CsaV3_4G028010 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G028010
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MADS-box transcription factor
Location	chr4 : 17399610 .. 17406194 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGTTGTCACAAACCCAAAAAAAAGGCCTATTTTTGTGTAAGAAATAGAAAGTTTATGAACATGAAAACCCAATATAGAATGGTCCTTTTATTTTAAAGAACCCATGTTTGTTGAATTTTTAATTAGAGCATTTGAAAAGAAGAAAAGAGAGAAAGAAAATGGGAAGAGGGAAAATAGAAATAAAAAGAATAGAGAACTCAAGCAATAGACAAGTTACATATTCAAAGAGAAGAAATGGTATCATCAAAAAAGCCAAAGAAATTACTGTTCTTTGCGATGCTCAAGTTTCTCTTGTCATTTTTGCTAGCTCTGGAAAAATGCATGAATATTGCAGCCCTTCTACACCGTAAGAAATTTTATTTTTCTCTCTTTTTTCTTATATAATTTTTTAAAATTTTGTTATTAATTAATCTGATTTCTTATCTTTTTTTTCTTTTTCTTTTTGGGAATGATAATTTTAGTTTGGTTGATATCTTGGATAAGTATCACAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGGTTTTATTTATTTATTTTTGTTTATATTTTCTCTCGAATTTTCTCCCTCGTATGAAATTTTAGATCTAAGTTTCTTCTTCTTCTTCTTTGGATATGTGAGAAATGAAACCCTAAAAGAAAGTATATATATATATATATATATAACATGATAGATTTCTTTCCTTTTTTTTTTTTTTTTAATATATACTGTCTCTCTAATTTTCTCCCTCATGTGAAATTTTAGATCTACGCTTTTTTTTCTTGGATCTTGGTTTTTTATTATACATACATACATATATATATATATATATATATATAAGAAATATGGTGGGTTTTTTTAAAAAATAAATTTGTTGCCAAAAATATGTTAGAAAAGTTTGGGGTTTGAAATCCTATGAACTGATCTAGAAATGGGATACGAATGATTTTATAAAATAAAATAAAATAAAAAATTCTATTTTTTTTTTCTTTTAAGATTTATGTGTTGTGATGGTTTGTGAAAATTTAGCATGAAAAGGGAAAGTTGAAACTAAGAGAAATGTAACATCCATGAACAGATCTATTAACATAAATTATGCTTTCTTTCTTTCTTTCTTCCTTTTTTTTTTTCTTTTTGGAAGAATAATAAGATTATGTTTTGGTTTGTTTATGTGTTTTTCAGCTGGAAAAAAAAAGTCACTTGGCAGTTTCATACTTGTAGATCTATTGCCAATAGAAAGAAAATATTTTATTGTTTTAAAAAAAGAAAAATATGAACCCTAATTTGGTATTGACTATACTATCAAGGTAAGTTGAAGTTGGTTGAAGTTGGTGGTTCAAATTTTCACATTCTACAACTATCCTTGTCAATTTTTTTTGTCCATCTTTTAGCTTGAAGATGTTTTGTTCTTTTATGTACAATGACATACGGACTTTGAGATTTAAACTTTTGAGAAAATAACTAGAATGTGTAGATTAGTATCGATGAGTTGGCGTTGAATCAAGATAAGTAGTTTAACACTTCTAAATTAGTTTTTTTTTTAATAGTGTGTTTGGTTATTTGATATATTAATAATTTTACAGAATCTGAGCAATGAAATGGATAGAGTTAAGAAAGAGAATGACAACATGCAGATTGAGCTAAGGTATATATATTTGGATTCTTTTTTGAAAAAATTATAAAGAAAAATTCTTCTCTGGATATCATTAATTGGATATGTGTATATATATATATATATATATATATATATATATATATATATTCATGAAAAGAGAATAATGAGAAAATGAGAAAATAAAAACAGGCATTTGAGAGGAGAAGATATAACGTCTTTGAACTACAAGGAGTTAATGGCTCTCGAAGAAGCTCTTGAAAATGGCCTCACCGGTGTTCGTGAGAAGCAGGTTTTTCCTTTTTCCTTTTTCCTTTTTCTAAAATAATTATATGCAAAACTTCATCTATCAATAGTAACACAATTCTATTTGTGATATTCATACACACCACAAAAATCTACCGGTAATATAATATCTTTCATCAATAAAATCTGAAATTTTATTGTATTTTATAAATATATTTTGGAAGTAGGCGTGATTTACGTAATAATTTAACTCGATATATATATATATATATGTATATGATAAGATGAATATTAATTAAATTTTTGTTTGGTTTTGTGGTTGCAGTCGGAATTCATGAAAATGATGAGAACAAATGTACGTATATATATCTTTACTCTCTTTTTTTTCTCCATTCATCACATTGTATTTTCTTTTATCGCTTAGTTAATTCAAAGAGAATGTTAGAAAGAAAAAAAAAAGAGTAAGTTTTATTACCTAATAGAGTTTTTTAATTGGAATACCGTTGAACCTCTATCAGTATCTCATACACGACGTTTTGGTTATAAATTATTAGAATATAATTTTTTTTCTATATTTTTAGTTTTGTCATTTATCATTTTTTCTAAAAAGAAAAACTGGTTTCTTTCTTTTTTTTTTTTTACTAGAATTTGTAATTATCTAAGAAAAGAAAAGAAAATTGTGGTTTAAAGTGGCTCTAAAATCTGTTTACTTTTTTTTTAAAAAAAAGAAATTAGTTTAGATTGTTTTTAAAAATTTGCCAAAGATTTTAAAAGTATTATTGTGAGTACTTTGATCGTGAGAAAAATATCTAATGCATTGAAAGATTGTTTATTTTCGTTTTTTGATTTTCTGTTTCTGTTTTTCTAGAATCGTTTCTATAAATTTTGAAAATTACAGAATCTCTCTGTTTGTTTTTTTCTATCATAAACATTAATATAACTTAATTGTATCATTCATTATCAAAAATAATTTTTTATTTAAAATATGTATTTTTTAAAAAAGAAAATTCAACAAAGTAAGAAAGAATTAAAAAGATTAGTTTTTAGATGAATTAGTTGTGTTGGGCAATTAAATTAAACATTGTGTTTAGAATATACTAATGATATTGTAGTGAAATAAATAATGTTGTTGAGTTTTGGATATTTAATAATATAGGAAAGAATGATGGAAGAAGAGAACAAGCGCCTTAACTATGAGCTGGTAAAATCATTTTACACTCTTTCTTCATAATTCAACTTTTAGTTGTACATATAATATTTAACTATAACCAATAACAAGTCCACCTATTTACAATTATATAATAAATTTTTTTTATCTATAGGATAAATATTTATTATTTAACATAAAGTAGACATTTTTTTTTTTGAAGTATAATACTTTTCAAGATTTTCAAAAATATAATTAAAACATACTAAACAACAACTTATGAATATTTAAATTTAGTTTAAAGTATTATTTTGGTTATAAAAATATCTAAATTTTGTTAGAAGTTTTTTTAGGGAAGGCAACTTTTAATTTTAGCTCAAAGGTAAAATATAAGGTTTAAAATGTATCATTTTGCATTGAAACTTTGAACATCTTATTACTAATTATTTATTTTATCTCATTTTTCATTCCATTAAAAAAGTTTGCACCATGTTTGCATTTCATTTAACTTTTTAATACGTATTAGTCATAAAACAGATTTTTTAGTACAATAGGAAAAGAGAAATTTAAACACGTACCTCTTTGTTAACATATTTAGAAGTCGATTTAGTTATGTTTGTTTTAAGTAAAACGTTTAAGTATTTAAATCAATTATATATACATTACATGCAGTACCAAAAGGAGATGGTTGCAATGGGAGATAGTGTGAGAGAAATGGATATTGGATATAATCAAAGAATGAGAGATTTCAATTCTCAAATGCCTTTTGCTTTCAGAGTTCAGCCTATTCAGCCAAATCTACAAGAAAGGGAATAATTAATCATATTTTATATCTATTTCTCTCTTTATGTTTATGCTATTGGGAGTCTTAAAACTTTTTTTAATATAATCTCTAGACTTTTAAATTATGTGTACAAACTTTGGGTTATGTGTGTTATGTTATTATGTACTGTTATGATGAGAACTTCAATCACTGTTAAGCTAATGTTATGTAGTTTTAATATATACTATATTTTGTGTGATGTGAACGAAATATGTGTTTGTCAATGTTTTATACTATCATGATTGGTTTTGAAGATGACTAAAGTGATTTCTAATTCATTCAAAATCGATTTAAAACATTTTAAGGTAAAAGTTTATAAGTTGAGACATAAATTGATGCTCTGCAGTTGTACTCGAAAAATAAAAATGTAATAGCACACTGACTTATTATTAAATACCATTTGGGAAATCCAAAATCAAGATTCAACCTCCAATCCTCTGTCCAATAAGAAATAAAAATGAGAATCACAATACAACACACATTTTATGAAACAAAACAAAAAAAGGGAGGTAAAAAAATGGCAACAAATAGATAGATACACTTACCCTTTCACCCCAATAGCTTCTCCCTCATGTACAAAAATACAAATAAACTTTTATGACTATAATTATTTTTCCATCAATATCTTCTCAGCAAGGTTCTGATATGAACAAAGCACCAAGTTTTCAGAAGTGTTTTATGCTTTCTCCATCCCTTGAAATACTTTCCAATTACCTTCTTGTAGCTTGGCCTCTGCTGCACCAATATCCAATACTCTGAAATGTTTGGTCTGCTGCCTATATACTCATCTGCCAGCTTCAACAGCTCGAGTCGAGCCAGCACTGGAATGAATACGGCATCAGCCATGGTGAACTCTTCCCCTGCTATGTAAGAAGTCTCGCTTAGTTTCAATTCGATTTCATCGAGAAGTGCAACTAGATGATCAGTGCTTTGTTTGACAACAGATTTGTTTTTCAATTTGTCTTCAGTCTCGTATGCTTCTCTGAGCTTACGATGGTAAGCAGCAGCCATTTCGGGAGTTTCTGCCATCCGAGAGATCACCACTCGCCTTATAAATCTGGTGACAGTAAGACGGTACTTTTCAGGGATATGGGCAAGAGTGAAATATTTTGGATTCCATTCTTGTATCTTATGCATCCATTCAACAACTTCCCTGCTACTTGGCATTATCTCGTCGGTCCCTGAGGAGACAACTGCAATTCTCTCTATATACCTGAACAGATTTGTGACATCCATATATTAGCCGGTTCTTGACTACATCGGCCACTGAGGAGGTGTTTAGCAGCAGCTAGTTTTACAGTTTTATTTTTCTGATAACATGTGAGGTGAGAGAATCGAATCTCTAACCTCAAGGTTGATAGTACAAGTTTTATGATAGTTTTACTATGTTTATTTTGACAATAGTTTTACAGTTATTTGGATAATGGTTTTTAGAAATTGACAAAAAACTATTGTACAATGTCTTCAATTGTTAATTCTTTGGTGATATCTTCAATTGTTCTGAAAAAAAAAAACAGACCACTAGAAGAACCTAATGAAGTGAGTTAACCTAAGAAACAAAACTACAACAAGTAATTCATATTATTTCCACTTACTTTTATTTATACAACCACAACCTTTCGAGTCAACCTAATGAAGTTAGTTATTCCAGCTAATCTCATGAAGCATATGGAAATTGCATGAAAAAGGTAAGATTTAAGAACAAAGGACTAAGAAGGAACACATACTGAATTATCTCAATTGTGTCGAAAATAATGTGGGAACCATTTTGAAATACGGGAAGTTTAGCACTTGGGTTGATCTTGAAGAATGAGGAGTCCATGTTCTTGGCCGTGATGGGATTGACATGATACGACGTGTAATCAATGCTCTGCTCTTCCAAGGCAAGTCTCACCTTCTGGCTATCCAAAGAGTAAGGATGATGATATAACTGCATTGCTTAGTTACTAACATCAGCTTTATTTGTGAAATTTCAAGACAGTACTTGAATAATGCCTCTTGGTTTATGGCTTAGCAAATCACACCGAATCCACAGGAAAAGGTTAAGCTAAAACCCTACAATGACAGTAAGAGAATATAATCATCATCAACCACGATTTTCAAAAAGAAAAATCGATTTGCCAAAAAAGAAAAACAATGAAAATCAGATGAGGAATTCATGGAGTCATGGATCAATGAAGTTCCAATCCACAGACACAAAAGGAAACTGATACACTAAGAAGCAAAAAGAAACCAAAGCCTGATATCAATTTTTAGAATCGGGATGTCAATTTTTGAAAAATATTCAACACCAGAACTCTTCAATAAGAAAAACATATTACTCTTTCAGTTTTAATTGTACAATGGGAACAGAAACAACTATTTCATGGTGACACCCAAAACCTGTAGAAGGTCAAGTCCCAGTAATAATATAATCCTATTTACTGTGGTAAATTAAGTATGAAAACTCAAATCAAGTAGTTCATTAAAAAATAGTTATAGTTGTATGGAGCTCCATCCACTAAGTGTAATCTACAACTATAGGATTATATAACACAAATACAGAAAGCCCCGAAAAGGTATTAAGAAAATATCCATTATATTATTAACTGAAAGTACCAAAGGTTGGCAAAATTTTCTTCAAGTATGTTAATTGTTAACAACAAAATTTAAAGCAATGACGAGTATGTGGGGAAAAAAGTTAAATAAAAGCTTTCTGCTAAATCGACAATAAACCCAAAGGCTTAAGCTGATAAGTTACTATACATTAGATTATATCAACACTTGTA

mRNA sequence

ATGGGAAGAGGGAAAATAGAAATAAAAAGAATAGAGAACTCAAGCAATAGACAAGTTACATATTCAAAGAGAAGAAATGGTATCATCAAAAAAGCCAAAGAAATTACTGTTCTTTGCGATGCTCAAGTTTCTCTTGTCATTTTTGCTAGCTCTGGAAAAATGCATGAATATTGCAGCCCTTCTACACCTTTGGTTGATATCTTGGATAAGTATCACAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGAATCTGAGCAATGAAATGGATAGAGTTAAGAAAGAGAATGACAACATGCAGATTGAGCTAAGGCATTTGAGAGGAGAAGATATAACGTCTTTGAACTACAAGGAGTTAATGGCTCTCGAAGAAGCTCTTGAAAATGGCCTCACCGGTGTTCGTGAGAAGCAGTCGGAATTCATGAAAATGATGAGAACAAATGAAAGAATGATGGAAGAAGAGAACAAGCGCCTTAACTATGAGCTGTACCAAAAGGAGATGGTTGCAATGGGAGATAGTGTGAGAGAAATGGATATTGGATATAATCAAAGAATGAGAGATTTCAATTCTCAAATGCCTTTTGCTTTCAGAGTTCAGCCTATTCAGCCAAATCTACAAGAAAGGGAATAA

Coding sequence (CDS)

ATGGGAAGAGGGAAAATAGAAATAAAAAGAATAGAGAACTCAAGCAATAGACAAGTTACATATTCAAAGAGAAGAAATGGTATCATCAAAAAAGCCAAAGAAATTACTGTTCTTTGCGATGCTCAAGTTTCTCTTGTCATTTTTGCTAGCTCTGGAAAAATGCATGAATATTGCAGCCCTTCTACACCTTTGGTTGATATCTTGGATAAGTATCACAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGAATCTGAGCAATGAAATGGATAGAGTTAAGAAAGAGAATGACAACATGCAGATTGAGCTAAGGCATTTGAGAGGAGAAGATATAACGTCTTTGAACTACAAGGAGTTAATGGCTCTCGAAGAAGCTCTTGAAAATGGCCTCACCGGTGTTCGTGAGAAGCAGTCGGAATTCATGAAAATGATGAGAACAAATGAAAGAATGATGGAAGAAGAGAACAAGCGCCTTAACTATGAGCTGTACCAAAAGGAGATGGTTGCAATGGGAGATAGTGTGAGAGAAATGGATATTGGATATAATCAAAGAATGAGAGATTTCAATTCTCAAATGCCTTTTGCTTTCAGAGTTCAGCCTATTCAGCCAAATCTACAAGAAAGGGAATAA

Protein sequence

MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSPSTPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKELMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMDIGYNQRMRDFNSQMPFAFRVQPIQPNLQERE

Homology

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BLAST of CsaV3_4G028010 vs. NCBI nr
Match: NP_001292651.1 (floral homeotic protein PMADS 2 [Cucumis sativus] >AAD02250.1 MADS box protein 26 [Cucumis sativus])

HSP 1 Score: 412.1 bits (1058), Expect = 1.1e-111
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 212
           IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 211

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BLAST of CsaV3_4G028010 vs. NCBI nr
Match: XP_008444207.1 (PREDICTED: floral homeotic protein PMADS 2 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 1.6e-110
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM+LEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 217

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 212
           IGYNQRMRDFNSQMPFAFRVQPIQPN QERE
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQERE 248

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BLAST of CsaV3_4G028010 vs. NCBI nr
Match: XP_022154226.1 (floral homeotic protein PMADS 2 [Momordica charantia])

HSP 1 Score: 404.1 bits (1037), Expect = 3.0e-109
Identity = 206/210 (98.10%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMALEEALENGLTGVREKQSEF+KMMRTNERMMEEENKRLNYELYQKEMVAMG+SVREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFIKMMRTNERMMEEENKRLNYELYQKEMVAMGESVREMD 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

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BLAST of CsaV3_4G028010 vs. NCBI nr
Match: XP_022936488.1 (floral homeotic protein PMADS 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 401.4 bits (1030), Expect = 2.0e-108
Identity = 205/210 (97.62%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMALEEALENGLTGVREKQSE MKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD
Sbjct: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

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BLAST of CsaV3_4G028010 vs. NCBI nr
Match: XP_022976853.1 (floral homeotic protein PMADS 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 2.4e-106
Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMALEEALENGLTGVREKQSE MKMMRTNERMMEEE KRLNYELYQKEMVAMGDSVREMD
Sbjct: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEETKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 IGY-NQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GY NQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 NGYNNQRMRDFNSQMPFAFRVQPIQPNLQER 211

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BLAST of CsaV3_4G028010 vs. TAIR10
Match: AT5G20240.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 248.1 bits (632), Expect = 5.0e-66
Identity = 132/210 (62.86%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA+V+L+IFAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELRHL+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMA+E A+E+GL  VR+ Q E +   R NE+MM EE ++L ++L Q+EM A+  + R M 
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEM-AIASNARGM- 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
                 MRD + Q  F +RVQPIQPNLQE+
Sbjct: 181 -----MMRDHDGQ--FGYRVQPIQPNLQEK 201

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BLAST of CsaV3_4G028010 vs. TAIR10
Match: AT5G23260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 132.1 bits (331), Expect = 4.0e-31
Identity = 71/172 (41.28%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIK+IEN + RQVT+SKRR G+IKK +E+++LCDA + L++F+++GK+ E+CS 
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  STPLVDILDKYHKQSGKRLWD--AKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNY 120
              +  ++D+Y   +G RL D     E L +EM+ +++E  N+++ LR   G D+ S+  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPP 120

Query: 121 KELMALEEALENGLTGVREKQSEFMKMMRTN----ERMMEEENKRLNYELYQ 167
            EL  LE  LE+ +  VRE+++E M+    N     RM+EE+N  +   L++
Sbjct: 121 NELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172

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BLAST of CsaV3_4G028010 vs. TAIR10
Match: AT3G54340.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29
Identity = 69/168 (41.07%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           M RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E+TVLCDA+VS+++F+SS K+HEY SP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           +T   +I+D Y   S   +W  ++E +     ++ + N N++ +++   GE +  L+ +E
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120

Query: 121 LMALEEALENGLTGVREKQSEFM----KMMRTNERMMEEENKRLNYEL 165
           L  LE+ +EN    VRE++ + +    +  +   +  ++  K L +EL
Sbjct: 121 LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHEL 168

[Close]

BLAST of CsaV3_4G028010 vs. TAIR10
Match: AT5G15800.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-27
Identity = 75/173 (43.35%), Postives = 115/173 (66.47%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA+V+L+IF++ GK++E+CS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 60

Query: 61  STPLVDILDKYHKQSGKRL----WDAKH-ENLSNEMDRVKKENDNMQIELRHLRGEDITS 120
           S+ ++  LD+Y K S   +      AK  EN   E  ++K   +N+Q + R+L GED+  
Sbjct: 61  SSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LNYKELMALEEALENGLTGVREKQSEFM----KMMRTNERMMEEENKRLNYEL 165
           LN KEL  LE  L+  L  VR  ++++M      ++  E+M+ E N+ L  +L
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172

[Close]

BLAST of CsaV3_4G028010 vs. TAIR10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27
Identity = 72/176 (40.91%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA+V+L+IF++ GK++E+CS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 60

Query: 61  STPLVDILDKYHK------QSGKRLWDAKHENLSNEMD--RVKKENDNMQIELRHLRGED 120
           S+ ++  L++Y K      +      +A    LS++ +  ++K+  D +Q   R+L GED
Sbjct: 61  SSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGED 120

Query: 121 ITSLNYKELMALEEALENGLTGVREKQSEFM----KMMRTNERMMEEENKRLNYEL 165
           +  L+ KEL +LE  L++ L  +R  +++FM      +++ ERM+ E NK L   L
Sbjct: 121 LGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL 175

[Close]

BLAST of CsaV3_4G028010 vs. Swiss-Prot
Match: sp|Q07474|MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida OX=4102 GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-81
Identity = 153/211 (72.51%), Postives = 183/211 (86.73%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA+VSL+IF +SGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST L D+LD Y K SG+RLWDAKHENLSNE+DR+KKENDNMQ++LRHL+GEDI SLN+KE
Sbjct: 61  STTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM LEE L NGL+ +  KQSE ++M+R N++++EEE+K+L Y L+QKEM AMG ++R ++
Sbjct: 121 LMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQKEMAAMGGNMRMIE 180

Query: 181 IGYNQRMRDFN-SQMPFAFRVQPIQPNLQER 211
             Y+QR RD+   QMPFA RVQP+QPNL ER
Sbjct: 181 EVYHQRDRDYEYQQMPFALRVQPMQPNLHER 211

[Close]

BLAST of CsaV3_4G028010 vs. Swiss-Prot
Match: sp|Q03378|GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus OX=4151 GN=GLO PE=1 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 4.9e-79
Identity = 150/214 (70.09%), Postives = 181/214 (84.58%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA VS++IFASSGKMHE+CSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVD+LD YHK SGKRLWD KHE+L NE++RVKKEND+MQIELRHL+GEDIT+LNYKE
Sbjct: 61  STTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVRE-- 180
           LM LE+ALENG + ++ KQ EF++MMR +  M+EEEN+ L ++L Q  +  M D+V E  
Sbjct: 121 LMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEENQSLQFKLRQMHLDPMNDNVMESQ 180

Query: 181 --MDIGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
              D  ++Q + D+ +QMPFAFRVQP+QPNLQER
Sbjct: 181 AVYDHHHHQNIADYEAQMPFAFRVQPMQPNLQER 214

[Close]

BLAST of CsaV3_4G028010 vs. Swiss-Prot
Match: sp|Q03416|GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum OX=4097 GN=GLO PE=2 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.3e-76
Identity = 144/210 (68.57%), Postives = 182/210 (86.67%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA+VS++IFASSGKMHE+   
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--S 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVDILD+YHK +G+RLWDAKHENL NE+++VKK+NDNMQIELRHL+GEDITSLN++E
Sbjct: 61  STSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM LE+AL+NGLT +R KQ++ ++MMR   + MEEE  +LN++L Q E+ +M  ++ E+ 
Sbjct: 121 LMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQLEIASMNRNMGEIG 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
             ++QR  ++ +QMPFAFRVQP+QPNLQER
Sbjct: 181 EVFHQRENEYQTQMPFAFRVQPMQPNLQER 208

[Close]

BLAST of CsaV3_4G028010 vs. Swiss-Prot
Match: sp|Q03488|FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida OX=4102 GN=FBP1 PE=2 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.1e-73
Identity = 145/211 (68.72%), Postives = 177/211 (83.89%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA+VS++IFASSGKMHE+   
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--S 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVDILD+YHK +G+RL DAKHENL NE+++VKK+NDNMQIELRHL+GEDITSLN++E
Sbjct: 61  STSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM LE+ALENGLT +R KQ+E ++MMR   + MEEE  +LN +L Q E+  M  ++ E+ 
Sbjct: 121 LMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQLEIATMNRNMGEIG 180

Query: 181 IGYNQR-MRDFNSQMPFAFRVQPIQPNLQER 211
             + QR   D+ + MPFAFRVQP+QPNLQER
Sbjct: 181 EVFQQRENHDYQNHMPFAFRVQPMQPNLQER 209

[Close]

BLAST of CsaV3_4G028010 vs. Swiss-Prot
Match: sp|P48007|PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana OX=3702 GN=PI PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.0e-65
Identity = 132/210 (62.86%), Postives = 167/210 (79.52%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA+V+L+IFAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELRHL+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMA+E A+E+GL  VR+ Q E +   R NE+MM EE ++L ++L Q+EM A+  + R M 
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEM-AIASNARGM- 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
                 MRD + Q  F +RVQPIQPNLQE+
Sbjct: 181 -----MMRDHDGQ--FGYRVQPIQPNLQEK 201

[Close]

BLAST of CsaV3_4G028010 vs. TrEMBL
Match: tr|Q9ZTQ9|Q9ZTQ9_CUCSA (MADS box protein 26 OS=Cucumis sativus OX=3659 GN=CUM26 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 7.3e-112
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 212
           IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 211

[Close]

BLAST of CsaV3_4G028010 vs. TrEMBL
Match: tr|A0A1S3B9U1|A0A1S3B9U1_CUCME (floral homeotic protein PMADS 2 OS=Cucumis melo OX=3656 GN=LOC103487614 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 1.1e-110
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM+LEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 217

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQERE 212
           IGYNQRMRDFNSQMPFAFRVQPIQPN QERE
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQERE 248

[Close]

BLAST of CsaV3_4G028010 vs. TrEMBL
Match: tr|A0A0P0IP59|A0A0P0IP59_MERAN (Pistillata OS=Mercurialis annua OX=3986 GN=PI PE=2 SV=2)

HSP 1 Score: 336.3 bits (861), Expect = 5.1e-89
Identity = 173/211 (81.99%), Postives = 197/211 (93.36%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDAQVSLVIFA+SGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFATSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVD+LDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRH++G+DITSL++KE
Sbjct: 61  STTLVDMLDKYHKQSGKRLWDAKHENLSNEIDRVKKENDNMQIELRHMKGDDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LM LEEALENGL GVR+KQ E+ K M+ NE+M+E+ENKRL++ L Q+EM AM ++VREM+
Sbjct: 121 LMGLEEALENGLAGVRDKQMEYYKTMKKNEKMLEDENKRLSFILQQQEM-AMEENVREME 180

Query: 181 IGYN-QRMRDFNSQMPFAFRVQPIQPNLQER 211
             Y+ QR+RD+NSQMPFAFRVQPIQPNLQER
Sbjct: 181 NPYHQQRVRDYNSQMPFAFRVQPIQPNLQER 210

[Close]

BLAST of CsaV3_4G028010 vs. TrEMBL
Match: tr|F1BWT4|F1BWT4_9ERIC (MADS domain transcription factor OS=Camellia japonica OX=4443 GN=GLO1 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.7e-89
Identity = 172/210 (81.90%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVDILDKYHKQSG+RLWDAKHENLSNE+DR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMA+EEALENGL  VREKQ E++ MM  N++ +EEENK LN+ L+Q+EM    +S REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFMLHQQEMNM--ESSREME 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GY+QR+RDF SQMPFAFRVQPIQPNLQER
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQER 208

[Close]

BLAST of CsaV3_4G028010 vs. TrEMBL
Match: tr|A0A0C5BV63|A0A0C5BV63_9ERIC (MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera OX=385388 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 172/210 (81.90%), Postives = 193/210 (91.90%), Query Frame = 0


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDAQVSLVIFASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           ST LVDILDKYHKQSG+RLWDAKHENLSNE+DR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180
           LMA+EEALENGL  VREKQ E++ MM  N++ +EEENK LN+ L+Q+EM    +S REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFILHQQEMNM--ESSREME 180

Query: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GY+QR+RDF SQMPFAFRVQPIQPNLQER
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQER 208

The following BLAST results are available for this feature:

BLAST of CsaV3_4G028010 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001292651.1	1.1e-111	100.00	floral homeotic protein PMADS 2 [Cucumis sativus] >AAD02250.1 MADS box protein 2...	[more]
XP_008444207.1	1.6e-110	99.05	PREDICTED: floral homeotic protein PMADS 2 [Cucumis melo]	[more]
XP_022154226.1	3.0e-109	98.10	floral homeotic protein PMADS 2 [Momordica charantia]	[more]
XP_022936488.1	2.0e-108	97.62	floral homeotic protein PMADS 2-like isoform X1 [Cucurbita moschata]	[more]
XP_022976853.1	2.4e-106	96.68	floral homeotic protein PMADS 2-like isoform X1 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G028010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20240.1	5.0e-66	62.86	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.2	4.0e-31	41.28	K-box region and MADS-box transcription factor family protein	[more]
AT3G54340.1	1.3e-29	41.07	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	1.2e-27	43.35	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	3.5e-27	40.91	K-box region and MADS-box transcription factor family protein	[more]

BLAST of CsaV3_4G028010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q07474\|MADS2_PETHY	1.1e-81	72.51	Floral homeotic protein PMADS 2 OS=Petunia hybrida OX=4102 GN=PMADS2 PE=2 SV=1	[more]
sp\|Q03378\|GLOB_ANTMA	4.9e-79	70.09	Floral homeotic protein GLOBOSA OS=Antirrhinum majus OX=4151 GN=GLO PE=1 SV=1	[more]
sp\|Q03416\|GLOB_TOBAC	2.3e-76	68.57	Floral homeotic protein GLOBOSA OS=Nicotiana tabacum OX=4097 GN=GLO PE=2 SV=1	[more]
sp\|Q03488\|FBP1_PETHY	3.1e-73	68.72	Floral homeotic protein FBP1 OS=Petunia hybrida OX=4102 GN=FBP1 PE=2 SV=1	[more]
sp\|P48007\|PIST_ARATH	9.0e-65	62.86	Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana OX=3702 GN=PI PE=1 SV...	[more]

BLAST of CsaV3_4G028010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|Q9ZTQ9\|Q9ZTQ9_CUCSA	7.3e-112	100.00	MADS box protein 26 OS=Cucumis sativus OX=3659 GN=CUM26 PE=2 SV=1	[more]
tr\|A0A1S3B9U1\|A0A1S3B9U1_CUCME	1.1e-110	99.05	floral homeotic protein PMADS 2 OS=Cucumis melo OX=3656 GN=LOC103487614 PE=4 SV=...	[more]
tr\|A0A0P0IP59\|A0A0P0IP59_MERAN	5.1e-89	81.99	Pistillata OS=Mercurialis annua OX=3986 GN=PI PE=2 SV=2	[more]
tr\|F1BWT4\|F1BWT4_9ERIC	8.7e-89	81.90	MADS domain transcription factor OS=Camellia japonica OX=4443 GN=GLO1 PE=2 SV=1	[more]
tr\|A0A0C5BV63\|A0A0C5BV63_9ERIC	1.1e-88	81.90	MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045944	positive regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR033896	MADS_MEF2-like
IPR036879	TF_MADSbox_sf
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G028010.1	CsaV3_4G028010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..111
None	No IPR available	PANTHER	PTHR11945:SF354	FLORAL HOMEOTIC PROTEIN PISTILLATA	coord: 1..210
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..210
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 51.35 coord: 3..23 score: 69.24 coord: 23..38 score: 66.6
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.9E-40 score: 148.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.3E-22 score: 78.9
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.324
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..163 e-value: 2.5E-19 score: 69.1
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 84..170 score: 14.468
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	G3DSA:3.40.1810.10		coord: 13..103 e-value: 1.6E-23 score: 84.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	SSF55455	SRF-like	coord: 2..96
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..80 e-value: 1.96685E-41 score: 136.143

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G028010	CSPI04G17540	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G028010	Cucsa.018420	Cucumber (Gy14) v1	cgycucB405
CsaV3_4G028010	CmaCh09G007680	Cucurbita maxima (Rimu)	cmacucB0029
CsaV3_4G028010	CmaCh01G013650	Cucurbita maxima (Rimu)	cmacucB0555
CsaV3_4G028010	CmoCh09G007600	Cucurbita moschata (Rifu)	cmocucB0017
CsaV3_4G028010	CmoCh01G014180	Cucurbita moschata (Rifu)	cmocucB0542
CsaV3_4G028010	Cp4.1LG02g03120	Cucurbita pepo (Zucchini)	cpecucB0711
CsaV3_4G028010	Cp4.1LG06g06100	Cucurbita pepo (Zucchini)	cpecucB0971
CsaV3_4G028010	CsGy4G016730	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G028010	Carg00312	Silver-seed gourd	carcucB0701
CsaV3_4G028010	Carg20085	Silver-seed gourd	carcucB1091
CsaV3_4G028010	Cla023193	Watermelon (97103) v1	cucwmB371
CsaV3_4G028010	MELO3C010515	Melon (DHL92) v3.5.1	cucmeB298
CsaV3_4G028010	ClCG11G016000	Watermelon (Charleston Gray)	cucwcgB292
CsaV3_4G028010	Lsi04G018380	Bottle gourd (USVL1VR-Ls)	cuclsiB315
CsaV3_4G028010	MELO3C010515.2	Melon (DHL92) v3.6.1	cucmedB290
CsaV3_4G028010	Cla97C11G221980	Watermelon (97103) v2	cucwmbB286
CsaV3_4G028010	Bhi09G002277	Wax gourd	cucwgoB427

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G028010	Bottle gourd (USVL1VR-Ls)	cuclsiB339