BLAST of Carg09234 vs. NCBI nr
Match:
XP_023546745.1 (pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 958.0 bits (2475), Expect = 1.7e-275
Identity = 622/637 (97.65%), Postives = 626/637 (98.27%), Query Frame = 0
Query: 40 MNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARR 99
MNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARR
Sbjct: 1 MNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARR 60
Query: 100 VDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 159
VDSLIGNNLAKFC KCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS
Sbjct: 61 VDSLIGNNLAKFCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120
Query: 160 MVEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGD 219
MVEEGILPDKYLVPTILKACS RQAVKTGKM+HGY IRKRLVSDIFIGNALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKRQAVKTGKMIHGYVIRKRLVSDIFIGNALMDFYGNCGD 180
Query: 220 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 279
LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSG XXXXXXXXXXXXX
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGLXXXXXXXXXXXXX 240
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 339
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFINMLLFPENPN 300
Query: 340 SVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 399
SVTVASVLPACAGLRYLGLGRAVHAY LKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360
Query: 400 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 459
KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 420
Query: 460 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 519
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ACLVDKVITSPIRP
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACLVDKVITSPIRP 480
Query: 520 NIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVF 579
NIVTITA LAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKC+CIDSVIRVF
Sbjct: 481 NIVTITAALAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCECIDSVIRVF 540
Query: 580 GGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLIM 639
GG KNRNEVCWNALIAGFRR+MQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLI
Sbjct: 541 GGTKNRNEVCWNALIAGFRRIMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLIT 600
Query: 640 RRQLHSYIIKSQLVGSCDDLANVLSSNEFDGGVLLHG 677
RRQLHSYIIKSQLV SC+DLANVLSSNEFDGGVLLHG
Sbjct: 601 RRQLHSYIIKSQLVISCNDLANVLSSNEFDGGVLLHG 637
BLAST of Carg09234 vs. NCBI nr
Match:
XP_022997077.1 (pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita maxima])
HSP 1 Score: 939.9 bits (2428), Expect = 4.9e-270
Identity = 617/638 (96.71%), Postives = 625/638 (97.96%), Query Frame = 0
Query: 40 MNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARR 99
MNVACRMHSTAISAHNR QCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQ VKLNARR
Sbjct: 1 MNVACRMHSTAISAHNRSQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQFVKLNARR 60
Query: 100 VDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 159
VDSLIGN LAK C KCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS
Sbjct: 61 VDSLIGNKLAKVCAKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 120
Query: 160 MVEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGD 219
MVEEGILPDKYLVPTILKACS QAVKTGKM+HGYAIRKRLVSDIFIGNALMDFYGNCGD
Sbjct: 121 MVEEGILPDKYLVPTILKACSKIQAVKTGKMIHGYAIRKRLVSDIFIGNALMDFYGNCGD 180
Query: 220 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 279
LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX
Sbjct: 181 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 240
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 339
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 300
Query: 340 SVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 399
SVTVASVLPACAGLRYLGLGRAVHAY LKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA
Sbjct: 301 SVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 360
Query: 400 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 459
KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 420
Query: 460 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 519
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 480
Query: 520 NIV-TITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRV 579
NIV TITA LAACASLNLLHKGKEIHGYMLRNGFED+H+VSSALIDMYSKC+CIDSVI+V
Sbjct: 481 NIVITITAALAACASLNLLHKGKEIHGYMLRNGFEDNHIVSSALIDMYSKCECIDSVIQV 540
Query: 580 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLI 639
FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSD+FSIL PALARTDLI
Sbjct: 541 FGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDSFSILLPALARTDLI 600
Query: 640 MRRQLHSYIIKSQLVGSCDDLANVLSSNEFDGGVLLHG 677
MRRQLHSYIIKSQLV SCDDL+ VLSSNEFDGGV+LHG
Sbjct: 601 MRRQLHSYIIKSQLVESCDDLSYVLSSNEFDGGVMLHG 638
BLAST of Carg09234 vs. NCBI nr
Match:
XP_008445371.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis melo])
HSP 1 Score: 779.6 bits (2012), Expect = 8.4e-222
Identity = 549/677 (81.09%), Postives = 592/677 (87.44%), Query Frame = 0
Query: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
MAT +DGF+SSNN SP LPS K + DLYP+ FSRNSMNVACRMH A+ A NRP C+
Sbjct: 1 MATPLDGFVSSNNASPR-LPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQ 60
Query: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
F+P+A D G NVPI SF LF+ N Q VKLNA RVD+L G L KF K CVD
Sbjct: 61 FSPIAIRTDCE--GVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
D KVFDE+PER LP Y ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPT+LKACS
Sbjct: 121 GDSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACS 180
Query: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
RQ VKTGKM+HGYAIRKR+VSDI IGNALMDFYGNC DL SINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
LVSAY+EEGLL+EAM+ FHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LVSAYIEEGLLNEAMKVFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
XXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPNSVTVAS+LPACAGLR LGLGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRNLGLGR 360
Query: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
AVHAY LKCELCTNIYVEGSLV+MYSKCGQDD+AEE+FAKAEKKN+TLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQG 420
Query: 421 RTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
+ SQALERFRSMQHHGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 KNSQALERFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
XXXXXXXXXXXXXXXXXXXXXXXXT L++K I P+ P+ VTITA LAACASLNLLHKG
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
KEIHGYMLRN FE++H +SSALI+MY+KC+ IDS I+VF IKNRN VCWNALIAG R+
Sbjct: 541 KEIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRI 600
Query: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660
MQ ++AVELFCQMLVEGIKPSS TFSIL PAL+ R DL +RRQLHSYIIKSQ + S +DL
Sbjct: 601 MQHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSNEFDGGVLLHG 677
ANVLSS+ FD GVLLHG
Sbjct: 661 ANVLSSDNFDVGVLLHG 674
BLAST of Carg09234 vs. NCBI nr
Match:
XP_022962292.1 (pentatricopeptide repeat-containing protein At1g19720-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 766.5 bits (1978), Expect = 7.4e-218
Identity = 532/547 (97.26%), Postives = 534/547 (97.62%), Query Frame = 0
Query: 32 SFRFSRNSMNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNRNVQ 91
SFRFSRNSMNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFN NVQ
Sbjct: 55 SFRFSRNSMNVACRMHSTAISAHNRPQCRFAPVAKCPDSNDAGSNVPIARSFALFNCNVQ 114
Query: 92 DVKLNARRVDSLIGNNLAKFCTKCATC---VDSDRKVFDEMPERPLPAYTALIRAYCRSE 151
DVKLNARRVDSLIGNNLAKFC KCA C VDSDRKVFDEMPERPLPAYTALIRAYCRSE
Sbjct: 115 DVKLNARRVDSLIGNNLAKFCAKCAKCATYVDSDRKVFDEMPERPLPAYTALIRAYCRSE 174
Query: 152 KWNELFAAFGSMVEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGN 211
KWNELFAAFGSMVEEGILPDKYLVPTILKACS RQAVKTGKM+HGYAIRKRLVSDIFIGN
Sbjct: 175 KWNELFAAFGSMVEEGILPDKYLVPTILKACSRRQAVKTGKMIHGYAIRKRLVSDIFIGN 234
Query: 212 ALMDFYGNCGDLRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXX 271
ALMDFYGNCGDLRF INVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXX
Sbjct: 235 ALMDFYGNCGDLRFEINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXX 294
Query: 272 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVF 331
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVF
Sbjct: 295 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVF 354
Query: 332 INMLLFPENPNSVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKC 391
INMLLFPENPNSVTVASVLPACAGLRYLGLGRAVHAY LKCELCTNIYVEGSLVNMYSKC
Sbjct: 355 INMLLFPENPNSVTVASVLPACAGLRYLGLGRAVHAYALKCELCTNIYVEGSLVNMYSKC 414
Query: 392 GQDDYAEEIFAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXX 451
GQDDYAEEIFAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXX
Sbjct: 415 GQDDYAEEIFAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXX 474
Query: 452 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACL 511
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACL
Sbjct: 475 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACL 534
Query: 512 VDKVITSPIRPNIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSK 571
VDKVITSPIRPNIVTITA LAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSK
Sbjct: 535 VDKVITSPIRPNIVTITAALAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSK 594
Query: 572 CDCIDSV 576
CD S+
Sbjct: 595 CDGDSSI 601
BLAST of Carg09234 vs. NCBI nr
Match:
XP_004146805.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis sativus] >KGN47749.1 hypothetical protein Csa_6G399730 [Cucumis sativus])
HSP 1 Score: 751.9 bits (1940), Expect = 1.9e-213
Identity = 542/677 (80.06%), Postives = 572/677 (84.49%), Query Frame = 0
Query: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
MAT V GF SSNN S LPS K + DLYP+ FSRNSMNVACRMH A+SAHNRP C+
Sbjct: 1 MATPVYGFASSNNAS-LRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQ 60
Query: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
F+P+A D N G NVPI RSFALF+ + Q VKLN RVD+L G L KF K CVD
Sbjct: 61 FSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
SD KVFDE+PER LPAY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
Query: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
RQ VKTGKM HGYAIRKR+VSDI I NALMDFYGNCGDL SINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
LVSAY+EEGLL+EAME FHSMQSSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
XXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPNSVTVAS+LPACAGLR LGLGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGR 360
Query: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
AVHAY LKCELCTNIYVEGSLV+MYSKCGQDD AEEIFAKAEKKNITLWNEIIATY+NQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQG 420
Query: 421 RTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
+ S ALE FRSMQHHGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 KNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
XXXXXXXXXXXXXXXXXXXXXXXXT L++K I P+ PN VT+TA LAACASLNLLHKG
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
KEIHGY +MY+KC IDS I+VF IKNRN VCWNALIAG R
Sbjct: 541 KEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRT 600
Query: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660
MQ KMAVELFCQMLVEGIKPSS TFSIL PAL+ R DL +RRQLHSYIIKSQ + S +DL
Sbjct: 601 MQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSNEFDGGVLLHG 677
ANVLSS+ D GVLLHG
Sbjct: 661 ANVLSSDNVDVGVLLHG 676
BLAST of Carg09234 vs. TAIR10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 180.3 bits (456), Expect = 4.1e-45
Identity = 251/531 (47.27%), Postives = 326/531 (61.39%), Query Frame = 0
Query: 101 DSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSM 160
D + L KC C+ RKVFD M ER L ++A+I AY R +W E+ F M
Sbjct: 114 DVFVETKLLSMYAKCG-CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 173
Query: 161 VEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDL 220
+++G+LPD +L P IL+ C+ V+ GK++H I+ + S + + N+++ Y CG+L
Sbjct: 174 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 233
Query: 221 RFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXX 280
F+ F M E+DV++W +++ AY + G +EA+E M+ G XXXXXXXXXXX
Sbjct: 234 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGXXXXXXXXXXX 293
Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNS 340
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 294 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
Query: 341 VTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAK 400
AC+ L+ + G VH+ +K ++ V SLV+MYSKCG+ + A ++F
Sbjct: 354 XXXXXXXXACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 413
Query: 401 AEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXX 460
+ K++ WN +I Y G +A E F MQ XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 414 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDXXXXXXXXXXXXXXXXXXXXXXXXXX 473
Query: 461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPN 520
XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + PN
Sbjct: 474 XXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFM---------PN 533
Query: 521 IVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFG 580
VTI ++L ACA+L +EIHG +LR + H V +AL D Y+K I+ +F
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593
Query: 581 GIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPA 632
G++ ++ + WN+LI G+ A+ LF QM +GI P+ T S + A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
BLAST of Carg09234 vs. TAIR10
Match:
AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 172.9 bits (437), Expect = 6.5e-43
Identity = 131/563 (23.27%), Postives = 223/563 (39.61%), Query Frame = 0
Query: 105 GNNLAKFCTKCATC--VDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVE 164
G+ L+ A C + RK+F+EMP+ L +Y +IR Y R +++ + F MV
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 165 EGI--LPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDL 224
EG+ +PD Y P + KA +++K G ++HG +R D ++ NAL+ Y N G +
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 225 RFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXX 284
+ +VFD M +DV+SW ++S Y G +++A+ F M +
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV-------------- 228
Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNS 344
+ +
Sbjct: 229 --------------------------------------------------------DLDH 288
Query: 345 VTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAK 404
T+ S+LP C L+ L +GR VH + L I V+ +LVNMY KCG+ D A +F +
Sbjct: 289 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 348
Query: 405 AEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLR----------XXXXXXXXXXXX 464
E++++ W +I Y G ALE R MQ G+R
Sbjct: 349 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 408
Query: 465 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVD 524
C+ +
Sbjct: 409 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 468
Query: 525 KVIT-----------SPIRPNIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVS 584
++++ + PNI T+ ++L A A+L L + IH Y+ + GF +
Sbjct: 469 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 528
Query: 585 SALIDMYSKCDCIDSVIRVFGGI----KNRNEVCWNALIAGFRRVMQPKMAVELFCQMLV 639
+ L+ +YSKC ++S ++F GI K+++ V W ALI+G+ A+++F +M+
Sbjct: 529 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 541
BLAST of Carg09234 vs. TAIR10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 172.6 bits (436), Expect = 8.5e-43
Identity = 131/539 (24.30%), Postives = 203/539 (37.66%), Query Frame = 0
Query: 100 VDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 159
+D L KC V+ RKVFD MPER L ++ ++ Y ++ S
Sbjct: 168 LDLFAMTGLENMYAKCRQ-VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 227
Query: 160 MVEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGD 219
M EE + P + ++L A S + + GK +HGYA+R S + I AL+D Y CG
Sbjct: 228 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 287
Query: 220 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 279
L + +FD M E++VVSW +++ AY++ EAM F M G
Sbjct: 288 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV------------- 347
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 339
P
Sbjct: 348 ---------------------------------------------------------KPT 407
Query: 340 SVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 399
V+V L ACA L L GR +H +++ L N+ V SL++MY KC + D A +F
Sbjct: 408 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 467
Query: 400 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 459
K + + + WN +I + GR AL F M+
Sbjct: 468 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR-------------------------- 527
Query: 460 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 519
+ ++P
Sbjct: 528 ------------------------------------------------------SRTVKP 555
Query: 520 NIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVF 579
+ T +V+ A A L++ H K IHG ++R+ + + V++AL+DMY+KC I +F
Sbjct: 588 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 555
Query: 580 GGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLI 639
+ R+ WNA+I G+ K A+ELF +M IKP+ TF + A + + L+
Sbjct: 648 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
BLAST of Carg09234 vs. TAIR10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 169.5 bits (428), Expect = 7.2e-42
Identity = 142/588 (24.15%), Postives = 223/588 (37.93%), Query Frame = 0
Query: 100 VDSL-IGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFG 159
VDS+ + N L KC + KVFD + ER ++ +LI + C EKW AF
Sbjct: 130 VDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 189
Query: 160 SMVEEGILPDKYLVPTILKACS---IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYG 219
M++E + P + + +++ ACS + + + GK +H Y +RK ++ FI N L+ YG
Sbjct: 190 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYG 249
Query: 220 NCGDLRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXX 279
G L S + S +D+V+W ++S+ + L EA+E M G
Sbjct: 250 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV--------- 309
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFP 339
Sbjct: 310 ------------------------------------------------------------ 369
Query: 340 ENPNSVTVASVLPACAGLRYLGLGRAVHAYTLK-CELCTNIYVEGSLVNMYSKCGQDDYA 399
P+ T++SVLPAC+ L L G+ +HAY LK L N +V +LV+MY C Q
Sbjct: 370 -EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 429
Query: 400 EEIFAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHH-GL---------------- 459
+F + I LWN +IA Y +AL F M+ GL
Sbjct: 430 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 489
Query: 460 -----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 519
R
Sbjct: 490 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 549
Query: 520 XXXXXXXXXXXXTACLVDKV-----------ITSPIRPNIVTITAVLAACASLNLLHKGK 579
L+ K+ ++PN +T+ +L +CA+L+ L KGK
Sbjct: 550 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 609
Query: 580 EIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRVM 639
EIH Y ++N D V SAL+DMY+KC C+ +VF I +N + WN +I +
Sbjct: 610 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 645
Query: 640 QPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLIMRRQLHSYIIK 650
+ A++L M+V+G+KP+ TF +F A + + ++ Y++K
Sbjct: 670 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
BLAST of Carg09234 vs. TAIR10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 167.9 bits (424), Expect = 2.1e-41
Identity = 130/581 (22.38%), Postives = 228/581 (39.24%), Query Frame = 0
Query: 99 RVDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFG 158
R D ++ + C + D R VFD + + L + A+I +Y R+E ++E+ F
Sbjct: 117 RNDDVLCTRIITMYAMCGS-PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 176
Query: 159 SMVE-EGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNC 218
M+ +LPD + P ++KAC+ V G +HG ++ LV D+F+GNAL+ FYG
Sbjct: 177 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 236
Query: 219 GDLRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXX 278
G + ++ +FD M E+++VSW +++ + + G +E+ M
Sbjct: 237 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM------ 296
Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPEN 338
Sbjct: 297 ------------------------------------------------------------ 356
Query: 339 PNSVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEI 398
P+ T+ +VLP CA R +GLG+ VH + +K L + + +L++MYSKCG A+ I
Sbjct: 357 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 416
Query: 399 FAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHG--------------------- 458
F KN+ WN ++ + +G T + R M G
Sbjct: 417 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 476
Query: 459 ----LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
L+
Sbjct: 477 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 536
Query: 519 XXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKGKEIHGYMLRNGF 578
A L K+ S + P+ T+ ++L+AC+ L L GKE+HG+++RN
Sbjct: 537 GHAQSNDPRLSLDAHLQMKI--SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 596
Query: 579 EDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQ 638
E D V +++ +Y C + +V +F +++++ V WN +I G+ + P A+ +F Q
Sbjct: 597 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 628
Query: 639 MLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQL 653
M++ GI+ + +F A + L + R+ H+Y +K L
Sbjct: 657 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
BLAST of Carg09234 vs. Swiss-Prot
Match:
sp|Q9FXH1|PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 180.3 bits (456), Expect = 7.4e-44
Identity = 251/531 (47.27%), Postives = 326/531 (61.39%), Query Frame = 0
Query: 101 DSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSM 160
D + L KC C+ RKVFD M ER L ++A+I AY R +W E+ F M
Sbjct: 114 DVFVETKLLSMYAKCG-CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 173
Query: 161 VEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDL 220
+++G+LPD +L P IL+ C+ V+ GK++H I+ + S + + N+++ Y CG+L
Sbjct: 174 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGEL 233
Query: 221 RFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXX 280
F+ F M E+DV++W +++ AY + G +EA+E M+ G XXXXXXXXXXX
Sbjct: 234 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGXXXXXXXXXXX 293
Query: 281 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNS 340
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 294 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 353
Query: 341 VTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAK 400
AC+ L+ + G VH+ +K ++ V SLV+MYSKCG+ + A ++F
Sbjct: 354 XXXXXXXXACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDS 413
Query: 401 AEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXX 460
+ K++ WN +I Y G +A E F MQ XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 414 VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDXXXXXXXXXXXXXXXXXXXXXXXXXX 473
Query: 461 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPN 520
XXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + PN
Sbjct: 474 XXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFM---------PN 533
Query: 521 IVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFG 580
VTI ++L ACA+L +EIHG +LR + H V +AL D Y+K I+ +F
Sbjct: 534 SVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFL 593
Query: 581 GIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPA 632
G++ ++ + WN+LI G+ A+ LF QM +GI P+ T S + A
Sbjct: 594 GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILA 634
BLAST of Carg09234 vs. Swiss-Prot
Match:
sp|Q9FLZ9|PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)
HSP 1 Score: 172.9 bits (437), Expect = 1.2e-41
Identity = 131/563 (23.27%), Postives = 223/563 (39.61%), Query Frame = 0
Query: 105 GNNLAKFCTKCATC--VDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVE 164
G+ L+ A C + RK+F+EMP+ L +Y +IR Y R +++ + F MV
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 165 EGI--LPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDL 224
EG+ +PD Y P + KA +++K G ++HG +R D ++ NAL+ Y N G +
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 225 RFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXX 284
+ +VFD M +DV+SW ++S Y G +++A+ F M +
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV-------------- 228
Query: 285 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNS 344
+ +
Sbjct: 229 --------------------------------------------------------DLDH 288
Query: 345 VTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAK 404
T+ S+LP C L+ L +GR VH + L I V+ +LVNMY KCG+ D A +F +
Sbjct: 289 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDR 348
Query: 405 AEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLR----------XXXXXXXXXXXX 464
E++++ W +I Y G ALE R MQ G+R
Sbjct: 349 MERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 408
Query: 465 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVD 524
C+ +
Sbjct: 409 KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQN 468
Query: 525 KVIT-----------SPIRPNIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVS 584
++++ + PNI T+ ++L A A+L L + IH Y+ + GF +
Sbjct: 469 ELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 528
Query: 585 SALIDMYSKCDCIDSVIRVFGGI----KNRNEVCWNALIAGFRRVMQPKMAVELFCQMLV 639
+ L+ +YSKC ++S ++F GI K+++ V W ALI+G+ A+++F +M+
Sbjct: 529 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 541
BLAST of Carg09234 vs. Swiss-Prot
Match:
sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 172.6 bits (436), Expect = 1.5e-41
Identity = 131/539 (24.30%), Postives = 203/539 (37.66%), Query Frame = 0
Query: 100 VDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGS 159
+D L KC V+ RKVFD MPER L ++ ++ Y ++ S
Sbjct: 168 LDLFAMTGLENMYAKCRQ-VNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 227
Query: 160 MVEEGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGD 219
M EE + P + ++L A S + + GK +HGYA+R S + I AL+D Y CG
Sbjct: 228 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 287
Query: 220 LRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXX 279
L + +FD M E++VVSW +++ AY++ EAM F M G
Sbjct: 288 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV------------- 347
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPN 339
P
Sbjct: 348 ---------------------------------------------------------KPT 407
Query: 340 SVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFA 399
V+V L ACA L L GR +H +++ L N+ V SL++MY KC + D A +F
Sbjct: 408 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 467
Query: 400 KAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXX 459
K + + + WN +I + GR AL F M+
Sbjct: 468 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMR-------------------------- 527
Query: 460 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRP 519
+ ++P
Sbjct: 528 ------------------------------------------------------SRTVKP 555
Query: 520 NIVTITAVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVF 579
+ T +V+ A A L++ H K IHG ++R+ + + V++AL+DMY+KC I +F
Sbjct: 588 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 555
Query: 580 GGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLI 639
+ R+ WNA+I G+ K A+ELF +M IKP+ TF + A + + L+
Sbjct: 648 DMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
BLAST of Carg09234 vs. Swiss-Prot
Match:
sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 169.5 bits (428), Expect = 1.3e-40
Identity = 142/588 (24.15%), Postives = 223/588 (37.93%), Query Frame = 0
Query: 100 VDSL-IGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFG 159
VDS+ + N L KC + KVFD + ER ++ +LI + C EKW AF
Sbjct: 130 VDSVTVANTLVNLYRKCGD-FGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 189
Query: 160 SMVEEGILPDKYLVPTILKACS---IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYG 219
M++E + P + + +++ ACS + + + GK +H Y +RK ++ FI N L+ YG
Sbjct: 190 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYG 249
Query: 220 NCGDLRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXX 279
G L S + S +D+V+W ++S+ + L EA+E M G
Sbjct: 250 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV--------- 309
Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFP 339
Sbjct: 310 ------------------------------------------------------------ 369
Query: 340 ENPNSVTVASVLPACAGLRYLGLGRAVHAYTLK-CELCTNIYVEGSLVNMYSKCGQDDYA 399
P+ T++SVLPAC+ L L G+ +HAY LK L N +V +LV+MY C Q
Sbjct: 370 -EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 429
Query: 400 EEIFAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHH-GL---------------- 459
+F + I LWN +IA Y +AL F M+ GL
Sbjct: 430 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 489
Query: 460 -----RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 519
R
Sbjct: 490 SGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTM 549
Query: 520 XXXXXXXXXXXXTACLVDKV-----------ITSPIRPNIVTITAVLAACASLNLLHKGK 579
L+ K+ ++PN +T+ +L +CA+L+ L KGK
Sbjct: 550 ITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGK 609
Query: 580 EIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRVM 639
EIH Y ++N D V SAL+DMY+KC C+ +VF I +N + WN +I +
Sbjct: 610 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 645
Query: 640 QPKMAVELFCQMLVEGIKPSSDTFSILFPALARTDLIMRRQLHSYIIK 650
+ A++L M+V+G+KP+ TF +F A + + ++ Y++K
Sbjct: 670 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
BLAST of Carg09234 vs. Swiss-Prot
Match:
sp|Q0WN60|PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 167.9 bits (424), Expect = 3.8e-40
Identity = 130/581 (22.38%), Postives = 228/581 (39.24%), Query Frame = 0
Query: 99 RVDSLIGNNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFG 158
R D ++ + C + D R VFD + + L + A+I +Y R+E ++E+ F
Sbjct: 117 RNDDVLCTRIITMYAMCGS-PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 176
Query: 159 SMVE-EGILPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNC 218
M+ +LPD + P ++KAC+ V G +HG ++ LV D+F+GNAL+ FYG
Sbjct: 177 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 236
Query: 219 GDLRFSINVFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXX 278
G + ++ +FD M E+++VSW +++ + + G +E+ M
Sbjct: 237 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFM------ 296
Query: 279 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPEN 338
Sbjct: 297 ------------------------------------------------------------ 356
Query: 339 PNSVTVASVLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEI 398
P+ T+ +VLP CA R +GLG+ VH + +K L + + +L++MYSKCG A+ I
Sbjct: 357 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 416
Query: 399 FAKAEKKNITLWNEIIATYVNQGRTSQALERFRSMQHHG--------------------- 458
F KN+ WN ++ + +G T + R M G
Sbjct: 417 FKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHES 476
Query: 459 ----LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
L+
Sbjct: 477 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 536
Query: 519 XXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKGKEIHGYMLRNGF 578
A L K+ S + P+ T+ ++L+AC+ L L GKE+HG+++RN
Sbjct: 537 GHAQSNDPRLSLDAHLQMKI--SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 596
Query: 579 EDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRVMQPKMAVELFCQ 638
E D V +++ +Y C + +V +F +++++ V WN +I G+ + P A+ +F Q
Sbjct: 597 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 628
Query: 639 MLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQL 653
M++ GI+ + +F A + L + R+ H+Y +K L
Sbjct: 657 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLL 628
BLAST of Carg09234 vs. TrEMBL
Match:
tr|A0A1S3BDB0|A0A1S3BDB0_CUCME (pentatricopeptide repeat-containing protein At1g19720-like OS=Cucumis melo OX=3656 GN=LOC103488425 PE=4 SV=1)
HSP 1 Score: 779.6 bits (2012), Expect = 5.6e-222
Identity = 549/677 (81.09%), Postives = 592/677 (87.44%), Query Frame = 0
Query: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
MAT +DGF+SSNN SP LPS K + DLYP+ FSRNSMNVACRMH A+ A NRP C+
Sbjct: 1 MATPLDGFVSSNNASPR-LPSFPKFHFDLYPNSSFSRNSMNVACRMHFNAVWARNRPNCQ 60
Query: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
F+P+A D G NVPI SF LF+ N Q VKLNA RVD+L G L KF K CVD
Sbjct: 61 FSPIAIRTDCE--GVNVPIPGSFVLFDHNSQVVKLNACRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
D KVFDE+PER LP Y ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPT+LKACS
Sbjct: 121 GDSKVFDEIPERTLPTYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTVLKACS 180
Query: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
RQ VKTGKM+HGYAIRKR+VSDI IGNALMDFYGNC DL SINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMVHGYAIRKRMVSDIVIGNALMDFYGNCRDLGSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
LVSAY+EEGLL+EAM+ FHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LVSAYIEEGLLNEAMKVFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
XXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPNSVTVAS+LPACAGLR LGLGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRNLGLGR 360
Query: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
AVHAY LKCELCTNIYVEGSLV+MYSKCGQDD+AEE+FAKAEKKN+TLWNEIIATYVNQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDHAEEVFAKAEKKNVTLWNEIIATYVNQG 420
Query: 421 RTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
+ SQALERFRSMQHHGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 KNSQALERFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
XXXXXXXXXXXXXXXXXXXXXXXXT L++K I P+ P+ VTITA LAACASLNLLHKG
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKAIAFPVIPDTVTITAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
KEIHGYMLRN FE++H +SSALI+MY+KC+ IDS I+VF IKNRN VCWNALIAG R+
Sbjct: 541 KEIHGYMLRNYFENNHFISSALINMYAKCENIDSAIQVFSRIKNRNVVCWNALIAGLLRI 600
Query: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660
MQ ++AVELFCQMLVEGIKPSS TFSIL PAL+ R DL +RRQLHSYIIKSQ + S +DL
Sbjct: 601 MQHEVAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSNEFDGGVLLHG 677
ANVLSS+ FD GVLLHG
Sbjct: 661 ANVLSSDNFDVGVLLHG 674
BLAST of Carg09234 vs. TrEMBL
Match:
tr|A0A0A0KFW8|A0A0A0KFW8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G399730 PE=4 SV=1)
HSP 1 Score: 751.9 bits (1940), Expect = 1.2e-213
Identity = 542/677 (80.06%), Postives = 572/677 (84.49%), Query Frame = 0
Query: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCR 60
MAT V GF SSNN S LPS K + DLYP+ FSRNSMNVACRMH A+SAHNRP C+
Sbjct: 1 MATPVYGFASSNNAS-LRLPSFPKFHFDLYPNSSFSRNSMNVACRMHFHAVSAHNRPNCQ 60
Query: 61 FAPVAKCPDSNDAGSNVPIARSFALFNRNVQDVKLNARRVDSLIGNNLAKFCTKCATCVD 120
F+P+A D N G NVPI RSFALF+ + Q VKLN RVD+L G L KF K CVD
Sbjct: 61 FSPIAIRTDRNCEGVNVPIPRSFALFDHSAQVVKLNDCRVDNLFGKKLTKFYVKDVKCVD 120
Query: 121 SDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGILPDKYLVPTILKACS 180
SD KVFDE+PER LPAY ALIRAYCRSEKWNELFAAF SMV+EGILPDKYLVPTILKACS
Sbjct: 121 SDSKVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACS 180
Query: 181 IRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINVFDSMSEKDVVSWTA 240
RQ VKTGKM HGYAIRKR+VSDI I NALMDFYGNCGDL SINVFDSMSEKDVVSWTA
Sbjct: 181 RRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTA 240
Query: 241 LVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
LVSAY+EEGLL+EAME FHSMQSSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LVSAYIEEGLLNEAMEVFHSMQSSGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVASVLPACAGLRYLGLGR 360
XXXXXXXXXXXXXXXXXXXXXXXXX VFINMLLFPENPNSVTVAS+LPACAGLR LGLGR
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXDVFINMLLFPENPNSVTVASILPACAGLRDLGLGR 360
Query: 361 AVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNITLWNEIIATYVNQG 420
AVHAY LKCELCTNIYVEGSLV+MYSKCGQDD AEEIFAKAEKKNITLWNEIIATY+NQG
Sbjct: 361 AVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMNQG 420
Query: 421 RTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
+ S ALE FRSMQHHGL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 KNSWALEHFRSMQHHGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTITAVLAACASLNLLHKG 540
XXXXXXXXXXXXXXXXXXXXXXXXT L++K I P+ PN VT+TA LAACASLNLLHKG
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXTGSLLNKTIAFPVIPNTVTLTAALAACASLNLLHKG 540
Query: 541 KEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRNEVCWNALIAGFRRV 600
KEIHGY +MY+KC IDS I+VF IKNRN VCWNALIAG R
Sbjct: 541 KEIHGYXXXXXXXXXXXXXXXXXNMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLRT 600
Query: 601 MQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHSYIIKSQLVGSCDDL 660
MQ KMAVELFCQMLVEGIKPSS TFSIL PAL+ R DL +RRQLHSYIIKSQ + S +DL
Sbjct: 601 MQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLESRNDL 660
Query: 661 ANVLSSNEFDGGVLLHG 677
ANVLSS+ D GVLLHG
Sbjct: 661 ANVLSSDNVDVGVLLHG 676
BLAST of Carg09234 vs. TrEMBL
Match:
tr|A0A2P4M1A3|A0A2P4M1A3_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_48169 PE=4 SV=1)
HSP 1 Score: 468.0 bits (1203), Expect = 3.6e-128
Identity = 390/705 (55.32%), Postives = 468/705 (66.38%), Query Frame = 0
Query: 17 ALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCRFAPVAKCPDSN----- 76
+LLPS S P FSR+ H I H+ P + P D N
Sbjct: 7 SLLPSKS------IPDISFSRS--------HKLNIFHHHTPTSKLQPPTATTDLNQRYPQ 66
Query: 77 --------------DAGSNV---PIARSFALFNR---------NVQDVKLNARRVDSLIG 136
++ S + IA +L N + Q +KLNA +SLIG
Sbjct: 67 AHLTSIANRTTNHVNSSSEINGTDIAHCLSLLNTDCLSDIRQVHAQALKLNAFESNSLIG 126
Query: 137 NNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGI 196
N L +K + KVFD++PER + AY ALIRA+CR E+W ELF+ FGSM++EG+
Sbjct: 127 NKLTILYSKNKESLKIALKVFDDIPERTVSAYAALIRAFCRLEQWEELFSVFGSMIDEGM 186
Query: 197 LPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSIN 256
LP+KYLVPTILKACS + ++GKM+HGY IRK L SD+++GNAL+D Y NC DLR S N
Sbjct: 187 LPNKYLVPTILKACSAMEMFRSGKMIHGYVIRKELESDVYVGNALIDLYANCADLRLSRN 246
Query: 257 VFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXX 316
VFDSM E+DVVSWTAL+SA M+EG LDEAME FHSMQ +G XXXXXXXXXXXXXXXXXX
Sbjct: 247 VFDSMKERDVVSWTALISACMDEGYLDEAMEIFHSMQLNGVNXXXXXXXXXXXXXXXXXX 306
Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVAS 376
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F NML FPE+PNS+T+AS
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAFSNMLCFPEDPNSITIAS 366
Query: 377 VLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKN 436
+LPACAGL+ L LGRAVH Y LKCELC N++VEGSL++MY+KCG+ DYAE++F K E KN
Sbjct: 367 ILPACAGLKDLNLGRAVHGYALKCELCRNVHVEGSLIDMYAKCGRIDYAEKVFVKVENKN 426
Query: 437 ITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 496
+WNE+IA Y+N R +ALE R M+ GLR XXXXXXXXXXXX
Sbjct: 427 TAMWNEMIAAYLND-RKMEALELLRLMKKDGLRPDVITYNTLLAGNARXXXXXXXXXXXX 486
Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTIT 556
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C +++V+ + PN VT T
Sbjct: 487 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFQIMQSNGCFLNQVLVA-TSPNAVTTT 546
Query: 557 AVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNR 616
LAACA LNLL +GKEIHGY LRNGFE + VSSALIDMY KC +D +VF ++NR
Sbjct: 547 GALAACADLNLLKQGKEIHGYALRNGFESNIYVSSALIDMYMKCHNMDLATQVFRRLENR 606
Query: 617 NEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTD-LIMRRQLH 676
N +C N LIAG Q + A++LF +ML+EG+KPSS TF IL PA L + R+LH
Sbjct: 607 NTICLNILIAGHVSNAQLEEALQLFNEMLLEGLKPSSITFFILLPACGDMGALRVGRELH 666
BLAST of Carg09234 vs. TrEMBL
Match:
tr|A0A2P4N7Y8|A0A2P4N7Y8_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_74620 PE=4 SV=1)
HSP 1 Score: 465.3 bits (1196), Expect = 2.3e-127
Identity = 401/705 (56.88%), Postives = 479/705 (67.94%), Query Frame = 0
Query: 17 ALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNRPQCRFAPVAKCPDSN----- 76
+LLPS S P FSR+ H I H+ P + P D N
Sbjct: 7 SLLPSKS------IPDISFSRS--------HKLNIFHHHTPTSKLQPPTATTDLNQRYPQ 66
Query: 77 --------------DAGSNV---PIARSFALFNR---------NVQDVKLNARRVDSLIG 136
++ S + IA +L N + Q +KLNA +SLIG
Sbjct: 67 AHLTSIANRTTNHVNSSSEINGTDIAHCLSLLNTDCLSDIRQVHAQALKLNAFESNSLIG 126
Query: 137 NNLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGI 196
N L +K + KVFD++PER + AY ALIRA+CR E+W ELF+ FGSM++EG+
Sbjct: 127 NKLTILYSKNKESLKIALKVFDDIPERTVSAYAALIRAFCRLEQWEELFSVFGSMIDEGM 186
Query: 197 LPDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSIN 256
LP+KYLVPTILKACS + ++GKM+HGY IRK L SD+++GNAL+D Y NC DLR S N
Sbjct: 187 LPNKYLVPTILKACSAMEMFRSGKMIHGYVIRKELESDVYVGNALIDLYANCADLRLSRN 246
Query: 257 VFDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXX 316
VFDSM E+DVVSWTAL+SA M+EG LDEAME FHSMQ +G XXXXXXXXXXXXXXXXXX
Sbjct: 247 VFDSMKERDVVSWTALISACMDEGYLDEAMEIFHSMQLNGVNXXXXXXXXXXXXXXXXXX 306
Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVAS 376
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX F NML FPE+PNSVT+AS
Sbjct: 307 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAFSNMLCFPEDPNSVTIAS 366
Query: 377 VLPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKN 436
+LPACAGL+ L LGRAVH Y LK ELC N++VEGSL++MY+KCG+ DYAE++F K E KN
Sbjct: 367 ILPACAGLKDLNLGRAVHGYALKWELCRNVHVEGSLIDMYAKCGRIDYAEKVFVKVENKN 426
Query: 437 ITLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXX 496
+WNE+IA VN+ + +ALE R M+ GLR XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 427 TAMWNEMIAACVNERKMKEALELLRLMKKDGLRPDVIXXXXXXXXXXXXXXXXXXXXXXX 486
Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTIT 556
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX C +++V+ + PN VT T
Sbjct: 487 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFQIMQSNGCFLNQVLMA-TSPNAVTTT 546
Query: 557 AVLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNR 616
LAACA LNLL +GKEIHGY LRNGFE + VSSALIDMY KC +D +VF ++NR
Sbjct: 547 GALAACADLNLLKQGKEIHGYALRNGFESNIYVSSALIDMYMKCHNMDLATQVFRRLENR 606
Query: 617 NEVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALARTD-LIMRRQLH 676
N +C N LIAG Q + A++LF +ML+EG+KPSS TF IL PA L + R+LH
Sbjct: 607 NTICLNILIAGHVSNAQLEEALQLFNEMLLEGLKPSSITFFILLPACGDMGALRVGRELH 666
BLAST of Carg09234 vs. TrEMBL
Match:
tr|A0A2N9G708|A0A2N9G708_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23200 PE=4 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 1.7e-125
Identity = 393/680 (57.79%), Postives = 478/680 (70.29%), Query Frame = 0
Query: 1 MATLVDGFLSSNNTSPALLPSSSKLNVDLYPSFRFSRNSMNVACRMHSTAISAHNR-PQC 60
MATL + L S L S +LNV + + F + +T ++ R PQ
Sbjct: 1 MATLQNALLPSKPIPDILF--SHRLNVFHHQTPAFKSRAPTATFNGSNTKTDSNQRYPQA 60
Query: 61 RFAPVAKCP----DSNDAGSNVPIARSFALFNRN---------VQDVKLNARRVDSLIGN 120
+A +S+ ++ IA+ +L N N VKLNA + LIGN
Sbjct: 61 HLNSIANRTTNHVNSSSEINDTDIAQCLSLLNTNCLSDCRQVHAHAVKLNAFESNRLIGN 120
Query: 121 NLAKFCTKCATCVDSDRKVFDEMPERPLPAYTALIRAYCRSEKWNELFAAFGSMVEEGIL 180
L +K + RKVFDE+PER +P Y ALIRA+CR E+W++LF+ FGSMV++G+L
Sbjct: 121 KLTILYSKNNESLKIARKVFDEIPERTVPGYVALIRAFCRLEQWDDLFSVFGSMVDDGLL 180
Query: 181 PDKYLVPTILKACSIRQAVKTGKMMHGYAIRKRLVSDIFIGNALMDFYGNCGDLRFSINV 240
P+KYLVPTILKACS Q +++GKM+HGY IRK L DIF+GNAL+D Y NC DLR S +V
Sbjct: 181 PNKYLVPTILKACSAMQILRSGKMIHGYVIRKELDLDIFVGNALIDLYANCADLRLSRSV 240
Query: 241 FDSMSEKDVVSWTALVSAYMEEGLLDEAMEAFHSMQSSGXXXXXXXXXXXXXXXXXXXXX 300
FD+M E+DVVSWTALVSAYM EG LDEAME FHSMQS+G XXXXXXXXXXXXXXXXXXXX
Sbjct: 241 FDTMKERDVVSWTALVSAYMVEGHLDEAMEIFHSMQSNGVXXXXXXXXXXXXXXXXXXXX 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVFINMLLFPENPNSVTVASV 360
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + FP +PN VT+AS+
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVCFPVDPNFVTIASI 360
Query: 361 LPACAGLRYLGLGRAVHAYTLKCELCTNIYVEGSLVNMYSKCGQDDYAEEIFAKAEKKNI 420
LPACAGL+ L LGRAVH Y LK ELC N++VEGSL++MY+KCG+ D A ++F K + KN
Sbjct: 361 LPACAGLKDLNLGRAVHGYALKRELCGNVHVEGSLIDMYAKCGRTDSAVKLFVKVDNKNT 420
Query: 421 TLWNEIIATYVNQGRTSQALERFRSMQHHGLRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
+WNE+IA YVN+ + +AL+ R M+++G R XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 AMWNEMIAAYVNESKMEEALKILRLMKNNGFRPDVITXXXXXXXXXXXXXXXXXXXXXXX 480
Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACLVDKVITSPIRPNIVTITA 540
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++V+ RPN VT T
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWNMQSNGYFLNQVLILSNRPNAVTTTG 540
Query: 541 VLAACASLNLLHKGKEIHGYMLRNGFEDDHVVSSALIDMYSKCDCIDSVIRVFGGIKNRN 600
LAACA LNLL +GKEIHGY LRNGFE + VSSALIDMY KC +D +VF ++NRN
Sbjct: 541 ALAACADLNLLPQGKEIHGYALRNGFESNIFVSSALIDMYVKCHNMDLATQVFRRLENRN 600
Query: 601 EVCWNALIAGFRRVMQPKMAVELFCQMLVEGIKPSSDTFSILFPALA-RTDLIMRRQLHS 660
+CWNALIAG Q + A+ELF +ML+EG++PSS TF L PA + L + R+LH
Sbjct: 601 TICWNALIAGHVSNAQLEEALELFNEMLLEGLQPSSITFLTLLPACGDKGTLRVGRELHG 660
Query: 661 YIIKSQLVGSCDDLANVLSS 666
YIIK+Q DD + L+S
Sbjct: 661 YIIKNQF--DFDDSNSTLAS 676
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023546745.1 | 1.7e-275 | 97.65 | pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita pepo subsp... | [more] |
| XP_022997077.1 | 4.9e-270 | 96.71 | pentatricopeptide repeat-containing protein At1g19720-like [Cucurbita maxima] | [more] |
| XP_008445371.1 | 8.4e-222 | 81.09 | PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis m... | [more] |
| XP_022962292.1 | 7.4e-218 | 97.26 | pentatricopeptide repeat-containing protein At1g19720-like isoform X1 [Cucurbita... | [more] |
| XP_004146805.1 | 1.9e-213 | 80.06 | PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like [Cucumis s... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G19720.1 | 4.1e-45 | 47.27 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT5G39350.1 | 6.5e-43 | 23.27 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G11290.1 | 8.5e-43 | 24.30 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT3G57430.1 | 7.2e-42 | 24.15 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G18485.1 | 2.1e-41 | 22.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
