CsaV3_7G001230 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGCGTTCGTGTAATTTAAATATCCCTTAAACCTTCATGACCAGGTACTTCCGCTCTCCATTTAAACATTACCGATTACGATTCCCATTCCCTCCAATTTCAATTGAAAACCCCTAACAAACATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGAAGGGTTGAAACTAATTTCGGTTTCTTTTTTTTCTTTTCTACTTTTATTTATTTAGTGTAAATTATTTTTCCCTTTCTCCTCTTAATTATTTTTTTTATCGATCCTTTTCTTTTGTGGAATTGGATTTGATTCCTTTTTTTAAAAAAAGAAAATTTTTACTATTTATTTCTTCGTGAAATAAATGTTTGAATGTATTGTGCGTATCTAATTTTGGGGAGAAAGGCACATCATGAAGAATCTTGTTTTAAAGCTTCCACTCTTTTTATTAATTTCAATTTCAAATTTTCACAAGGC ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA ATGATCGAAGGAAAGCAGGTCGCGTCCCCGAACGGAACTTTCCGTCGACTTTTCAGAGCTCGATGCCGGAAAAGTGCCAAAGCCAATGGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAGCTGGTTTTGTTTCTCATAGCGAAGAAAATGGAGTTGTACGGATAAAAATGGTGGTAAAGAAGACAGATTTAGTTCAAGTTCTCGAAGCTATGGGCGGCGGTGATGGAGGCGGAGGAGTTGTTGCTCCGGCGTCGGTTTCCATGGAACATCGGTTGACGGTTTTGAGGCGGAAGCAATTTCTACGTGCAAAACTGGCGGCCGCGACTTGGAGTCCGGCGCTGCAGAGCATTCCGGAAGAGATCGATTCATTCTGA MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMVVKKTDLVQVLEAMGGGDGGGGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIPEEIDSF
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: KGN43274.1 (hypothetical protein Csa_7G014600 [Cucumis sativus]) HSP 1 Score: 240.0 bits (611), Expect = 4.5e-60 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: XP_023511743.1 (uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.9 bits (429), Expect = 5.7e-39 Identity = 94/126 (74.60%), Postives = 102/126 (80.95%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: PQQ02570.1 (hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 92.4 bits (228), Expect = 1.2e-15 Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: PQQ14467.1 (hypothetical protein Pyn_20096 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 91.3 bits (225), Expect = 2.6e-15 Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. NCBI nr
Match: POE65836.1 (hypothetical protein CFP56_13922 [Quercus suber]) HSP 1 Score: 89.4 bits (220), Expect = 9.8e-15 Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A0A0K2L8|A0A0A0K2L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.0e-60 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A2P4IBF1|A0A2P4IBF1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_13922 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.5e-15 Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A061DZR6|A0A061DZR6_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_006557 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14 Identity = 60/124 (48.39%), Postives = 83/124 (66.94%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|A0A200QEM6|A0A200QEM6_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8809g23 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.5e-14 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 0
BLAST of CsaV3_7G001230 vs. TrEMBL
Match: tr|B9H1L6|B9H1L6_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G178500v3 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 5.5e-14 Identity = 58/126 (46.03%), Postives = 76/126 (60.32%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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