CsaV3_UNG155170 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG155170
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionProtein phosphatase
Locationscaffold46 : 343801 .. 344679 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGAAGAGTGTCAATGAGAGCAGATCACCAAAATAAAATATATTCTCCACATATAAATATATATATATTCCATTTGCACATATAAATAACGATATCCTGCGTGAAGTTGGGTTAAACTTTTCAAAGCATTTCTTTTCAGACGAGACAGACAACCGGCGGAAGCCACCAAAAAAGAAGATTATATTCCGGATCGATTTTTCAATATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAATTTTCTAGCTTTTTTTCTTCTTTTCTTTATCGCATCCCATATGGTATATTATATTATTACTGGCGATGGTTTAATCCTTTCCTACACAATCAATTGAACATACTTCTTCACCTTACTCCTAATACTATCTATCAATTATCATCATAATACATCATTTATTTTATTTCAGCTTCTAAACTATAAACATTTCAACTAAATTTGAAATACCCAATTTAATTATCAAATTATTTATGCATCCATGTTTTCACTTATCATTATCCCAATTAAAAATCTCTCGTTTGCTCGTCCCCAGGCCCAGATTGTTGTTCTACGCTCTTCTACTTTTAATTATCTGCC

mRNA sequence

ATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAA

Coding sequence (CDS)

ATGGACCCTATCACATATGAGAGGATTACGCGGCGGCAGAGGCGGTCCTGCAGAGGCTTCCGGCTCACCTCCAGAAGACTGTCGGTGTCAAAGCTGCGGTCCAAATTCGGGTGGCTGTTGCGTATCTTAAATCGGTGGCGGCGCTCCATTGTTGAGATTAAGAAGAGCGGAACATCATCAAAAGGTTCTTCTAATTCAGCTGCGCAAGCTGCGAAGCTCAGGTCCTTCCGCCGCTCCAACTCCTTCTACGCCGAAGCCATTGCCGATTGCTTGGATTTCATCAAGACCACCTCCTCCTTCTCAACGCCTCCTTCCACTATACCTACACATACCTTCTAA

Protein sequence

MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF
Homology
[Close]
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match: KGN55589.1 (hypothetical protein Csa_3G000130 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 4.0e-52
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 113
           KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112

[Close]
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match: XP_022158286.1 (uncharacterized protein LOC111024807 [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 1.0e-18
Identity = 64/105 (60.95%), Postives = 76/105 (72.38%), Query Frame = 0 

Query: 1   MDPITYERI----TRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKS 60
           M+PI+YERI    +RR+ +S RGFRL SRR SVS+LR+KF  LLRILN+WRRS   IKK 
Sbjct: 78  MEPISYERIIGKGSRRRSQSARGFRLNSRRFSVSRLRAKFMCLLRILNKWRRS---IKKM 137

Query: 61  GTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFS 102
             S    +       +LRSFRRSNSFYAEA+ADCLDFIKT +S S
Sbjct: 138 RRSKAEVAEFPWCTDRLRSFRRSNSFYAEAMADCLDFIKTNTSSS 179

[Close]
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match: PRQ47164.1 (hypothetical protein RchiOBHm_Chr2g0096741 [Rosa chinensis])

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-10
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           M  ++Y R+     R+ RGFRL  RR SVS+LR++F    + L+RWR S +  + S TSS
Sbjct: 1   MGHMSYNRV--GNVRANRGFRLNPRRFSVSRLRTRFLCFFKFLSRWRCSCMR-RASTTSS 60

Query: 61  KGSSN-------------SAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTS 99
            GSS+             S     +LRS+ RSNSFYAEAIADCL+FIK +S
Sbjct: 61  NGSSSSRGLVRKKLQNKGSRVDCGRLRSYGRSNSFYAEAIADCLEFIKRSS 108

[Close]
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match: XP_007156267.1 (hypothetical protein PHAVU_003G272000g [Phaseolus vulgaris] >ESW28261.1 hypothetical protein PHAVU_003G272000g [Phaseolus vulgaris])

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-09
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVE-------- 60
           M  ++Y R+       CRGFRL  R+L V +LR +F + LR+    + S  E        
Sbjct: 1   MAHMSYSRVCSGNASRCRGFRLNPRKLYVLRLRKRFNFFLRVFQSCKLSYGEAIQVLKKV 60

Query: 61  -IKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIP 109
             +K G     ++N   +  K+ S  RSNSFYAEAIADCL+FIK TS+ S   S  P
Sbjct: 61  FCRKGGFKRNNTNNLVREDCKMGSCGRSNSFYAEAIADCLEFIKRTSTSSMDQSQDP 117

[Close]
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match: KZM98516.1 (hypothetical protein DCAR_014122 [Daucus carota subsp. sativus] >KZM98517.1 hypothetical protein DCAR_014121 [Daucus carota subsp. sativus])

HSP 1 Score: 69.3 bits (168), Expect = 9.4e-09
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0 

Query: 4   ITYERITRRQRRS----CRGFRLTSRRLSVSKLRSKFGWLLRILN-RWR------RSIVE 63
           + Y R+ R  RRS    CRGFRL +RR SV +LR+KF +L +IL+ RWR      R+I  
Sbjct: 5   LKYNRV-RDHRRSFHGPCRGFRLNARRFSVYRLRAKFYYLFKILSGRWRSWYKHARNICH 64

Query: 64  IKKSGTSSKGSSNSAAQAA--KLRSFRRSNSFYAEAIADCLDFIKTTS 99
             +   S +  S +A      +LRSF RSNSFY+EAIADCL+FIK +S
Sbjct: 65  SHRKKESREFVSRNAYPRVQNRLRSFGRSNSFYSEAIADCLEFIKRSS 111

[Close]
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match: tr|A0A0A0L3I7|A0A0A0L3I7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-52
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS
Sbjct: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60

Query: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 113
           KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF
Sbjct: 61  KGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIPTHTF 112

[Close]
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match: tr|A0A2P6RL53|A0A2P6RL53_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096741 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.5e-10
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKSGTSS 60
           M  ++Y R+     R+ RGFRL  RR SVS+LR++F    + L+RWR S +  + S TSS
Sbjct: 1   MGHMSYNRV--GNVRANRGFRLNPRRFSVSRLRTRFLCFFKFLSRWRCSCMR-RASTTSS 60

Query: 61  KGSSN-------------SAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTS 99
            GSS+             S     +LRS+ RSNSFYAEAIADCL+FIK +S
Sbjct: 61  NGSSSSRGLVRKKLQNKGSRVDCGRLRSYGRSNSFYAEAIADCLEFIKRSS 108

[Close]
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match: tr|A0A165XTS4|A0A165XTS4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014121 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-09
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0 

Query: 4   ITYERITRRQRRS----CRGFRLTSRRLSVSKLRSKFGWLLRILN-RWR------RSIVE 63
           + Y R+ R  RRS    CRGFRL +RR SV +LR+KF +L +IL+ RWR      R+I  
Sbjct: 5   LKYNRV-RDHRRSFHGPCRGFRLNARRFSVYRLRAKFYYLFKILSGRWRSWYKHARNICH 64

Query: 64  IKKSGTSSKGSSNSAAQAA--KLRSFRRSNSFYAEAIADCLDFIKTTS 99
             +   S +  S +A      +LRSF RSNSFY+EAIADCL+FIK +S
Sbjct: 65  SHRKKESREFVSRNAYPRVQNRLRSFGRSNSFYSEAIADCLEFIKRSS 111

[Close]
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match: tr|V7CH86|V7CH86_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G272000g PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-09
Identity = 46/117 (39.32%), Postives = 62/117 (52.99%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVE-------- 60
           M  ++Y R+       CRGFRL  R+L V +LR +F + LR+    + S  E        
Sbjct: 1   MAHMSYSRVCSGNASRCRGFRLNPRKLYVLRLRKRFNFFLRVFQSCKLSYGEAIQVLKKV 60

Query: 61  -IKKSGTSSKGSSNSAAQAAKLRSFRRSNSFYAEAIADCLDFIKTTSSFSTPPSTIP 109
             +K G     ++N   +  K+ S  RSNSFYAEAIADCL+FIK TS+ S   S  P
Sbjct: 61  FCRKGGFKRNNTNNLVREDCKMGSCGRSNSFYAEAIADCLEFIKRTSTSSMDQSQDP 117

[Close]
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match: tr|A0A1Q3CYT7|A0A1Q3CYT7_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-08
Identity = 47/124 (37.90%), Postives = 65/124 (52.42%), Query Frame = 0 

Query: 1   MDPITYERITRRQRRSCRGFRLTSRRLSVSKLRSKFGWLLRILNRWRRSIVEIKKS---- 60
           M  ++Y R+ RR     +GFRL SRR SV +LR++F +L R+L  WR S  +  KS    
Sbjct: 1   MAHVSYTRVGRRTCHETKGFRLNSRRFSVQRLRARFLYLFRLLRTWRSSCGQALKSLKRG 60

Query: 61  ---------------------GTSSKGSSN-SAAQAAKLRSFRRSNSFYAEAIADCLDFI 99
                                      ++N   A+  +LRSF RSNSFY++AIADCL+FI
Sbjct: 61  FCRNYXXXXXXXXXXXXXXXISVMDVPTNNMGRAECDRLRSFGRSNSFYSDAIADCLEFI 120

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG155170 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55589.14.0e-52100.00hypothetical protein Csa_3G000130 [Cucumis sativus][more]
XP_022158286.11.0e-1860.95uncharacterized protein LOC111024807 [Momordica charantia][more]
PRQ47164.13.8e-1045.95hypothetical protein RchiOBHm_Chr2g0096741 [Rosa chinensis][more]
XP_007156267.19.4e-0939.32hypothetical protein PHAVU_003G272000g [Phaseolus vulgaris] >ESW28261.1 hypothet... [more]
KZM98516.19.4e-0948.15hypothetical protein DCAR_014122 [Daucus carota subsp. sativus] >KZM98517.1 hypo... [more]
BLAST of CsaV3_UNG155170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG155170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_UNG155170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L3I7|A0A0A0L3I7_CUCSA2.7e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000130 PE=4 SV=1[more]
tr|A0A2P6RL53|A0A2P6RL53_ROSCH2.5e-1045.95Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0096741 PE=4... [more]
tr|A0A165XTS4|A0A165XTS4_DAUCA6.2e-0948.15Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_014121 ... [more]
tr|V7CH86|V7CH86_PHAVU6.2e-0939.32Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G272000g PE=4 ... [more]
tr|A0A1Q3CYT7|A0A1Q3CYT7_CEPFO1.8e-0837.90Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28853 PE=4... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG155170.1CsaV3_UNG155170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34996FAMILY NOT NAMEDcoord: 1..105

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_UNG155170CSPI03G00120Wild cucumber (PI 183967)cpicucB158
CsaV3_UNG155170CsGy3G000080Cucumber (Gy14) v2cgybcucB126
CsaV3_UNG155170Cla008960Watermelon (97103) v1cucwmB293
CsaV3_UNG155170MELO3C013706Melon (DHL92) v3.5.1cucmeB266
CsaV3_UNG155170ClCG10G000110Watermelon (Charleston Gray)cucwcgB274
CsaV3_UNG155170Lsi07G010360Bottle gourd (USVL1VR-Ls)cuclsiB264
CsaV3_UNG155170MELO3C013706.2Melon (DHL92) v3.6.1cucmedB261
CsaV3_UNG155170Cla97C10G184640Watermelon (97103) v2cucwmbB265
CsaV3_UNG155170Bhi11G000271Wax gourdcucwgoB359
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_UNG155170CsaV3_3G000130Cucumber (Chinese Long) v3cuccucB115
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG155170Cucumber (Gy14) v1cgycucB501