Cp4.1LG01g20040 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAACTGCCTCAGTCTCTCATCAACTTCAAGTGTGGGATTGATAACATTTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTGGTCAAGACACTTATAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCCACCAATGGTTATAGCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAGGCTGAAGGAGCTCACGAGATTGCCAATCAAAAGCGACCTCATATGGTATTGAATTTCAAAGTTCTTACCTTTTCTTTGCAACAAGTCCTCAATTTTTTTTTCGTTTTTGTTGAGAAATGTGAGATCTCGTATCCGATTGGGGAGGAGAACAAAACATTCTTTATAAGAGTGTGGAAACCTCTTCTTAGTAGACGCGTTTTAAAAACCTTGAAGAAAAGCCCGAAAGGTAAAATCAAAGAAGATAATATCTACTAGCAGTGGGCTTGAGCCGTTACAAATGGTATCAGAGCCAGACAACGGATGATGAGCCAGTGAGGAAGCTAAGCTCCGAAGAGGGGTGGACAAGAGGCGGTGTGCTAGCAAGCACACTGGGCCCTAAAGGAGGTGGATTGGAGTGTCACACATTGATTGGAGAAGGGAACGAGTGTCAGTGAGGACGCTGGCCCCCGAAAGAGGGTGGATCGTAAGATCCTACATCAGTTAGGGAGGAGAACAAAACATTTTTTATAAGAGTGTGGAAACCTCTCACTAACAGACCGTTTTAAAGAAAGACAAAAAAGAACAGGCTTGGGTCGTTACCGAAAACGTTTGAATTCCGAGCTAAATTACAAGTTTTTTTTATTTTGAAAGTTAGCTTTTGATTGATTGATTGACAGGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAACAGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGGTTTTAGTTTGTTTTTTTGACAACGTTGGCTTACAATTTAAGGAACAAATATTTTAAGGTTCTGAAAGAATGTCTGCTTTTGTCTTTGTTTTTATGTTTCTTAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGGTGCTTACTCTTATCTAATATAAAAAACATGTTCATATCTCAATCCGCCTCGGCAGATCTTCTTCTTAACTAGCTAATGTGAAACTCTAAAAATCTCTTCATCTTAAATAGTCATTTATCCGTCTAGCACTATCCCGTGTTAGCTCCTTTTCGTCAATCTAATACATCTCTTCCATGCATATTTCCTATGAACACACCTTTAAGGCTCACATGTCTATTTATTTGACACCCACCCAAGAATTCTATGTGAGATCTCACATCGGTTGTAGAGAGGAACAAAGTATTTTTTACCAGGGTACAAATATCTCCAAACCCAAAGAGAATAATATCTGCTGACGTGGGCTTAGGTGGTTATATTCTATTACTAAGTTATGGGTACGATTGTGATAGGCTAATAATTACTTGATATTGTACACATTGAGCATAAGCTCTCGTGATTTTGTTTTTTGGTTACCCAAAATGTTTTGTTCGAATGAAGATAGTGTCCCTAACTTCTATATCTATGATCTTTCTCGTGAAACGCTAATAATTTGTACTTGTTTGCAGGTTGATTTGGTAACGATGTTGGAAAAGGCAATTAGTTATGTAAAATTTCTTCAACTACAAGTGAAGGTACAAATTCCATATCACTCTGTTTCCAAATTTTGGATAAAGATCCTTCCCTTGTTGGCTCTGATATCATAGTAAAAATTTTGAATATCAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGA ATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAACTGCCTCAGTCTCTCATCAACTTCAAGTGTGGGATTGATAACATTTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTGGTCAAGACACTTATAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCCACCAATGGTTATAGCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAGGCTGAAGGAGCTCACGAGATTGCCAATCAAAAGCGACCTCATATGGTATTGAATTTCAAAGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAACAGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGA ATGGCACTTGCAAACTCATCTGTACATGAAGCCGATGGCATGGACAAAGCTGGTGGATATATCAAGTCTATACCCATTGCTACCCATGACACTCCAAATGCTACCTTTCTCTTTCGAAACACGACGAATTACCAACTCGATCACCATCAGCAGCAGCAGCAACTGCCTCAGTCTCTCATCAACTTCAAGTGTGGGATTGATAACATTTTCCATAAGAACAATGAATCTTTGCTGAGCTTTGAGCCACAAGGGGTTGGTCAAGACACTTATAATTGGGATGATCACCAGCGTTTGATGGAAGATCCCAATTGCTTTCAAACAGCCACCAATGGTTATAGCTCTCCAAAAGAGAACAAAAATGGTGATGGGTCTGTGTATGATTGGCTTTACTCTGAAGCAAGTGGTGTTTCTGATGCCATTCAGGAGGCTGAAGGAGCTCACGAGATTGCCAATCAAAAGCGACCTCATATGGTATTGAATTTCAAAGGAGAGAGCAGTGGGAGTGTTAGTAAGAAGCAATGCACAACAGTTGCAGCTAAGAAACAGAAACCCAAATCATCAACAGCAAAGGATCCACAGAGCATTGCAGCCAAGAATCGACGAGAGAGGATTAGCGAGCGGCTGAAGATACTTCAAGAATTGGTTCCCAATGGCTCCAAGATCCTAGCTACGGATGAGTTTTGGCCAGTTCAAGGTGGGAAAGCTCCTGATATATCACAAGTTAAGGAAGCCATTGATGCTATTCTTTCATCTCAAAGAGAAAGAAGTTCAAGCTCAAACAGTCAAAAATGA MALANSSVHEADGMDKAGGYIKSIPIATHDTPNATFLFRNTTNYQLDHHQQQQQLPQSLINFKCGIDNIFHKNNESLLSFEPQGVGQDTYNWDDHQRLMEDPNCFQTATNGYSSPKENKNGDGSVYDWLYSEASGVSDAIQEAEGAHEIANQKRPHMVLNFKGESSGSVSKKQCTTVAAKKQKPKSSTAKDPQSIAAKNRRERISERLKILQELVPNGSKILATDEFWPVQGGKAPDISQVKEAIDAILSSQRERSSSSNSQK
BLAST of Cp4.1LG01g20040 vs. Swiss-Prot
Match: BH086_ARATH (Putative transcription factor bHLH086 OS=Arabidopsis thaliana GN=BHLH86 PE=3 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 5.7e-29 Identity = 113/291 (38.83%), Postives = 153/291 (52.58%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. Swiss-Prot
Match: BH083_ARATH (Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.5e-26 Identity = 98/252 (38.89%), Postives = 129/252 (51.19%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TrEMBL
Match: A0A0A0KN55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G420280 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 8.5e-80 Identity = 196/301 (65.12%), Postives = 212/301 (70.43%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TrEMBL
Match: V4SXU2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013420mg PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.6e-46 Identity = 137/286 (47.90%), Postives = 169/286 (59.09%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TrEMBL
Match: A0A067FAC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038918mg PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 3.6e-46 Identity = 136/286 (47.55%), Postives = 169/286 (59.09%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TrEMBL
Match: A0A061EH34_THECC (Rhd six-like 1, putative OS=Theobroma cacao GN=TCM_019210 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 5.7e-44 Identity = 137/308 (44.48%), Postives = 174/308 (56.49%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TrEMBL
Match: B9T2K1_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0285440 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.8e-42 Identity = 127/260 (48.85%), Postives = 154/260 (59.23%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TAIR10
Match: AT5G37800.1 (AT5G37800.1 RHD SIX-LIKE 1) HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30 Identity = 113/291 (38.83%), Postives = 153/291 (52.58%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TAIR10
Match: AT1G66470.1 (AT1G66470.1 ROOT HAIR DEFECTIVE6) HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27 Identity = 98/252 (38.89%), Postives = 129/252 (51.19%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TAIR10
Match: AT3G50330.1 (AT3G50330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06 Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TAIR10
Match: AT5G67060.1 (AT5G67060.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06 Identity = 23/33 (69.70%), Postives = 31/33 (93.94%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. TAIR10
Match: AT4G33880.1 (AT4G33880.1 ROOT HAIR DEFECTIVE 6-LIKE 2) HSP 1 Score: 49.3 bits (116), Expect = 4.2e-06 Identity = 39/116 (33.62%), Postives = 54/116 (46.55%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. NCBI nr
Match: gi|449445206|ref|XP_004140364.1| (PREDICTED: putative transcription factor bHLH086 [Cucumis sativus]) HSP 1 Score: 305.1 bits (780), Expect = 1.2e-79 Identity = 196/301 (65.12%), Postives = 212/301 (70.43%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. NCBI nr
Match: gi|659121136|ref|XP_008460515.1| (PREDICTED: putative transcription factor bHLH086 [Cucumis melo]) HSP 1 Score: 292.4 bits (747), Expect = 8.2e-76 Identity = 190/299 (63.55%), Postives = 211/299 (70.57%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. NCBI nr
Match: gi|567876091|ref|XP_006430635.1| (hypothetical protein CICLE_v10013420mg [Citrus clementina]) HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46 Identity = 137/286 (47.90%), Postives = 169/286 (59.09%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. NCBI nr
Match: gi|641844201|gb|KDO63095.1| (hypothetical protein CISIN_1g038918mg [Citrus sinensis]) HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46 Identity = 136/286 (47.55%), Postives = 169/286 (59.09%), Query Frame = 1
BLAST of Cp4.1LG01g20040 vs. NCBI nr
Match: gi|568857667|ref|XP_006482386.1| (PREDICTED: transcription factor bHLH83-like [Citrus sinensis]) HSP 1 Score: 192.2 bits (487), Expect = 1.1e-45 Identity = 134/286 (46.85%), Postives = 169/286 (59.09%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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