Cla97C02G030710 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C02G030710
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Unknown protein
Location	Cla97Chr02 : 3691121 .. 3691498 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGACGGAAAGCAGACTGTGTCGCCGAACGGAGCTTTCCGGCGACTTTTCAGAGCTCGATGCCGGAAAAATGCCAAACCCAATAGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCAGAGCGAAGAAAACGGCGTCGTACGGATAAAGATGGTGGTGAAGAAGACAGATTTAGCCCAAGTTCTCGAAGCCATGGGCAGCGACGGCGGCCGCGGCGAAGGAGCTGCTCCGGCGTCTGTCTCCGTCGAACAGCGGTTGGCTCTTATGAGGCGGAAGCAACTTCTCCGTGCGAAATTAGCGGCCGCCACTTGGAGTCCGGCGCTGCAGAGCATTCCTGAGATCGATTCATTCTGA

mRNA sequence

ATGGTCGACGGAAAGCAGACTGTGTCGCCGAACGGAGCTTTCCGGCGACTTTTCAGAGCTCGATGCCGGAAAAATGCCAAACCCAATAGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCAGAGCGAAGAAAACGGCGTCGTACGGATAAAGATGGTGGTGAAGAAGACAGATTTAGCCCAAGTTCTCGAAGCCATGGGCAGCGACGGCGGCCGCGGCGAAGGAGCTGCTCCGGCGTCTGTCTCCGTCGAACAGCGGTTGGCTCTTATGAGGCGGAAGCAACTTCTCCGTGCGAAATTAGCGGCCGCCACTTGGAGTCCGGCGCTGCAGAGCATTCCTGAGATCGATTCATTCTGA

Coding sequence (CDS)

ATGGTCGACGGAAAGCAGACTGTGTCGCCGAACGGAGCTTTCCGGCGACTTTTCAGAGCTCGATGCCGGAAAAATGCCAAACCCAATAGTCTATTGGAAGCCATTGCCAAAGCAAGCAGAGAAGGAACTGGTTTTGTTTCTCAGAGCGAAGAAAACGGCGTCGTACGGATAAAGATGGTGGTGAAGAAGACAGATTTAGCCCAAGTTCTCGAAGCCATGGGCAGCGACGGCGGCCGCGGCGAAGGAGCTGCTCCGGCGTCTGTCTCCGTCGAACAGCGGTTGGCTCTTATGAGGCGGAAGCAACTTCTCCGTGCGAAATTAGCGGCCGCCACTTGGAGTCCGGCGCTGCAGAGCATTCCTGAGATCGATTCATTCTGA

Protein sequence

MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAAATWSPALQSIPEIDSF

Homology

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BLAST of Cla97C02G030710 vs. NCBI nr
Match: KGN43274.1 (hypothetical protein Csa_7G014600 [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 4.5e-44
Identity = 100/126 (79.37%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 1   MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMV 60
           M++GKQ  SPNG FRRLFRARCRK+AK N LLEAIAKASREG GFVS SEENGVVRIKMV
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAAATWSPALQSIP 120
           VKKTDL QVLEAMG   G     APASVS+E RL ++RRKQ LRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 -EIDSF 126
            EIDSF
Sbjct: 121 EEIDSF 126

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BLAST of Cla97C02G030710 vs. NCBI nr
Match: XP_023511743.1 (uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 172.6 bits (436), Expect = 8.7e-40
Identity = 98/126 (77.78%), Postives = 104/126 (82.54%), Query Frame = 0


Query: 1   MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMV 60
           M+DGKQT SPNGAFRRLFRAR RKNAK ++LLEAIAK SREGTGFVSQ+EE+GVVRIKMV
Sbjct: 1   MIDGKQTASPNGAFRRLFRARGRKNAKASNLLEAIAKVSREGTGFVSQNEEDGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAAATWSPALQSIP 120
           VKKTDLAQVLEAM                VEQRLA+MRRKQ LRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLAQVLEAM-XXXXXXXXXXXXXXXVEQRLAIMRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 -EIDSF 126
            EIDSF
Sbjct: 121 EEIDSF 125

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BLAST of Cla97C02G030710 vs. NCBI nr
Match: PQQ02570.1 (hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 86.7 bits (213), Expect = 6.3e-14
Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 15  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKT 74
           R LFR  R R N K      N+L+EAIAK +   +EGT  +S Q++E+GVVR+K++V++ 
Sbjct: 6   RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQTQEDGVVRMKILVRRQ 65

Query: 75  DLAQVLEAM-GSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAA-----ATWSPALQS 122
           DL QVLE M G    +     P+S+ VEQRL+L+R+K LLRA LAA     ++W PALQS
Sbjct: 66  DLKQVLELMNGGINSQASVVRPSSLCVEQRLSLLRKKHLLRASLAAKHSRQSSWRPALQS 125

[Close]

BLAST of Cla97C02G030710 vs. NCBI nr
Match: PQQ14467.1 (hypothetical protein Pyn_20096 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 85.5 bits (210), Expect = 1.4e-13
Identity = 61/123 (49.59%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 15  RRLFR-ARCRKNAK-----PNSLLEAIAKAS---REGTGFVS-QSEENGVVRIKMVVKKT 74
           R LFR  R R N K      N+L+EAIAK +   +EGT  +S QS+E+GVVR+K++V++ 
Sbjct: 6   RVLFRHGRARMNQKSNLITSNALMEAIAKVNGDHQEGTNVLSHQSQEDGVVRMKILVRRQ 65

Query: 75  DLAQVLE-AMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAA-----ATWSPALQS 122
           DL QVLE   G    +     P+S+ VEQRL+L+R+K LLRA LAA     ++W PALQS
Sbjct: 66  DLKQVLELTNGGINSQASVVRPSSLCVEQRLSLLRKKHLLRASLAAKRSRQSSWRPALQS 125

[Close]

BLAST of Cla97C02G030710 vs. NCBI nr
Match: POE65836.1 (hypothetical protein CFP56_13922 [Quercus suber])

HSP 1 Score: 84.3 bits (207), Expect = 3.1e-13
Identity = 55/121 (45.45%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 8   VSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLA 67
           V+P   FR+ FRA+ +KN++ N +LE +   +  G G VS  E++GV+R+K+VVKK DL 
Sbjct: 9   VTPKRVFRQ-FRAQNQKNSRSN-MLETVVNVN--GGGVVSCIEKDGVMRVKIVVKKQDLT 68

Query: 68  QVLEAMGSDGGRGEGAAPA---SVSVEQRLALMRRKQLLRA----KLAAATWSPALQSIP 122
           Q+LE MG  G       P+   S+S EQRL L+++K +LRA    + ++++WSPALQSIP
Sbjct: 69  QMLEVMGGGGKSKAHLQPSIMPSLSAEQRLNLLQKKHVLRANTTKESSSSSWSPALQSIP 125

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BLAST of Cla97C02G030710 vs. TrEMBL
Match: tr|A0A0A0K2L8|A0A0A0K2L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-44
Identity = 100/126 (79.37%), Postives = 106/126 (84.13%), Query Frame = 0


Query: 1   MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMV 60
           M++GKQ  SPNG FRRLFRARCRK+AK N LLEAIAKASREG GFVS SEENGVVRIKMV
Sbjct: 1   MIEGKQVASPNGTFRRLFRARCRKSAKANGLLEAIAKASREGAGFVSHSEENGVVRIKMV 60

Query: 61  VKKTDLAQVLEAMGSDGGRGEGAAPASVSVEQRLALMRRKQLLRAKLAAATWSPALQSIP 120
           VKKTDL QVLEAMG   G     APASVS+E RL ++RRKQ LRAKLAAATWSPALQSIP
Sbjct: 61  VKKTDLVQVLEAMGGGDGXXGVVAPASVSMEHRLTVLRRKQFLRAKLAAATWSPALQSIP 120

Query: 121 -EIDSF 126
            EIDSF
Sbjct: 121 EEIDSF 126

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BLAST of Cla97C02G030710 vs. TrEMBL
Match: tr|A0A2P5EWK1|A0A2P5EWK1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_142120 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 58/118 (49.15%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 16  RLFRARCRK---NAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLAQVLEA 75
           RL RAR  +   N + N LL+AIAK++    G VSQ+EE+GVVR+K+VV+K DL Q+LE 
Sbjct: 23  RLHRARNHQKNINTRSNLLLDAIAKSN----GVVSQTEEDGVVRMKIVVRKQDLKQMLEV 82

Query: 76  MG----SDGGRGEGAAPASVSVEQRLALMRRKQ-LLRAKLA----AATWSPALQSIPE 122
           MG     +G     +   S S EQRL+L+R+K  L+RA LA     ++WSP LQSIPE
Sbjct: 83  MGGNKQGNGSNNPSSFSPSFSAEQRLSLLRKKHVLMRANLAKQSRRSSWSPVLQSIPE 136

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BLAST of Cla97C02G030710 vs. TrEMBL
Match: tr|A0A2P4IBF1|A0A2P4IBF1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_13922 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 55/121 (45.45%), Postives = 81/121 (66.94%), Query Frame = 0


Query: 8   VSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLA 67
           V+P   FR+ FRA+ +KN++ N +LE +   +  G G VS  E++GV+R+K+VVKK DL 
Sbjct: 9   VTPKRVFRQ-FRAQNQKNSRSN-MLETVVNVN--GGGVVSCIEKDGVMRVKIVVKKQDLT 68

Query: 68  QVLEAMGSDGGRGEGAAPA---SVSVEQRLALMRRKQLLRA----KLAAATWSPALQSIP 122
           Q+LE MG  G       P+   S+S EQRL L+++K +LRA    + ++++WSPALQSIP
Sbjct: 69  QMLEVMGGGGKSKAHLQPSIMPSLSAEQRLNLLQKKHVLRANTTKESSSSSWSPALQSIP 125

[Close]

BLAST of Cla97C02G030710 vs. TrEMBL
Match: tr|A0A2C9W2T4|A0A2C9W2T4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G070500 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 6.0e-13
Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 0


Query: 1   MVDGKQTVSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMV 60
           + +GK + SP    R L RAR  ++ + N+LLE+IA+A+  G   VSQ  E+GVVR+K++
Sbjct: 5   VAEGKAS-SPKREIRSL-RARNHRSLR-NNLLESIAQAN--GGSVVSQVNEDGVVRMKLL 64

Query: 61  VKKTDLAQVLEAMGSDGGR-GEGAAPASVSVEQRLALMRRKQLLRAKLAA-----ATWSP 120
           V+K DL Q+LE M   G    +  + +S+SVEQRL L+R+KQLLRA  AA      +W+P
Sbjct: 65  VRKQDLRQMLEVMRGHGKNISQQQSFSSLSVEQRLNLLRKKQLLRANAAAKESRRRSWTP 124

Query: 121 ALQSIPE 122
            LQSIPE
Sbjct: 125 QLQSIPE 126

[Close]

BLAST of Cla97C02G030710 vs. TrEMBL
Match: tr|A0A2N9HB17|A0A2N9HB17_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39448 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-12
Identity = 56/121 (46.28%), Postives = 76/121 (62.81%), Query Frame = 0


Query: 8   VSPNGAFRRLFRARCRKNAKPNSLLEAIAKASREGTGFVSQSEENGVVRIKMVVKKTDLA 67
           V P   F+ + RAR  KN++ N +LE +   +  G G VS  EE+GVVR+K++VKK DL 
Sbjct: 9   VIPKQVFQHV-RARNHKNSRTN-ILENVVNVN--GGGVVSCYEEDGVVRMKIIVKKQDLT 68

Query: 68  QVLEAMGSDGGRGEGAAPA---SVSVEQRLALMRRKQLLRAKLA----AATWSPALQSIP 122
           Q+LE MG  G       P+   S+S EQRL L+++K LLRA       +++WSPALQSIP
Sbjct: 69  QMLEVMGGGGKNKAHHQPSITPSLSAEQRLNLLQKKHLLRANTTKESWSSSWSPALQSIP 125

The following BLAST results are available for this feature:

BLAST of Cla97C02G030710 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43274.1	4.5e-44	79.37	hypothetical protein Csa_7G014600 [Cucumis sativus]	[more]
XP_023511743.1	8.7e-40	77.78	uncharacterized protein LOC111776510 [Cucurbita pepo subsp. pepo]	[more]
PQQ02570.1	6.3e-14	49.59	hypothetical protein Pyn_10648 [Prunus yedoensis var. nudiflora]	[more]
PQQ14467.1	1.4e-13	49.59	hypothetical protein Pyn_20096 [Prunus yedoensis var. nudiflora]	[more]
POE65836.1	3.1e-13	45.45	hypothetical protein CFP56_13922 [Quercus suber]	[more]

BLAST of Cla97C02G030710 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2L8\|A0A0A0K2L8_CUCSA	2.9e-44	79.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014600 PE=4 SV=1	[more]
tr\|A0A2P5EWK1\|A0A2P5EWK1_9ROSA	2.1e-13	49.15	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_142120 PE=4 S...	[more]
tr\|A0A2P4IBF1\|A0A2P4IBF1_QUESU	2.1e-13	45.45	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_13922 PE=4 SV=1	[more]
tr\|A0A2C9W2T4\|A0A2C9W2T4_MANES	6.0e-13	47.24	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G070500 PE=4 SV=...	[more]
tr\|A0A2N9HB17\|A0A2N9HB17_FAGSY	1.0e-12	46.28	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39448 PE=4 SV=1	[more]

BLAST of Cla97C02G030710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C02G030710 vs. TAIR10


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C02G030710.1	Cla97C02G030710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 13..121
None	No IPR available	PANTHER	PTHR33148:SF4	SUBFAMILY NOT NAMED	coord: 13..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C02G030710	Cla015806	Watermelon (97103) v1	wmwmbB317
Cla97C02G030710	Csa7G014600	Cucumber (Chinese Long) v2	cuwmbB529
Cla97C02G030710	MELO3C013332	Melon (DHL92) v3.5.1	mewmbB179
Cla97C02G030710	ClCG02G003900	Watermelon (Charleston Gray)	wcgwmbB138
Cla97C02G030710	CSPI07G01180	Wild cucumber (PI 183967)	cpiwmbB553
Cla97C02G030710	CmaCh19G007540	Cucurbita maxima (Rimu)	cmawmbB531
Cla97C02G030710	CmoCh19G007670	Cucurbita moschata (Rifu)	cmowmbB512
Cla97C02G030710	CsGy7G001000	Cucumber (Gy14) v2	cgybwmbB502
Cla97C02G030710	MELO3C013332.2	Melon (DHL92) v3.6.1	medwmbB165
Cla97C02G030710	CsaV3_7G001230	Cucumber (Chinese Long) v3	cucwmbB549
Cla97C02G030710	Bhi05G001450	Wax gourd	wgowmbB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C02G030710	Watermelon (97103) v2	wmbwmbB109
Cla97C02G030710	Silver-seed gourd	carwmbB0144
Cla97C02G030710	Silver-seed gourd	carwmbB0360
Cla97C02G030710	Silver-seed gourd	carwmbB0847
Cla97C02G030710	Silver-seed gourd	carwmbB1123
Cla97C02G030710	Cucumber (Gy14) v1	cgywmbB638
Cla97C02G030710	Cucurbita maxima (Rimu)	cmawmbB101
Cla97C02G030710	Cucurbita maxima (Rimu)	cmawmbB570
Cla97C02G030710	Cucurbita maxima (Rimu)	cmawmbB634
Cla97C02G030710	Cucurbita maxima (Rimu)	cmawmbB813
Cla97C02G030710	Cucurbita moschata (Rifu)	cmowmbB094
Cla97C02G030710	Cucurbita moschata (Rifu)	cmowmbB553
Cla97C02G030710	Cucurbita moschata (Rifu)	cmowmbB608
Cla97C02G030710	Cucurbita moschata (Rifu)	cmowmbB787
Cla97C02G030710	Bottle gourd (USVL1VR-Ls)	lsiwmbB086
Cla97C02G030710	Watermelon (Charleston Gray)	wcgwmbB324
Cla97C02G030710	Watermelon (97103) v1	wmwmbB087