CsaV3_5G028420 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G028420
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Description10 kDa chaperonin-like
Locationchr5 : 23610918 .. 23612310 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTTACCAAATTGGCCCAATGGGCCTTAATCGCATTCCCGAAAAAACAGCTCTAAAACCCTACAACATCAAAAACTCTAAACCCCCCTGTCCTAGAACCTTCTACGCCTTTCTATTTCTTCCGTTAAAGCAACGCCCACTCTCCATCTTCTTCATTGCGCCTGAACCCAAGAACCCTAATTCTTCCACCACACACTTATGGCGAGGCGCTTAATTCCATCTCTTAATCGTGTCTTGATCGAGAAAATCGTTCCTCCTTCCAAAACCTCTGCTGGCATTCTTCTCCCCGAGAGCTCCTCCAAGGTATCTCCAATGTACCTTTCATTCTCTCTGTTTTTTCATTTCGGTTTCTGTTTCTTCTCTTTGATTTCATTTCTACTGGGGTTTGCACCCTTTAGTTGAACTCCGGCAAGGTGATTGCGGTGGGTCCTGGTGCACGGGATGTTAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTCGGGGAGAAAGAGTATGCTTCTACTTTTCTTGCTCTGTTTGTAGAAACGATGGTCTTTGATTCAAATTTTCCTGCACTGTTTATACCTACTGTATTTGCCTCCTTAGTTCATTGCTATGATCCCAAATTGAACGATTTTATAATTTTAAAACGAGACTGGAAGATTCAGGACTATGTGCGAATTTGAGATATCAATCTTGTTAGAAATTGCTGTTTATCTCTGTCAAATTCATACTAGTCTAAGTAGACTAAAGTTGGATGTAAATATTGATTTCCTATTCGGTTTCATGATTTTGTTTTGATTTTTCTTTGGTGGGGTTTATCTGCAGGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTTTACATGATGATTGATTATCAATCTAATTCAACAGTGGACTGCTTGTGCTTTTTGCTAGAGCTTCATTCTGGTATATTTGAATTTAGTTTTCTTTCATGTTGTAGCTTATTGAATGCTAGAACCAGAATGAAGGACATGATCAATTAATGATTGGTTTTCCATTTGGTTAAATCTTATTGGAAACTATTTTCAGTTCCTCATCGTCACTTTTATCTTTAATCTCTATTCAGCATTTCTTTTCTTGATGGTCTGGAGGAGTGGAAACTACTGTAGTCTTCGAGTTTTGGGTCTATCGGAAGATTTTAAATCGTAACAGTGTATTTTCCCAGTTCTTAGTTTCGAAATTTCAAATATTAAATTTACATTTTTACTACAATTTTTGTAATACTAAATATTCATTTTTATTCGATGTTCTCTTAATGTCTATTAATTCATTTAAAATAATTATGTGAGTAAAATTTTGGAAACCAGTTTCAACGGTGATAAAAAAAATAATTTTT

mRNA sequence

ATGGCGAGGCGCTTAATTCCATCTCTTAATCGTGTCTTGATCGAGAAAATCGTTCCTCCTTCCAAAACCTCTGCTGGCATTCTTCTCCCCGAGAGCTCCTCCAAGTTGAACTCCGGCAAGGTGATTGCGGTGGGTCCTGGTGCACGGGATGTTAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTCGGGGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTTTACATGATGATTGA

Coding sequence (CDS)

ATGGCGAGGCGCTTAATTCCATCTCTTAATCGTGTCTTGATCGAGAAAATCGTTCCTCCTTCCAAAACCTCTGCTGGCATTCTTCTCCCCGAGAGCTCCTCCAAGTTGAACTCCGGCAAGGTGATTGCGGTGGGTCCTGGTGCACGGGATGTTAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTCGGGGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTTTACATGATGATTGA

Protein sequence

MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCVKEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD
Homology
[Close]
BLAST of CsaV3_5G028420 vs. NCBI nr
Match: XP_004150598.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-46
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV
Sbjct: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD 99
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD 98

[Close]
BLAST of CsaV3_5G028420 vs. NCBI nr
Match: XP_008467132.1 (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 187.6 bits (475), Expect = 2.1e-44
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARD++GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH 96

[Close]
BLAST of CsaV3_5G028420 vs. NCBI nr
Match: XP_022990905.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-41
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD SGNL+PV V
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. NCBI nr
Match: XP_022152333.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia])

HSP 1 Score: 176.8 bits (447), Expect = 3.7e-41
Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP LNRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD SGNLVPV V
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRSGNLVPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLP+YGGT VKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPDYGGTPVKLGEKEFHLFRDEDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. NCBI nr
Match: XP_023550871.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.8 bits (447), Expect = 3.7e-41
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD +GNL+PV V
Sbjct: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. TAIR10
Match: AT1G14980.1 (chaperonin 10)

HSP 1 Score: 158.3 bits (399), Expect = 2.4e-39
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          M +RLIP+ NR+L+++++ P+KT +GILLPE SSKLNSGKVIAVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD 99
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+D
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHED 98

[Close]
BLAST of CsaV3_5G028420 vs. TAIR10
Match: AT1G23100.1 (GroES-like family protein)

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-39
Identity = 76/97 (78.35%), Postives = 89/97 (91.75%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP+LNRVL+EKI+PPSKT +GILLPE SS+LNSG+VIAVGPGARD +GNL+PV V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGD VLLPE+GGT VKLGEKEF L+RDEDI+ TLH+
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLHE 97

[Close]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match: sp|P34893|CH10_ARATH (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 4.4e-38
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          M +RLIP+ NR+L+++++ P+KT +GILLPE SSKLNSGKVIAVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD 99
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH+D
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHED 98

[Close]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match: sp|Q96539|CH10_BRANA (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 7.5e-38
Identity = 72/98 (73.47%), Postives = 87/98 (88.78%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          M +RLIP+ NR+L++ ++ P+KT +GILLPE +SKLNSGKVIAVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHDD 99
          KEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTLH+D
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHED 98

[Close]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match: sp|Q64433|CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 3.0e-18
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0 

Query: 3   RRLIPSLNRVLIEKIVPPSKTSAGILLPE-SSSKLNSGKVIAVGPGARDVSGNLVPVCVK 62
           R+ +P  +RVL+E+    + T  GI+LPE S  K+    V+AVG G +  SG + PV VK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63  EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
            GD VLLPEYGGT V L +K++ LFRD DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102

[Close]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match: sp|Q9W6X3|CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-18
Identity = 45/96 (46.88%), Postives = 65/96 (67.71%), Query Frame = 0 

Query: 3  RRLIPSLNRVLIEKIVPPSKTSAGILLPE-SSSKLNSGKVIAVGPGARDVSGNLVPVCVK 62
          R+ +P  +RVL+E+++  + T  GI+LPE S  K+    V+AVGPG+ +  G + P+ VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
           G+ VLLP+YGGT V L +K++ LFRD DILG   D
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKYVD 99

[Close]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match: sp|P61603|CH10_BOVIN (10 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17
Identity = 47/96 (48.96%), Postives = 62/96 (64.58%), Query Frame = 0 

Query: 3   RRLIPSLNRVLIEKIVPPSKTSAGILLPE-SSSKLNSGKVIAVGPGARDVSGNLVPVCVK 62
           R+ +P  +RVL+E+    + T  GI+LPE S  K+    V+AVG G++   G + PV VK
Sbjct: 7   RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63  EGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
            GD VLLPEYGGT V L +K++ LFRD DILG   D
Sbjct: 67  VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102

[Close]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match: tr|A0A1S3CU36|A0A1S3CU36_CUCME (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103504560 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.4e-44
Identity = 93/96 (96.88%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARD++GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH 96

[Close]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match: tr|A0A251U2Z0|A0A251U2Z0_HELAN (Putative groES-like family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0212111 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.6e-40
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP LNRVL+EKIVPPSKT+AGILLPE SSKLNSGKVIAVGPGARD SGN +PV V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVIAVGPGARDNSGNTIPVGV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEYHLFRDEDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match: tr|A0A2P6R3B5|A0A2P6R3B5_ROSCH (Putative groES chaperonin family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0441491 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.6e-40
Identity = 82/97 (84.54%), Postives = 92/97 (94.85%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP+LNRVLIEKI+PPSKT+AGILLPESS+KLNSGKV+AVGPG +D +GN +PV V
Sbjct: 1  MAKRLIPTLNRVLIEKIIPPSKTTAGILLPESSAKLNSGKVVAVGPGTKDKAGNAIPVAV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLG+KEFHLFRDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGDKEFHLFRDEDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match: tr|A0A175YGB8|A0A175YGB8_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_030228 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.0e-40
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIP+LNRVLIEKIVPPSKT+AGILLPE SSKLNSGKV+AVGPGA D SGN +PV V
Sbjct: 1  MAKRLIPTLNRVLIEKIVPPSKTTAGILLPEKSSKLNSGKVVAVGPGALDKSGNKIPVAV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HLFRD+DILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDDDILGTLHD 97

[Close]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match: tr|A0A251T1C9|A0A251T1C9_HELAN (Putative 10 kDa chaperonin OS=Helianthus annuus OX=4232 GN=CH10 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.8e-40
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 0 

Query: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60
          MA+RLIPSLNRVL+EKI+PPSKT+AGILLPE SSKLNSGKV+AVGPG  D+SGN +PV V
Sbjct: 1  MAKRLIPSLNRVLVEKIIPPSKTTAGILLPEKSSKLNSGKVVAVGPGTHDLSGNKIPVGV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHD 98
          KEGDTVLLPEYGGT VKLGEKE+HL+RDEDILGTLHD
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEYHLYRDEDILGTLHD 97

The following BLAST results are available for this feature:
BLAST of CsaV3_5G028420 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150598.11.7e-46100.00PREDICTED: 10 kDa chaperonin-like [Cucumis sativus][more]
XP_008467132.12.1e-4496.88PREDICTED: 10 kDa chaperonin-like [Cucumis melo][more]
XP_022990905.11.6e-4190.7210 kDa chaperonin, mitochondrial-like [Cucurbita maxima][more]
XP_022152333.13.7e-4190.7210 kDa chaperonin, mitochondrial-like [Momordica charantia][more]
XP_023550871.13.7e-4189.6910 kDa chaperonin, mitochondrial-like [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_5G028420 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14980.12.4e-3973.47chaperonin 10[more]
AT1G23100.13.2e-3978.35GroES-like family protein[more]
BLAST of CsaV3_5G028420 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P34893|CH10_ARATH4.4e-3873.4710 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 S... [more]
sp|Q96539|CH10_BRANA7.5e-3873.4710 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1[more]
sp|Q64433|CH10_MOUSE3.0e-1850.0010 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 ... [more]
sp|Q9W6X3|CH10_ORYLA8.6e-1846.8810 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=... [more]
sp|P61603|CH10_BOVIN1.1e-1748.9610 kDa heat shock protein, mitochondrial OS=Bos taurus OX=9913 GN=HSPE1 PE=3 SV=... [more]
BLAST of CsaV3_5G028420 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CU36|A0A1S3CU36_CUCME1.4e-4496.8810 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103504560 PE=3 SV=1[more]
tr|A0A251U2Z0|A0A251U2Z0_HELAN1.6e-4088.66Putative groES-like family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08... [more]
tr|A0A2P6R3B5|A0A2P6R3B5_ROSCH4.6e-4084.54Putative groES chaperonin family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g044... [more]
tr|A0A175YGB8|A0A175YGB8_DAUCA6.0e-4086.60Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_030228 ... [more]
tr|A0A251T1C9|A0A251T1C9_HELAN7.8e-4084.54Putative 10 kDa chaperonin OS=Helianthus annuus OX=4232 GN=CH10 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR011032GroES-like_sf
IPR037124Chaperonin_GroES_sf
IPR020818Chaperonin_GroES
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0005507 copper ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G028420.1CsaV3_5G028420.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 61..73
score: 52.0
coord: 82..95
score: 31.55
coord: 5..20
score: 26.17
coord: 26..47
score: 39.3
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 4..95
e-value: 1.3E-31
score: 121.0
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 6..94
e-value: 5.5E-24
score: 83.9
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..98
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 4..95
e-value: 6.00827E-33
score: 110.675
IPR037124GroES chaperonin superfamilyGENE3DG3DSA:2.30.33.40coord: 1..98
e-value: 2.8E-32
score: 112.7
NoneNo IPR availablePANTHERPTHR10772:SF2510 KDA CHAPERONINcoord: 1..98
IPR011032GroES-like superfamilySUPERFAMILYSSF50129GroES-likecoord: 4..95

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G028420CSPI05G19570Wild cucumber (PI 183967)cpicucB284
CsaV3_5G028420Cucsa.280360Cucumber (Gy14) v1cgycucB428
CsaV3_5G028420CmaCh04G021300Cucurbita maxima (Rimu)cmacucB0869
CsaV3_5G028420Cp4.1LG01g18500Cucurbita pepo (Zucchini)cpecucB0526
CsaV3_5G028420CsGy5G019080Cucumber (Gy14) v2cgybcucB232
CsaV3_5G028420Carg25243Silver-seed gourdcarcucB0917
CsaV3_5G028420Cla003925Watermelon (97103) v1cucwmB441
CsaV3_5G028420MELO3C005305Melon (DHL92) v3.5.1cucmeB350
CsaV3_5G028420ClCG01G006240Watermelon (Charleston Gray)cucwcgB394
CsaV3_5G028420Lsi09G006590Bottle gourd (USVL1VR-Ls)cuclsiB352
CsaV3_5G028420MELO3C005305.2Melon (DHL92) v3.6.1cucmedB342
CsaV3_5G028420Cla97C01G006550Watermelon (97103) v2cucwmbB359
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G028420Silver-seed gourdcarcucB0217
CsaV3_5G028420Silver-seed gourdcarcucB0461
CsaV3_5G028420Cucurbita maxima (Rimu)cmacucB0355
CsaV3_5G028420Cucurbita maxima (Rimu)cmacucB0888
CsaV3_5G028420Cucurbita moschata (Rifu)cmocucB0350
CsaV3_5G028420Cucurbita moschata (Rifu)cmocucB0878
CsaV3_5G028420Cucurbita pepo (Zucchini)cpecucB0212
CsaV3_5G028420Cucurbita pepo (Zucchini)cpecucB0547
CsaV3_5G028420Wild cucumber (PI 183967)cpicucB294
CsaV3_5G028420Melon (DHL92) v3.5.1cucmeB355
CsaV3_5G028420Melon (DHL92) v3.5.1cucmeB363
CsaV3_5G028420Melon (DHL92) v3.6.1cucmedB356
CsaV3_5G028420Wax gourdcucwgoB461