Cp4.1LG01g18500 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g18500
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description10 kDa chaperonin
LocationCp4.1LG01 : 15762963 .. 15764382 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAACATCAAAGCACTTAAACCCTAACGCGTAGAACCTTCTAGGCGCATCCAGAACCCCAAATTTGCACGCCCTTTCGTCCAATAGCGCCACATAAAAAGCACCTCTTCTCGTCGCCTTCCTACTCCAAAACCCTAATTCTTCGACCACAGACGTTGCACGAACAATCAACTCAAAGACGAATGGCGAAGCGATTAATTCCTTTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGGTATTTGCAATGTAGCATTCGTTTTATCTGTAGTTTCATTTCAATTTTCCTTGTCCTTACTTGATTTGGTTTTTTATGTGATTAACCGATGTTTGCTCCGACAGTTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAACGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAGTATGATTTTAAACAGTTTTAACTAGTTTTATTTCTTTGTTTGCAGAAATGGTCGTCTGCGATATAATTCGTCCTGCACTTTTTATTATGCTTGTTTTGTTTGCATCTTTAATTCACTAACGTGAACTCATGAATAATGCTTGTATGTCTCTGAGGCCCCATCTCCGATTCTAAATGAATTTGAATTCTAGTTAAACTAATTAATAAAAAAGTTGAAGAGCTAAATTTGTTTTCTACAGAGTTATGGGATAGAACTTTACTTGTTGTGTTAAAACTAAGTATTTGAAAGTCCAAGAGAGAAAACATAAAGCTGAATCAACTAAAATTTTCAGGAAGATTTAGGGCGAAGAGTGAATTTAAGATGATTTGTAGAAAGATTTAAAGCTAGTGTATTAACTCTTTAAATTTGATTAGATAATGAACAAGTGTTGTAGAAACTTTCATAGCATAAAAACACTTAAAAAAGTACTTTCGAGAGAAGAACTAAATTGCTGTTTCAGTGTTTCTTCCCGAAACTGAATGTTCCTCGAAATTATGTCAAACCAAGACTAAAAGAAAAGGATTAAAATAACATTTTTGAATCCATTTTCATGATTTTAGTTTGAATTGTTTGATTGGGGTTTATCTGCAGGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGATAGATTCATCCGACTCCATGGTGTGGTCGGATTGCGCTTTTTGCAAGAGGAGCTCATTCTGGTACTCTGAGTTGATTCTCTTCTCTTCCATGTTGTAGCTTCTTATTCACTGCAATAATGAAGGATGCCATCATTTTATGGTTAGTTTTCCATTTGGATAAATCTTAATGGAAACTCTTTTCAGTTCATCGTTGCTTCTGTTGTGATT

mRNA sequence

CAAGAACATCAAAGCACTTAAACCCTAACGCGTAGAACCTTCTAGGCGCATCCAGAACCCCAAATTTGCACGCCCTTTCGTCCAATAGCGCCACATAAAAAGCACCTCTTCTCGTCGCCTTCCTACTCCAAAACCCTAATTCTTCGACCACAGACGTTGCACGAACAATCAACTCAAAGACGAATGGCGAAGCGATTAATTCCTTTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAACGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAAACTTTACTTGTTGTGTTAAAACTAAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGATAGATTCATCCGACTCCATGGTGTGGTCGGATTGCGCTTTTTGCAAGAGGAGCTCATTCTGGTACTCTGAGTTGATTCTCTTCTCTTCCATGTTGTAGCTTCTTATTCACTGCAATAATGAAGGATGCCATCATTTTATGGTTAGTTTTCCATTTGGATAAATCTTAATGGAAACTCTTTTCAGTTCATCGTTGCTTCTGTTGTGATT

Coding sequence (CDS)

ATGGCGAAGCGATTAATTCCTTTCTTCAATCGTGTCCTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCAGAGAGCTCCACCAAGTTGAACTCCGGTAAGGTGGTTGCAGTGGGTCCTGGTGCACGGGATAGAAACGGGAATCTGATTCCGGTCAGTGTGAAAGAAGGTGATACCGTTCTTTTGCCTGAATATGGAGGCACGTCGGTGAAGCTTGGAGAGAAAGAAACTTTACTTGTTGTGTTAAAACTAAGTTCCATTTGTTTAGAGATGAAGACATTTTGGGAACTCTACATGATTGATAGATTCATCCGACTCCATGGTGTGGTCGGATTGCGCTTTTTGCAAGAGGAGCTCATTCTGGTACTCTGA

Protein sequence

MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVKEGDTVLLPEYGGTSVKLGEKETLLVVLKLSSICLEMKTFWELYMIDRFIRLHGVVGLRFLQEELILVL
Homology
[Close]
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.7e-30
Identity = 61/82 (74.39%), Postives = 74/82 (90.24%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD++G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGE E
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 9.6e-30
Identity = 61/82 (74.39%), Postives = 74/82 (90.24%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          M KRLIP FNR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD++G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match: CH10_YEAST (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSP10 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 39/86 (45.35%), Postives = 61/86 (70.93%), Query Frame = 1 

Query: 2  AKRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSV 61
          AK ++P  +RVL+++I   +KT +G+ LPE +  KLN  +VVAVGPG  D NGN +   V
Sbjct: 8  AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQV 67

Query: 62 KEGDTVLLPEYGGTSVKLGEKETLLV 87
          K GD VL+P++GG+++KLG  + +++
Sbjct: 68 KVGDQVLIPQFGGSTIKLGNDDEVIL 93

[Close]
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 1 

Query: 2  AKRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSV 61
          AK ++P  +R+L+++I   +KT +GI LPE S  KL+ G+V++VG G  ++ G L   SV
Sbjct: 8  AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSV 67

Query: 62 KEGDTVLLPEYGGTSVKLGEKE 83
            GD VLLP YGG+++K+GE+E
Sbjct: 68 AVGDRVLLPAYGGSNIKVGEEE 89

[Close]
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match: CH10_HUMAN (10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-14
Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 1 

Query: 3  KRLIPFFNRVLIEKIVPPSKTTAGILLPESST-KLNSGKVVAVGPGARDRNGNLIPVSVK 62
          ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++ + G + PVSVK
Sbjct: 7  RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63 EGDTVLLPEYGGTSVKLGEKETLL 86
           GD VLLPEYGGT V L +K+  L
Sbjct: 67 VGDKVLLPEYGGTKVVLDDKDYFL 90

[Close]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match: A0A0A0KPH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570400 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-36
Identity = 90/142 (63.38%), Postives = 101/142 (71.13%), Query Frame = 1 

Query: 1   MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
           MA+RLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD +GNL+PV V
Sbjct: 1   MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61  KEGDTVLLPEYGGTSVKLGEKE-------------------------TLLVVLK------ 107
           KEGDTVLLPEYGGTSVKLGEKE                         T+ ++L+      
Sbjct: 61  KEGDTVLLPEYGGTSVKLGEKEYASTFLALFVETMVFDSNFPALFIPTISILLEIAVYLC 120

[Close]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match: M0TSH4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.8e-33
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP FNRVL+EKIVPPSKT+AGILLPE +TKLNSGKVVAVGPGARDR+G LIPVSV
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match: M5XHL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013898mg PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.4e-32
Identity = 71/82 (86.59%), Postives = 78/82 (95.12%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MA+RLIP  NRVLIEKI+PPSKTTAGILLPESSTKLNSGKVVAVGPGA+D+ GN+IPV+V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNVIPVAV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLG+KE
Sbjct: 61 KEGDTVLLPEYGGTQVKLGDKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match: W1NUY2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00101p00144290 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.4e-32
Identity = 72/85 (84.71%), Postives = 77/85 (90.59%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP  NRVLIEKIVPP+KT+AGILLPE +TKLNSGKVVAVGPG RDR GN +PVS+
Sbjct: 1  MAKRLIPLLNRVLIEKIVPPTKTSAGILLPEKTTKLNSGKVVAVGPGLRDREGNTVPVSL 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKETLL 86
          KEGDTVLLPEYGGT VKLGEKE LL
Sbjct: 61 KEGDTVLLPEYGGTDVKLGEKEYLL 85

[Close]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match: A0A059D6K0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02909 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-31
Identity = 70/82 (85.37%), Postives = 75/82 (91.46%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRL+P  NRVL+EKIVPPSKTTAGILLPE S KLNSGKVVAVGPGARD +GN +PVSV
Sbjct: 1  MAKRLVPLLNRVLVEKIVPPSKTTAGILLPEKSAKLNSGKVVAVGPGARDAHGNAVPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEK+
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKD 82

[Close]
BLAST of Cp4.1LG01g18500 vs. TAIR10
Match: AT1G23100.1 (AT1G23100.1 GroES-like family protein)

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-33
Identity = 69/85 (81.18%), Postives = 77/85 (90.59%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP  NRVL+EKI+PPSKT +GILLPE S++LNSG+V+AVGPGARDR GNLIPVSV
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKETLL 86
          KEGD VLLPE+GGT VKLGEKE LL
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLL 85

[Close]
BLAST of Cp4.1LG01g18500 vs. TAIR10
Match: AT1G14980.1 (AT1G14980.1 chaperonin 10)

HSP 1 Score: 131.7 bits (330), Expect = 3.2e-31
Identity = 61/82 (74.39%), Postives = 74/82 (90.24%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          M KRLIP FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD++G LIPVSV
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGE E
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. TAIR10
Match: AT5G20720.1 (AT5G20720.1 chaperonin 20)

HSP 1 Score: 55.1 bits (131), Expect = 3.8e-08
Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 1 

Query: 3   KRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNS-GKVVAVGPGARDRNGNLIPVSVK 62
           K L P  +RV I+      KT  G+LL E++ +  S G V+AVGPG+ D  G + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTSVKLGEKETLLVVLKLSSI 94
            G TVL  +Y G   K G+  +  + L+ S +
Sbjct: 218 TGSTVLYSKYAGNDFK-GKDGSNYIALRASDV 248

[Close]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match: gi|700196318|gb|KGN51495.1| (hypothetical protein Csa_5G570400 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 5.3e-36
Identity = 90/142 (63.38%), Postives = 101/142 (71.13%), Query Frame = 1 

Query: 1   MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
           MA+RLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD +GNL+PV V
Sbjct: 1   MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61  KEGDTVLLPEYGGTSVKLGEKE-------------------------TLLVVLK------ 107
           KEGDTVLLPEYGGTSVKLGEKE                         T+ ++L+      
Sbjct: 61  KEGDTVLLPEYGGTSVKLGEKEYASTFLALFVETMVFDSNFPALFIPTISILLEIAVYLC 120

[Close]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match: gi|695052315|ref|XP_009414211.1| (PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 149.1 bits (375), Expect = 5.5e-33
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP FNRVL+EKIVPPSKT+AGILLPE +TKLNSGKVVAVGPGARDR+G LIPVSV
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGT VKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match: gi|659072860|ref|XP_008467132.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-32
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP  NRVLIEKIVPPSKT+AGILLPESS+KLNSGKV+AVGPGARD NGNL+PV V
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGDTVLLPEYGGTSVKLGEKE
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match: gi|743785971|ref|XP_010922051.1| (PREDICTED: 10 kDa chaperonin-like [Elaeis guineensis])

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-32
Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MAKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSV 60
          MAKRLIP  NRVL+EKIVPPSKT AGILLPE +TKLNSGKVVAVGPGARDRNGNLIPVSV
Sbjct: 1  MAKRLIPSINRVLVEKIVPPSKTNAGILLPEKTTKLNSGKVVAVGPGARDRNGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTSVKLGEKE 83
          KEGD VLLPEYGGT VKLG+KE
Sbjct: 61 KEGDVVLLPEYGGTEVKLGDKE 82

[Close]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match: gi|1009154963|ref|XP_015895458.1| (PREDICTED: 10 kDa chaperonin-like [Ziziphus jujuba])

HSP 1 Score: 145.6 bits (366), Expect = 6.0e-32
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = 1 

Query: 2  AKRLIPFFNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGARDRNGNLIPVSVK 61
          AKRLIP  NR+LIEKIVPPSKTTAG+LLPESSTKLNSGKVVAVGPGARD++GN+IPV VK
Sbjct: 3  AKRLIPTLNRILIEKIVPPSKTTAGVLLPESSTKLNSGKVVAVGPGARDKSGNVIPVCVK 62

Query: 62 EGDTVLLPEYGGTSVKLGEKETLL 86
          EGDTVLLPEYGGT VKLG+KE +L
Sbjct: 63 EGDTVLLPEYGGTQVKLGDKEYVL 86

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g18500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CH10_ARATH5.7e-3074.3910 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1[more]
CH10_BRANA9.6e-3074.3910 kDa chaperonin OS=Brassica napus PE=3 SV=1[more]
CH10_YEAST1.8e-1545.3510 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae (strain ATC... [more]
CH10_SCHPO1.1e-1446.3410 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 97... [more]
CH10_HUMAN4.3e-1448.8110 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2[more]
BLAST of Cp4.1LG01g18500 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPH4_CUCSA3.7e-3663.38Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570400 PE=3 SV=1[more]
M0TSH4_MUSAM3.8e-3390.24Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1[more]
M5XHL1_PRUPE9.4e-3286.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013898mg PE=3 SV=1[more]
W1NUY2_AMBTC9.4e-3284.71Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00101p00144290 PE=3 SV=... [more]
A0A059D6K0_EUCGR1.6e-3185.37Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02909 PE=3 SV=1[more]
BLAST of Cp4.1LG01g18500 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G23100.11.5e-3381.18 GroES-like family protein[more]
AT1G14980.13.2e-3174.39 chaperonin 10[more]
AT5G20720.13.8e-0836.96 chaperonin 20[more]
BLAST of Cp4.1LG01g18500 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700196318|gb|KGN51495.1|5.3e-3663.38hypothetical protein Csa_5G570400 [Cucumis sativus][more]
gi|695052315|ref|XP_009414211.1|5.5e-3390.24PREDICTED: 10 kDa chaperonin-like [Musa acuminata subsp. malaccensis][more]
gi|659072860|ref|XP_008467132.1|1.6e-3290.24PREDICTED: 10 kDa chaperonin-like [Cucumis melo][more]
gi|743785971|ref|XP_010922051.1|2.7e-3289.02PREDICTED: 10 kDa chaperonin-like [Elaeis guineensis][more]
gi|1009154963|ref|XP_015895458.1|6.0e-3285.71PREDICTED: 10 kDa chaperonin-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR011032GroES-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0005507 copper ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18500.1Cp4.1LG01g18500.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011032GroES-likeunknownSSF50129GroES-likecoord: 4..86
score: 3.3
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 26..47
score: 6.9E-11coord: 5..20
score: 6.9E-11coord: 61..73
score: 6.9
IPR020818GroES chaperonin familyGENE3DG3DSA:2.30.33.40coord: 3..86
score: 8.7
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..85
score: 2.6
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 5..89
score: 7.5
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 4..97
score: 1.0
NoneNo IPR availablePANTHERPTHR10772:SF9GROES-LIKE PROTEINcoord: 1..85
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g18500Cucsa.280360Cucumber (Gy14) v1cgycpeB0737
Cp4.1LG01g18500CmaCh04G021300Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g18500Cla003925Watermelon (97103) v1cpewmB442
Cp4.1LG01g18500Csa5G570400Cucumber (Chinese Long) v2cpecuB424
Cp4.1LG01g18500MELO3C005305Melon (DHL92) v3.5.1cpemeB347
Cp4.1LG01g18500ClCG01G006240Watermelon (Charleston Gray)cpewcgB373
Cp4.1LG01g18500CSPI05G19570Wild cucumber (PI 183967)cpecpiB422
Cp4.1LG01g18500Lsi09G006590Bottle gourd (USVL1VR-Ls)cpelsiB315
Cp4.1LG01g18500MELO3C005305.2Melon (DHL92) v3.6.1cpemedB407
Cp4.1LG01g18500CsaV3_5G028420Cucumber (Chinese Long) v3cpecucB0526
Cp4.1LG01g18500Bhi12G000768Wax gourdcpewgoB0494
Cp4.1LG01g18500CsGy5G019080Cucumber (Gy14) v2cgybcpeB634
Cp4.1LG01g18500Carg25243Silver-seed gourdcarcpeB1228
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g18500Cucumber (Gy14) v1cgycpeB0523
Cp4.1LG01g18500Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g18500Wild cucumber (PI 183967)cpecpiB444
Cp4.1LG01g18500Wild cucumber (PI 183967)cpecpiB454
Cp4.1LG01g18500Cucumber (Chinese Long) v2cpecuB443
Cp4.1LG01g18500Cucumber (Chinese Long) v2cpecuB455
Cp4.1LG01g18500Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g18500Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g18500Watermelon (97103) v1cpewmB440
Cp4.1LG01g18500Melon (DHL92) v3.5.1cpemeB353
Cp4.1LG01g18500Cucumber (Gy14) v2cgybcpeB651
Cp4.1LG01g18500Melon (DHL92) v3.6.1cpemedB412
Cp4.1LG01g18500Cucumber (Chinese Long) v3cpecucB0547
Cp4.1LG01g18500Wax gourdcpewgoB0491