Cp4.1LG12g10300 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pollen Ole e I family allergen
Location	Cp4.1LG12 : 9455603 .. 9456622 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTAAAACTCACAAAGATCCCATCCCCACTTTTGCAGTGCCCAAAAAGCGGGACAAAGTTTTTGAAACTTTCTTGAAGAAATCCGAAGGAAACACTCCCCCAAATCGGAGACCAAGACAATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCCTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTAAGATCTCCATTTCCTTTTTCTAAAAAATACACGTTCAAACACACTAATTCTTCTGAGAGGCTGCAGAGTTAGGTCGAAATCCTCTCGTAAGCTCTAAATCGATTGAGATTTTCTCGTAGACATTTTCACAAACACATCGACGCATGAGTTTTTTTTTTTTTTACGTAATCGATCGGATTGAGACTGGTTCGATTATTTGAGGCGTCCAGGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCAGTGGCGGATGAGGAAGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACTCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCACCGCTTTGCCTTCGCTAATGAGTCCTGTAATTAGCATCTCATCATCAAACAACCCAACCGCTCTTGCTCTTTGCTTGATCTTGATTTGAATTTCAAAATTTTTGGTAATGTTGGAGGGTTAGATAGATGGTTGTCTAGATTAACAAGTTGATAATCTTTATCGACAAATGTTTGAATTTAATTCTAACTATGGTATGATTTTGTGTTTAGAATCGAAAGAGAATGATGAAACAGAATTTTGAAGTGATTTTCAACTT

mRNA sequence

ATTTAAAACTCACAAAGATCCCATCCCCACTTTTGCAGTGCCCAAAAAGCGGGACAAAGTTTTTGAAACTTTCTTGAAGAAATCCGAAGGAAACACTCCCCCAAATCGGAGACCAAGACAATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCCTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCAGTGGCGGATGAGGAAGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACTCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCACCGCTTTGCCTTCGCTAATGAGTCCTGTAATTAGCATCTCATCATCAAACAACCCAACCGCTCTTGCTCTTTGCTTGATCTTGATTTGAATTTCAAAATTTTTGGTAATGTTGGAGGGTTAGATAGATGGTTGTCTAGATTAACAAGTTGATAATCTTTATCGACAAATGTTTGAATTTAATTCTAACTATGGTATGATTTTGTGTTTAGAATCGAAAGAGAATGATGAAACAGAATTTTGAAGTGATTTTCAACTT

Coding sequence (CDS)

ATGGAGACTTTTCGCTTACTCAGTTATCTTCTCCTTCTCTACTTCGCCACCGCCGCCGCAGGAGAAGCTGCATTATCGCGCCCTCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTCCAGAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCTCGGATGGCGCCGGAATCGGCGACGGTGGCGAAGATTTTCGGATCGAGAGCTCACGAACGGTACGGATCTGAGATGACATTACTGGCGGCGGCGACGGTGGCAGTGGCGGATGAGGAAGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACCGCAGCACTGTTGAATTCGTATGCAAGAAGGGATTTCCCATACTCAGCTTGGGAGGTGAAAACATTGCTCATCAAAGCATTGGTATCTAAAGAGGCTGCTGCTCTTCAATCTCACCGCTTTGCCTTCGCTAATGAGTCCTGTAATTAG

Protein sequence

METFRLLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN

Homology

[Close]

BLAST of Cp4.1LG12g10300 vs. TrEMBL
Match: A0A0A0K735_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375760 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-53
Identity = 121/155 (78.06%), Postives = 128/155 (82.58%), Query Frame = 1


Query: 1   METFRLLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
           M++ R L+ LLLL FA A A E A +R PGFLFSRT GRCT +FWSSR EAWPRMAPESA
Sbjct: 1   MDSSRFLNLLLLLCFAAATA-EVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESA 60

Query: 61  TVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRD-FP 120
           TVAKIFGSRAHERYGSEMTL+ AA  A    +EEEE FGRVVKEATAALLNSY RR  FP
Sbjct: 61  TVAKIFGSRAHERYGSEMTLMEAAAGA---GDEEEEVFGRVVKEATAALLNSYTRRRVFP 120

Query: 121 YSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN 155
           YSAWEVKTL IKALVSKEAA LQS RFAFANESCN
Sbjct: 121 YSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of Cp4.1LG12g10300 vs. TrEMBL
Match: B9H8M4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24600g PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.1e-42
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           LLS L+L+ F    A   A +  PGF++SRTRGRCTP+FWSSRRE+WPRM P+ ATV+K+
Sbjct: 6   LLSRLVLIIFVAHFAASKAAATRPGFIYSRTRGRCTPQFWSSRRESWPRMVPQRATVSKV 65

Query: 66  FGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEV 125
           FGS   ERYGS++TLL + T       ++E AF  ++K+A+AALLNSYAR  FPYSAWEV
Sbjct: 66  FGSGVFERYGSDVTLLESTT-----RNDDENAFAGLLKQASAALLNSYAREGFPYSAWEV 125

Query: 126 KTLLIKALVSKEAAALQSHRFAFANESCN 155
           KTLLI+ALVSKEAAA Q+ +F+ ANE+CN
Sbjct: 126 KTLLIQALVSKEAAATQAKQFSVANEACN 149

[Close]

BLAST of Cp4.1LG12g10300 vs. TrEMBL
Match: M5VHK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018256mg PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.3e-40
Identity = 86/145 (59.31%), Postives = 113/145 (77.93%), Query Frame = 1


Query: 10  LLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKIFGSR 69
           LLLL  A +     A ++ PGFLF+RT GRCTP +W SRREAWPRM P+++TV+K+FGSR
Sbjct: 12  LLLLLIACSVPSTTAKTQRPGFLFTRTTGRCTPHYWGSRREAWPRMVPQTSTVSKVFGSR 71

Query: 70  AHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEVKTLL 129
           A+ERY S++TLL A         +EE  + R++K+A+AALLNSYAR+ FPYSAWEVKTL+
Sbjct: 72  AYERYRSDLTLLEATV-----RNDEENVYPRLLKQASAALLNSYARKGFPYSAWEVKTLV 131

Query: 130 IKALVSKEAAALQSHRFAFANESCN 155
           I+ALVS +AAALQ+ RF+ ANE+C+
Sbjct: 132 IQALVSDKAAALQAQRFSVANEACH 151

[Close]

BLAST of Cp4.1LG12g10300 vs. TrEMBL
Match: B9GS12_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03930g PE=4 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 8.6e-40
Identity = 86/149 (57.72%), Postives = 113/149 (75.84%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           LLS L+L+ F    A    ++  PGFL++RTRGRCTP+FWSSRREAWPRM P+ +TV+K+
Sbjct: 11  LLSRLVLIIFVAHFAASKVVATRPGFLYTRTRGRCTPQFWSSRREAWPRMVPQRSTVSKV 70

Query: 66  FGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEV 125
           FGS   ERY S++TLL +         ++E AF  ++K+A+AALLN+YAR+ FPYSAWEV
Sbjct: 71  FGSGVFERYRSDVTLLES-----TGRNDDENAFAGLLKQASAALLNTYARKGFPYSAWEV 130

Query: 126 KTLLIKALVSKEAAALQSHRFAFANESCN 155
           KTL I+ALVSKEAAA Q+ +F+ ANE+CN
Sbjct: 131 KTLFIQALVSKEAAATQAKQFSIANEACN 154

[Close]

BLAST of Cp4.1LG12g10300 vs. TrEMBL
Match: D7U301_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03390 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39
Identity = 89/157 (56.69%), Postives = 119/157 (75.80%), Query Frame = 1


Query: 1   METFRLLSYLLLLYFATAAAGEAALSRP---PGFLFSRTRGRCTPEFWSSRREAWPRMAP 60
           ME+   LS L+L+ F +  A  A  ++    PGFL++R+RGRCTP++W SR+EAWPRM P
Sbjct: 1   MESSAPLSTLVLILFLSCFAVTATAAQTQWRPGFLYTRSRGRCTPQYWGSRKEAWPRMVP 60

Query: 61  ESATVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRD 120
           +++TVAK+FGSRA ER+ S+MTLL     A A +E  E  F  ++K+ +AAL+NSYAR+ 
Sbjct: 61  QTSTVAKVFGSRASERFRSDMTLLE----ATAQDESVENVFHGLLKQTSAALINSYARKG 120

Query: 121 FPYSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN 155
           FPYSAWEVKTLLI+ALVS+EAAALQ+  F+ ANE+CN
Sbjct: 121 FPYSAWEVKTLLIQALVSEEAAALQAEHFSIANEACN 153

[Close]

BLAST of Cp4.1LG12g10300 vs. TAIR10
Match: AT2G20515.1 (AT2G20515.1 unknown protein)

HSP 1 Score: 141.7 bits (356), Expect = 3.7e-34
Identity = 75/150 (50.00%), Postives = 110/150 (73.33%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           L+++ LL +FA    G+++ +RP GF+++R RGRCTP++WSS+REAWPRM PE +TV KI
Sbjct: 15  LVTFFLLCFFA----GDSSATRP-GFIYTRHRGRCTPQYWSSQREAWPRMVPERSTVEKI 74

Query: 66  FGSR-AHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWE 125
           FG   A ER+ S++TL+ +     A  +EE  A+G ++K+  AAL+NSYAR+ F Y+ WE
Sbjct: 75  FGVMVAKERWRSDLTLVEST----ARNDEEGNAYGALLKQGIAALINSYARKSFSYAPWE 134

Query: 126 VKTLLIKALVSKEAAALQSHRFAFANESCN 155
           VKT+LI+A+VS+ AA  Q+  FA AN +C+
Sbjct: 135 VKTMLIQAMVSESAARRQAEHFAVANVACD 155

[Close]

BLAST of Cp4.1LG12g10300 vs. NCBI nr
Match: gi|449462451|ref|XP_004148954.1| (PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-53
Identity = 121/155 (78.06%), Postives = 128/155 (82.58%), Query Frame = 1


Query: 1   METFRLLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
           M++ R L+ LLLL FA A A E A +R PGFLFSRT GRCT +FWSSR EAWPRMAPESA
Sbjct: 1   MDSSRFLNLLLLLCFAAATA-EVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESA 60

Query: 61  TVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRD-FP 120
           TVAKIFGSRAHERYGSEMTL+ AA  A    +EEEE FGRVVKEATAALLNSY RR  FP
Sbjct: 61  TVAKIFGSRAHERYGSEMTLMEAAAGA---GDEEEEVFGRVVKEATAALLNSYTRRRVFP 120

Query: 121 YSAWEVKTLLIKALVSKEAAALQSHRFAFANESCN 155
           YSAWEVKTL IKALVSKEAA LQS RFAFANESCN
Sbjct: 121 YSAWEVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of Cp4.1LG12g10300 vs. NCBI nr
Match: gi|659100748|ref|XP_008451248.1| (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 9.7e-53
Identity = 121/154 (78.57%), Postives = 127/154 (82.47%), Query Frame = 1


Query: 1   METFRLLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESA 60
           M++   L+ LLLL FA AA  E A +RPPGFLFSRT GRCT +FWSSR EAWPRMAPESA
Sbjct: 33  MDSSPFLTLLLLLSFAAAA--EVASARPPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESA 92

Query: 61  TVAKIFGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYA-RRDFP 120
           TVAKIFGSRA ERYGSEMTL+ AA  A      EEE FGRVVKEATAALLNSYA RRDFP
Sbjct: 93  TVAKIFGSRARERYGSEMTLMEAAGGA------EEEVFGRVVKEATAALLNSYARRRDFP 152

Query: 121 YSAWEVKTLLIKALVSKEAAALQSHRFAFANESC 154
           YSAWEVKTLLIKALVSKEAA LQS RFAFANESC
Sbjct: 153 YSAWEVKTLLIKALVSKEAAVLQSQRFAFANESC 178

[Close]

BLAST of Cp4.1LG12g10300 vs. NCBI nr
Match: gi|224085635|ref|XP_002307644.1| (hypothetical protein POPTR_0005s24600g [Populus trichocarpa])

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-42
Identity = 91/149 (61.07%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           LLS L+L+ F    A   A +  PGF++SRTRGRCTP+FWSSRRE+WPRM P+ ATV+K+
Sbjct: 6   LLSRLVLIIFVAHFAASKAAATRPGFIYSRTRGRCTPQFWSSRRESWPRMVPQRATVSKV 65

Query: 66  FGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEV 125
           FGS   ERYGS++TLL + T       ++E AF  ++K+A+AALLNSYAR  FPYSAWEV
Sbjct: 66  FGSGVFERYGSDVTLLESTT-----RNDDENAFAGLLKQASAALLNSYAREGFPYSAWEV 125

Query: 126 KTLLIKALVSKEAAALQSHRFAFANESCN 155
           KTLLI+ALVSKEAAA Q+ +F+ ANE+CN
Sbjct: 126 KTLLIQALVSKEAAATQAKQFSVANEACN 149

[Close]

BLAST of Cp4.1LG12g10300 vs. NCBI nr
Match: gi|743920047|ref|XP_011004061.1| (PREDICTED: uncharacterized protein LOC105110658 [Populus euphratica])

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41
Identity = 90/149 (60.40%), Postives = 115/149 (77.18%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           LLS L+L+ F    A   A +  PGF+++RTRGRCTP+FWSSRRE+WPRM P+ ATV+K+
Sbjct: 6   LLSRLVLIIFVAHFAASKAAATRPGFIYTRTRGRCTPQFWSSRRESWPRMVPQRATVSKV 65

Query: 66  FGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEV 125
           FGS   ERYGS++TLL + T       ++E AF  ++K+A+AALLNSYAR  FPYSAWEV
Sbjct: 66  FGSGVFERYGSDVTLLESTT-----RNDDENAFAGLLKQASAALLNSYAREGFPYSAWEV 125

Query: 126 KTLLIKALVSKEAAALQSHRFAFANESCN 155
           KTLLI+ALVSKEAAA Q+ +F+ ANE+CN
Sbjct: 126 KTLLIQALVSKEAAAAQAKQFSVANEACN 149

[Close]

BLAST of Cp4.1LG12g10300 vs. NCBI nr
Match: gi|743839581|ref|XP_011025980.1| (PREDICTED: uncharacterized protein LOC105126722 [Populus euphratica])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-41
Identity = 90/149 (60.40%), Postives = 114/149 (76.51%), Query Frame = 1


Query: 6   LLSYLLLLYFATAAAGEAALSRPPGFLFSRTRGRCTPEFWSSRREAWPRMAPESATVAKI 65
           LLS LLL+ F    A   A +  PGF+++RTRGRCTP+FWSSRRE+WPRM P+ ATV+K+
Sbjct: 6   LLSRLLLIIFVAHFAASKAAATRPGFIYTRTRGRCTPQFWSSRRESWPRMVPQRATVSKV 65

Query: 66  FGSRAHERYGSEMTLLAAATVAVADEEEEEEAFGRVVKEATAALLNSYARRDFPYSAWEV 125
           FGS   ERYGS++TLL + T       ++E AF  ++K+A+AALLNSYAR  FPYSAWEV
Sbjct: 66  FGSGVFERYGSDVTLLESTT-----RNDDENAFAGLLKQASAALLNSYAREGFPYSAWEV 125

Query: 126 KTLLIKALVSKEAAALQSHRFAFANESCN 155
           KTLLI+ALVSKEAAA Q+ +F+  NE+CN
Sbjct: 126 KTLLIQALVSKEAAAAQAKQFSVTNEACN 149

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g10300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K735_CUCSA	1.8e-53	78.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375760 PE=4 SV=1	[more]
B9H8M4_POPTR	3.1e-42	61.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24600g PE=4 SV=1	[more]
M5VHK4_PRUPE	2.3e-40	59.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018256mg PE=4 SV=1	[more]
B9GS12_POPTR	8.6e-40	57.72	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s03930g PE=4 SV=2	[more]
D7U301_VITVI	1.1e-39	56.69	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03390 PE=4 SV=...	[more]

BLAST of Cp4.1LG12g10300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20515.1	3.7e-34	50.00	unknown protein	[more]

BLAST of Cp4.1LG12g10300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462451\|ref\|XP_004148954.1\|	2.5e-53	78.06	PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus]	[more]
gi\|659100748\|ref\|XP_008451248.1\|	9.7e-53	78.57	PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]	[more]
gi\|224085635\|ref\|XP_002307644.1\|	4.5e-42	61.07	hypothetical protein POPTR_0005s24600g [Populus trichocarpa]	[more]
gi\|743920047\|ref\|XP_011004061.1\|	1.0e-41	60.40	PREDICTED: uncharacterized protein LOC105110658 [Populus euphratica]	[more]
gi\|743839581\|ref\|XP_011025980.1\|	1.3e-41	60.40	PREDICTED: uncharacterized protein LOC105126722 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10300.1	Cp4.1LG12g10300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33210	FAMILY NOT NAMED	coord: 31..153 score: 5.7
None	No IPR available	PANTHER	PTHR33210:SF5	SUBFAMILY NOT NAMED	coord: 31..153 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10300	Cucsa.388470	Cucumber (Gy14) v1	cgycpeB1027
Cp4.1LG12g10300	CmaCh17G013460	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10300	CmoCh17G013090	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10300	Cla014836	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g10300	Csa7G375760	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g10300	MELO3C015729	Melon (DHL92) v3.5.1	cpemeB120
Cp4.1LG12g10300	ClCG09G007810	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g10300	CSPI07G15550	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g10300	Lsi02G022080	Bottle gourd (USVL1VR-Ls)	cpelsiB111
Cp4.1LG12g10300	MELO3C015729.2	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g10300	CsaV3_7G027320	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g10300	Bhi09G000971	Wax gourd	cpewgoB0209
Cp4.1LG12g10300	CsGy7G014050	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g10300	Carg11520	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10300	Cucurbita pepo (Zucchini)	cpecpeB173
Cp4.1LG12g10300	Cucurbita moschata (Rifu)	cmocpeB834