CsaV3_7G027320 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAATTGGTACTTTCACATGGTTAAACAAACTAAAAAGTCACTTTTGATAGTGTTTTTTAACCTTAAATCGTCTTTCACTAAGCTCTTGGGAGGTCATCCGTACAAAATCTTTCCAAACCTCACCATTTATGTAACGCCCAAAAGCGATTTTTTCAACTTTCTTCAAAGAAATTCTTCCCCCAAATCGGTGAGACTATGGACTCTTCTCGCTTTCTCAATCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTAAGATCTCCGTTTCCTTTCACTAAAAACATACACTAATACTCTTCAACCACGCTACAAAATTAGATCAAAATCATCTCGTAGTCTCACAACCGATTCACGTTTTCTCCTGGACATTTTCATAAACACCTCGACGCATTTACATTTTCATTAGTTTTTCTCTTTTCTTTTTAACGTAATCGATCGGACGGATTAAGACCCATTTTCAGTCCAGGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTTGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAGTGACTTAGTTTCACGAGACAACCCTTCCTTGCTCGTAGTAAATAAATGTTGTAAGATTAGATGGGTTGTTTGGTTGTTCAACAAGTTGATAGTCTTTGTCAATGAATGTTTGACTAGCTCGGATCGAAGGAAAACATCCTAAAGTGTAGAAGGAACTCTTTTGTATATATTTTCTTTATCTATACTTGTTTTGATCAAACTTATGCTTATTTTGATTAATCTTACAAACAACGGAGACGGATTACTTTGAATTTGACTAACCATTTCAATTTTAGTTTTTAGTTTTTGAACATTAAAACTTGTAAACAACTCTTTTACCACTAATCTTGTAGCTTTGTTTTCTTTTATAATAATGGTAAAA ATGGACTCTTCTCGCTTTCTCAATCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTTGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAG ATGGACTCTTCTCGCTTTCTCAATCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTTGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAG MDSSRFLNLLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN
BLAST of CsaV3_7G027320 vs. NCBI nr
Match: XP_004148954.1 (PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_7G375760 [Cucumis sativus]) HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. NCBI nr
Match: XP_008451248.2 (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]) HSP 1 Score: 249.6 bits (636), Expect = 6.8e-63 Identity = 137/150 (91.33%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. NCBI nr
Match: XP_022143602.1 (uncharacterized protein LOC111013459 [Momordica charantia]) HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54 Identity = 120/153 (78.43%), Postives = 129/153 (84.31%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. NCBI nr
Match: XP_022991546.1 (uncharacterized protein LOC111488125 [Cucurbita maxima]) HSP 1 Score: 207.6 bits (527), Expect = 3.0e-50 Identity = 114/151 (75.50%), Postives = 119/151 (78.81%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. NCBI nr
Match: XP_022953859.1 (uncharacterized protein LOC111456270 [Cucurbita moschata]) HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49 Identity = 115/155 (74.19%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TAIR10
Match: AT2G20515.1 (unknown protein) HSP 1 Score: 134.8 bits (338), Expect = 4.4e-32 Identity = 73/141 (51.77%), Postives = 100/141 (70.92%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TAIR10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 47.4 bits (111), Expect = 9.3e-06 Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TrEMBL
Match: tr|A0A0A0K735|A0A0A0K735_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1) HSP 1 Score: 293.1 bits (749), Expect = 3.6e-76 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TrEMBL
Match: tr|A0A1S3BQF6|A0A1S3BQF6_CUCME (uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.5e-63 Identity = 137/150 (91.33%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TrEMBL
Match: tr|M5VHK4|M5VHK4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G223500 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.0e-39 Identity = 87/145 (60.00%), Postives = 115/145 (79.31%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TrEMBL
Match: tr|A0A2N9HPA6|A0A2N9HPA6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41422 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.7e-38 Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 0
BLAST of CsaV3_7G027320 vs. TrEMBL
Match: tr|D7U301|D7U301_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_07s0005g03390 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 8.6e-38 Identity = 86/155 (55.48%), Postives = 115/155 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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