ClCG01G006240 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G006240
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Description10 kDa chaperonin family protein
LocationCG_Chr01 : 6938378 .. 6939569 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAACCTTCTACTCCCATCCAGAAACCCAAATTTGCACTTCTTTTTCTTTTCCATTAAAGCAAACACCACTCTCCATCCTCTTCCTCGCACCTGAACTCAAGAGCCCTAATTCTTCGAGCACGGACGTATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGGTATCTCCAATGTACCATTCATTCTCTCTGTTATTCCATTTCTTAGCTTCGATTTGATTTCTATTGGGCTTTGCTCCCTTAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGTATGCTTCCAGACAGTATTAGTTTCTTTTCTTGCTCTGTTTGCAGAAATGATCGTCTTTGATTCAAATCTTCCTGCACTTTTTATGCTTATTGTATTTGCATCATTGTCTCTTTATCTTTATTGATTTAAAACAATTGAGGACCAAAATTAATTTGGGCTATAACTGATTATTTGGAACTCCGCAGAGAAAAACAAAGTTCTGGAATCAAATTGAATATTTTGAAAAATTTAAAACGAGATTGGAAGATTCAGGACTAGGCGTAGATTTGAGATAATGATTTTAGAAATTGCTGTTTCTTCCCAAAACTTTCACTGAATCTTTCTCAAATTCATATTAGACTAAGAGTAGGATGCAAATATTAATTTCCTATTTGTTTTCATGATTTTGGTATGAGTTTCTTTTGTGGGGTTTATCTGCAGGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGATGGATTGACCGTTCTGATTCAACAGTGATCTAATTGTGCTTTTGCAAGAGCTCCATTCTGGTACTTTTGAGTTAGTTTTCTTTCATGTTGTAGCTTCTTGTTGAATGTTAGAATGAAGGATATGATCAATTCATGGTTGGTTTTCCATTTCGATAAATCTTAATGGAAACTATTTTTCAGTTCCTCATTGTCATTTCTATGCCTAATCTTTATTCAGCATTTTTCTTGATGGTTGGGAGGAATGGAGAACTATTGTAGTTGATGGC

mRNA sequence

AGAACCTTCTACTCCCATCCAGAAACCCAAATTTGCACTTCTTTTTCTTTTCCATTAAAGCAAACACCACTCTCCATCCTCTTCCTCGCACCTGAACTCAAGAGCCCTAATTCTTCGAGCACGGACGTATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGATGGATTGACCGTTCTGATTCAACAGTGATCTAATTGTGCTTTTGCAAGAGCTCCATTCTGGTACTTTTGAGTTAGTTTTCTTTCATGTTGTAGCTTCTTGTTGAATGTTAGAATGAAGGATATGATCAATTCATGGTTGGTTTTCCATTTCGATAAATCTTAATGGAAACTATTTTTCAGTTCCTCATTGTCATTTCTATGCCTAATCTTTATTCAGCATTTTTCTTGATGGTTGGGAGGAATGGAGAACTATTGTAGTTGATGGC

Coding sequence (CDS)

ATGGCGAAGCGCTTGATTCCATCCTTCAATCGTGTCTTGATTGAGAAAATTCTTCCTCCTTCCAAAACCTCTGCCGGCATTCTTCTCCCGGAGAGCTCCACCAAGTTGAACTCCGGCAAGGTGGTTGCGGTGGGACCTGGTGCACGGGATAACAGTGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGCGATACCGTTCTTTTGCCTGAATATGGAGGCACGCCGGTGAAGCTCGGGGAGAAAGAGTTCCATTTATTTAGAGATGAAGACATTTTGGGAACTTTACATGGTTGA

Protein sequence

MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLHG
Homology
[Close]
BLAST of ClCG01G006240 vs. Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.5e-38
Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLH 96

[Close]
BLAST of ClCG01G006240 vs. Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 9.5e-38
Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L++ ++ P+KT +GILLPE ++KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLH 96

[Close]
BLAST of ClCG01G006240 vs. Swiss-Prot
Match: CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-18
Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 3  KRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVK 62
          ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G +  SG + PV VK
Sbjct: 7  RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVK 66

Query: 63 EGDTVLLPEYGGTPVKLGEKEFHLFRDEDILG 94
           GD VLLPEYGGT V L +K++ LFRD DILG
Sbjct: 67 VGDKVLLPEYGGTKVVLDDKDYFLFRDSDILG 98

[Close]
BLAST of ClCG01G006240 vs. Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-18
Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 3  KRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVK 62
          ++ +P F+RVL+E+++  + T  GI+LPE S  K+    VVAVGPG+ +  G + P+ VK
Sbjct: 4  RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVK 63

Query: 63 EGDTVLLPEYGGTPVKLGEKEFHLFRDEDILG 94
           G+ VLLP+YGGT V L +K++ LFRD DILG
Sbjct: 64 VGEKVLLPQYGGTKVVLEDKDYFLFRDADILG 95

[Close]
BLAST of ClCG01G006240 vs. Swiss-Prot
Match: CH10_HUMAN (10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 4.9e-18
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 1 

Query: 3  KRLIPSFNRVLIEKILPPSKTSAGILLPESST-KLNSGKVVAVGPGARDNSGNLVPVCVK 62
          ++ +P F+RVL+E+    + T  GI+LPE S  K+    VVAVG G++   G + PV VK
Sbjct: 7  RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66

Query: 63 EGDTVLLPEYGGTPVKLGEKEFHLFRDEDILG 94
           GD VLLPEYGGT V L +K++ LFRD DILG
Sbjct: 67 VGDKVLLPEYGGTKVVLDDKDYFLFRDGDILG 98

[Close]
BLAST of ClCG01G006240 vs. TrEMBL
Match: M5XHL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013898mg PE=3 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-39
Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIP+ NRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGA+D +GN++PV V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNVIPVAV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLG+KE HL+RDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGDKELHLYRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. TrEMBL
Match: M0TSH4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 81/95 (85.26%), Postives = 88/95 (92.63%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP FNRVL+EKI+PPSKTSAGILLPE +TKLNSGKVVAVGPGARD  G L+PV V
Sbjct: 1  MAKRLIPLFNRVLVEKIVPPSKTSAGILLPEKTTKLNSGKVVAVGPGARDRDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTL 96
          KEGDTVLLPEYGGT VKLGEKE+HL+RD+DILGTL
Sbjct: 61 KEGDTVLLPEYGGTEVKLGEKEYHLYRDDDILGTL 95

[Close]
BLAST of ClCG01G006240 vs. TrEMBL
Match: A0A151RE04_CAJCA (10 kDa chaperonin OS=Cajanus cajan GN=KK1_037772 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPSFNRVLIEKI+PPSKTSAGILLPE S++LNSGKV+AVGPG+RD +GNL+P  V
Sbjct: 1  MAKRLIPSFNRVLIEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDKAGNLIPPSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLHG 98
          KEGD VLLPEYGGT +KL +KEFHLFRDEDILG LHG
Sbjct: 61 KEGDHVLLPEYGGTQIKLDDKEFHLFRDEDILGILHG 97

[Close]
BLAST of ClCG01G006240 vs. TrEMBL
Match: A0A103YAF0_CYNCS (Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_016242 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 2.3e-38
Identity = 79/96 (82.29%), Postives = 87/96 (90.62%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP  NRVL+EKI+PPSKT+AGILLPE S+KLNSGKV+AVGPG RD SGN +PV V
Sbjct: 1  MAKRLIPCLNRVLVEKIVPPSKTTAGILLPEKSSKLNSGKVIAVGPGTRDKSGNTIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
           EGDTVLLPEYGGT VKLGEK++HLFRDEDILGTLH
Sbjct: 61 NEGDTVLLPEYGGTEVKLGEKQYHLFRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. TrEMBL
Match: A0A059D6K0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02909 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.9e-38
Identity = 80/96 (83.33%), Postives = 87/96 (90.62%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRL+P  NRVL+EKI+PPSKT+AGILLPE S KLNSGKVVAVGPGARD  GN VPV V
Sbjct: 1  MAKRLVPLLNRVLVEKIVPPSKTTAGILLPEKSAKLNSGKVVAVGPGARDAHGNAVPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLGEK++HL+RDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGEKDYHLYRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. TAIR10
Match: AT1G14980.1 (AT1G14980.1 chaperonin 10)

HSP 1 Score: 157.9 bits (398), Expect = 3.1e-39
Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          M KRLIP+FNR+L+++++ P+KT +GILLPE S+KLNSGKV+AVGPG+RD  G L+PV V
Sbjct: 1  MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLH 96

[Close]
BLAST of ClCG01G006240 vs. TAIR10
Match: AT1G23100.1 (AT1G23100.1 GroES-like family protein)

HSP 1 Score: 157.5 bits (397), Expect = 4.1e-39
Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIP+ NRVL+EKILPPSKT +GILLPE S++LNSG+V+AVGPGARD +GNL+PV V
Sbjct: 1  MAKRLIPTLNRVLVEKILPPSKTVSGILLPEKSSQLNSGRVIAVGPGARDRAGNLIPVSV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGD VLLPE+GGT VKLGEKEF L+RDEDI+ TLH
Sbjct: 61 KEGDNVLLPEFGGTQVKLGEKEFLLYRDEDIMATLH 96

[Close]
BLAST of ClCG01G006240 vs. TAIR10
Match: AT5G20720.1 (AT5G20720.1 chaperonin 20)

HSP 1 Score: 53.9 bits (128), Expect = 6.3e-08
Identity = 31/76 (40.79%), Postives = 41/76 (53.95%), Query Frame = 1 

Query: 3   KRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNS-GKVVAVGPGARDNSGNLVPVCVK 62
           K L P  +RV I+      KT+ G+LL E++ +  S G V+AVGPG+ D  G + P+ V 
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVS 217

Query: 63  EGDTVLLPEYGGTPVK 78
            G TVL  +Y G   K
Sbjct: 218 TGSTVLYSKYAGNDFK 233

[Close]
BLAST of ClCG01G006240 vs. NCBI nr
Match: gi|659072860|ref|XP_008467132.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis melo])

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-43
Identity = 90/97 (92.78%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MAKRLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD +GNLVPVCV
Sbjct: 1  MAKRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDINGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLHG 98
          KEGDTVLLPEYGGT VKLGEKEFHLFRDEDILGTLHG
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLHG 97

[Close]
BLAST of ClCG01G006240 vs. NCBI nr
Match: gi|449465765|ref|XP_004150598.1| (PREDICTED: 10 kDa chaperonin-like [Cucumis sativus])

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-42
Identity = 89/96 (92.71%), Postives = 93/96 (96.88%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIPS NRVLIEKI+PPSKTSAGILLPESS+KLNSGKV+AVGPGARD SGNLVPVCV
Sbjct: 1  MARRLIPSLNRVLIEKIVPPSKTSAGILLPESSSKLNSGKVIAVGPGARDVSGNLVPVCV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLGEKEFHLFRDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTSVKLGEKEFHLFRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. NCBI nr
Match: gi|658008709|ref|XP_008339549.1| (PREDICTED: 10 kDa chaperonin-like [Malus domestica])

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 83/96 (86.46%), Postives = 92/96 (95.83%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIP+ NRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGA+D +GNL+PV V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNLIPVAV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLG+KEFHL+RDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTQVKLGDKEFHLYRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. NCBI nr
Match: gi|657993833|ref|XP_008389212.1| (PREDICTED: 10 kDa chaperonin-like [Malus domestica])

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 83/96 (86.46%), Postives = 92/96 (95.83%), Query Frame = 1 

Query: 1  MAKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCV 60
          MA+RLIP+ NRVLIEKI+PPSKT+AGILLPESSTKLNSGKVVAVGPGA+D +GNL+PV V
Sbjct: 1  MARRLIPTLNRVLIEKIIPPSKTTAGILLPESSTKLNSGKVVAVGPGAKDKAGNLIPVAV 60

Query: 61 KEGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTLH 97
          KEGDTVLLPEYGGT VKLG+KEFHL+RDEDILGTLH
Sbjct: 61 KEGDTVLLPEYGGTEVKLGDKEFHLYRDEDILGTLH 96

[Close]
BLAST of ClCG01G006240 vs. NCBI nr
Match: gi|1009155006|ref|XP_015895483.1| (PREDICTED: 10 kDa chaperonin-like [Ziziphus jujuba])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 81/94 (86.17%), Postives = 90/94 (95.74%), Query Frame = 1 

Query: 2  AKRLIPSFNRVLIEKILPPSKTSAGILLPESSTKLNSGKVVAVGPGARDNSGNLVPVCVK 61
          AKRLIP+ NR+LIEKI+PPSKT+AG+LLPESSTKLNSGKVVAVGPGARD SGN++PVCVK
Sbjct: 3  AKRLIPTLNRILIEKIVPPSKTTAGVLLPESSTKLNSGKVVAVGPGARDKSGNVIPVCVK 62

Query: 62 EGDTVLLPEYGGTPVKLGEKEFHLFRDEDILGTL 96
          EGDTVLLPEYGGT VKLG+KEFHL+RDEDILG L
Sbjct: 63 EGDTVLLPEYGGTQVKLGDKEFHLYRDEDILGKL 96

The following BLAST results are available for this feature:
BLAST of ClCG01G006240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CH10_ARATH5.5e-3873.9610 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1[more]
CH10_BRANA9.5e-3873.9610 kDa chaperonin OS=Brassica napus PE=3 SV=1[more]
CH10_MOUSE1.3e-1852.1710 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2[more]
CH10_ORYLA2.2e-1848.9110 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1[more]
CH10_HUMAN4.9e-1851.0910 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2[more]
BLAST of ClCG01G006240 vs. TrEMBL
Match NameE-valueIdentityDescription
M5XHL1_PRUPE1.6e-3984.38Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013898mg PE=3 SV=1[more]
M0TSH4_MUSAM1.0e-3885.26Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=3 SV=1[more]
A0A151RE04_CAJCA1.7e-3882.4710 kDa chaperonin OS=Cajanus cajan GN=KK1_037772 PE=3 SV=1[more]
A0A103YAF0_CYNCS2.3e-3882.29Chaperonin Cpn10 OS=Cynara cardunculus var. scolymus GN=Ccrd_016242 PE=3 SV=1[more]
A0A059D6K0_EUCGR3.9e-3883.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02909 PE=3 SV=1[more]
BLAST of ClCG01G006240 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G14980.13.1e-3973.96 chaperonin 10[more]
AT1G23100.14.1e-3978.13 GroES-like family protein[more]
AT5G20720.16.3e-0840.79 chaperonin 20[more]
BLAST of ClCG01G006240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072860|ref|XP_008467132.1|2.6e-4392.78PREDICTED: 10 kDa chaperonin-like [Cucumis melo][more]
gi|449465765|ref|XP_004150598.1|1.3e-4292.71PREDICTED: 10 kDa chaperonin-like [Cucumis sativus][more]
gi|658008709|ref|XP_008339549.1|2.0e-4086.46PREDICTED: 10 kDa chaperonin-like [Malus domestica][more]
gi|657993833|ref|XP_008389212.1|2.0e-4086.46PREDICTED: 10 kDa chaperonin-like [Malus domestica][more]
gi|1009155006|ref|XP_015895483.1|1.3e-3986.17PREDICTED: 10 kDa chaperonin-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011032GroES-like_sf
IPR020818Chaperonin_GroES
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0009408 response to heat
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003674 molecular_function
molecular_function GO:0016757 transferase activity, transferring glycosyl groups
molecular_function GO:0005507 copper ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G006240.1ClCG01G006240.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011032GroES-likeunknownSSF50129GroES-likecoord: 4..95
score: 4.83
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 5..20
score: 2.7E-15coord: 82..95
score: 2.7E-15coord: 61..73
score: 2.7E-15coord: 26..47
score: 2.7
IPR020818GroES chaperonin familyGENE3DG3DSA:2.30.33.40coord: 3..95
score: 1.2
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..96
score: 3.4
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 6..94
score: 3.3
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 4..95
score: 6.1
NoneNo IPR availablePANTHERPTHR10772:SF9GROES-LIKE PROTEINcoord: 1..96
score: 3.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G006240Csa5G570400Cucumber (Chinese Long) v2cuwcgB372
ClCG01G006240MELO3C005305Melon (DHL92) v3.5.1mewcgB019
ClCG01G006240Cla003925Watermelon (97103) v1wcgwmB143
ClCG01G006240Cla97C01G006550Watermelon (97103) v2wcgwmbB089
ClCG01G006240CSPI05G19570Wild cucumber (PI 183967)cpiwcgB388
ClCG01G006240Cucsa.280360Cucumber (Gy14) v1cgywcgB484
ClCG01G006240CmaCh04G021300Cucurbita maxima (Rimu)cmawcgB638
ClCG01G006240CmoCh04G022250Cucurbita moschata (Rifu)cmowcgB640
ClCG01G006240Lsi09G006590Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G006240Cp4.1LG01g18500Cucurbita pepo (Zucchini)cpewcgB373
ClCG01G006240CsGy5G019080Cucumber (Gy14) v2cgybwcgB340
ClCG01G006240MELO3C005305.2Melon (DHL92) v3.6.1medwcgB017
ClCG01G006240Carg25243Silver-seed gourdcarwcgB0857
ClCG01G006240CsaV3_5G028420Cucumber (Chinese Long) v3cucwcgB394
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G006240Cucurbita moschata (Rifu)cmowcgB638
ClCG01G006240Cucurbita maxima (Rimu)cmawcgB257
ClCG01G006240Cucurbita maxima (Rimu)cmawcgB634
ClCG01G006240Cucurbita maxima (Rimu)cmawcgB636
ClCG01G006240Cucurbita moschata (Rifu)cmowcgB245
ClCG01G006240Cucurbita moschata (Rifu)cmowcgB636
ClCG01G006240Cucurbita pepo (Zucchini)cpewcgB169
ClCG01G006240Cucurbita pepo (Zucchini)cpewcgB370
ClCG01G006240Cucurbita pepo (Zucchini)cpewcgB371
ClCG01G006240Cucumber (Gy14) v2cgybwcgB336
ClCG01G006240Silver-seed gourdcarwcgB0170
ClCG01G006240Silver-seed gourdcarwcgB0183
ClCG01G006240Silver-seed gourdcarwcgB0419
ClCG01G006240Cucumber (Chinese Long) v3cucwcgB389
ClCG01G006240Watermelon (97103) v2wcgwmbB120
ClCG01G006240Wax gourdwcgwgoB191