CSPI07G15550 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G15550
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pollen Ole e I family allergen
Location	Chr7 : 14179069 .. 14180095 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTTTTTTAACCTTAAATCGTTTTTCACTAAGCTCTTGGGAGGTCATCCGTACAAAATCTTTCCAAACCTCACCATTTATGTAACGCCCAAAAGCGATTTTTTCAACTTTTTTCGAAGAAATTCTTCCCCCAAATCGGTGAGACTATGAACTCTTCTCGCTTTCTCATTCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTAAGATCTCCATTTCCTTTCACTAAAAACATACACTAATACTCTTCAACCACGCTACAAAATTAGATCAAAATCATCTCGTAGTCTCACAACCGATTCACGTTTTCTCCTGGACATTTTCATAAACACCTCGACGCATTTACATTTTCATTAGTTTTTCTCTTTTCTTTTTACCGTAATCGATCGGACGGATTAAGACCCATTTTCAGTCCAGGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTCGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAGTGACTTAGTTTCACGAGACAACCCTCGATAGTAAATAAATGTTGGAAGATTAGATGGGTTATTTCGTTGTTCAACACGTTGATAATCTTTGTCAATGAATGTTTGACTAGCTCGGATCCAAGGAAAACAACCTAAAGTGAAAAGTATAAAGTAGAAGGAACTCTTTTGTATATATTTTCTTTATCTATGCTTGTTTTGATCAAACTTCCGC

mRNA sequence

ATGAACTCTTCTCGCTTTCTCATTCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTCGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAG

Coding sequence (CDS)

ATGAACTCTTCTCGCTTTCTCATTCTCCTTCTCCTTCTCTGTTTCGCTGCCGCCACCGCAGAAGTAGCATCAGCGCGCCGCCCTGGATTTCTCTTCTCAAGAACTACAGGAAGATGCACTGCGCAGTTCTGGAGCAGTAGGAGTGAGGCTTGGCCACGGATGGCGCCGGAATCCGCTACAGTGGCGAAAATTTTCGGATCGAGAGCTCATGAACGGTATGGATCTGAGATGACGTTAATGGAAGCGGCGGCGGGTGCCGGGGATGAGGAAGAGGAGGTTTTCGGTAGAGTAGTGAAGGAAGCAACTGCAGCATTGTTGAATTCGTATACTAGAAGAAGGGTTTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGTTCTTCAGTCTCAACGTTTTGCTTTTGCTAATGAGTCTTGTAATTAG

Homology

[Close]

BLAST of CSPI07G15550 vs. TrEMBL
Match: A0A0A0K735_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375760 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.4e-74
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 1


Query: 1   MNSSRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
           M+SSRFL LLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT
Sbjct: 1   MDSSRFLNLLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60

Query: 61  VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120
           VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW
Sbjct: 61  VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120

Query: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 152
           EVKTLFIKALVSKEAAVLQSQRFAFANESCN
Sbjct: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of CSPI07G15550 vs. TrEMBL
Match: M5VHK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018256mg PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.8e-40
Identity = 87/145 (60.00%), Postives = 116/145 (80.00%), Query Frame = 1


Query: 7   LILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFG 66
           L+LLLLL   +  +  A  +RPGFLF+RTTGRCT  +W SR EAWPRM P+++TV+K+FG
Sbjct: 10  LVLLLLLIACSVPSTTAKTQRPGFLFTRTTGRCTPHYWGSRREAWPRMVPQTSTVSKVFG 69

Query: 67  SRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVKTLF 126
           SRA+ERY S++TL+EA     ++EE V+ R++K+A+AALLNSY R+  FPYSAWEVKTL 
Sbjct: 70  SRAYERYRSDLTLLEAT--VRNDEENVYPRLLKQASAALLNSYARKG-FPYSAWEVKTLV 129

Query: 127 IKALVSKEAAVLQSQRFAFANESCN 152
           I+ALVS +AA LQ+QRF+ ANE+C+
Sbjct: 130 IQALVSDKAAALQAQRFSVANEACH 151

[Close]

BLAST of CSPI07G15550 vs. TrEMBL
Match: D7U301_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03390 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-38
Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 1


Query: 4   SRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAK 63
           S  +++L L CFA       +  RPGFL++R+ GRCT Q+W SR EAWPRM P+++TVAK
Sbjct: 8   STLVLILFLSCFAVTATAAQTQWRPGFLYTRSRGRCTPQYWGSRKEAWPRMVPQTSTVAK 67

Query: 64  IFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVK 123
           +FGSRA ER+ S+MTL+EA A   +  E VF  ++K+ +AAL+NSY R+  FPYSAWEVK
Sbjct: 68  VFGSRASERFRSDMTLLEATA-QDESVENVFHGLLKQTSAALINSYARKG-FPYSAWEVK 127

Query: 124 TLFIKALVSKEAAVLQSQRFAFANESCN 152
           TL I+ALVS+EAA LQ++ F+ ANE+CN
Sbjct: 128 TLLIQALVSEEAAALQAEHFSIANEACN 153

[Close]

BLAST of CSPI07G15550 vs. TrEMBL
Match: B9SF38_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1213590 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-37
Identity = 86/150 (57.33%), Postives = 114/150 (76.00%), Query Frame = 1


Query: 2   NSSRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATV 61
           + S FL++L+L CFA    E ASA RP FLF+RT GRCTAQ+WSSR EAWPRM P+++TV
Sbjct: 3   SKSYFLVILILACFAV---ETASASRPAFLFTRTRGRCTAQYWSSRREAWPRMVPQTSTV 62

Query: 62  AKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWE 121
           + +FGSR  ERY S +TL+E+   A +++E VF  ++K+A AALLNSY R+  F YSAWE
Sbjct: 63  SNVFGSRIFERYRSGLTLLEST--ARNDDENVFVGLLKQAIAALLNSYARKE-FAYSAWE 122

Query: 122 VKTLFIKALVSKEAAVLQSQRFAFANESCN 152
           VKTLFI+ LVS+ AA   +++F+ ANE+CN
Sbjct: 123 VKTLFIQGLVSEGAAAKLAKQFSIANEACN 146

[Close]

BLAST of CSPI07G15550 vs. TrEMBL
Match: B9H8M4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24600g PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-37
Identity = 84/148 (56.76%), Postives = 114/148 (77.03%), Query Frame = 1


Query: 4   SRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAK 63
           SR ++++ +  FAA+ A   +A RPGF++SRT GRCT QFWSSR E+WPRM P+ ATV+K
Sbjct: 8   SRLVLIIFVAHFAASKA---AATRPGFIYSRTRGRCTPQFWSSRRESWPRMVPQRATVSK 67

Query: 64  IFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVK 123
           +FGS   ERYGS++TL+E+     +++E  F  ++K+A+AALLNSY R   FPYSAWEVK
Sbjct: 68  VFGSGVFERYGSDVTLLEST--TRNDDENAFAGLLKQASAALLNSYAREG-FPYSAWEVK 127

Query: 124 TLFIKALVSKEAAVLQSQRFAFANESCN 152
           TL I+ALVSKEAA  Q+++F+ ANE+CN
Sbjct: 128 TLLIQALVSKEAAATQAKQFSVANEACN 149

[Close]

BLAST of CSPI07G15550 vs. TAIR10
Match: AT2G20515.1 (AT2G20515.1 unknown protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.6e-32
Identity = 74/146 (50.68%), Postives = 102/146 (69.86%), Query Frame = 1


Query: 7   LILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFG 66
           L+   LLCF A  +   SA RPGF+++R  GRCT Q+WSS+ EAWPRM PE +TV KIFG
Sbjct: 15  LVTFFLLCFFAGDS---SATRPGFIYTRHRGRCTPQYWSSQREAWPRMVPERSTVEKIFG 74

Query: 67  SR-AHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVKTL 126
              A ER+ S++TL+E+ A   DEE   +G ++K+  AAL+NSY R+  F Y+ WEVKT+
Sbjct: 75  VMVAKERWRSDLTLVESTA-RNDEEGNAYGALLKQGIAALINSYARKS-FSYAPWEVKTM 134

Query: 127 FIKALVSKEAAVLQSQRFAFANESCN 152
            I+A+VS+ AA  Q++ FA AN +C+
Sbjct: 135 LIQAMVSESAARRQAEHFAVANVACD 155

[Close]

BLAST of CSPI07G15550 vs. TAIR10
Match: AT2G16630.1 (AT2G16630.1 Pollen Ole e 1 allergen and extensin family protein)

HSP 1 Score: 47.4 bits (111), Expect = 9.3e-06
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 1


Query: 39  CTAQFWSSRSEA--WPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGR 98
           C+ Q W        W  + P++  VA  FG  A   YG++MT+ EA  G G    E +  
Sbjct: 243 CSHQLWMKPEYRCYWRAIGPDTK-VAVAFGLVAGRIYGTDMTVREALDGRG----EAYKT 302

Query: 99  VVKEATAALLNSYTRRRVFPYSAWEVKTLFIKALV--SKEAAVLQSQRFAFAN 148
           +++EAT ALLNSY     FPY++  V T    AL+  S+   ++ + RF  AN
Sbjct: 303 LLREATTALLNSYNSLG-FPYNSVAVITYTNLALLGNSEHDVLMTAIRFIKAN 349

[Close]

BLAST of CSPI07G15550 vs. NCBI nr
Match: gi|449462451|ref|XP_004148954.1| (PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 2.0e-74
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 1


Query: 1   MNSSRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
           M+SSRFL LLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT
Sbjct: 1   MDSSRFLNLLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60

Query: 61  VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120
           VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW
Sbjct: 61  VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120

Query: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 152
           EVKTLFIKALVSKEAAVLQSQRFAFANESCN
Sbjct: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESCN 151

[Close]

BLAST of CSPI07G15550 vs. NCBI nr
Match: gi|659100748|ref|XP_008451248.1| (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 3.9e-62
Identity = 136/150 (90.67%), Postives = 137/150 (91.33%), Query Frame = 1


Query: 1   MNSSRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 60
           M+SS FL LLLLL FAAA AEVASAR PGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT
Sbjct: 33  MDSSPFLTLLLLLSFAAA-AEVASARPPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESAT 92

Query: 61  VAKIFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAW 120
           VAKIFGSRA ERYGSEMTLMEAA GA   EEEVFGRVVKEATAALLNSY RRR FPYSAW
Sbjct: 93  VAKIFGSRARERYGSEMTLMEAAGGA---EEEVFGRVVKEATAALLNSYARRRDFPYSAW 152

Query: 121 EVKTLFIKALVSKEAAVLQSQRFAFANESC 151
           EVKTL IKALVSKEAAVLQSQRFAFANESC
Sbjct: 153 EVKTLLIKALVSKEAAVLQSQRFAFANESC 178

[Close]

BLAST of CSPI07G15550 vs. NCBI nr
Match: gi|645260112|ref|XP_008235679.1| (PREDICTED: uncharacterized protein LOC103334480 [Prunus mume])

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-40
Identity = 87/145 (60.00%), Postives = 116/145 (80.00%), Query Frame = 1


Query: 7   LILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFG 66
           L+LLLLL   +  +  A  +RPGFLF+RTTGRCT  +W SR EAWPRM P+++TV+K+FG
Sbjct: 15  LLLLLLLIVCSVPSTTAKTQRPGFLFTRTTGRCTPHYWGSRREAWPRMVPQTSTVSKVFG 74

Query: 67  SRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVKTLF 126
           SRA+ERY S++TL+EA     ++EE V+ R++K+A+AALLNSY R+  FPYSAWEVKTL 
Sbjct: 75  SRAYERYRSDLTLLEAT--VRNDEENVYPRLLKQASAALLNSYARKG-FPYSAWEVKTLV 134

Query: 127 IKALVSKEAAVLQSQRFAFANESCN 152
           I+ALVS +AA LQ+QRF+ ANE+C+
Sbjct: 135 IQALVSDKAAALQAQRFSVANEACH 156

[Close]

BLAST of CSPI07G15550 vs. NCBI nr
Match: gi|595790597|ref|XP_007199047.1| (hypothetical protein PRUPE_ppa018256mg [Prunus persica])

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-40
Identity = 87/145 (60.00%), Postives = 116/145 (80.00%), Query Frame = 1


Query: 7   LILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAKIFG 66
           L+LLLLL   +  +  A  +RPGFLF+RTTGRCT  +W SR EAWPRM P+++TV+K+FG
Sbjct: 10  LVLLLLLIACSVPSTTAKTQRPGFLFTRTTGRCTPHYWGSRREAWPRMVPQTSTVSKVFG 69

Query: 67  SRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVKTLF 126
           SRA+ERY S++TL+EA     ++EE V+ R++K+A+AALLNSY R+  FPYSAWEVKTL 
Sbjct: 70  SRAYERYRSDLTLLEAT--VRNDEENVYPRLLKQASAALLNSYARKG-FPYSAWEVKTLV 129

Query: 127 IKALVSKEAAVLQSQRFAFANESCN 152
           I+ALVS +AA LQ+QRF+ ANE+C+
Sbjct: 130 IQALVSDKAAALQAQRFSVANEACH 151

[Close]

BLAST of CSPI07G15550 vs. NCBI nr
Match: gi|657981676|ref|XP_008382864.1| (PREDICTED: uncharacterized protein LOC103445628 [Malus domestica])

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-40
Identity = 87/148 (58.78%), Postives = 118/148 (79.73%), Query Frame = 1


Query: 4   SRFLILLLLLCFAAATAEVASARRPGFLFSRTTGRCTAQFWSSRSEAWPRMAPESATVAK 63
           S+ ++LLLLL   +  A  A  +RPGFLF+RTTGRCT Q+W SR EAWP+M P+++TV+K
Sbjct: 9   SQLVLLLLLLVACSVPATTARNQRPGFLFTRTTGRCTPQYWGSRREAWPKMVPQTSTVSK 68

Query: 64  IFGSRAHERYGSEMTLMEAAAGAGDEEEEVFGRVVKEATAALLNSYTRRRVFPYSAWEVK 123
           +FGSRA+ERY S++TL+EA    G  EE V+ R++K+A+AALLNSY R+  +PY+AWEVK
Sbjct: 69  VFGSRAYERYRSDLTLLEATTMNG--EENVYPRLLKQASAALLNSYARKG-YPYTAWEVK 128

Query: 124 TLFIKALVSKEAAVLQSQRFAFANESCN 152
           TL I+ALVSK+AA LQ+Q F+ ANE+C+
Sbjct: 129 TLLIQALVSKKAAALQAQHFSIANEACH 153

The following BLAST results are available for this feature:

BLAST of CSPI07G15550 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI07G15550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K735_CUCSA	1.4e-74	98.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375760 PE=4 SV=1	[more]
M5VHK4_PRUPE	3.8e-40	60.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018256mg PE=4 SV=1	[more]
D7U301_VITVI	3.5e-38	56.08	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03390 PE=4 SV=...	[more]
B9SF38_RICCO	1.3e-37	57.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1213590 PE=4 SV=1	[more]
B9H8M4_POPTR	2.3e-37	56.76	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s24600g PE=4 SV=1	[more]

BLAST of CSPI07G15550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20515.1	2.6e-32	50.68	unknown protein	[more]
AT2G16630.1	9.3e-06	35.40	Pollen Ole e 1 allergen and extensin family protein	[more]

BLAST of CSPI07G15550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449462451\|ref\|XP_004148954.1\|	2.0e-74	98.68	PREDICTED: uncharacterized protein LOC101220310 [Cucumis sativus]	[more]
gi\|659100748\|ref\|XP_008451248.1\|	3.9e-62	90.67	PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo]	[more]
gi\|645260112\|ref\|XP_008235679.1\|	5.4e-40	60.00	PREDICTED: uncharacterized protein LOC103334480 [Prunus mume]	[more]
gi\|595790597\|ref\|XP_007199047.1\|	5.4e-40	60.00	hypothetical protein PRUPE_ppa018256mg [Prunus persica]	[more]
gi\|657981676\|ref\|XP_008382864.1\|	5.4e-40	58.78	PREDICTED: uncharacterized protein LOC103445628 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G15550.1	CSPI07G15550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33210	FAMILY NOT NAMED	coord: 1..150 score: 8.1
None	No IPR available	PANTHER	PTHR33210:SF5	SUBFAMILY NOT NAMED	coord: 1..150 score: 8.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G15550	Cla014836	Watermelon (97103) v1	cpiwmB586
CSPI07G15550	Csa7G375760	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G15550	MELO3C015729	Melon (DHL92) v3.5.1	cpimeB526
CSPI07G15550	ClCG09G007810	Watermelon (Charleston Gray)	cpiwcgB554
CSPI07G15550	Lsi02G022080	Bottle gourd (USVL1VR-Ls)	cpilsiB517
CSPI07G15550	MELO3C015729.2	Melon (DHL92) v3.6.1	cpimedB513
CSPI07G15550	CsaV3_7G027320	Cucumber (Chinese Long) v3	cpicucB414
CSPI07G15550	Cla97C09G170420	Watermelon (97103) v2	cpiwmbB597
CSPI07G15550	Bhi09G000971	Wax gourd	cpiwgoB717
CSPI07G15550	Cucsa.388470	Cucumber (Gy14) v1	cgycpiB574
CSPI07G15550	CmaCh17G013460	Cucurbita maxima (Rimu)	cmacpiB388
CSPI07G15550	CmoCh17G013090	Cucurbita moschata (Rifu)	cmocpiB377
CSPI07G15550	Cp4.1LG12g10300	Cucurbita pepo (Zucchini)	cpecpiB159
CSPI07G15550	CsGy7G014050	Cucumber (Gy14) v2	cgybcpiB331
CSPI07G15550	Carg11520	Silver-seed gourd	carcpiB0013

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G15550	Silver-seed gourd	carcpiB0099
CSPI07G15550	Cucurbita maxima (Rimu)	cmacpiB934
CSPI07G15550	Cucurbita moschata (Rifu)	cmocpiB913
CSPI07G15550	Cucurbita pepo (Zucchini)	cpecpiB345