSNHYKGKSKSFGNL---GEIGSVKEVAKQENPLNKRR 148

Query: 140 RNLLASNL 148
           R  + + L
Sbjct: 149 RLQICNKL 153

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BLAST of CsaV3_6G031910 vs. TrEMBL
Match: tr|A0A0A0KFI7|A0A0A0KFI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 5.7e-118
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60
           MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE
Sbjct: 1   MSIALETNTVFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSSSSIGE 60

Query: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120
           NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS
Sbjct: 61  NSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTSLVDAS 120

Query: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180
           SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN
Sbjct: 121 SSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSEIHKNN 180

Query: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
           DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 181 DLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 229

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BLAST of CsaV3_6G031910 vs. TrEMBL
Match: tr|A0A1S3BCZ8|A0A1S3BCZ8_CUCME (uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.7e-96
Identity = 196/234 (83.76%), Postives = 203/234 (86.75%), Query Frame = 0


Query: 1   MSIALETNT-----VFSQPGLPSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE+NT     VFSQ GLP YCSVLNTTGIIPVVRREAA+ADAVAP DVDRC+SSSS
Sbjct: 36  MSIALESNTRIPPSVFSQAGLPPYCSVLNTTGIIPVVRREAAVADAVAPEDVDRCSSSSS 95

Query: 61  SSIGENSGFSVRSSDNDDGEDNEAESSYKGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 120
           SSIGENSGFSVRSSDNDDGEDNEAESSY+GPLGMESLEEVLPIRRGISNFYNGKSKSFTS
Sbjct: 96  SSIGENSGFSVRSSDNDDGEDNEAESSYRGPLGMESLEEVLPIRRGISNFYNGKSKSFTS 155

Query: 121 LVDASSSSSIKDIAKPENAFSRKRRNLLASNLIAGGISKRPIISSSRSSLALAVVLSSSE 180
           L DASSSSSIK+IAKPENAFSRKRRNLLASNLIAGGISKRPIISS               
Sbjct: 156 LADASSSSSIKEIAKPENAFSRKRRNLLASNLIAGGISKRPIISSXXXXXXXXXXXXXXX 215

Query: 181 IHKNNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
                DLNSI+PPPT IRPPL+PNGR SRINSGSAVPSLCKFPTWRSYSMANIQ
Sbjct: 216 XXXXXDLNSIIPPPTPIRPPLHPNGRASRINSGSAVPSLCKFPTWRSYSMANIQ 269

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BLAST of CsaV3_6G031910 vs. TrEMBL
Match: tr|A0A2R6QUN3|A0A2R6QUN3_ACTCH (Paternally-expressed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc12954 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33
Identity = 115/249 (46.18%), Postives = 150/249 (60.24%), Query Frame = 0


Query: 1   MSIALETNTV--FSQPGL---PSYCSVLNTTGIIPVVRREAALADAVAPADVDRCTSSSS 60
           MSIALE++T     + GL    S  SV ++  I    RR  A     A    +   SS  
Sbjct: 1   MSIALESSTSNRIERSGLRHGMSCGSVYDSPEIFSGDRRLTA-----AKKVEEVVESSXX 60

Query: 61  SSIGENSGFSVRSSD-NDDGEDNEAESSYKGPL-GMESLEEVLPIRRGISNFYNGKSKSF 120
            SIG NS  S   SD        E +SSYKGPL  +++LEEVLP++R IS FY GKSKSF
Sbjct: 61  XSIGRNSDLSGGESDXXXXXXXXEIQSSYKGPLDNLDALEEVLPMKRSISKFYCGKSKSF 120

Query: 121 TSLVDASSSSSIKDIAKPENAFSRKRRNLLASNLI------------AGGISKRPIISSS 180
           TSL DA S SS+K+I KPENA++RKR+NLLA +              +GG+SKRP  ++S
Sbjct: 121 TSLADAVSCSSVKEIVKPENAYTRKRKNLLAHSAFWDKNRNYPPRSTSGGLSKRP--ANS 180

Query: 181 RSSLALAVVLSSSEIHKNND-LNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTW 230
           RS+LALA +LSS E + N++  NS   PPTL RPPLYP+GR S  N  S+ P      +W
Sbjct: 181 RSTLALAAILSSCESNTNSENPNSNSSPPTLCRPPLYPHGRRSPNNESSSSPPQRTLSSW 240

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BLAST of CsaV3_6G031910 vs. TrEMBL
Match: tr|A5B5R8|A5B5R8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g02000 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32
Identity = 106/235 (45.11%), Postives = 139/235 (59.15%), Query Frame = 0


Query: 18  SYCSVLNTTGIIPVVRREAALADAVAPA-----DVDRCTSSSSSSIGENSGFSVRSSDND 77
           S  S+  +  ++   RR  A  +  A A     ++D C  SSSSSIG+NS  S  SSD +
Sbjct: 22  SCISIFESPELLTGDRRFPAGGEMAAKAEEREEELDSC--SSSSSIGKNSDVSGMSSDQE 81

Query: 78  DGEDNEAESSYKGPL-GMESLEEVLPIRRGISNFYNGKSKSFTSLVDASSSSSIKDIAKP 137
           D  + E +SSYK PL  M +LEEVLP+RRGIS FYNGKSKSFTSL DAS+S+S KD+AKP
Sbjct: 82  DSGETEVQSSYKRPLDSMNALEEVLPLRRGISRFYNGKSKSFTSLADASTSASCKDLAKP 141

Query: 138 ENAFSRKRRNLLASNLI------------AGGISKRPIISSSRSSLALAVVLSSSEIHK- 197
           ENA++R+RRNLLA N +             GGISK+ + ++SRS+LA             
Sbjct: 142 ENAYNRRRRNLLAYNHVLDKNRNFPLRSNGGGISKK-LAATSRSTLAXXXXXXXXXXXXX 201

Query: 198 ----NNDLNSILPPPTLIRPPLYPNGRGSRINSGSAVPSLCKFPTWRSYSMANIQ 230
               N+ LN I   P+L+ PPL+P  R    N  S+ P       WRSYS+A++Q
Sbjct: 202 XEDLNSSLNCISRSPSLLLPPLHPQARLYHNNVSSSPPQR-NLSAWRSYSLADLQ 252

[Close]

BLAST of CsaV3_6G031910 vs. TrEMBL
Match: tr|A0A068UYH5|A0A068UYH5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038433001 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-31
Identity = 108/208 (51.92%), Postives = 135/208 (64.90%), Query Frame = 0


Query: 50  CTSSSSSSIGENSGFSVRSSDNDDGEDNEAESSYK-GPL-GMESLEEVLPIRRGISNFYN 109
           C+SSS+SSIG+NS  S RS +N  G+  E +SSYK GPL  ME+LEEVLPIRRGIS+FYN
Sbjct: 67  CSSSSTSSIGKNSDVSGRSVEN-PGDSAEVQSSYKGGPLDAMEALEEVLPIRRGISSFYN 126

Query: 110 GKSKSFTSLVD-ASSSSSIKDIAKPENAFSRKRRNLLASNLI--------------AGGI 169
           GKSKSF SL D ASS+SSIKDI KPENA+ RKRRN LA +L               +GG+
Sbjct: 127 GKSKSFASLADAASSTSSIKDIGKPENAYIRKRRNQLACSLAWDSNKSRSSPLRSNSGGV 186

Query: 170 SKRPIISSSRSSLALAVVLSSSEI-HKNNDLNSILP-------PPTLIRPPLYPNGRGSR 229
           SKR +I+S R+SLALAV +SSS I H  N+  S  P       PP+L+    +   R   
Sbjct: 187 SKR-VINSGRTSLALAVTMSSSGIYHAKNENASPWPKDVISASPPSLLGACHHSQFRDYH 246

The following BLAST results are available for this feature:

BLAST of CsaV3_6G031910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144215.1	8.6e-118	100.00	PREDICTED: uncharacterized protein LOC101211014 [Cucumis sativus] >KGN47579.1 hy...	[more]
XP_008445543.1	4.1e-96	83.76	PREDICTED: uncharacterized protein LOC103488525 [Cucumis melo]	[more]
XP_022962518.1	3.2e-88	80.85	uncharacterized protein LOC111462922 [Cucurbita moschata]	[more]
XP_023547301.1	7.1e-88	80.43	uncharacterized protein LOC111806162 [Cucurbita pepo subsp. pepo]	[more]
XP_022997020.1	6.0e-87	80.43	uncharacterized protein LOC111492074 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G031910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43850.1	1.7e-22	58.56	unknown protein	[more]
AT5G21940.1	4.5e-20	40.35	unknown protein	[more]
AT2G24550.1	1.0e-08	50.79	unknown protein	[more]
AT4G31510.1	2.0e-07	49.12	unknown protein	[more]
AT5G24890.1	2.6e-07	42.65	unknown protein	[more]

BLAST of CsaV3_6G031910 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G031910 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFI7\|A0A0A0KFI7_CUCSA	5.7e-118	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361410 PE=4 SV=1	[more]
tr\|A0A1S3BCZ8\|A0A1S3BCZ8_CUCME	2.7e-96	83.76	uncharacterized protein LOC103488525 OS=Cucumis melo OX=3656 GN=LOC103488525 PE=...	[more]
tr\|A0A2R6QUN3\|A0A2R6QUN3_ACTCH	1.5e-33	46.18	Paternally-expressed protein OS=Actinidia chinensis var. chinensis OX=1590841 GN...	[more]
tr\|A5B5R8\|A5B5R8_VITVI	2.8e-32	45.11	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0008g02000 PE=4 SV=...	[more]
tr\|A0A068UYH5\|A0A068UYH5_COFCA	1.4e-31	51.92	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00038433001 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G031910.1	CsaV3_6G031910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..86
None	No IPR available	PANTHER	PTHR33172	FAMILY NOT NAMED	coord: 44..229
None	No IPR available	PANTHER	PTHR33172:SF6	SUBFAMILY NOT NAMED	coord: 44..229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G031910	CSPI06G19030	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G031910	Cucsa.055990	Cucumber (Gy14) v1	cgycucB044
CsaV3_6G031910	CmaCh05G004110	Cucurbita maxima (Rimu)	cmacucB0950
CsaV3_6G031910	CmoCh05G004230	Cucurbita moschata (Rifu)	cmocucB0937
CsaV3_6G031910	Cp4.1LG11g03510	Cucurbita pepo (Zucchini)	cpecucB0131
CsaV3_6G031910	CsGy6G018470	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G031910	Carg09313	Silver-seed gourd	carcucB0166
CsaV3_6G031910	Cla021964	Watermelon (97103) v1	cucwmB481
CsaV3_6G031910	MELO3C011491	Melon (DHL92) v3.5.1	cucmeB475
CsaV3_6G031910	ClCG08G009780	Watermelon (Charleston Gray)	cucwcgB514
CsaV3_6G031910	Lsi08G008290	Bottle gourd (USVL1VR-Ls)	cuclsiB500
CsaV3_6G031910	MELO3C011491.2	Melon (DHL92) v3.6.1	cucmedB465
CsaV3_6G031910	Cla97C08G152580	Watermelon (97103) v2	cucwmbB505
CsaV3_6G031910	Bhi04G001194	Wax gourd	cucwgoB606

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G031910	Silver-seed gourd	carcucB0154
CsaV3_6G031910	Cucurbita maxima (Rimu)	cmacucB0224
CsaV3_6G031910	Cucurbita moschata (Rifu)	cmocucB0213
CsaV3_6G031910	Cucurbita pepo (Zucchini)	cpecucB1036