CsaV3_7G010000 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATAATACAGTTTGTGATTTATTATCTAAAAATTAAAAAGAAAGTAAGAAAGATGTTTGAGTTCCAAGGCCAGCATTGAAGGCCTTAAACTTACCAATCCTCTTCTTCAGGAATGGAAAAACAAATTAGTTGAAAAACCTAAAAATGTTTAAGAAGATTTGCTAAATAAAGACGGTAGAAGGTTATGGCAGAAGACGTTAAAGAACAATTCACCCTCTTCTTTCATTTGTTTGCCTTATATTTCTCCTCCAATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTCTCGCGTCTGATTATCTACGTAAATCCACCAATGTACATTATGATGTATGTGCGTGTGTGCGCGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATTTCACACACTTCATCTTACTCATAATTTAACACCCTGCTTCTTCTTCTTCGTTTTCAATTTCTTCTCTATTCATTCATTCAATCAATTCAATTCATTTGTTGTAATTTGTTATCCATGTTCAAGTCTGAATCACGAATCTTATTTCGCC ATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAA ATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAA MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP
BLAST of CsaV3_7G010000 vs. NCBI nr
Match: XP_011657141.1 (PREDICTED: uncharacterized protein LOC105435808 [Cucumis sativus] >KGN47125.1 hypothetical protein Csa_6G188670 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 7.4e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. NCBI nr
Match: XP_023512816.1 (uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.4 bits (511), Expect = 2.0e-48 Identity = 100/140 (71.43%), Postives = 116/140 (82.86%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. NCBI nr
Match: XP_022148421.1 (uncharacterized protein LOC111017071 [Momordica charantia]) HSP 1 Score: 124.4 bits (311), Expect = 3.1e-25 Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. NCBI nr
Match: XP_015874007.1 (uncharacterized protein LOC107411018 [Ziziphus jujuba]) HSP 1 Score: 96.3 bits (238), Expect = 8.9e-17 Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. NCBI nr
Match: XP_018855192.1 (PREDICTED: uncharacterized protein LOC109017360 [Juglans regia]) HSP 1 Score: 91.7 bits (226), Expect = 2.2e-15 Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TAIR10
Match: AT1G07473.1 (unknown protein) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TAIR10
Match: AT1G07476.1 (unknown protein) HSP 1 Score: 40.8 bits (94), Expect = 8.1e-04 Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TrEMBL
Match: tr|A0A0A0KBQ7|A0A0A0KBQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.9e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TrEMBL
Match: tr|A0A2I4HGI9|A0A2I4HGI9_9ROSI (uncharacterized protein LOC109017360 OS=Juglans regia OX=51240 GN=LOC109017360 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 58/117 (49.57%), Postives = 73/117 (62.39%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TrEMBL
Match: tr|A0A2I4HTA9|A0A2I4HTA9_9ROSI (uncharacterized protein LOC108980070 OS=Juglans regia OX=51240 GN=LOC109021244 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.7e-14 Identity = 56/122 (45.90%), Postives = 72/122 (59.02%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TrEMBL
Match: tr|A0A2R6P663|A0A2R6P663_ACTCH (Major viral transcription factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31766 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.0e-13 Identity = 56/124 (45.16%), Postives = 70/124 (56.45%), Query Frame = 0
BLAST of CsaV3_7G010000 vs. TrEMBL
Match: tr|A0A068UKW1|A0A068UKW1_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00028298001 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.0e-13 Identity = 55/115 (47.83%), Postives = 65/115 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |