CsaV3_5G024030 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G024030
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	BHLH transcription factor
Location	chr5 : 18711066 .. 18713891 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAAAGAAGATTAAAAAAAGAAAAAGGAAATTTATATAATATAGTCTTTAAATATTAAAAAAAAAATAGCATTGGATTAGTTAGAAGCTCCCTACAAATAGAGACCAAAAAAGTACGAGTGTTGTGTATCCTTTTGAGTACTTTTAAAGTCACTTTTCATTCTCTTCTACTTTCTCTCTCTCAAATGGCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGCGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCATCAGAATCCAAATGGTGACTTTGTGTTCCGAGACACCACGAATTATCAACTCGGTCAGCAGCAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAGTCTTTGTTGAGCTTTGAAGCACAAGGGATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGCAACGTGTGATGGAAGACCCTAATTGCTTTCAGACAGCTACAAATCATAATAATTATAGTCCTTCAAAAGATCATCATCACCATAATAAAAATGGAGATAATGGTTCTGTTTATGAGTGGCTTTATTCTGAATCAACAACTGATTTTTCCGATTCCATTCAAGAAGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCCCATACTACGGTACGAAGTTAATAAGTTTAGTCTTTCAACTTTTCAAAAAAACAAAATTATCAATTCCTTCTTTCTTAAAATTTGATTTAATTTGTATGCATATCTGATTTTGACTTTTGATATTTTTGGAAATTAAGTTTATGATTAAACACTAGCTACACTTCTTTTTCTTATTCTTTACAACTTAAAAAATTAGTTCAAACCCATTTTCCACAGTTCCAGCTAATTTTTAGTTTTTTATAATTTTATTTTTCATCTTCCAATTTAATTGTGGATCCAAATGTTTCTTTTATAAAGAAACGGTCAGTAAATAAACTATCATTTAAAAAAGAAAACCATTAAATGGTTATCAAAATAGAGTTTATATATCAAATTTTAAAACTAACCTATTGGAAGCTCAAAACTCTATTAAGATCGTAAGATTTAATAATCTTTTCAACGTGGGATCTTTACTATGACGCATTAAGTTAGATTAGTGTTTCTTTCGGTTCACCGTTTTTCGGTGGAAAATCCATTTTTGGGTAGTGGTTTCGTAAACTGTAATATAGTAGGTAAAACATGGAGTGAGTGTTTTTGTTTATTGATAAATTGTTGTGAAGTGACTAAGAGGGGAAATTTTGTTATTGAAAATTGAAAGGGAGAGAGCAGTGGGAGTGTATGTAAGAAGCAATGTACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGGTTTCTTTCTACTATTATTATTATTATTATTTTGCTTGTGATTTAAGCAACAAAAAGAATTTAGTTAGGGTTCTGAAAGAATGTCTGTTTTGCTTTGTTTGTTTTATTACTTAGAATCGACGAGAAAGGATTAGCGAGAGGTTGAAGATACTCCAAGAATTGGTTCCCAATGGCTCTAAGGTGATTCTTGCCATCCTATTACTTTTTCTTTTCTTAATAAAATTAAAATTGTTCATTTGTAATTTTTGTTTCAATAGTTAGAGTTTAGGTTATATGGTTTTGGGTTTATTAAACAATCCTATTATAATGACAATTTTTTTTCAAATCATATAATAACTATTTTTAAAATCATATGTTGATATTTTAACAAGAGTTTTATTGGAAATTTGTTAGTTTCTTAACCTAATAAGTTCTTTCTCATTCAAAACTAATTTTAATTTCTTTACCAAAAAGAAAATTCTAACATTTACTTTTTCAAATTTTAATGGAAAGCAAAATATACTTAAATTTTCCTAGAAAAGCAAAAAGAAACATCCCATAATAACAATAAATAAATTATCGTTTTAGTTTCCAAATTTGAATGAATATGTATTCAATAAACTCATTTATTCTTTGAGTTTTTTGAAAATATATTTAAAAGTATTTGTTGGATTTTTTTAAAAATTAATTATATAGTATTTAAAATTAGAGAAACAAAGTATGATTTTTAGAAATTATTTTTAAAATTAAATTTGGACGAAAAGAAAAAAAAAAAAAAAGAGGAATAATAAAGCTGTAAAATAAGAAAAGGTTTGACATTTTAAAATAAAATAAAAAGAATCAAAATTTGCAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTAAAATTTCTTCAACTACAAGTGAAGGTACACTATTTTACTTTCTTTCAAGAATTTTAACTTCATCACTTTCTTACTTTTTAACATTAATTCGATCTGTTATATCTTCATTCAGATCCTAGCAACCGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGATCAAATATCATACTGTTTATTGTCATCCTTAACTTCTTCTTGGTAGATAGAATTTATGACACCAATTTTATATACTTTTCAATAATTCATATTCCCTTAAGTAATTAATAAACTATTCTCATTTGTTTTGAAAGTCAGCCATTGCTCTGACAGCAAGATTGGGATCAGAAATTAATGTATGATTCTTCTTTCTTTTTTTTGTTGATGAAGGTGGAAAATTGTTTGTTCTGATCATATAGCTAGTTGTCAATTTAATGAAGGCCCATTAAAATCAATTTGAAATTATTTTTTAAGAATCTACTA

mRNA sequence

ATGGCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGCGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCATCAGAATCCAAATGGTGACTTTGTGTTCCGAGACACCACGAATTATCAACTCGGTCAGCAGCAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAGTCTTTGTTGAGCTTTGAAGCACAAGGGATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGCAACGTGTGATGGAAGACCCTAATTGCTTTCAGACAGCTACAAATCATAATAATTATAGTCCTTCAAAAGATCATCATCACCATAATAAAAATGGAGATAATGGTTCTGTTTATGAGTGGCTTTATTCTGAATCAACAACTGATTTTTCCGATTCCATTCAAGAAGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCCCATACTACGGGAGAGAGCAGTGGGAGTGTATGTAAGAAGCAATGTACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGAATCGACGAGAAAGGATTAGCGAGAGGTTGAAGATACTCCAAGAATTGGTTCCCAATGGCTCTAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTAAAATTTCTTCAACTACAAGTGAAGATCCTAGCAACCGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA

Coding sequence (CDS)

ATGGCACTTGCAAATTCAGCTATACAAGAAGTTGATGGCATGGAGAAAAATGGCGGTGGATATTTGAAGAGTTTAGCCATTGGAAAAGGCCATGATCATCAGAATCCAAATGGTGACTTTGTGTTCCGAGACACCACGAATTATCAACTCGGTCAGCAGCAACAACAATCTCTCATCAACTTCGGTCATAAGATGAATAATGAGTCTTTGTTGAGCTTTGAAGCACAAGGGATTTGTCAATTAGATCTCACTTATAATTGGGATGATCAGCAACGTGTGATGGAAGACCCTAATTGCTTTCAGACAGCTACAAATCATAATAATTATAGTCCTTCAAAAGATCATCATCACCATAATAAAAATGGAGATAATGGTTCTGTTTATGAGTGGCTTTATTCTGAATCAACAACTGATTTTTCCGATTCCATTCAAGAAGCTGAAGGAACTCAAGAGATTGTTCCCAATCACAAGCGATCCCATACTACGGGAGAGAGCAGTGGGAGTGTATGTAAGAAGCAATGTACTGCTGCACCTAAGAAACAGAAACCCAAATCAGCAACAGCCAAAGATCCACAAAGCATTGCAGCCAAGAATCGACGAGAAAGGATTAGCGAGAGGTTGAAGATACTCCAAGAATTGGTTCCCAATGGCTCTAAGGTTGATTTGGTAACCATGTTGGAGAAAGCAATTAGTTATGTAAAATTTCTTCAACTACAAGTGAAGATCCTAGCAACCGATGAATTTTGGCCAGTTCAAGGTGGGAAAGCTCCAGATATTTCACAAGTAAAGGAAGCCATTGATGTCATTCTTTCATCTCAAAGAGAAAGAAGCTCAAGCTCAAACAGTGAAAAGTGA

Protein sequence

MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLINFGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKDHHHHNKNGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK

Homology

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BLAST of CsaV3_5G024030 vs. NCBI nr
Match: XP_004140364.1 (PREDICTED: putative transcription factor bHLH086 [Cucumis sativus] >KGN51045.1 hypothetical protein Csa_5G420280 [Cucumis sativus])

HSP 1 Score: 537.7 bits (1384), Expect = 2.3e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60
           MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60

Query: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120
           FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX
Sbjct: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120

Query: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180
           XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK
Sbjct: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180

Query: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240
           QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV
Sbjct: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of CsaV3_5G024030 vs. NCBI nr
Match: XP_008460515.1 (PREDICTED: putative transcription factor bHLH086 [Cucumis melo])

HSP 1 Score: 507.3 bits (1305), Expect = 3.4e-140
Identity = 264/284 (92.96%), Postives = 272/284 (95.77%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60
           M+LANSAIQEVDGMEKNGGGYLKSLAIGKGHD QNPNGDFVFRD TNYQLG QQQQSLIN
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHD-QNPNGDFVFRDATNYQLGLQQQQSLIN 60

Query: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120
           FGHKMNNESLLSFEAQGICQLDLTYNWDDQ+RVMEDPNCFQTAT+HNNYSPSK       
Sbjct: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNYSPSK-DHHHNK 120

Query: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180
            G++GSVYEWLY ESTTDFSDSIQ+AEGTQEIVPNHKRSH+TGESSGSVCKKQCTAAPKK
Sbjct: 121 NGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVCKKQCTAAPKK 180

Query: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240
           QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV
Sbjct: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of CsaV3_5G024030 vs. NCBI nr
Match: XP_022990966.1 (putative transcription factor bHLH086 [Cucurbita maxima])

HSP 1 Score: 352.1 bits (902), Expect = 1.8e-93
Identity = 215/298 (72.15%), Postives = 228/298 (76.51%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQ------ 60
           MALANS++ E DGM+K  GGY+KSL I     H  PN  F+FR+TTNYQL          
Sbjct: 1   MALANSSVHEADGMDK-AGGYIKSLPIA---THDTPNATFLFRNTTNYQLDHXXXXXXXL 60

Query: 61  QQSLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHN 120
            QSLINF        HK NNESLLSFE QG+CQ   TYNWDD QR+MEDPNCFQTAT  N
Sbjct: 61  PQSLINFKCGIDNIFHK-NNESLLSFEPQGVCQ--DTYNWDDHQRLMEDPNCFQTAT--N 120

Query: 121 NYSPSKXXXXXXXXGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSG 180
            YS  K          +GSVY+WLYSE+ T  SD IQEAEG  EI  N KR H  GESSG
Sbjct: 121 GYSSPK-----ENKNGDGSVYDWLYSEA-TGVSDGIQEAEGAHEIA-NQKRPH-MGESSG 180

Query: 181 SVCKKQCT-AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 240
           SV KKQCT AA KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML
Sbjct: 181 SVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTML 240

Query: 241 EKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           EKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNS+K
Sbjct: 241 EKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 281

[Close]

BLAST of CsaV3_5G024030 vs. NCBI nr
Match: XP_023528222.1 (putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 213/297 (71.72%), Postives = 229/297 (77.10%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQ----- 60
           MALANS++ E DGM+K  GGY+KS+ I     H  PN  F+FR+TTNYQL   QQ     
Sbjct: 1   MALANSSVHEADGMDK-AGGYIKSIPIA---THDTPNATFLFRNTTNYQLDHHQQQQQLP 60

Query: 61  QSLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNN 120
           QSLINF        HK NNESLLSFE QG+ Q   TYNWDD QR+MEDPNCFQTAT  N 
Sbjct: 61  QSLINFKCGIDNIFHK-NNESLLSFEPQGVGQ--DTYNWDDHQRLMEDPNCFQTAT--NG 120

Query: 121 YSPSKXXXXXXXXGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGS 180
           YS  K          +GSVY+WLYSE+ +  SD+IQEAEG  EI  N KR H  GESSGS
Sbjct: 121 YSSPK-----ENKNGDGSVYDWLYSEA-SGVSDAIQEAEGAHEIA-NQKRPH-MGESSGS 180

Query: 181 VCKKQC-TAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 240
           V KKQC T A KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE
Sbjct: 181 VSKKQCTTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLE 240

Query: 241 KAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           KAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNS+K
Sbjct: 241 KAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK 280

[Close]

BLAST of CsaV3_5G024030 vs. NCBI nr
Match: XP_022963447.1 (putative transcription factor bHLH086 [Cucurbita moschata])

HSP 1 Score: 345.9 bits (886), Expect = 1.3e-91
Identity = 212/301 (70.43%), Postives = 228/301 (75.75%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQ------ 60
           MALANS++ E DGM+K  GGY+KS+ I     H  PN  F+FR+TTNYQL          
Sbjct: 1   MALANSSVHEADGMDK-AGGYIKSIPIA---THDTPNATFLFRNTTNYQLDXXXXXXXXX 60

Query: 61  ---QQSLINFG-------HKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTAT 120
                SLINF        HK NNESLLSFE QG+CQ   TYNWDD QR+MEDPNCFQTAT
Sbjct: 61  XXLPHSLINFKCGIDSIFHK-NNESLLSFEPQGVCQ--DTYNWDDHQRLMEDPNCFQTAT 120

Query: 121 NHNNYSPSKXXXXXXXXGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGE 180
             N YS  K          +GSVY+WLYSE+ +  SD+IQEAEG  E V N KR H  GE
Sbjct: 121 --NGYSSPK-----ENKNGDGSVYDWLYSEA-SGVSDAIQEAEGAHE-VANQKRPH-MGE 180

Query: 181 SSGSVCKKQCT-AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 240
           SSGSV KKQCT AA KKQKPKS+TAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV
Sbjct: 181 SSGSVSKKQCTAAAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLV 240

Query: 241 TMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSE 285
           TMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAID ILSSQRERSSSSNS+
Sbjct: 241 TMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQ 284

[Close]

BLAST of CsaV3_5G024030 vs. TAIR10
Match: AT1G66470.1 (ROOT HAIR DEFECTIVE6)

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-42
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 0


Query: 129 EWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATA 188
           +WLYS+ST   + S  E+   +     +KRSH TGES+    KK  +    K KPK  T+
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKS--AGNKRSH-TGEST-QPSKKLSSGVTGKTKPKPTTS 205

Query: 189 -KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDE 248
            KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDE
Sbjct: 206 PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDE 265

Query: 249 FWPVQGGKAPDISQVKEAIDVIL-SSQRERSSS 280
           FWP QGGKAPDISQVK+AID IL SSQR+R+S+
Sbjct: 266 FWPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of CsaV3_5G024030 vs. TAIR10
Match: AT5G37800.1 (RHD SIX-LIKE 1)

HSP 1 Score: 162.2 bits (409), Expect = 4.9e-40
Identity = 124/270 (45.93%), Postives = 157/270 (58.15%), Query Frame = 0


Query: 32  DHQNPNGDFVFRDTTNYQLGQ--QQQQSLINFGHKM-----NNESLLSFEAQG----ICQ 91
           DHQN  G FVF     Y  G+  +   SL++F         N+ SL+S    G    +  
Sbjct: 46  DHQNNQG-FVF-----YPSGETIEDHNSLMDFNASSFFTFDNHRSLISPVTNGGAFPVVD 105

Query: 92  LDLTYNWDD---------QQRVMEDPNCFQTATNHNNYSPSKXXXXXXXXGDNGSVYEWL 151
            +++Y++D            RV++ PN F+T ++    S S           N    +WL
Sbjct: 106 GNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSNS-----MSKPATNHGNGDWL 165

Query: 152 YSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATA-KD 211
           YS ST     S    E T   +  +KR   TGE++  +            KPK+ T+ KD
Sbjct: 166 YSGSTIVNIGS--RHESTSPKLAGNKRPF-TGENT-QLSXXXXXXXXXXXKPKATTSPKD 225

Query: 212 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWP 271
           PQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP
Sbjct: 226 PQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWP 285

Query: 272 VQGGKAPDISQVKEAIDVILSSQRERSSSS 281
            QGGKAPDISQVKEAID ILSS +  S+S+
Sbjct: 286 AQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of CsaV3_5G024030 vs. TAIR10
Match: AT4G33880.1 (ROOT HAIR DEFECTIVE 6-LIKE 2)

HSP 1 Score: 88.6 bits (218), Expect = 6.8e-18
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 180 KQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 239
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 240 VKILATDEFW 250
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of CsaV3_5G024030 vs. TAIR10
Match: AT1G27740.1 (root hair defective 6-like 4)

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 140 SDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNR 199
           S+S    E     V     S+++ +   SV     T+   K +    TA DPQS+ A+ R
Sbjct: 131 SESNTVDESNTNWVDGQSLSNSSDDEKASV-----TSVKGKTRATKGTATDPQSLYARKR 190

Query: 200 RERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 250
           RE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 191 REKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of CsaV3_5G024030 vs. TAIR10
Match: AT5G43175.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 4.4e-17
Identity = 42/71 (59.15%), Postives = 56/71 (78.87%), Query Frame = 0


Query: 179 KKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQL 238
           +K K     A DPQS+ A+ RRERI++RLK LQ LVPNG+KVD+ TMLE A+ YVKFLQL
Sbjct: 130 RKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQL 189

Query: 239 QVKILATDEFW 250
           Q+K+L++++ W
Sbjct: 190 QIKLLSSEDLW 200

[Close]

BLAST of CsaV3_5G024030 vs. Swiss-Prot
Match: sp|Q9C707|BH083_ARATH (Transcription factor bHLH83 OS=Arabidopsis thaliana OX=3702 GN=BHLH83 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41
Identity = 104/153 (67.97%), Postives = 121/153 (79.08%), Query Frame = 0


Query: 129 EWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATA 188
           +WLYS+ST   + S  E+   +     +KRSH TGES+    KK  +    K KPK  T+
Sbjct: 146 DWLYSDSTVVTTGSRNESLSPKS--AGNKRSH-TGEST-QPSKKLSSGVTGKTKPKPTTS 205

Query: 189 -KDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDE 248
            KDPQS+AAKNRRERISERLKILQELVPNG+KVDLVTMLEKAISYVKFLQ+QVK+LATDE
Sbjct: 206 PKDPQSLAAKNRRERISERLKILQELVPNGTKVDLVTMLEKAISYVKFLQVQVKVLATDE 265

Query: 249 FWPVQGGKAPDISQVKEAIDVIL-SSQRERSSS 280
           FWP QGGKAPDISQVK+AID IL SSQR+R+S+
Sbjct: 266 FWPAQGGKAPDISQVKDAIDAILSSSQRDRNSN 294

[Close]

BLAST of CsaV3_5G024030 vs. Swiss-Prot
Match: sp|Q9FJ00|BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 PE=3 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 8.8e-39
Identity = 124/270 (45.93%), Postives = 157/270 (58.15%), Query Frame = 0


Query: 32  DHQNPNGDFVFRDTTNYQLGQ--QQQQSLINFGHKM-----NNESLLSFEAQG----ICQ 91
           DHQN  G FVF     Y  G+  +   SL++F         N+ SL+S    G    +  
Sbjct: 46  DHQNNQG-FVF-----YPSGETIEDHNSLMDFNASSFFTFDNHRSLISPVTNGGAFPVVD 105

Query: 92  LDLTYNWDD---------QQRVMEDPNCFQTATNHNNYSPSKXXXXXXXXGDNGSVYEWL 151
            +++Y++D            RV++ PN F+T ++    S S           N    +WL
Sbjct: 106 GNMSYSYDGWSHHQVDSISPRVIKTPNSFETTSSFGLTSNS-----MSKPATNHGNGDWL 165

Query: 152 YSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATA-KD 211
           YS ST     S    E T   +  +KR   TGE++  +            KPK+ T+ KD
Sbjct: 166 YSGSTIVNIGS--RHESTSPKLAGNKRPF-TGENT-QLSXXXXXXXXXXXKPKATTSPKD 225

Query: 212 PQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWP 271
           PQS+AAKNRRERISERLK+LQELVPNG+KVDLVTMLEKAI YVKFLQ+QVK+LA DEFWP
Sbjct: 226 PQSLAAKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVKVLAADEFWP 285

Query: 272 VQGGKAPDISQVKEAIDVILSSQRERSSSS 281
            QGGKAPDISQVKEAID ILSS +  S+S+
Sbjct: 286 AQGGKAPDISQVKEAIDAILSSSQRDSNST 300

[Close]

BLAST of CsaV3_5G024030 vs. Swiss-Prot
Match: sp|Q7XHI9|BH084_ARATH (Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.4e-17
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 180 KQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 239
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ 295

Query: 240 VKILATDEFW 250
           +K+L++D+ W
Sbjct: 296 IKLLSSDDLW 305

[Close]

BLAST of CsaV3_5G024030 vs. Swiss-Prot
Match: sp|Q84WK0|BH085_ARATH (Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 180 KQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQ 239
           K +     A DPQS+ A+ RRERI+ERL+ILQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQ 324

Query: 240 VKILATDEFW 250
           +K+L++D+ W
Sbjct: 325 IKLLSSDDLW 334

[Close]

BLAST of CsaV3_5G024030 vs. Swiss-Prot
Match: sp|Q8LEG1|BH054_ARATH (Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.1e-16
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 140 SDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNR 199
           S+S    E     V     S+++ +   SV     T+   K +    TA DPQS+ A+ R
Sbjct: 131 SESNTVDESNTNWVDGQSLSNSSDDEKASV-----TSVKGKTRATKGTATDPQSLYARKR 190

Query: 200 RERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFW 250
           RE+I+ERLK LQ LVPNG+KVD+ TMLE+A+ YVKFLQLQ+K+L++D+ W
Sbjct: 191 REKINERLKTLQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDLW 235

[Close]

BLAST of CsaV3_5G024030 vs. TrEMBL
Match: tr|A0A0A0KN55|A0A0A0KN55_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.6e-149
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60
           MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN
Sbjct: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60

Query: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120
           FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX
Sbjct: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120

Query: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180
           XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK
Sbjct: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180

Query: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240
           QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV
Sbjct: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 284

[Close]

BLAST of CsaV3_5G024030 vs. TrEMBL
Match: tr|A0A1S3CCR8|A0A1S3CCR8_CUCME (putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 2.2e-140
Identity = 264/284 (92.96%), Postives = 272/284 (95.77%), Query Frame = 0


Query: 1   MALANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQNPNGDFVFRDTTNYQLGQQQQQSLIN 60
           M+LANSAIQEVDGMEKNGGGYLKSLAIGKGHD QNPNGDFVFRD TNYQLG QQQQSLIN
Sbjct: 1   MSLANSAIQEVDGMEKNGGGYLKSLAIGKGHD-QNPNGDFVFRDATNYQLGLQQQQSLIN 60

Query: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQQRVMEDPNCFQTATNHNNYSPSKXXXXXXX 120
           FGHKMNNESLLSFEAQGICQLDLTYNWDDQ+RVMEDPNCFQTAT+HNNYSPSK       
Sbjct: 61  FGHKMNNESLLSFEAQGICQLDLTYNWDDQERVMEDPNCFQTATSHNNYSPSK-DHHHNK 120

Query: 121 XGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKK 180
            G++GSVYEWLY ESTTDFSDSIQ+AEGTQEIVPNHKRSH+TGESSGSVCKKQCTAAPKK
Sbjct: 121 NGNSGSVYEWLYCESTTDFSDSIQDAEGTQEIVPNHKRSHSTGESSGSVCKKQCTAAPKK 180

Query: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240
           QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV
Sbjct: 181 QKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQV 240

Query: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNSEK 285
           KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSN+EK
Sbjct: 241 KILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSSNTEK 282

[Close]

BLAST of CsaV3_5G024030 vs. TrEMBL
Match: tr|A0A2I4EB43|A0A2I4EB43_9ROSI (putative transcription factor bHLH086 OS=Juglans regia OX=51240 GN=LOC108987995 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.9e-55
Identity = 163/323 (50.46%), Postives = 196/323 (60.68%), Query Frame = 0


Query: 4   ANSAIQEVDGMEKNGGGYLKSLAIGKGHDHQ---------NPNGDFVFRDTTNYQLGQQQ 63
           + + +QE D +E   G  +K   IG GH            N N  FVF  T+NYQ  +  
Sbjct: 37  SKAVLQEEDFLE--NGVVIKD--IGMGHSSSVLFGPCSSVNSNASFVFTATSNYQPEEAA 96

Query: 64  QQSLINFGHKMNN-----ESLLSFEAQGICQLDLTY--------------------NWDD 123
             SLI+F     N     ESLLSFE      L+  +                    N+  
Sbjct: 97  DHSLIDFKGGYGNFMHACESLLSFEQSERASLNSNFLKTNNHKDEYSMWEQANFSQNYQR 156

Query: 124 QQ------------RVMEDPNCFQTATNHNNYSPSKXXXXXXXXGDNGSVYEWLYSESTT 183
            Q            R++E+ +CFQTA+N +  S +         G++G+ Y WLYSE+T 
Sbjct: 157 NQISTTTPKCGTDPRLLEELSCFQTASNDS--SITNTSAKEREHGEDGT-YGWLYSEATV 216

Query: 184 DFSDSIQEAEGTQEIVPNHKRSHTTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAK 243
             +DSIQE+  T E    HKR H  GE + ++ KKQCT A KK KPKS++ KDPQSIAAK
Sbjct: 217 -VTDSIQES--THE-TSFHKRVH-MGERTQAL-KKQCTNANKKPKPKSSSPKDPQSIAAK 276

Query: 244 NRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAP 281
           NRRERISERLK+LQELVPNGSKVDLVTMLEKAISYVKFLQLQVK+LATDEFWP QGGKAP
Sbjct: 277 NRRERISERLKVLQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPAQGGKAP 336

[Close]

BLAST of CsaV3_5G024030 vs. TrEMBL
Match: tr|A0A1R3GBT5|A0A1R3GBT5_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27201 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.5e-54
Identity = 155/303 (51.16%), Postives = 191/303 (63.04%), Query Frame = 0


Query: 12  DGMEKNGGGYLKSLAIGKGHDHQNPN-----GDFVFRDTTNYQLGQQ--QQQSLINFGHK 71
           + +EKN GG +K+ ++       +P+     G FVF+   NY   Q+     SLI+F H 
Sbjct: 20  EALEKNSGGIVKNFSMTSSSSFSSPSSVSSEGGFVFQG-VNYHQPQESDHNNSLISFMHG 79

Query: 72  MNNESLLSFEAQGICQLDLTY------------NWDDQQ--------------RVMEDPN 131
            NN SLLSFE      L  TY             WD QQ              R++ED N
Sbjct: 80  GNNGSLLSFEQNERVVLQNTYLKTSSCEKDDYGIWDQQQDYNQWNQKSISTDPRLVEDFN 139

Query: 132 CFQTATNHNNYSPSKXXXXXXXXGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKR 191
           CF+TA+N N+ + +          ++G   +WLYSE     +DS+QE+   +   P  KR
Sbjct: 140 CFETASNFNSMASATKDH------NHG---DWLYSEVAV-VADSVQESGSPES--PGLKR 199

Query: 192 SHTTGESSGSVCKKQCTAAPKKQK-PKSATAKDPQSIAAKNRRERISERLKILQELVPNG 251
            +  GE++ ++ KKQCT   KK K  KS  +KDPQSIAAKNRRERISERLKILQ+LVPNG
Sbjct: 200 PN-KGENTQAL-KKQCTNEAKKAKTTKSGPSKDPQSIAAKNRRERISERLKILQDLVPNG 259

Query: 252 SKVDLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERS 281
           SKVDLVTMLEKAISYVKFLQLQVK+LATDEFWPVQGGKAPDISQV+EAID ILSSQR+R+
Sbjct: 260 SKVDLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDISQVREAIDAILSSQRDRN 307

[Close]

BLAST of CsaV3_5G024030 vs. TrEMBL
Match: tr|B9T2K1|B9T2K1_RICCO (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0285440 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.6e-53
Identity = 154/303 (50.83%), Postives = 188/303 (62.05%), Query Frame = 0


Query: 16  KNGGGYLKSLAIGK------GHDHQNPNGDFVFRDTTNYQLGQQQQQSLINF-----GHK 75
           + G   +K+LA+        G      + +F+F    +     +   SLINF     G  
Sbjct: 41  EEGESNIKNLAMSHSYSSSLGSPSSANSNEFLFHSARHQ--AHEGAHSLINFRGGYDGFL 100

Query: 76  MNNESLLSFE---------AQGI--------CQLDLTYNWDDQQ-------RVMEDPNCF 135
             N SLLSFE         + G+           +  Y W+          R++E+ NCF
Sbjct: 101 HGNGSLLSFEQNNKVSSQTSSGLKEDYSTWEVDFNCNYQWNQMNPKSSADPRLVENINCF 160

Query: 136 QTATNHNNYSPSKXXXXXXXXGDNGSVYEWLYSESTTDFSDSIQEAEGTQEIVPNHKRSH 195
            TA+N N+   S+         D G   +WLYSE T     SIQE  GTQ+    HKR H
Sbjct: 161 HTASNFNSIDNSEKE-------DPG---DWLYSEGTIITDHSIQE-PGTQD-ANFHKRPH 220

Query: 196 TTGESSGSVCKKQCTAAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSKV 255
             GES+ +V KKQC +A KKQKPK++ +KDPQSIAAKNRRERISERLKILQELVPNGSKV
Sbjct: 221 -MGESTQAV-KKQCNSATKKQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSKV 280

Query: 256 DLVTMLEKAISYVKFLQLQVKILATDEFWPVQGGKAPDISQVKEAIDVILSSQRERSSSS 284
           DLVTMLEKAISYVKFLQLQVK+LATDEFWPVQGGKAPD+SQVKEAID ILSSQ++R+SSS
Sbjct: 281 DLVTMLEKAISYVKFLQLQVKVLATDEFWPVQGGKAPDVSQVKEAIDAILSSQKDRNSSS 327

The following BLAST results are available for this feature:

BLAST of CsaV3_5G024030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140364.1	2.3e-149	100.00	PREDICTED: putative transcription factor bHLH086 [Cucumis sativus] >KGN51045.1 h...	[more]
XP_008460515.1	3.4e-140	92.96	PREDICTED: putative transcription factor bHLH086 [Cucumis melo]	[more]
XP_022990966.1	1.8e-93	72.15	putative transcription factor bHLH086 [Cucurbita maxima]	[more]
XP_023528222.1	1.2e-92	71.72	putative transcription factor bHLH086 [Cucurbita pepo subsp. pepo]	[more]
XP_022963447.1	1.3e-91	70.43	putative transcription factor bHLH086 [Cucurbita moschata]	[more]

BLAST of CsaV3_5G024030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66470.1	1.0e-42	67.97	ROOT HAIR DEFECTIVE6	[more]
AT5G37800.1	4.9e-40	45.93	RHD SIX-LIKE 1	[more]
AT4G33880.1	6.8e-18	61.43	ROOT HAIR DEFECTIVE 6-LIKE 2	[more]
AT1G27740.1	1.2e-17	46.36	root hair defective 6-like 4	[more]
AT5G43175.1	4.4e-17	59.15	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CsaV3_5G024030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C707\|BH083_ARATH	1.9e-41	67.97	Transcription factor bHLH83 OS=Arabidopsis thaliana OX=3702 GN=BHLH83 PE=1 SV=1	[more]
sp\|Q9FJ00\|BH086_ARATH	8.8e-39	45.93	Putative transcription factor bHLH086 OS=Arabidopsis thaliana OX=3702 GN=BHLH86 ...	[more]
sp\|Q7XHI9\|BH084_ARATH	9.4e-17	61.43	Transcription factor bHLH84 OS=Arabidopsis thaliana OX=3702 GN=BHLH84 PE=1 SV=1	[more]
sp\|Q84WK0\|BH085_ARATH	1.2e-16	61.43	Transcription factor bHLH85 OS=Arabidopsis thaliana OX=3702 GN=BHLH85 PE=2 SV=1	[more]
sp\|Q8LEG1\|BH054_ARATH	2.1e-16	46.36	Transcription factor bHLH54 OS=Arabidopsis thaliana OX=3702 GN=BHLH54 PE=2 SV=1	[more]

BLAST of CsaV3_5G024030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KN55\|A0A0A0KN55_CUCSA	1.6e-149	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G420280 PE=4 SV=1	[more]
tr\|A0A1S3CCR8\|A0A1S3CCR8_CUCME	2.2e-140	92.96	putative transcription factor bHLH086 OS=Cucumis melo OX=3656 GN=LOC103499318 PE...	[more]
tr\|A0A2I4EB43\|A0A2I4EB43_9ROSI	2.9e-55	50.46	putative transcription factor bHLH086 OS=Juglans regia OX=51240 GN=LOC108987995 ...	[more]
tr\|A0A1R3GBT5\|A0A1R3GBT5_COCAP	2.5e-54	51.16	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27201 PE=4 ...	[more]
tr\|B9T2K1\|B9T2K1_RICCO	1.6e-53	50.83	DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0285440 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G024030.1	CsaV3_5G024030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 193..242 e-value: 1.0E-11 score: 54.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 194..237 e-value: 4.2E-7 score: 29.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 187..236 score: 15.294
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 189..241 e-value: 1.19496E-11 score: 57.6091
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 178..237 e-value: 3.9E-11 score: 44.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 187..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..198
None	No IPR available	PANTHER	PTHR16223:SF19	TRANSCRIPTION FACTOR MEE8-RELATED	coord: 55..278
None	No IPR available	PANTHER	PTHR16223	FAMILY NOT NAMED	coord: 55..278

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G024030	CSPI05G14960	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G024030	Cucsa.006340	Cucumber (Gy14) v1	cgycucB072
CsaV3_5G024030	CmaCh04G022970	Cucurbita maxima (Rimu)	cmacucB0887
CsaV3_5G024030	CmaCh15G007400	Cucurbita maxima (Rimu)	cmacucB0343
CsaV3_5G024030	CmoCh15G007640	Cucurbita moschata (Rifu)	cmocucB0337
CsaV3_5G024030	CmoCh04G024010	Cucurbita moschata (Rifu)	cmocucB0876
CsaV3_5G024030	Cp4.1LG13g05200	Cucurbita pepo (Zucchini)	cpecucB0225
CsaV3_5G024030	Cp4.1LG01g20040	Cucurbita pepo (Zucchini)	cpecucB0545
CsaV3_5G024030	CsGy5G014810	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G024030	Carg18266	Silver-seed gourd	carcucB0564
CsaV3_5G024030	Cla019764	Watermelon (97103) v1	cucwmB407
CsaV3_5G024030	MELO3C022846	Melon (DHL92) v3.5.1	cucmeB351
CsaV3_5G024030	ClCG03G008680	Watermelon (Charleston Gray)	cucwcgB405
CsaV3_5G024030	Lsi09G009330	Bottle gourd (USVL1VR-Ls)	cuclsiB353
CsaV3_5G024030	MELO3C022846.2	Melon (DHL92) v3.6.1	cucmedB343
CsaV3_5G024030	Cla97C03G059930	Watermelon (97103) v2	cucwmbB386
CsaV3_5G024030	Bhi12G001071	Wax gourd	cucwgoB463

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G024030	Silver-seed gourd	carcucB0869