CmoCh17G013090 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTAAGATCTCCATTTCCTTTTTCTAAAAAATACACGTTCAAACACACTAATTCTTCTGAGAGGCTGCAGAGTTAGGTCGAAATCCTCTCATTAGCTCTAAATCGATTGAGATTTTCTCGTAGACATTTTCACAAACACATCGACGCATAAGCTTTTTTTTTTTTTTCTTTTACGTAATCGATCGGACTGAGAATGGTTCGATTATTTGAGGCGCCCAGGTTTTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCATTGGCAGATGAGGAAGAGGAAGAGGAGGCGTTTGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACGCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGCCTTCGCTAACGAGTCCTGTAATTAG ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTTTTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCATTGGCAGATGAGGAAGAGGAAGAGGAGGCGTTTGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACGCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGCCTTCGCTAACGAGTCCTGTAATTAG ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCGTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTTTTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCATTGGCAGATGAGGAAGAGGAAGAGGAGGCGTTTGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACGCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCAACGCTTTGCCTTCGCTAACGAGTCCTGTAATTAG
BLAST of CmoCh17G013090 vs. TrEMBL
Match: A0A0A0K735_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375760 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 3.6e-54 Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 1
BLAST of CmoCh17G013090 vs. TrEMBL
Match: B9H8M4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24600g PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.4e-42 Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = 1
BLAST of CmoCh17G013090 vs. TrEMBL
Match: M5VHK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018256mg PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.5e-41 Identity = 87/145 (60.00%), Postives = 115/145 (79.31%), Query Frame = 1
BLAST of CmoCh17G013090 vs. TrEMBL
Match: B9GS12_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03930g PE=4 SV=2) HSP 1 Score: 172.6 bits (436), Expect = 3.8e-40 Identity = 86/149 (57.72%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CmoCh17G013090 vs. TrEMBL
Match: D7U301_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03390 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.6e-40 Identity = 89/157 (56.69%), Postives = 121/157 (77.07%), Query Frame = 1
BLAST of CmoCh17G013090 vs. TAIR10
Match: AT2G20515.1 (AT2G20515.1 unknown protein) HSP 1 Score: 142.5 bits (358), Expect = 2.2e-34 Identity = 76/150 (50.67%), Postives = 111/150 (74.00%), Query Frame = 1
BLAST of CmoCh17G013090 vs. NCBI nr
Match: gi|449462451|ref|XP_004148954.1| (PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus]) HSP 1 Score: 219.2 bits (557), Expect = 5.1e-54 Identity = 122/155 (78.71%), Postives = 130/155 (83.87%), Query Frame = 1
BLAST of CmoCh17G013090 vs. NCBI nr
Match: gi|659100748|ref|XP_008451248.1| (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]) HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51 Identity = 120/154 (77.92%), Postives = 127/154 (82.47%), Query Frame = 1
BLAST of CmoCh17G013090 vs. NCBI nr
Match: gi|224085635|ref|XP_002307644.1| (hypothetical protein POPTR_0005s24600g [Populus trichocarpa]) HSP 1 Score: 180.6 bits (457), Expect = 2.0e-42 Identity = 91/149 (61.07%), Postives = 117/149 (78.52%), Query Frame = 1
BLAST of CmoCh17G013090 vs. NCBI nr
Match: gi|743920047|ref|XP_011004061.1| (PREDICTED: uncharacterized protein LOC105110658 [Populus euphratica]) HSP 1 Score: 179.5 bits (454), Expect = 4.5e-42 Identity = 90/149 (60.40%), Postives = 117/149 (78.52%), Query Frame = 1
BLAST of CmoCh17G013090 vs. NCBI nr
Match: gi|743839581|ref|XP_011025980.1| (PREDICTED: uncharacterized protein LOC105126722 [Populus euphratica]) HSP 1 Score: 179.1 bits (453), Expect = 5.9e-42 Identity = 90/149 (60.40%), Postives = 116/149 (77.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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