CmoCh01G014180 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G014180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MADS box transcription factor
Location	Cmo_Chr01 : 11128669 .. 11133140 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTTTATCAAAATTCCTTAGCTCAAAAACAGAAAAACACAAACAAATGGGAAGAGGGAAGATCGAGATCAAGCGGATTGAAAACTCAAGCAACCGACAAGTCACTTATTCAAAGAGACGAAATGGGATAATCAAGAAGGCTAAAGAAATCACTGTTCTTTGTGATGCTCATGTTTCTCTTGTTGTTTTTGCTAGCTCTGGCAAAATGCATGAGTATTGCAGCCCTTCTATGCAGTAAGAGATTCAAAACATTTCAAATTTTTTTAAAAATTGAGCTTTTTTTGAGGTTTTTTTTTTACTTTTCTTTTTGAAGGTTGGTTGATATCTTGGATAAGTATCATAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGGTATTTTGGGTCAAGATCTAAGCTTTTTGATATGGGGTGTGATACCCTTGTTTGGATCTTGGGTTTGATTTTGATATCTGTTTTGAAATGGGGTTTGGTTTTGATATGGGAAGTGATACCTATTTTCGATCTTGGTTTTGATTTTTGATATCTATTTTGAAATGGGTTTTGCTTTTGATTTGGGAAGTGGTACCCTAGTTTGGATCTCGGCTTTGATTTTGATATCTATTTTTGTAACGGTCCAAACCCACTGCTAGATATTGTTTTTTTTGAATTTTTTCTTTTGGGCTTCCTCTCAAGGCTTTAAAACGCGTATGGGGAAGGTTTATACACTGTAAAGGTGTTTCGTTCTCCTCTCCACCCAATATGGGATATCACAATTTTAAAATGGGTTTTGCTTTTGATACGAGAAGTGATACCCAGTTTGGATCTTGGTTTTTGATTTTGATATCTATTTTGAAATGGGTTTTGCTTTTGCTACCCTAGTTTGGATCTTGGTTTTGATTTTGATATCTATTTTTGTAATAGTTGGGACCCATCACTAGCCGATATTATTCTTTTTTGACTTTTTCTTTCCGACTTTTCTTCAAAGTTTTAAAATGCGTATACTAAGAGAAGGTTTTCATACACTTACAAAGGGTGTTTCGTTCTCCTCCCCAACTAAGGTGAGATTTCACCCTTTTAAAATGGGTTTTGCTTTTGATATGGAAAGTGATACCTAGTTTGGATCTTCCGCTTTGATTTTGATATCTATTGTGAAATGGGTTTTGGTTTTGATATGGGAAGTGATACCCTTGGTTTTCGATTTTGATATCTATTTTGAAATGGGGTTTTTTTTTTTTGAGGATTTAGCATGAAAAAGGAAAGATAAAACTAAGAGTAAAGTGAGATCGAAGAACAGATCTAGTACTGAATTATGTATTGATTTGATGAAACTTATTTTTCTTCACCTCATTTGTTTTTCAACTGAAATCATAAGAGAGGGAAGAGGGAATGGAAAGTTATTTACTAGTTTTATACTTCTAGATCTGCTGCCCAGCAGAGAATATATTTGTGAAAAAGAAGTATAAAACCCTATTTTTGTTCAAATATTTGGTTATCGATCCAATCTTTTTAACGTTCTTCGAAGATATTTTGCTCTAATATTCGTGTTAATTTATCATTACAAAAACTTTTTGATCTGATATCTATGTTAAGTTATGATTCGGTTGACGTTTTACCATAATACCCATGTTAAATTATCGTTCTGAAAACCTTTTGCTTTGATATCCATGTTAAATTATCATTTTAAGGACGTTGTGTGATAATACCCATGTTAAATTAGTGTTTTAAGGATGTTTTGTTATAATACTCGGGTTAAATTATTGTTTTAAGGATGTTTTTGTTATAATATCCATTTTAAGTTATCGTTTTAAGGTTGTTTTGTTATGATACCCGTGTTAAATTATTATTTTAAGGATGTTTTGCTATAATACCCTTGTTAAAGGACTGTTTTAAAGATGTTTTACTATAATATCCATTTTAAGTTATTGTTTTAAGGACAATTTGCTATAGTTCTCATGTTAAATTATTTTATTAAGGATATTTTTACTATAATGCCTCTATTAAATTATTGTTTTAAGGATGTTTTTTTATAATTATTGTTTTAAGGATGTTTTGCTTTTAACGATGTTTTGCTATAATATCCCTGTTAAATTATTGTTTTAAGGATGTTTTGCTATAATATCCATTTTAAGTTATCGTTTTAAGGATGTTTCGCTATAATACCCATATTAAATTATTAGTCCGAAGATTGCTCCAATGCCCATATTCGATTATCGTTTTGATGATAACTTGCTATTATACTCGTGTTAAATCATCATTTTAAAAATATTTTACTTTATTATATTATTAAATTATGATTTCAAAGACACTTGTATTAAATTATCACTTGTAAGACAGTTTTGCTATAATACCCCTATTAAATTATTAGAAATTTTTCTCTAATACCCCTGTTAAATTACCATTTTGCTATAATACCCCTATTAAATTATTAGAAATTTTTCTCTAATACCCCTGTTAAATTACCATTTTGCTATAATACCTCTATTAAATTATTAGAAATTTTGCTCTAATACCCCTGTTAAATTACCATTTTGCTATAATACCCCTATTAAATTATTAGAAATTTTGCTCTAATACCCCTGTTAAATTACCATTTTGCTATAATACCCCTATTAAATTATTAGAAATTTTTCTCTAATACCCCTCTTAAATTACCATTTTGCTATAATACCCGCATTCAGAAGATATTTTACTCTAATGCCCCGTGTTAAAAAAAATATTTTGCTATAATATAATCATGTTAAATTATGATGCAGATGCATTTTACTTTAATACCCTTGTAATTATTTTATTTATTTATTTTTTGGTATTTGAAACTATTACAGAATCTGAGCAATGAATTGGATAGAGTGAAGAAGGAAAACGACAACATGCAGATTGAGCTGAGGTTAAATTCTCAATTTTTATTATTTATTATTTATTTTAAAATTCTCTGTATATTTATTAAATAAATAATAATAATAATAATAATAATAATAATAATAATAATGTTAGACGAACACTACTCTCTACAATGTTATGATATTGTCCACTTTGAACATAAGCTCTCATGGCTTTGCTTCGGGCTTTCTCAAAAGGCCTCATACCAATGGAAGTGTATTCTTAGATTATAAACCCATGACCATTCCCTAAATTAACCGACACTTTCATCCAACAAATAATAATATTGATGGGACTGAAGAACAGGCATCTGAGAGGCGAAGATATAACGTCTCTCAATTACAAGGAGCTAATGGCTCTTGAACAAGCTCTTGAAAATGGCCTCATTGGTGTTCGTGAAAAGCAGGTTTTTATTTTATTTTATTTTTTAAATATAAGTTTAAATTTTATTTTAATTATAAATATAATTTTAATTTTTTTTTTGCTGTGATATGCAGTCGGAGTTCATGAAAATGATGAGGACAAATGTAAGTATATTCATCCCTATTTTTTCTCCCAATTATTTTTAATTAATAAAGTATTCATGTTACTAATTTATTTTTCAAAAAATGATTTAAAAAATATTAAAATTTTATTTTATATATATAACCGAGCATATTGTATATATATTTTAAAATATGTTGTTAATTAAATAATATAAATTAATTATTATTATTATTATTATTGTTTTTTGTTGAATAAAAATAGGAGAGGATGATGGAAGAGGAGAATAAGCGGCTGAACAATGAGCTGGTAATTTAGTTCACAACCTTAGCTCTTTAAATACTATAATTATTTTATTTTTTATTTAATTAAGTTTATAATAATTTATTTAAATTAAATATATATATATATATATATATATATATAGATATATCGATGAGGATTCAAATGTTTCCTTTAAAAAGTTCCGTTTTATAACGGTTGGATTAAAATCTCACATCTGCTAATTTATGAAATGTTCATGTGTTTATAATCAACAAATATTTTCTCAACTGCTAATTTATGAAATGTTCATGTGTTTATAATCAACAAATATTTTCTCAACTGGTATGAGGCATTTTGGGGAAGCCCCAAAGCAAAACCATGCGAGCTTATGTTCAAACTGAATAATATCATACTATTGTAGAGAGTCGTGTTCATGGTGATTATAAATTTAAATTTTAAAATTAATAAAAAATATAATAGTTATTTAAATGCATTATATTATATTATATATATATAATTGCAGTACCAAAAGGAGATGGAAGCCATGGGGGAATGTGTGAGAGAAATGGATAATGGATACAATCAGAGAATGAGAGATTTCAATTCTCAGATGCCTTTTGCGTTCAGAGTGCAGCCTATTCAGCCAAATCTACAAGAAAGGATATAATTACCATATATATATATATATATATATATGTTATCATTATCGTATAACTTTTAAGCTAATGTTTTAAAACTATAGGTTATATTATGTTATCATATGATGAAAACTTTGGATATTGTTAAGCATATGATCTTAATTTTAATTGCTTGTATACGACATTCTAGGGGTAAAACGGAGAATAAATTATGATTTCTATA

mRNA sequence

GCCTTTATCAAAATTCCTTAGCTCAAAAACAGAAAAACACAAACAAATGGGAAGAGGGAAGATCGAGATCAAGCGGATTGAAAACTCAAGCAACCGACAAGTCACTTATTCAAAGAGACGAAATGGGATAATCAAGAAGGCTAAAGAAATCACTGTTCTTTGTGATGCTCATGTTTCTCTTGTTGTTTTTGCTAGCTCTGGCAAAATGCATGAGTATTGCAGCCCTTCTATGCAGTTGGTTGATATCTTGGATAAGTATCATAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGAATCTGAGCAATGAATTGGATAGAGTGAAGAAGGAAAACGACAACATGCAGATTGAGCTGAGGCATCTGAGAGGCGAAGATATAACGTCTCTCAATTACAAGGAGCTAATGGCTCTTGAACAAGCTCTTGAAAATGGCCTCATTGGTGTTCGTGAAAAGCAGTCGGAGTTCATGAAAATGATGAGGACAAATGAGAGGATGATGGAAGAGGAGAATAAGCGGCTGAACAATGAGCTGTACCAAAAGGAGATGGAAGCCATGGGGGAATGTGTGAGAGAAATGGATAATGGATACAATCAGAGAATGAGAGATTTCAATTCTCAGATGCCTTTTGCGTTCAGAGTGCAGCCTATTCAGCCAAATCTACAAGAAAGGATATAATTACCATATATATATATATATATATATATGTTATCATTATCGTATAACTTTTAAGCTAATGTTTTAAAACTATAGGTTATATTATGTTATCATATGATGAAAACTTTGGATATTGTTAAGCATATGATCTTAATTTTAATTGCTTGTATACGACATTCTAGGGGTAAAACGGAGAATAAATTATGATTTCTATA

Coding sequence (CDS)

ATGGGAAGAGGGAAGATCGAGATCAAGCGGATTGAAAACTCAAGCAACCGACAAGTCACTTATTCAAAGAGACGAAATGGGATAATCAAGAAGGCTAAAGAAATCACTGTTCTTTGTGATGCTCATGTTTCTCTTGTTGTTTTTGCTAGCTCTGGCAAAATGCATGAGTATTGCAGCCCTTCTATGCAGTTGGTTGATATCTTGGATAAGTATCATAAGCAATCTGGGAAGAGGCTGTGGGATGCTAAGCATGAGAATCTGAGCAATGAATTGGATAGAGTGAAGAAGGAAAACGACAACATGCAGATTGAGCTGAGGCATCTGAGAGGCGAAGATATAACGTCTCTCAATTACAAGGAGCTAATGGCTCTTGAACAAGCTCTTGAAAATGGCCTCATTGGTGTTCGTGAAAAGCAGTCGGAGTTCATGAAAATGATGAGGACAAATGAGAGGATGATGGAAGAGGAGAATAAGCGGCTGAACAATGAGCTGTACCAAAAGGAGATGGAAGCCATGGGGGAATGTGTGAGAGAAATGGATAATGGATACAATCAGAGAATGAGAGATTTCAATTCTCAGATGCCTTTTGCGTTCAGAGTGCAGCCTATTCAGCCAAATCTACAAGAAAGGATATAA

Homology

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BLAST of CmoCh01G014180 vs. Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.1e-78
Identity = 149/212 (70.28%), Postives = 179/212 (84.43%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSL++F +SGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  L D+LD Y K SG+RLWDAKHENLSNE+DR+KKENDNMQ++LRHL+GEDI SLN+KE
Sbjct: 61  STTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LM LE+ L NGL  +  KQSE ++M+R N++++EEE+K+L   L+QKEM AMG  +R ++
Sbjct: 121 LMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQKEMAAMGGNMRMIE 180

Query: 181 NGYNQRMRDFN-SQMPFAFRVQPIQPNLQERI 212
             Y+QR RD+   QMPFA RVQP+QPNL ER+
Sbjct: 181 EVYHQRDRDYEYQQMPFALRVQPMQPNLHERM 212

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BLAST of CmoCh01G014180 vs. Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.0e-77
Identity = 148/214 (69.16%), Postives = 179/214 (83.64%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDAHVS+++FASSGKMHE+CSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVD+LD YHK SGKRLWD KHE+L NE++RVKKEND+MQIELRHL+GEDIT+LNYKE
Sbjct: 61  STTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVRE-- 180
           LM LE ALENG   ++ KQ EF++MMR +  M+EEEN+ L  +L Q  ++ M + V E  
Sbjct: 121 LMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEENQSLQFKLRQMHLDPMNDNVMESQ 180

Query: 181 --MDNGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
              D+ ++Q + D+ +QMPFAFRVQP+QPNLQER
Sbjct: 181 AVYDHHHHQNIADYEAQMPFAFRVQPMQPNLQER 214

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BLAST of CmoCh01G014180 vs. Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.0e-74
Identity = 142/210 (67.62%), Postives = 177/210 (84.29%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA VS+++FASSGKMHE+ S 
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILD+YHK +G+RLWDAKHENL NE+++VKK+NDNMQIELRHL+GEDITSLN++E
Sbjct: 61  S--LVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LM LE AL+NGL  +R KQ++ ++MMR   + MEEE  +LN +L Q E+ +M   + E+ 
Sbjct: 121 LMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQLEIASMNRNMGEIG 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
             ++QR  ++ +QMPFAFRVQP+QPNLQER
Sbjct: 181 EVFHQRENEYQTQMPFAFRVQPMQPNLQER 208

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BLAST of CmoCh01G014180 vs. Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.7e-71
Identity = 143/212 (67.45%), Postives = 174/212 (82.08%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA VS+++FASSGKMHE+ S 
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILD+YHK +G+RL DAKHENL NE+++VKK+NDNMQIELRHL+GEDITSLN++E
Sbjct: 61  S--LVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LM LE ALENGL  +R KQ+E ++MMR   + MEEE  +LN +L Q E+  M   + E+ 
Sbjct: 121 LMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQLEIATMNRNMGEIG 180

Query: 181 NGYNQR-MRDFNSQMPFAFRVQPIQPNLQERI 212
             + QR   D+ + MPFAFRVQP+QPNLQER+
Sbjct: 181 EVFQQRENHDYQNHMPFAFRVQPMQPNLQERL 210

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BLAST of CmoCh01G014180 vs. Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 3.4e-64
Identity = 131/211 (62.09%), Postives = 163/211 (77.25%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA V+L++FAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           SM L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELRHL+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E A+E+GL  VR+ Q E +   R NE+MM EE ++L  +L Q+EM           
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAIAS------- 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           N     MRD + Q  F +RVQPIQPNLQE+I
Sbjct: 181 NARGMMMRDHDGQ--FGYRVQPIQPNLQEKI 202

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BLAST of CmoCh01G014180 vs. TrEMBL
Match: Q9ZTQ9_CUCSA (MADS box protein 26 OS=Cucumis sativus GN=CUM26 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.5e-103
Identity = 198/210 (94.29%), Postives = 202/210 (96.19%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMALE+ALENGL GVREKQSEFMKMMRTNERMMEEENKRLN ELYQKEM AMG+ VREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

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BLAST of CmoCh01G014180 vs. TrEMBL
Match: F1BWT4_9ERIC (MADS domain transcription factor OS=Camellia japonica GN=GLO1 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.5e-87
Identity = 171/211 (81.04%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSG+RLWDAKHENLSNELDR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E+ALENGL  VREKQ E++ MM  N++ +EEENK LN  L+Q+EM    E  REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFMLHQQEMNM--ESSREME 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           NGY+QR+RDF SQMPFAFRVQPIQPNLQERI
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQERI 209

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BLAST of CmoCh01G014180 vs. TrEMBL
Match: A0A0C5BV63_9ERIC (MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera PE=2 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.0e-87
Identity = 171/211 (81.04%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSG+RLWDAKHENLSNELDR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E+ALENGL  VREKQ E++ MM  N++ +EEENK LN  L+Q+EM    E  REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFILHQQEMNM--ESSREME 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           NGY+QR+RDF SQMPFAFRVQPIQPNLQERI
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQERI 209

[Close]

BLAST of CmoCh01G014180 vs. TrEMBL
Match: A0A068B128_CAMSI (MADS-box transcription factor GLOBOSA-like protein OS=Camellia sinensis GN=GLO1 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 7.5e-87
Identity = 170/211 (80.57%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENS+NRQVTYSKRRNGI+KKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSNNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSG+RLWDAKHENLS ELDR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSIELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E+ALENGL  VREKQ E++ MM  N++M+EEENK LN  L+Q+EM    E  REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKMLEEENKHLNFMLHQQEMNM--ESSREME 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           NGY+QR+RDF SQMPFAFRVQPIQPNLQERI
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQERI 209

[Close]

BLAST of CmoCh01G014180 vs. TrEMBL
Match: F4ZKM3_ACTCH (PI OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85
Identity = 167/211 (79.15%), Postives = 189/211 (89.57%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIE+SSNRQVTYSKRRNGI+KKAKEI+VLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIEHSSNRQVTYSKRRNGILKKAKEISVLCDAKVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNELDR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGKRLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMALE+ALENGL G+REKQ E  KMM+ NE+M+E+ENK LN  L+Q+ M       REM+
Sbjct: 121 LMALEEALENGLSGIREKQMEVFKMMKKNEKMLEDENKHLNFMLHQQGMTMES---REME 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           NGY+QR+RD+  QMPFAF VQPIQPNLQ+RI
Sbjct: 181 NGYHQRVRDYQHQMPFAFHVQPIQPNLQDRI 208

[Close]

BLAST of CmoCh01G014180 vs. TAIR10
Match: AT5G20240.1 (AT5G20240.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 246.1 bits (627), Expect = 1.9e-65
Identity = 131/211 (62.09%), Postives = 163/211 (77.25%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA V+L++FAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           SM L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELRHL+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E A+E+GL  VR+ Q E +   R NE+MM EE ++L  +L Q+EM           
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAIAS------- 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           N     MRD + Q  F +RVQPIQPNLQE+I
Sbjct: 181 NARGMMMRDHDGQ--FGYRVQPIQPNLQEKI 202

[Close]

BLAST of CmoCh01G014180 vs. TAIR10
Match: AT5G23260.2 (AT5G23260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 136.3 bits (342), Expect = 2.1e-32
Identity = 72/172 (41.86%), Postives = 117/172 (68.02%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIK+IEN + RQVT+SKRR G+IKK +E+++LCDAH+ L+VF+++GK+ E+CS 
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  SMQLVDILDKYHKQSGKRLWD--AKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNY 120
             ++  ++D+Y   +G RL D     E L +E++ +++E  N+++ LR   G D+ S+  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPP 120

Query: 121 KELMALEQALENGLIGVREKQSEFMKMMRTN----ERMMEEENKRLNNELYQ 167
            EL  LE+ LE+ ++ VRE+++E M+    N     RM+EE+N  +   L++
Sbjct: 121 NELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172

[Close]

BLAST of CmoCh01G014180 vs. TAIR10
Match: AT3G54340.1 (AT3G54340.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 124.4 bits (311), Expect = 8.3e-29
Identity = 71/183 (38.80%), Postives = 113/183 (61.75%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           M RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E+TVLCDA VS+++F+SS K+HEY SP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           +    +I+D Y   S   +W  ++E +     ++ + N N++ +++   GE +  L+ +E
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120

Query: 121 LMALEQALENGLIGVREKQSEFM-KMMRTNERMMEEENKRLNNELYQKEMEAMGECVREM 180
           L  LE  +EN    VRE++ + +   + T ++  + +     N +++ E+ A       +
Sbjct: 121 LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLV 180

Query: 181 DNG 183
           DNG
Sbjct: 181 DNG 183

[Close]

BLAST of CmoCh01G014180 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 7.8e-27
Identity = 74/173 (42.77%), Postives = 114/173 (65.90%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA V+L++F++ GK++E+CS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  SMQLVDILDKYHKQSGKRLW----DAKH-ENLSNELDRVKKENDNMQIELRHLRGEDITS 120
           S  ++  LD+Y K S   +      AK  EN   E  ++K   +N+Q + R+L GED+  
Sbjct: 61  S-NMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LNYKELMALEQALENGLIGVREKQSEFM----KMMRTNERMMEEENKRLNNEL 165
           LN KEL  LE+ L+  L  VR  ++++M      ++  E+M+ E N+ L  +L
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172

[Close]

BLAST of CmoCh01G014180 vs. TAIR10
Match: AT5G13790.1 (AT5G13790.1 AGAMOUS-like 15)

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-26
Identity = 72/174 (41.38%), Postives = 115/174 (66.09%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIEN+++RQVT+SKRR+G++KKA+E++VLCDA V+++VF+ SGK+ EY S 
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

Query: 61  SMQLVDILDKY--HKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNY 120
            M+    L +Y  H+ S      +K E    E+D +K +   +Q +   L+G+ +  L +
Sbjct: 61  GMK--QTLSRYGNHQSSSA----SKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTF 120

Query: 121 KELMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAM 173
           KEL +LEQ L + LI VRE++ E +   +  E  ++E+   L NE  +++++ +
Sbjct: 121 KELQSLEQQLYHALITVRERK-ERLLTNQLEESRLKEQRAELENETLRRQVQEL 167

[Close]

BLAST of CmoCh01G014180 vs. NCBI nr
Match: gi|793418639|ref|NP_001292651.1| (floral homeotic protein PMADS 2 [Cucumis sativus])

HSP 1 Score: 383.6 bits (984), Expect = 2.2e-103
Identity = 198/210 (94.29%), Postives = 202/210 (96.19%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMALE+ALENGL GVREKQSEFMKMMRTNERMMEEENKRLN ELYQKEM AMG+ VREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

[Close]

BLAST of CmoCh01G014180 vs. NCBI nr
Match: gi|659086972|ref|XP_008444207.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 3.1e-102
Identity = 196/210 (93.33%), Postives = 201/210 (95.71%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LM+LE+ALENGL GVREKQSEFMKMMRTNERMMEEENKRLN ELYQKEM AMG+ VREMD
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 217

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPN QER
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQER 247

[Close]

BLAST of CmoCh01G014180 vs. NCBI nr
Match: gi|778694283|ref|XP_011653776.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-93
Identity = 184/210 (87.62%), Postives = 188/210 (89.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMALE+ALENGL GVREKQSEFMKMMRTN               YQKEM AMG+ VREMD
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTN---------------YQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 195

[Close]

BLAST of CmoCh01G014180 vs. NCBI nr
Match: gi|659086974|ref|XP_008444208.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 1.7e-92
Identity = 182/210 (86.67%), Postives = 187/210 (89.05%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSGKRLWDAKHENLSNE+DRVKKENDNMQIELRHLRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LM+LE+ALENGL GVREKQSEFMKMMRTN               YQKEM AMG+ VREMD
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTN---------------YQKEMVAMGDSVREMD 217

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 211
            GYNQRMRDFNSQMPFAFRVQPIQPN QER
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQER 232

[Close]

BLAST of CmoCh01G014180 vs. NCBI nr
Match: gi|323482761|gb|ADX86812.1| (MADS domain transcription factor [Camellia japonica])

HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87
Identity = 171/211 (81.04%), Postives = 191/211 (90.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAHVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDA VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  SMQLVDILDKYHKQSGKRLWDAKHENLSNELDRVKKENDNMQIELRHLRGEDITSLNYKE 120
           S  LVDILDKYHKQSG+RLWDAKHENLSNELDR+KKEND+MQIELRHL+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEQALENGLIGVREKQSEFMKMMRTNERMMEEENKRLNNELYQKEMEAMGECVREMD 180
           LMA+E+ALENGL  VREKQ E++ MM  N++ +EEENK LN  L+Q+EM    E  REM+
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFMLHQQEMNM--ESSREME 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQERI 212
           NGY+QR+RDF SQMPFAFRVQPIQPNLQERI
Sbjct: 181 NGYHQRVRDFQSQMPFAFRVQPIQPNLQERI 209

The following BLAST results are available for this feature:

BLAST of CmoCh01G014180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MADS2_PETHY	4.1e-78	70.28	Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1	[more]
GLOB_ANTMA	2.0e-77	69.16	Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1	[more]
GLOB_TOBAC	8.0e-74	67.62	Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1	[more]
FBP1_PETHY	1.7e-71	67.45	Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1	[more]
PIST_ARATH	3.4e-64	62.09	Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1	[more]

BLAST of CmoCh01G014180 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9ZTQ9_CUCSA	1.5e-103	94.29	MADS box protein 26 OS=Cucumis sativus GN=CUM26 PE=2 SV=1	[more]
F1BWT4_9ERIC	1.5e-87	81.04	MADS domain transcription factor OS=Camellia japonica GN=GLO1 PE=2 SV=1	[more]
A0A0C5BV63_9ERIC	2.0e-87	81.04	MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera ...	[more]
A0A068B128_CAMSI	7.5e-87	80.57	MADS-box transcription factor GLOBOSA-like protein OS=Camellia sinensis GN=GLO1 ...	[more]
F4ZKM3_ACTCH	1.1e-85	79.15	PI OS=Actinidia chinensis PE=2 SV=1	[more]

BLAST of CmoCh01G014180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20240.1	1.9e-65	62.09	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.2	2.1e-32	41.86	K-box region and MADS-box transcription factor family protein	[more]
AT3G54340.1	8.3e-29	38.80	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	7.8e-27	42.77	K-box region and MADS-box transcription factor family protein	[more]
AT5G13790.1	5.0e-26	41.38	AGAMOUS-like 15	[more]

BLAST of CmoCh01G014180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|793418639\|ref\|NP_001292651.1\|	2.2e-103	94.29	floral homeotic protein PMADS 2 [Cucumis sativus]	[more]
gi\|659086972\|ref\|XP_008444207.1\|	3.1e-102	93.33	PREDICTED: floral homeotic protein PMADS 2 isoform X1 [Cucumis melo]	[more]
gi\|778694283\|ref\|XP_011653776.1\|	1.2e-93	87.62	PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis sativus]	[more]
gi\|659086974\|ref\|XP_008444208.1\|	1.7e-92	86.67	PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis melo]	[more]
gi\|323482761\|gb\|ADX86812.1\|	2.2e-87	81.04	MADS domain transcription factor [Camellia japonica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G014180.1	CmoCh01G014180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 3.1E-28coord: 3..23 score: 3.1E-28coord: 23..38 score: 3.1
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 8.1
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 1.5
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 32
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..96 score: 1.7
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..164 score: 7.1
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 84..170 score: 14
None	No IPR available	unknown	Coil	Coil	coord: 143..170 score: -coord: 77..111 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..210 score: 1.9E
None	No IPR available	PANTHER	PTHR11945:SF97	FLORAL HOMEOTIC PROTEIN PISTILLATA	coord: 2..210 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G014180	Cucsa.018420	Cucumber (Gy14) v1	cgycmoB0726
CmoCh01G014180	CmaCh09G007680	Cucurbita maxima (Rimu)	cmacmoB041
CmoCh01G014180	CmaCh01G013650	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G014180	Cla023193	Watermelon (97103) v1	cmowmB456
CmoCh01G014180	Csa4G358770	Cucumber (Chinese Long) v2	cmocuB454
CmoCh01G014180	MELO3C010515	Melon (DHL92) v3.5.1	cmomeB423
CmoCh01G014180	ClCG11G016000	Watermelon (Charleston Gray)	cmowcgB391
CmoCh01G014180	CSPI04G17540	Wild cucumber (PI 183967)	cmocpiB458
CmoCh01G014180	Lsi04G018380	Bottle gourd (USVL1VR-Ls)	cmolsiB424
CmoCh01G014180	Cp4.1LG02g03120	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G014180	Cp4.1LG06g06100	Cucurbita pepo (Zucchini)	cmocpeB461
CmoCh01G014180	MELO3C010515.2	Melon (DHL92) v3.6.1	cmomedB487
CmoCh01G014180	CsaV3_4G028010	Cucumber (Chinese Long) v3	cmocucB0542
CmoCh01G014180	Cla97C11G221980	Watermelon (97103) v2	cmowmbB437
CmoCh01G014180	Bhi09G002277	Wax gourd	cmowgoB0615
CmoCh01G014180	CsGy4G016730	Cucumber (Gy14) v2	cgybcmoB476
CmoCh01G014180	Carg20085	Silver-seed gourd	carcmoB1400
CmoCh01G014180	Carg00312	Silver-seed gourd	carcmoB0922

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh01G014180	CmoCh09G007600	Cucurbita moschata (Rifu)	cmocmoB013

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G014180	Cucumber (Chinese Long) v3	cmocucB0558
CmoCh01G014180	Cucumber (Chinese Long) v2	cmocuB469