CsaV3_6G035680 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G035680
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionpentatricopeptide repeat-containing protein At1g19720-like
Locationchr6 : 19666904 .. 19668937 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCCGGTATATGGTTTTGCTTCCTCAAATAATGCTTCTCTTCGCCTTCCATCATTCCCCAAGTTTCACTTCGACCTCTATCCCAATTCTAGCTTTTCTCGAAATTCCATGAATGTAGCTTGTAGAATGCATTTCCATGCGGTATCGGCCCATAATAGACCCAATTGTCAATTTTCTCCAATTGCTATACGTACGGATCGTAATTGCGAAGGTGTTAATGTCCCAATCCCTCGTAGTTTTGCTTTGTTTGATCATAGTGCCCAGGTTGTTAAATTAAATGATTGTCGAGTTGATAATTTGTTTGGAAAGAAGTTGACTAAGTTTTATGTCAAGGATGTTAAGTGCGTGGACAGTGACAGTAAGGTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGAGCGTATTGTCGATCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGTATACTACCCGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACTGGTAAAATGGCTCATGGGTATGCCATTAGGAAGAGGATGGTCTCTGATATTGTTATTGAGAATGCTCTTATGGATTTCTATGGCAATTGTGGGGATTTGAGTTCTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGATGTGGTTTCGTGGACCGCGCTTGTCTCTGCCTACATTGAAGAAGGTCTTTTGAATGAGGCGATGGAAGTATTTCACTCCATGCAGTCTAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTAATACTGCGCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGACCAAGGGTTAATTCATGGAACGGAGTCATATCAGGCTGTGTTCAAAATGGATATTTCAAAGATGCTTTGGATGTATTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATATTACCAGCTTGTGCAGGGTTGAGAGATCTAGGTTTAGGCAGGGCTGTTCATGCATATGCTCTTAAGTGCGAGCTGTGTACAAACATTTACGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATCGTGCTGAAGAAATTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTTACATGAACCAGGGAAAGAATAGCTGGGCGTTAGAACATTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGATATGCAAAAAATGGGCAGAAAGTTGAAGCATATGAGTTGCTATCTGATATGTTACAAGAAAATTTGGTGCCAAATGTTATATCTTTAAATGTTTTAGTGTCTGGATTTCAACAATCTGGGTTAAATTATGAAGCTCTAGAATTATGCCAGACCATGCTATGCACGGGCTCCCTTCTTAACAAGACGATTGCTTTTCCGGTCATACCAAATACCGTCACTCTAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAATTTGTTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATTATTTTGTAAACAACTACTTCATTTCAAGTGCTCTAATTAACATGTACGCAAAGTGTGGGGATATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACCGGAATGTAGTTTGTTGGAATGCTTTGATTGCAGGTCTTTTGAGAACAATGCAGCACAAAATGGCAGTTGAACTATTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCAGCCACTTTTTCAATACTTCTCCCTGCCTTATCTGAAAGGGCAGATTTGAAAGTGAGAAGACAGCTGCATTCCTATATCATCAAAAGTCAGCACCTTGAATCACGCAACGACCTTGCAAATGTCTTAAGTTCAGACAATGTTGATGTTGGAGTTTTGCTCCATGGAATATAA

mRNA sequence

ATGGCAACTCCGGTATATGGTTTTGCTTCCTCAAATAATGCTTCTCTTCGCCTTCCATCATTCCCCAAGTTTCACTTCGACCTCTATCCCAATTCTAGCTTTTCTCGAAATTCCATGAATGTAGCTTGTAGAATGCATTTCCATGCGGTATCGGCCCATAATAGACCCAATTGTCAATTTTCTCCAATTGCTATACGTACGGATCGTAATTGCGAAGGTGTTAATGTCCCAATCCCTCGTAGTTTTGCTTTGTTTGATCATAGTGCCCAGGTTGTTAAATTAAATGATTGTCGAGTTGATAATTTGTTTGGAAAGAAGTTGACTAAGTTTTATGTCAAGGATGTTAAGTGCGTGGACAGTGACAGTAAGGTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGAGCGTATTGTCGATCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGTATACTACCCGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACTGGTAAAATGGCTCATGGGTATGCCATTAGGAAGAGGATGGTCTCTGATATTGTTATTGAGAATGCTCTTATGGATTTCTATGGCAATTGTGGGGATTTGAGTTCTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGATGTGGTTTCGTGGACCGCGCTTGTCTCTGCCTACATTGAAGAAGGTCTTTTGAATGAGGCGATGGAAGTATTTCACTCCATGCAGTCTAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTAATACTGCGCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGACCAAGGGTTAATTCATGGAACGGAGTCATATCAGGCTGTGTTCAAAATGGATATTTCAAAGATGCTTTGGATGTATTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATATTACCAGCTTGTGCAGGGTTGAGAGATCTAGGTTTAGGCAGGGCTGTTCATGCATATGCTCTTAAGTGCGAGCTGTGTACAAACATTTACGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATCGTGCTGAAGAAATTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTTACATGAACCAGGGAAAGAATAGCTGGGCGTTAGAACATTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGATATGCAAAAAATGGGCAGAAAGTTGAAGCATATGAGTTGCTATCTGATATGTTACAAGAAAATTTGGTGCCAAATGTTATATCTTTAAATGTTTTAGTGTCTGGATTTCAACAATCTGGGTTAAATTATGAAGCTCTAGAATTATGCCAGACCATGCTATGCACGGGCTCCCTTCTTAACAAGACGATTGCTTTTCCGGTCATACCAAATACCGTCACTCTAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAATTTGTTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATTATTTTGTAAACAACTACTTCATTTCAAGTGCTCTAATTAACATGTACGCAAAGTGTGGGGATATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACCGGAATGTAGTTTGTTGGAATGCTTTGATTGCAGGTCTTTTGAGAACAATGCAGCACAAAATGGCAGTTGAACTATTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCAGCCACTTTTTCAATACTTCTCCCTGCCTTATCTGAAAGGGCAGATTTGAAAGTGAGAAGACAGCTGCATTCCTATATCATCAAAAGTCAGCACCTTGAATCACGCAACGACCTTGCAAATGTCTTAAGTTCAGACAATGTTGATGTTGGAGTTTTGCTCCATGGAATATAA

Coding sequence (CDS)

ATGGCAACTCCGGTATATGGTTTTGCTTCCTCAAATAATGCTTCTCTTCGCCTTCCATCATTCCCCAAGTTTCACTTCGACCTCTATCCCAATTCTAGCTTTTCTCGAAATTCCATGAATGTAGCTTGTAGAATGCATTTCCATGCGGTATCGGCCCATAATAGACCCAATTGTCAATTTTCTCCAATTGCTATACGTACGGATCGTAATTGCGAAGGTGTTAATGTCCCAATCCCTCGTAGTTTTGCTTTGTTTGATCATAGTGCCCAGGTTGTTAAATTAAATGATTGTCGAGTTGATAATTTGTTTGGAAAGAAGTTGACTAAGTTTTATGTCAAGGATGTTAAGTGCGTGGACAGTGACAGTAAGGTGTTCGATGAAATTCCTGAGAGAACGCTGCCAGCCTATGCAGCTTTGATTAGAGCGTATTGTCGATCAGAGAAGTGGAATGAGCTCTTTGCGGCATTCAGATCGATGGTTGATGAGGGTATACTACCCGATAAATACTTAGTGCCCACGATTCTTAAAGCATGTTCCAGAAGACAAATGGTGAAGACTGGTAAAATGGCTCATGGGTATGCCATTAGGAAGAGGATGGTCTCTGATATTGTTATTGAGAATGCTCTTATGGATTTCTATGGCAATTGTGGGGATTTGAGTTCTTCGATCAATGTTTTTGATTCGATGAGTGAAAAAGATGTGGTTTCGTGGACCGCGCTTGTCTCTGCCTACATTGAAGAAGGTCTTTTGAATGAGGCGATGGAAGTATTTCACTCCATGCAGTCTAGTGGGTTGAAGCCTGATTTGATATCTTGGAATGCACTGGTCTCAGGGTTTGCTCGATATGGAGAGACTAATACTGCGCTCACATACTTGGAAGCCATGCAAGAAGAAGGATTGAGACCAAGGGTTAATTCATGGAACGGAGTCATATCAGGCTGTGTTCAAAATGGATATTTCAAAGATGCTTTGGATGTATTTATTAATATGCTGTTGTTTCCTGAGAATCCAAATTCTGTTACTGTTGCGAGTATATTACCAGCTTGTGCAGGGTTGAGAGATCTAGGTTTAGGCAGGGCTGTTCATGCATATGCTCTTAAGTGCGAGCTGTGTACAAACATTTACGTCGAAGGATCATTAGTTGATATGTATTCAAAATGCGGACAAGATGATCGTGCTGAAGAAATTTTTGCCAAAGCAGAGAAGAAAAACATTACATTGTGGAATGAAATTATTGCAACTTACATGAACCAGGGAAAGAATAGCTGGGCGTTAGAACATTTTAGATCAATGCAGCATCATGGACTAAAACCTGATGTTGTAACCTACAACACACTGCTAGCTGGATATGCAAAAAATGGGCAGAAAGTTGAAGCATATGAGTTGCTATCTGATATGTTACAAGAAAATTTGGTGCCAAATGTTATATCTTTAAATGTTTTAGTGTCTGGATTTCAACAATCTGGGTTAAATTATGAAGCTCTAGAATTATGCCAGACCATGCTATGCACGGGCTCCCTTCTTAACAAGACGATTGCTTTTCCGGTCATACCAAATACCGTCACTCTAACTGCTGCTCTGGCAGCTTGTGCTAGCTTGAATTTGTTGCACAAAGGGAAGGAAATCCATGGATATATGTTGAGGAATTATTTTGTAAACAACTACTTCATTTCAAGTGCTCTAATTAACATGTACGCAAAGTGTGGGGATATTGATTCGGCAATTCAAGTATTTAGCAGAATAAAGAACCGGAATGTAGTTTGTTGGAATGCTTTGATTGCAGGTCTTTTGAGAACAATGCAGCACAAAATGGCAGTTGAACTATTCTGTCAAATGCTAGTAGAAGGCATAAAACCAAGTTCAGCCACTTTTTCAATACTTCTCCCTGCCTTATCTGAAAGGGCAGATTTGAAAGTGAGAAGACAGCTGCATTCCTATATCATCAAAAGTCAGCACCTTGAATCACGCAACGACCTTGCAAATGTCTTAAGTTCAGACAATGTTGATGTTGGAGTTTTGCTCCATGGAATATAA

Protein sequence

MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQFSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVSGFARYGETNTALTYLEAMQEEGLRPRVNSWNGVISGCVQNGYFKDALDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLKPDVVTYNTLLAGYAKNGQKVEAYELLSDMLQENLVPNVISLNVLVSGFQQSGLNYEALELCQTMLCTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLANVLSSDNVDVGVLLHGI
Homology
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BLAST of CsaV3_6G035680 vs. NCBI nr
Match: XP_004146805.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis sativus] >KGN47749.1 hypothetical protein Csa_6G399730 [Cucumis sativus])

HSP 1 Score: 1019.6 bits (2635), Expect = 4.8e-294
Identity = 677/677 (100.00%), Postives = 677/677 (100.00%), Query Frame = 0 

Query: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60
           MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120
           SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360
           XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420
           VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540
           XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600
           EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM
Sbjct: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660
           QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNVDVGVLLHGI 678
           NVLSSDNVDVGVLLHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

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BLAST of CsaV3_6G035680 vs. NCBI nr
Match: XP_008445371.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis melo])

HSP 1 Score: 936.0 bits (2418), Expect = 7.0e-269
Identity = 621/677 (91.73%), Postives = 636/677 (93.94%), Query Frame = 0 

Query: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60
           MATP+ GF SSNNAS RLPSFPKFHFDLYPNSSFSRNSMNVACRMHF+AV A NRPNCQF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120
           SPIAIRTD  CEGVNVPIP SF LFDH++QVVKLN CRVDNLFGKKLTKFYVKDVKCVD 
Sbjct: 61  SPIAIRTD--CEGVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           DSKVFDEIPERTLP YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKM HGYAIRKRMVSDIVI NALMDFYGNC DL SSINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           VSAYIEEGLLNEAM+VFHSMQSSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360
           XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLR+LGLGRA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420
           VHAYALKCELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKN+TLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           NS ALE FRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 NSQALERFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540
           XXXXXXXXXXXXXXXXXXXXXXXTGSLLNK IAFPVIP+TVT+TAALAACASLNLLHKGK
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600
           EIHGY                 NMYAKC +IDSAIQVFSRIKNRNVVCWNALIAGLLR M
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660
           QH++AVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNVDVGVLLHGI 678
           NVLSSDN DVGVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

[Close]
BLAST of CsaV3_6G035680 vs. NCBI nr
Match: XP_023546745.1 (pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717.6 bits (1851), Expect = 3.9e-203
Identity = 519/638 (81.35%), Postives = 546/638 (85.58%), Query Frame = 0 

Query: 39  MNVACRMHFHAVSAHNRPNCQFSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCR 98
           MNVACRMH  A+SAHNRP C+F+P+A   D N  G NVPI RSFALF+ + Q VKLN  R
Sbjct: 1   MNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARR 60

Query: 99  VDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRS 158
           VD+L G  L KF  K   CVDSD KVFDE+PER LPAY ALIRAYCRSEKWNELFAAF S
Sbjct: 61  VDSLIGNNLAKFCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120

Query: 159 MVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGD 218
           MV+EGILPDKYLVPTILKACS+RQ VKTGKM HGY IRKR+VSDI I NALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKRQAVKTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGD 180

Query: 219 LSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXX 278
           L  SINVFDSMSEKDVVSWTALVSAY+EEGLL+EAME FHSMQSSGLXXXXXXXXXXXXX
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGLXXXXXXXXXXXXX 240

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPN 338
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFINMLLFPENPN 300

Query: 339 SVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFA 398
           SVTVAS+LPACAGLR LGLGRAVHAYALKCELCTNIYVEGSLV+MYSKCGQDD AEEIFA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360

Query: 399 KAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXX 458
           KAEKKNITLWNEIIATY+NQG+ S ALE FRSMQHHGL XXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 420

Query: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIP 518
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   L++K I  P+ P
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACLVDKVITSPIRP 480

Query: 519 NTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVF 578
           N VT+TAALAACASLNLLHKGKEIHGY                 +MY+KC  IDS I+VF
Sbjct: 481 NIVTITAALAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCECIDSVIRVF 540

Query: 579 SRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLK 638
              KNRN VCWNALIAG  R MQ KMAVELFCQMLVEGIKPSS TFSIL PAL+ R DL 
Sbjct: 541 GGTKNRNEVCWNALIAGFRRIMQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLI 600

Query: 639 VRRQLHSYIIKSQHLESRNDLANVLSSDNVDVGVLLHG 677
            RRQLHSYIIKSQ + S NDLANVLSS+  D GVLLHG
Sbjct: 601 TRRQLHSYIIKSQLVISCNDLANVLSSNEFDGGVLLHG 637

[Close]
BLAST of CsaV3_6G035680 vs. NCBI nr
Match: XP_022131620.1 (pentatricopeptide repeat-containing protein At1g19720-like [Momordica charantia])

HSP 1 Score: 714.1 bits (1842), Expect = 4.4e-202
Identity = 525/675 (77.78%), Postives = 560/675 (82.96%), Query Frame = 0 

Query: 1   MATPVYGFASSNNAS--LRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNC 60
           MAT    F S NNAS  L  PS  K +FDL+P+  FSRNSMN+ CRMHF AVSAHN P  
Sbjct: 1   MATLKDAFLSPNNASPVLPYPSSSKLNFDLHPSLGFSRNSMNLNCRMHFTAVSAHNPPRG 60

Query: 61  QFSPIAIRTDRNCEGVNVPIPRSFALFDHS---------AQVVKLNDCRVDNLFGKKLTK 120
           QF P A   DRN  G N+PI RS  L + +         A VVK N  RVD+LFG KL K
Sbjct: 61  QFVPAAKSIDRNDVGSNIPIARSLVLLNSNFLSDSRQTRAHVVKSNVHRVDSLFGNKLPK 120

Query: 121 FYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKY 180
           F  +DVKCVDSD K+FDEIPERTLPAYAALIRAYCRS+KWNELFAAFRSMVDEGI PDKY
Sbjct: 121 FNAQDVKCVDSDCKLFDEIPERTLPAYAALIRAYCRSQKWNELFAAFRSMVDEGIQPDKY 180

Query: 181 LVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSM 240
           LVPTILKACS RQ+VKTGKM HG+ IRK  VSDI + NALM+FYGNCGDL SSI VFDSM
Sbjct: 181 LVPTILKACSGRQLVKTGKMVHGFVIRKTFVSDIFVGNALMNFYGNCGDLRSSIVVFDSM 240

Query: 241 SEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXX 300
           SEKDVVSWTALVSAY+EEGLL+EAMEVFH+MQSSGLXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 SEKDVVSWTALVSAYMEEGLLDEAMEVFHNMQSSGLXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPAC 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VFINML FPENPNSVTVASILPAC
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFINMLFFPENPNSVTVASILPAC 360

Query: 361 AGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWN 420
           AGLRD+GLGRA+HAYALK ELC N+YVEGSLVDMYSKCGQD  AE++FA+AEKKNITLWN
Sbjct: 361 AGLRDIGLGRAIHAYALKSELCVNLYVEGSLVDMYSKCGQDYCAEKVFARAEKKNITLWN 420

Query: 421 EIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           EIIA Y+NQGK S ALE FRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 EIIAAYVNQGKVSQALERFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAA 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG LLNK I  P+ PNTVT+TAALAA
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCLLNKVITLPIRPNTVTITAALAA 540

Query: 541 CASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCW 600
           CA LNL H+GKEIHGY                 + Y KC DIDSAI+VF RIKNRNVVCW
Sbjct: 541 CADLNLSHQGKEIHGYMLRNGFHDNHFISSALIDTYIKCEDIDSAIRVFRRIKNRNVVCW 600

Query: 601 NALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIK 660
           NALIAG ++  Q K+A+ELFC+MLVEGIKPSS T SIL PAL    DLKVRRQLHSYI K
Sbjct: 601 NALIAGHMKERQPKVAIELFCEMLVEGIKPSSVTLSILPPALDLGVDLKVRRQLHSYITK 660

Query: 661 SQHLESRNDLANVLS 665
           SQ LE  NDLANV S
Sbjct: 661 SQLLEWCNDLANVSS 675

[Close]
BLAST of CsaV3_6G035680 vs. NCBI nr
Match: XP_022997077.1 (pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita maxima])

HSP 1 Score: 708.0 bits (1826), Expect = 3.1e-200
Identity = 516/639 (80.75%), Postives = 548/639 (85.76%), Query Frame = 0 

Query: 39  MNVACRMHFHAVSAHNRPNCQFSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCR 98
           MNVACRMH  A+SAHNR  C+F+P+A   D N  G NVPI RSFALF+ + Q VKLN  R
Sbjct: 1   MNVACRMHSTAISAHNRSQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQFVKLNARR 60

Query: 99  VDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRS 158
           VD+L G KL K   K   CVDSD KVFDE+PER LPAY ALIRAYCRSEKWNELFAAF S
Sbjct: 61  VDSLIGNKLAKVCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120

Query: 159 MVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGD 218
           MV+EGILPDKYLVPTILKACS+ Q VKTGKM HGYAIRKR+VSDI I NALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKIQAVKTGKMIHGYAIRKRLVSDIFIGNALMDFYGNCGD 180

Query: 219 LSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXX 278
           L  SINVFDSMSEKDVVSWTALVSAY+EEGLL+EAME FHSMQSSG XXXXXXXXXXXXX
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 240

Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPN 338
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 300

Query: 339 SVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFA 398
           SVTVAS+LPACAGLR LGLGRAVHAYALKCELCTNIYVEGSLV+MYSKCGQDD AEEIFA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360

Query: 399 KAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXX 458
           KAEKKNITLWNEIIATY+NQG+ S ALE FRSMQHHGL XXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 420

Query: 459 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIP 518
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT  L++K I  P+ P
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 480

Query: 519 N-TVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQV 578
           N  +T+TAALAACASLNLLHKGKEIHGY                 +MY+KC  IDS IQV
Sbjct: 481 NIVITITAALAACASLNLLHKGKEIHGYMLRNGFEDNHIVSSALIDMYSKCECIDSVIQV 540

Query: 579 FSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADL 638
           F  IKNRN VCWNALIAG  R MQ KMAVELFCQMLVEGIKPSS +FSILLPAL+ R DL
Sbjct: 541 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDSFSILLPALA-RTDL 600

Query: 639 KVRRQLHSYIIKSQHLESRNDLANVLSSDNVDVGVLLHG 677
            +RRQLHSYIIKSQ +ES +DL+ VLSS+  D GV+LHG
Sbjct: 601 IMRRQLHSYIIKSQLVESCDDLSYVLSSNEFDGGVMLHG 638

[Close]
BLAST of CsaV3_6G035680 vs. TAIR10
Match: AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 7.2e-42
Identity = 249/548 (45.44%), Postives = 328/548 (59.85%), Query Frame = 0 

Query: 106 KLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGIL 165
           KL   Y K   C+    KVFD + ER L  ++A+I AY R  +W E+   FR M+ +G+L
Sbjct: 120 KLLSMYAK-CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 179

Query: 166 PDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINV 225
           PD +L P IL+ C+    V+ GK+ H   I+  M S + + N+++  Y  CG+L  +   
Sbjct: 180 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 239

Query: 226 FDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXX 285
           F  M E+DV++W +++ AY + G   EA+E+   M+  G+   XXXXXXXXXXXXXXXXX
Sbjct: 240 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGXXXXXXXXXXXXXXXXX 299

Query: 286 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASI 345
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     
Sbjct: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359

Query: 346 LPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNI 405
             AC+ L+ +  G  VH+ A+K     ++ V  SLVDMYSKCG+ + A ++F   + K++
Sbjct: 360 XXACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 419

Query: 406 TLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 465
             WN +I  Y   G    A E F  MQ    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 420 YTWNSMITGYCQAGYCGKAYELFTRMQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479

Query: 466 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTA 525
           XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +         PN+VT+ +
Sbjct: 480 XXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFM---------PNSVTILS 539

Query: 526 ALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRN 585
            L ACA+L      +EIHG                  + YAK GDI+ +  +F  ++ ++
Sbjct: 540 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 599

Query: 586 VVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHS 645
           ++ WN+LI G +    +  A+ LF QM  +GI P+  T S ++ A     ++   +++  
Sbjct: 600 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 657

Query: 646 YIIKSQHL 654
            I    H+
Sbjct: 660 SIANDYHI 657

[Close]
BLAST of CsaV3_6G035680 vs. TAIR10
Match: AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 169.1 bits (427), Expect = 9.5e-42
Identity = 128/535 (23.93%), Postives = 208/535 (38.88%), Query Frame = 0 

Query: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGI--LPDKYLVPTILKACSR 182
           K+F+E+P+ +L +Y  +IR Y R   +++  + F  MV EG+  +PD Y  P + KA   
Sbjct: 70  KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129

Query: 183 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 242
            + +K G + HG  +R     D  ++NAL+  Y N G +  + +VFD M  +DV+SW  +
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189

Query: 243 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           +S Y   G +N+A+ +F  M +  +                                   
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESV----------------------------------- 249

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 362
                                              + +  T+ S+LP C  L+DL +GR 
Sbjct: 250 -----------------------------------DLDHATIVSMLPVCGHLKDLEMGRN 309

Query: 363 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 422
           VH    +  L   I V+ +LV+MY KCG+ D A  +F + E++++  W  +I  Y   G 
Sbjct: 310 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 369

Query: 423 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 482
              ALE  R MQ  G                                             
Sbjct: 370 VENALELCRLMQFEG--------------------------------------------- 429

Query: 483 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 542
                                              V PN VT+ + ++ C     ++ GK
Sbjct: 430 -----------------------------------VRPNAVTIASLVSVCGDALKVNDGK 454

Query: 543 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 602
            +HG+                 +MYAKC  +D   +VFS     +   W+A+IAG ++  
Sbjct: 490 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 454

Query: 603 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLES 656
               A+ LF +M  E ++P+ AT + LLPA +  ADL+    +H Y+ K+  + S
Sbjct: 550 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454

[Close]
BLAST of CsaV3_6G035680 vs. TAIR10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 4.4e-39
Identity = 98/343 (28.57%), Postives = 156/343 (45.48%), Query Frame = 0 

Query: 94  LNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELF 153
           L D R ++  G KL + Y   +K V S  KVFDEIPER +     +IR+Y  +  + E  
Sbjct: 67  LEDLRCNSSLGVKLMRAYA-SLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGV 126

Query: 154 AAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFY 213
             F +M    + PD Y  P +LKACS    +  G+  HG A +  + S + + N L+  Y
Sbjct: 127 KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMY 186

Query: 214 GNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXX 273
           G CG LS +  V D MS +DVVSW +LV  Y +    ++A+EV   M+S  +        
Sbjct: 187 GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES--VKISHDAGT 246

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLF 333
                                                              +++  M   
Sbjct: 247 MASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 306

Query: 334 PENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRA 393
              P++V++ S+LPAC     L LG+ +H Y  + +L  N+ +E +L+DMY+KCG  ++A
Sbjct: 307 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 366

Query: 394 EEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGL 437
            ++F   + +++  W  +I+ Y   G+   A+  F  +Q  GL
Sbjct: 367 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

[Close]
BLAST of CsaV3_6G035680 vs. TAIR10
Match: AT4G18520.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 3.7e-38
Identity = 129/528 (24.43%), Postives = 198/528 (37.50%), Query Frame = 0 

Query: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGI-LPDKYLVPTILKACSRR 182
           KVFD +PE+    + A+I  Y +    +E FA F   V  GI   ++ +   +L  CSRR
Sbjct: 138 KVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRR 197

Query: 183 QMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALV 242
              + G+  HG  + K  V ++++E++L+ FY  CG+L+S++  FD M EKDV+SWTA++
Sbjct: 198 AEFELGRQVHGNMV-KVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVI 257

Query: 243 SAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           SA   +G         H +++ G+                                    
Sbjct: 258 SACSRKG---------HGIKAIGM------------------------------------ 317

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRAV 362
                                    FI ML     PN  TV SIL AC+  + L  GR V
Sbjct: 318 -------------------------FIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 377

Query: 363 HAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGKN 422
           H+  +K  + T+++V  SL+DMY+KCG+     ++F     +N   W  IIA +  +G  
Sbjct: 378 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 437

Query: 423 SWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 482
             A+  FR M+   L                                             
Sbjct: 438 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 497

Query: 483 XXXXXXXXXXXXXXXXXXXXXXTG---------------------SLLNKTIAFPVIPNT 542
                                                          L + I   V PN 
Sbjct: 498 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 557

Query: 543 VTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSR 602
            T ++AL ACA+   L  G+ IH                   +MYAKCG +  A +VF  
Sbjct: 558 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 594

Query: 603 IKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 629
           +  +N+V W A+I G  R    + A++L  +M  EG +     F+ +L
Sbjct: 618 MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594

[Close]
BLAST of CsaV3_6G035680 vs. TAIR10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 156.0 bits (393), Expect = 8.3e-38
Identity = 138/556 (24.82%), Postives = 205/556 (36.87%), Query Frame = 0 

Query: 116 KCVDSDS--KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT 175
           KC D  +  KVFD I ER   ++ +LI + C  EKW     AFR M+DE + P  + + +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204

Query: 176 ILKACSRRQM---VKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMS 235
           ++ ACS   M   +  GK  H Y +RK  ++  +I N L+  YG  G L+SS  +  S  
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFG 264

Query: 236 EKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXX 295
            +D+V+W  ++S+  +   L EA+E    M   G+                         
Sbjct: 265 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV------------------------- 324

Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACA 355
                                                         P+  T++S+LPAC+
Sbjct: 325 ---------------------------------------------EPDEFTISSVLPACS 384

Query: 356 GLRDLGLGRAVHAYALK-CELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWN 415
            L  L  G+ +HAYALK   L  N +V  +LVDMY  C Q      +F     + I LWN
Sbjct: 385 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 444

Query: 416 EIIATYMNQGKNSWALEHFRSMQHH-----------GLXXXXXXXXXXXXXXXXXXXXXX 475
            +IA Y     +  AL  F  M+             G+                      
Sbjct: 445 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 504

Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG-----------SL 535
                                                        TG            L
Sbjct: 505 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 564

Query: 536 LNK-----------TIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXX 595
           L+K                + PN++TL   L +CA+L+ L KGKEIH Y           
Sbjct: 565 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 624

Query: 596 XXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEG 633
                 +MYAKCG +  + +VF +I  +NV+ WN +I         + A++L   M+V+G
Sbjct: 625 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 629

[Close]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match: sp|Q9FXH1|PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-40
Identity = 249/548 (45.44%), Postives = 328/548 (59.85%), Query Frame = 0 

Query: 106 KLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGIL 165
           KL   Y K   C+    KVFD + ER L  ++A+I AY R  +W E+   FR M+ +G+L
Sbjct: 120 KLLSMYAK-CGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 179

Query: 166 PDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINV 225
           PD +L P IL+ C+    V+ GK+ H   I+  M S + + N+++  Y  CG+L  +   
Sbjct: 180 PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKF 239

Query: 226 FDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXX 285
           F  M E+DV++W +++ AY + G   EA+E+   M+  G+   XXXXXXXXXXXXXXXXX
Sbjct: 240 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGXXXXXXXXXXXXXXXXX 299

Query: 286 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASI 345
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     
Sbjct: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 359

Query: 346 LPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNI 405
             AC+ L+ +  G  VH+ A+K     ++ V  SLVDMYSKCG+ + A ++F   + K++
Sbjct: 360 XXACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 419

Query: 406 TLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 465
             WN +I  Y   G    A E F  MQ    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 420 YTWNSMITGYCQAGYCGKAYELFTRMQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 479

Query: 466 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTA 525
           XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +         PN+VT+ +
Sbjct: 480 XXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFM---------PNSVTILS 539

Query: 526 ALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRN 585
            L ACA+L      +EIHG                  + YAK GDI+ +  +F  ++ ++
Sbjct: 540 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 599

Query: 586 VVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHS 645
           ++ WN+LI G +    +  A+ LF QM  +GI P+  T S ++ A     ++   +++  
Sbjct: 600 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFY 657

Query: 646 YIIKSQHL 654
            I    H+
Sbjct: 660 SIANDYHI 657

[Close]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match: sp|Q9FLZ9|PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.7e-40
Identity = 128/535 (23.93%), Postives = 208/535 (38.88%), Query Frame = 0 

Query: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGI--LPDKYLVPTILKACSR 182
           K+F+E+P+ +L +Y  +IR Y R   +++  + F  MV EG+  +PD Y  P + KA   
Sbjct: 70  KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129

Query: 183 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 242
            + +K G + HG  +R     D  ++NAL+  Y N G +  + +VFD M  +DV+SW  +
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189

Query: 243 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           +S Y   G +N+A+ +F  M +  +                                   
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESV----------------------------------- 249

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 362
                                              + +  T+ S+LP C  L+DL +GR 
Sbjct: 250 -----------------------------------DLDHATIVSMLPVCGHLKDLEMGRN 309

Query: 363 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 422
           VH    +  L   I V+ +LV+MY KCG+ D A  +F + E++++  W  +I  Y   G 
Sbjct: 310 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 369

Query: 423 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 482
              ALE  R MQ  G                                             
Sbjct: 370 VENALELCRLMQFEG--------------------------------------------- 429

Query: 483 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 542
                                              V PN VT+ + ++ C     ++ GK
Sbjct: 430 -----------------------------------VRPNAVTIASLVSVCGDALKVNDGK 454

Query: 543 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 602
            +HG+                 +MYAKC  +D   +VFS     +   W+A+IAG ++  
Sbjct: 490 CLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 454

Query: 603 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLES 656
               A+ LF +M  E ++P+ AT + LLPA +  ADL+    +H Y+ K+  + S
Sbjct: 550 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS 454

[Close]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match: sp|P0C899|PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.9e-38
Identity = 98/343 (28.57%), Postives = 156/343 (45.48%), Query Frame = 0 

Query: 94  LNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEKWNELF 153
           L D R ++  G KL + Y   +K V S  KVFDEIPER +     +IR+Y  +  + E  
Sbjct: 67  LEDLRCNSSLGVKLMRAYA-SLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGV 126

Query: 154 AAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFY 213
             F +M    + PD Y  P +LKACS    +  G+  HG A +  + S + + N L+  Y
Sbjct: 127 KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMY 186

Query: 214 GNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXX 273
           G CG LS +  V D MS +DVVSW +LV  Y +    ++A+EV   M+S  +        
Sbjct: 187 GKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES--VKISHDAGT 246

Query: 274 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLF 333
                                                              +++  M   
Sbjct: 247 MASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 306

Query: 334 PENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRA 393
              P++V++ S+LPAC     L LG+ +H Y  + +L  N+ +E +L+DMY+KCG  ++A
Sbjct: 307 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 366

Query: 394 EEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGL 437
            ++F   + +++  W  +I+ Y   G+   A+  F  +Q  GL
Sbjct: 367 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGL 406

[Close]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match: sp|Q0WNP3|PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A2 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 6.7e-37
Identity = 129/528 (24.43%), Postives = 198/528 (37.50%), Query Frame = 0 

Query: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGI-LPDKYLVPTILKACSRR 182
           KVFD +PE+    + A+I  Y +    +E FA F   V  GI   ++ +   +L  CSRR
Sbjct: 138 KVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRR 197

Query: 183 QMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALV 242
              + G+  HG  + K  V ++++E++L+ FY  CG+L+S++  FD M EKDV+SWTA++
Sbjct: 198 AEFELGRQVHGNMV-KVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVI 257

Query: 243 SAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           SA   +G         H +++ G+                                    
Sbjct: 258 SACSRKG---------HGIKAIGM------------------------------------ 317

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRAV 362
                                    FI ML     PN  TV SIL AC+  + L  GR V
Sbjct: 318 -------------------------FIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 377

Query: 363 HAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGKN 422
           H+  +K  + T+++V  SL+DMY+KCG+     ++F     +N   W  IIA +  +G  
Sbjct: 378 HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFG 437

Query: 423 SWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 482
             A+  FR M+   L                                             
Sbjct: 438 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 497

Query: 483 XXXXXXXXXXXXXXXXXXXXXXTG---------------------SLLNKTIAFPVIPNT 542
                                                          L + I   V PN 
Sbjct: 498 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 557

Query: 543 VTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSR 602
            T ++AL ACA+   L  G+ IH                   +MYAKCG +  A +VF  
Sbjct: 558 FTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDS 594

Query: 603 IKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 629
           +  +N+V W A+I G  R    + A++L  +M  EG +     F+ +L
Sbjct: 618 MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATIL 594

[Close]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match: sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 1.5e-36
Identity = 138/556 (24.82%), Postives = 205/556 (36.87%), Query Frame = 0 

Query: 116 KCVDSDS--KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT 175
           KC D  +  KVFD I ER   ++ +LI + C  EKW     AFR M+DE + P  + + +
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204

Query: 176 ILKACSRRQM---VKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMS 235
           ++ ACS   M   +  GK  H Y +RK  ++  +I N L+  YG  G L+SS  +  S  
Sbjct: 205 VVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NTLVAMYGKLGKLASSKVLLGSFG 264

Query: 236 EKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXX 295
            +D+V+W  ++S+  +   L EA+E    M   G+                         
Sbjct: 265 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV------------------------- 324

Query: 296 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACA 355
                                                         P+  T++S+LPAC+
Sbjct: 325 ---------------------------------------------EPDEFTISSVLPACS 384

Query: 356 GLRDLGLGRAVHAYALK-CELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWN 415
            L  L  G+ +HAYALK   L  N +V  +LVDMY  C Q      +F     + I LWN
Sbjct: 385 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN 444

Query: 416 EIIATYMNQGKNSWALEHFRSMQHH-----------GLXXXXXXXXXXXXXXXXXXXXXX 475
            +IA Y     +  AL  F  M+             G+                      
Sbjct: 445 AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVK 504

Query: 476 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG-----------SL 535
                                                        TG            L
Sbjct: 505 RGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLL 564

Query: 536 LNK-----------TIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXX 595
           L+K                + PN++TL   L +CA+L+ L KGKEIH Y           
Sbjct: 565 LHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA 624

Query: 596 XXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEG 633
                 +MYAKCG +  + +VF +I  +NV+ WN +I         + A++L   M+V+G
Sbjct: 625 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQG 629

[Close]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match: tr|A0A0A0KFW8|A0A0A0KFW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 3.2e-294
Identity = 677/677 (100.00%), Postives = 677/677 (100.00%), Query Frame = 0 

Query: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60
           MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF
Sbjct: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60

Query: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120
           SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS
Sbjct: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120

Query: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR
Sbjct: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180

Query: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360
           XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360

Query: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420
           VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420

Query: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540
           XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540

Query: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600
           EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM
Sbjct: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600

Query: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660
           QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA
Sbjct: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNVDVGVLLHGI 678
           NVLSSDNVDVGVLLHGI
Sbjct: 661 NVLSSDNVDVGVLLHGI 677

[Close]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match: tr|A0A1S3BDB0|A0A1S3BDB0_CUCME (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=3656 GN=LOC103488425 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 4.7e-269
Identity = 621/677 (91.73%), Postives = 636/677 (93.94%), Query Frame = 0 

Query: 1   MATPVYGFASSNNASLRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQF 60
           MATP+ GF SSNNAS RLPSFPKFHFDLYPNSSFSRNSMNVACRMHF+AV A NRPNCQF
Sbjct: 1   MATPLDGFVSSNNASPRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQF 60

Query: 61  SPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDS 120
           SPIAIRTD  CEGVNVPIP SF LFDH++QVVKLN CRVDNLFGKKLTKFYVKDVKCVD 
Sbjct: 61  SPIAIRTD--CEGVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVDG 120

Query: 121 DSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSR 180
           DSKVFDEIPERTLP YAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPT+LKACSR
Sbjct: 121 DSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACSR 180

Query: 181 RQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTAL 240
           RQMVKTGKM HGYAIRKRMVSDIVI NALMDFYGNC DL SSINVFDSMSEKDVVSWTAL
Sbjct: 181 RQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTAL 240

Query: 241 VSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           VSAYIEEGLLNEAM+VFHSMQSSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 VSAYIEEGLLNEAMKVFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGRA 360
           XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLR+LGLGRA
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRNLGLGRA 360

Query: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQGK 420
           VHAYALKCELCTNIYVEGSLVDMYSKCGQDD AEE+FAKAEKKN+TLWNEIIATY+NQGK
Sbjct: 361 VHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQGK 420

Query: 421 NSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           NS ALE FRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 NSQALERFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKGK 540
           XXXXXXXXXXXXXXXXXXXXXXXTGSLLNK IAFPVIP+TVT+TAALAACASLNLLHKGK
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKGK 540

Query: 541 EIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRTM 600
           EIHGY                 NMYAKC +IDSAIQVFSRIKNRNVVCWNALIAGLLR M
Sbjct: 541 EIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRIM 600

Query: 601 QHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660
           QH++AVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA
Sbjct: 601 QHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDLA 660

Query: 661 NVLSSDNVDVGVLLHGI 678
           NVLSSDN DVGVLLHGI
Sbjct: 661 NVLSSDNFDVGVLLHGI 675

[Close]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match: tr|A0A2P4M1A3|A0A2P4M1A3_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_48169 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 3.4e-126
Identity = 359/576 (62.33%), Postives = 427/576 (74.13%), Query Frame = 0 

Query: 89  AQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEK 148
           AQ +KLN    ++L G KLT  Y K+ + +    KVFD+IPERT+ AYAALIRA+CR E+
Sbjct: 97  AQALKLNAFESNSLIGNKLTILYSKNKESLKIALKVFDDIPERTVSAYAALIRAFCRLEQ 156

Query: 149 WNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENA 208
           W ELF+ F SM+DEG+LP+KYLVPTILKACS  +M ++GKM HGY IRK + SD+ + NA
Sbjct: 157 WEELFSVFGSMIDEGMLPNKYLVPTILKACSAMEMFRSGKMIHGYVIRKELESDVYVGNA 216

Query: 209 LMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXX 268
           L+D Y NC DL  S NVFDSM E+DVVSWTAL+SA ++EG L+EAME+FHSMQ +G+ XX
Sbjct: 217 LIDLYANCADLRLSRNVFDSMKERDVVSWTALISACMDEGYLDEAMEIFHSMQLNGVNXX 276

Query: 269 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFI 328
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD F 
Sbjct: 277 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAFS 336

Query: 329 NMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCG 388
           NML FPE+PNS+T+ASILPACAGL+DL LGRAVH YALKCELC N++VEGSL+DMY+KCG
Sbjct: 337 NMLCFPEDPNSITIASILPACAGLKDLNLGRAVHGYALKCELCRNVHVEGSLIDMYAKCG 396

Query: 389 QDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXX 448
           + D AE++F K E KN  +WNE+IA Y+N  K   ALE  R M+  GL            
Sbjct: 397 RIDYAEKVFVKVENKNTAMWNEMIAAYLNDRKME-ALELLRLMKKDGLRPDVITYNTLLA 456

Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLL 508
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         G  L
Sbjct: 457 GNARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFQIMQSNGCFL 516

Query: 509 NKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKC 568
           N+ +     PN VT T ALAACA LNLL +GKEIHGY                 +MY KC
Sbjct: 517 NQVLV-ATSPNAVTTTGALAACADLNLLKQGKEIHGYALRNGFESNIYVSSALIDMYMKC 576

Query: 569 GDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 628
            ++D A QVF R++NRN +C N LIAG +   Q + A++LF +ML+EG+KPSS TF ILL
Sbjct: 577 HNMDLATQVFRRLENRNTICLNILIAGHVSNAQLEEALQLFNEMLLEGLKPSSITFFILL 636

Query: 629 PALSERADLKVRRQLHSYIIKSQHL-ESRNDLANVL 664
           PA  +   L+V R+LH YIIK+Q + +S + LA+ L
Sbjct: 637 PACGDMGALRVGRELHGYIIKNQFVDDSNSSLASAL 670

[Close]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match: tr|A0A2P4N7Y8|A0A2P4N7Y8_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_74620 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 3.7e-125
Identity = 370/576 (64.24%), Postives = 438/576 (76.04%), Query Frame = 0 

Query: 89  AQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEK 148
           AQ +KLN    ++L G KLT  Y K+ + +    KVFD+IPERT+ AYAALIRA+CR E+
Sbjct: 97  AQALKLNAFESNSLIGNKLTILYSKNKESLKIALKVFDDIPERTVSAYAALIRAFCRLEQ 156

Query: 149 WNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENA 208
           W ELF+ F SM+DEG+LP+KYLVPTILKACS  +M ++GKM HGY IRK + SD+ + NA
Sbjct: 157 WEELFSVFGSMIDEGMLPNKYLVPTILKACSAMEMFRSGKMIHGYVIRKELESDVYVGNA 216

Query: 209 LMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXX 268
           L+D Y NC DL  S NVFDSM E+DVVSWTAL+SA ++EG L+EAME+FHSMQ +G+ XX
Sbjct: 217 LIDLYANCADLRLSRNVFDSMKERDVVSWTALISACMDEGYLDEAMEIFHSMQLNGVNXX 276

Query: 269 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFI 328
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD F 
Sbjct: 277 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAFS 336

Query: 329 NMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCG 388
           NML FPE+PNSVT+ASILPACAGL+DL LGRAVH YALK ELC N++VEGSL+DMY+KCG
Sbjct: 337 NMLCFPEDPNSVTIASILPACAGLKDLNLGRAVHGYALKWELCRNVHVEGSLIDMYAKCG 396

Query: 389 QDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXX 448
           + D AE++F K E KN  +WNE+IA  +N+ K   ALE  R M+  GL     XXXXXXX
Sbjct: 397 RIDYAEKVFVKVENKNTAMWNEMIAACVNERKMKEALELLRLMKKDGLRPDVIXXXXXXX 456

Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLL 508
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        G  L
Sbjct: 457 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFQIMQSNGCFL 516

Query: 509 NKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKC 568
           N+ +     PN VT T ALAACA LNLL +GKEIHGY                 +MY KC
Sbjct: 517 NQ-VLMATSPNAVTTTGALAACADLNLLKQGKEIHGYALRNGFESNIYVSSALIDMYMKC 576

Query: 569 GDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 628
            ++D A QVF R++NRN +C N LIAG +   Q + A++LF +ML+EG+KPSS TF ILL
Sbjct: 577 HNMDLATQVFRRLENRNTICLNILIAGHVSNAQLEEALQLFNEMLLEGLKPSSITFFILL 636

Query: 629 PALSERADLKVRRQLHSYIIKSQHL-ESRNDLANVL 664
           PA  +   L+V R+LH YIIK+Q + +S + LA+ L
Sbjct: 637 PACGDMGALRVGRELHGYIIKNQFVDDSNSSLASAL 671

[Close]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match: tr|A0A2N9G708|A0A2N9G708_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23200 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 5.6e-121
Identity = 365/588 (62.07%), Postives = 438/588 (74.49%), Query Frame = 0 

Query: 89  AQVVKLNDCRVDNLFGKKLTKFYVKDVKCVDSDSKVFDEIPERTLPAYAALIRAYCRSEK 148
           A  VKLN    + L G KLT  Y K+ + +    KVFDEIPERT+P Y ALIRA+CR E+
Sbjct: 102 AHAVKLNAFESNRLIGNKLTILYSKNNESLKIARKVFDEIPERTVPGYVALIRAFCRLEQ 161

Query: 149 WNELFAAFRSMVDEGILPDKYLVPTILKACSRRQMVKTGKMAHGYAIRKRMVSDIVIENA 208
           W++LF+ F SMVD+G+LP+KYLVPTILKACS  Q++++GKM HGY IRK +  DI + NA
Sbjct: 162 WDDLFSVFGSMVDDGLLPNKYLVPTILKACSAMQILRSGKMIHGYVIRKELDLDIFVGNA 221

Query: 209 LMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIEEGLLNEAMEVFHSMQSSGLXXX 268
           L+D Y NC DL  S +VFD+M E+DVVSWTALVSAY+ EG L+EAME+FHSMQS+G+XXX
Sbjct: 222 LIDLYANCADLRLSRSVFDTMKERDVVSWTALVSAYMVEGHLDEAMEIFHSMQSNGVXXX 281

Query: 269 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVFI 328
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 282 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 341

Query: 329 NMLLFPENPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCG 388
             + FP +PN VT+ASILPACAGL+DL LGRAVH YALK ELC N++VEGSL+DMY+KCG
Sbjct: 342 XXVCFPVDPNFVTIASILPACAGLKDLNLGRAVHGYALKRELCGNVHVEGSLIDMYAKCG 401

Query: 389 QDDRAEEIFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSMQHHGLXXXXXXXXXXXX 448
           + D A ++F K + KN  +WNE+IA Y+N+ K   AL+  R M+++G       XXXXXX
Sbjct: 402 RTDSAVKLFVKVDNKNTAMWNEMIAAYVNESKMEEALKILRLMKNNGFRPDVITXXXXXX 461

Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSLL 508
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G  L
Sbjct: 462 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNMQSNGYFL 521

Query: 509 NKTIAFPVIPNTVTLTAALAACASLNLLHKGKEIHGYXXXXXXXXXXXXXXXXXNMYAKC 568
           N+ +     PN VT T ALAACA LNLL +GKEIHGY                 +MY KC
Sbjct: 522 NQVLILSNRPNAVTTTGALAACADLNLLPQGKEIHGYALRNGFESNIFVSSALIDMYVKC 581

Query: 569 GDIDSAIQVFSRIKNRNVVCWNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 628
            ++D A QVF R++NRN +CWNALIAG +   Q + A+ELF +ML+EG++PSS TF  LL
Sbjct: 582 HNMDLATQVFRRLENRNTICWNALIAGHVSNAQLEEALELFNEMLLEGLQPSSITFLTLL 641

Query: 629 PALSERADLKVRRQLHSYIIKSQ--HLESRNDLANVLSSDNVDVGVLL 675
           PA  ++  L+V R+LH YIIK+Q    +S + LA+ L       G +L
Sbjct: 642 PACGDKGTLRVGRELHGYIIKNQFDFDDSNSTLASALIGMYAKCGSIL 689

The following BLAST results are available for this feature:
BLAST of CsaV3_6G035680 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146805.14.8e-294100.00PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis s... [more]
XP_008445371.17.0e-26991.73PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis m... [more]
XP_023546745.13.9e-20381.35pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita pepo subsp... [more]
XP_022131620.14.4e-20277.78pentatricopeptide repeat-containing protein At1g19720-like [Momordica charantia][more]
XP_022997077.13.1e-20080.75pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita maxima][more]
BLAST of CsaV3_6G035680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G19720.17.2e-4245.44Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39350.19.5e-4223.93Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49142.14.4e-3928.57Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G18520.13.7e-3824.43Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G57430.18.3e-3824.82Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_6G035680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FXH1|PPR52_ARATH1.3e-4045.44Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... [more]
sp|Q9FLZ9|PP405_ARATH1.7e-4023.93Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX... [more]
sp|P0C899|PP271_ARATH7.9e-3828.57Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
sp|Q0WNP3|PP319_ARATH6.7e-3724.43Pentatricopeptide repeat-containing protein At4g18520, chloroplastic OS=Arabidop... [more]
sp|Q7Y211|PP285_ARATH1.5e-3624.82Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
BLAST of CsaV3_6G035680 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KFW8|A0A0A0KFW8_CUCSA3.2e-294100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1[more]
tr|A0A1S3BDB0|A0A1S3BDB0_CUCME4.7e-26991.73pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=36... [more]
tr|A0A2P4M1A3|A0A2P4M1A3_QUESU3.4e-12662.33Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_4... [more]
tr|A0A2P4N7Y8|A0A2P4N7Y8_QUESU3.7e-12564.24Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_7... [more]
tr|A0A2N9G708|A0A2N9G708_FAGSY5.6e-12162.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23200 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G035680.1CsaV3_6G035680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 135..295
e-value: 2.6E-37
score: 130.8
coord: 403..510
e-value: 1.5E-23
score: 85.6
coord: 511..665
e-value: 3.0E-27
score: 97.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 232..269
e-value: 7.5E-9
score: 35.5
coord: 438..485
e-value: 2.7E-13
score: 49.8
coord: 584..631
e-value: 4.6E-13
score: 49.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 379..405
e-value: 0.33
score: 11.2
coord: 270..300
e-value: 4.6E-4
score: 20.2
coord: 136..164
e-value: 0.0038
score: 17.3
coord: 306..331
e-value: 8.5E-5
score: 22.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 235..268
e-value: 1.4E-8
score: 32.3
coord: 306..331
e-value: 1.8E-4
score: 19.5
coord: 270..302
e-value: 5.5E-6
score: 24.2
coord: 441..475
e-value: 7.6E-8
score: 30.1
coord: 135..167
e-value: 1.2E-6
score: 26.3
coord: 560..587
e-value: 8.5E-4
score: 17.3
coord: 587..620
e-value: 2.2E-6
score: 25.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 404..438
score: 9.547
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 13.154
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 8.462
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 474..508
score: 7.541
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 439..473
score: 12.792
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 554..584
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 585..619
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..403
score: 7.18
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 132..166
score: 10.896
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 519..553
score: 6.193
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 202..232
score: 7.706
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 11.641
NoneNo IPR availablePANTHERPTHR24015:SF1589SUBFAMILY NOT NAMEDcoord: 585..656
coord: 123..266
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 585..656
NoneNo IPR availablePANTHERPTHR24015:SF1589SUBFAMILY NOT NAMEDcoord: 439..632
coord: 200..444
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 439..632
coord: 200..444
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 123..266

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_6G035680CSPI06G20660Wild cucumber (PI 183967)cpicucB363
CsaV3_6G035680Cucsa.005010Cucumber (Gy14) v1cgycucB053
CsaV3_6G035680CmaCh12G001360Cucurbita maxima (Rimu)cmacucB0225
CsaV3_6G035680CmaCh05G004760Cucurbita maxima (Rimu)cmacucB0956
CsaV3_6G035680CmoCh05G004990Cucurbita moschata (Rifu)cmocucB0943
CsaV3_6G035680Cp4.1LG11g04230Cucurbita pepo (Zucchini)cpecucB0138
CsaV3_6G035680Carg09234Silver-seed gourdcarcucB0165
CsaV3_6G035680Cla022070Watermelon (97103) v1cucwmB497
CsaV3_6G035680ClCG08G010850Watermelon (Charleston Gray)cucwcgB530
CsaV3_6G035680Lsi08G009390Bottle gourd (USVL1VR-Ls)cuclsiB513
CsaV3_6G035680Cla97C08G153750Watermelon (97103) v2cucwmbB520
CsaV3_6G035680Bhi04G000598Wax gourdcucwgoB602
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_6G035680Cucumber (Gy14) v2cgybcucB298
CsaV3_6G035680Melon (DHL92) v3.5.1cucmeB488
CsaV3_6G035680Melon (DHL92) v3.6.1cucmedB476