CsaV3_7G001230 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G001230
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionVWFA domain-containing protein
Locationchr7 : 1079236 .. 1080032 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGCGTTCGTGTAATTTAAATATCCCTTAAACCTTCATGACCAGGTACTTCCGCTCTCCATTTAAACATTACCGATTACGATTCCCATTCCCTCCAATTTCAATTGAAAACCCCTAACAAACATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGAAGGGTTGAAACTAATTTCGGTTTCTTTTTTTTCTTTTCTACTTTTATTTATTTAGTGTAAATTATTTTTCCCTTTCTCCTCTTAATTATTTTTTTTATCGATCCTTTTCTTTTGTGGAATTGGATTTGATTCCTTTTTTTAAAAAAAGAAAATTTTTACTATTTATTTCTTCGTGAAATAAATGTTTGAATGTATTGTGCGTATCTAATTTTGGGGAGAAAGGCACATCATGAAGAATCTTGTTTTAAAGCTTCCACTCTTTTTATTAATTTCAATTTCAAATTTTCACAAGGC

mRNA sequence

ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA

Coding sequence (CDS)

ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA

Protein sequence

MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVVKKTDLVQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIPEEIDSF
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: KGN43274.1 (hypothetical protein Csa_7G014600 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 4.5e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0

Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60
           MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 127
           EEIDSF
Sbjct: 121 EEIDSF 126

BLAST of CsaV3_7G001230 vs. NCBI nr
Match: XP_023511743.1 (uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39
Identity = 94/126 (74.60%), Postives = 102/126 (80.95%), Query Frame = 0

Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60
           MI+GKQ ASPNG FRRLFRAR RK+AKA+ LLEAIAK SREG GFVS +EE+GVVRIKMV
Sbjct: 1   MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60

Query: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDL QVLEAM     XX         +E RL ++RRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLAQVLEAM-XXXXXXXXXXXXXXXVEQRLAIMRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 127
           EEIDSF
Sbjct: 121 EEIDSF 125

BLAST of CsaV3_7G001230 vs. NCBI nr
Match: PQQ02570.1 (hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15
Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0

Query: 15  RRLFR-ARCRKSAK-----ANGLLEAIAKAS---REGAGFVSH-SEENGVVRIKMVVKKT 74
           R LFR  R R + K     +N L+EAIAK +   +EG   +SH ++E+GVVR+K++V++ 
Sbjct: 6   RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQ 65

Query: 75  DLVQVLEAMGGG-DGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQS 124
           DL QVLE M GG +    VV P+S+ +E RL++LR+K  LRA LAA     ++W PALQS
Sbjct: 66  DLKQVLELMNGGINSQASVVRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQSSWRPALQS 125

BLAST of CsaV3_7G001230 vs. NCBI nr
Match: PQQ14467.1 (hypothetical protein Pyn_20096 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 91.3 bits (225), Expect = 2.6e-15
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 0

Query: 15  RRLFR-ARCRKSAK-----ANGLLEAIAKAS---REGAGFVSH-SEENGVVRIKMVVKKT 74
           R LFR  R R + K     +N L+EAIAK +   +EG   +SH S+E+GVVR+K++V++ 
Sbjct: 6   RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQSQEDGVVRMKILVRRQ 65

Query: 75  DLVQVLEAMGGG-DGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAA-----ATWSPALQS 124
           DL QVLE   GG +    VV P+S+ +E RL++LR+K  LRA LAA     ++W PALQS
Sbjct: 66  DLKQVLELTNGGINSQASVVRPSSLCVEQRLSLLRKKHLLRASLAAKRSRQSSWRPALQS 125

BLAST of CsaV3_7G001230 vs. NCBI nr
Match: POE65836.1 (hypothetical protein CFP56_13922 [Quercus suber])

HSP 1 Score: 89.4 bits (220), Expect = 9.8e-15
Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 0

Query: 7   VASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVVKKTDL 66
           + +P   FR+ FRA+ +K++++N +LE +   +  G G VS  E++GV+R+K+VVKK DL
Sbjct: 8   MVTPKRVFRQ-FRAQNQKNSRSN-MLETVVNVN--GGGVVSCIEKDGVMRVKIVVKKQDL 67

Query: 67  VQVLEAMGGGDGXXGVVAPA---SVSMEHRLTVLRRKQFLRA----KLAAATWSPALQSI 124
            Q+LE MGGG      + P+   S+S E RL +L++K  LRA    + ++++WSPALQSI
Sbjct: 68  TQMLEVMGGGGKSKAHLQPSIMPSLSAEQRLNLLQKKHVLRANTTKESSSSSWSPALQSI 127

BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A0A0K2L8|A0A0A0K2L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.0e-60
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0

Query: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60
           MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120
           VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 EEIDSF 127
           EEIDSF
Sbjct: 121 EEIDSF 126

BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A2P4IBF1|A0A2P4IBF1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_13922 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.5e-15
Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 0

Query: 7   VASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVVKKTDL 66
           + +P   FR+ FRA+ +K++++N +LE +   +  G G VS  E++GV+R+K+VVKK DL
Sbjct: 8   MVTPKRVFRQ-FRAQNQKNSRSN-MLETVVNVN--GGGVVSCIEKDGVMRVKIVVKKQDL 67

Query: 67  VQVLEAMGGGDGXXGVVAPA---SVSMEHRLTVLRRKQFLRA----KLAAATWSPALQSI 124
            Q+LE MGGG      + P+   S+S E RL +L++K  LRA    + ++++WSPALQSI
Sbjct: 68  TQMLEVMGGGGKSKAHLQPSIMPSLSAEQRLNLLQKKHVLRANTTKESSSSSWSPALQSI 127

BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A061DZR6|A0A061DZR6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006557 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 0

Query: 2   IEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVV 61
           +EGK  ASP   F+++ R+R +K+ ++N LLEAIA+A+  G G VSH  E+GVVR+K+VV
Sbjct: 1   MEGK--ASPKREFKQV-RSRNQKALRSN-LLEAIAEAN--GGGVVSHINEDGVVRMKIVV 60

Query: 62  KKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRA---KLAAATWSPALQS 121
           +K DL Q+L  + GG       +P S S+E RL +LRRK  +R+   K +   WSP LQS
Sbjct: 61  RKQDLKQMLGMINGGGRISSNQSP-SPSVEERLNLLRRKHLMRSNAVKKSPRPWSPELQS 117

Query: 122 IPEE 123
           IPEE
Sbjct: 121 IPEE 117

BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A200QEM6|A0A200QEM6_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8809g23 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-14
Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 0

Query: 3   EGKQVASPNGTFRRL-FRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVV 62
           E K ++SP    RRL   AR +K+     LLEAIA+A   G G VS  +E+GVVR+K+VV
Sbjct: 9   ENKGMSSPKRDCRRLSIAARNQKATTRCNLLEAIAQA--HGGGVVSRMDEDGVVRMKIVV 68

Query: 63  KKTDLVQVLEAMGGGDGXXGV-----VAPASVSMEHRLTVLRRKQFLRA---KLAAATWS 122
           KK DL  +L+ M  G+    +     +  +++S+E RL V+RR+Q  RA   K    TW 
Sbjct: 69  KKQDLKHMLQMMENGNKNNSIHQKSPLVSSNLSLEQRLHVMRRRQLRRAENVKGGPRTWR 128

Query: 123 PALQSIPEEI 124
           PALQSIPE++
Sbjct: 129 PALQSIPEDL 136

BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|B9H1L6|B9H1L6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G178500v3 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.5e-14
Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0

Query: 3   EGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVVK 62
           EGK  ASP   FR L R R  +S K+N L E+I + +  G   VSH+ ENG VR+K+VV+
Sbjct: 9   EGK--ASPKRDFRALLRGRNHRSLKSN-LPESIGQVN--GGCVVSHTNENGFVRMKLVVR 68

Query: 63  KTDLVQVLEAMGGGDGXXGVVA---PASVSMEHRLTVLRRKQFLRAKLAAA----TWSPA 122
           K DL Q+LE M GG       +    +S+S+E RL +LRRK   R+  A      +W+PA
Sbjct: 69  KQDLKQMLEVMRGGKSNANQASYSPVSSLSLEQRLNLLRRKHLSRSNSAKGSCRRSWTPA 128

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43274.14.5e-60100.00hypothetical protein Csa_7G014600 [Cucumis sativus][more]
XP_023511743.15.7e-3974.60uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo][more]
PQQ02570.11.2e-1548.80hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora][more]
PQQ14467.12.6e-1548.80hypothetical protein Pyn_20096 [Prunus yedoensis var. nudiflora][more]
POE65836.19.8e-1543.55hypothetical protein CFP56_13922 [Quercus suber][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K2L8|A0A0A0K2L8_CUCSA3.0e-60100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1[more]
tr|A0A2P4IBF1|A0A2P4IBF1_QUESU6.5e-1543.55Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_13922 PE=4 SV=1[more]
tr|A0A061DZR6|A0A061DZR6_THECC1.1e-1448.39Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006557 PE=4 SV=1[more]
tr|A0A200QEM6|A0A200QEM6_9MAGN5.5e-1443.85Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8809g23 PE=4 SV=1[more]
tr|B9H1L6|B9H1L6_POPTR5.5e-1446.03Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G178500v3 PE=... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G001230.1CsaV3_7G001230.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33148FAMILY NOT NAMEDcoord: 8..123
NoneNo IPR availablePANTHERPTHR33148:SF4SUBFAMILY NOT NAMEDcoord: 8..123

The following gene(s) are paralogous to this gene:

None