Cp4.1LG06g06100 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g06100
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	MADS-box transcription factor
Location	Cp4.1LG06 : 3725574 .. 3728710 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATCCCTTACAATTTTGGCAGTTGGCTTGGGGTTGTCACAAACCCATAAACAAGCACTCATGTTCTGTATGATTTAGAAAGTTCTTAAGCTTCCAAACCCAATATAGAATACCCCTTTAATTAAACCCTCTTTCAATGCCTACCTTTTCCCACTCCCATTTCCACTCCCTTAGCTCAAGAACACAAGAACAAAGAACAAATGGGAAGGGGAAAGATTGAAATCAAGAGGATTGAGAACTCAAGCAACAGGCAAGTGACCTATTCAAAGAGAAGAAATGGTATCATCAAGAAGGCCAAAGAGATCACTGTTCTTTGTGATGCTCAAGTTTCTCTTGTGGTGTTTGCTAGCTCTGGCAAAATGCATGAGTATTGTAGCCCTTCTACACCGTAAGTGATATCAATAACATACTCAAATCATTGAATTTTTGTTCATATTTCTTGATTTTGCATCAAATAATCTCATGTTTTTGTGTGTTTTTTTTTTGTTGACAAGGTTGATTGATATCTTGGATAAGTATCATAAGCAATCGGGGAAGAGGCTGTGGGATGCTAAACATGAGGTATCTCTCTCTCTCTAGCTTTCTCTCTCCTCATGAACTTGAAGATCTAAGCTTTTTGATAGGGAAATCAAACCCTAGAAGAAAATTTGGAACATGGGTTTTGTTTATATTCATAAATCATTGGTGGGTTTCATTTTATTTTGCCAAAATCATGTTAGAAAATCTTGGATTTGAAATCTATGAACTGATCTAAAAATGGGTTCTTTTCTTTCTTCATGATTTATGTGAATATATTGCATAGAAAAGGAAAGTTGAAACTAAGAGAAGTATTTTTCAGCTGAAAACACAAAAAAAAAAAAAAAAACATCCTTTCATAGAGATCTATTGTCACAAAACTCGAACGAACCCGAACAAACCCAGAAGCTTAAGCTAATAGATCGAGATATCTTGAGTCTTCTTTTATTCGATCGAGTATTGTAATTTGCATTTGTTGGATCAAAGGGGAATGATCATGAGTTTATAGTCAATGAATACTATTTCCATTCGTGAGAGGCCTTTTAAGAAGTCCAAAGCAAAGCGATGAGCTTATGCTCAGAGTCACAATATCATACCATTGTGGAGAGTCGTGTTCAACTAACATGGTATCAGAGCCATGCTCTAAACTTAGTCATGTCAATAGAATACTCAAATGTCGAACAAAAAATGAGTCGAGTCTCGATTAAGGGGAAGCATACTTTGTTCGAGGGGAGGTGTTCGGGTATTGTATTAAATCATCGTAAATTTAAATAAAAATGTTTAATTGTTTTTTATGTTTGAAAAAATTACAGAATTTAAGCAATGAAATGGATAGGGTTAAGAAAGAAAATGACAACATGCAGATTGAGCTCAGGTAATATTATAAATATATGATTTTATTTATTTATTTATTTTAGAATTATAATTTTGATAAATAATAATATATAATTTATGAAAAAAAAATAGGCGTTTGAGAGGAGAAGATATAACATCTTTGAACTACAAGGAGCTAATGGCTCTTGAAGAAGCCCTTGAAAATGGCCTTACTGGTGTTCGTGAGAAGCAGGTTTTTCTAATTTTTATTTTTTTTTAAATTTAATTTCATTATTAATTTGATTATTAATTAATTAATTTTTTTTTTTACTGTTTGGTAATTATACAGTCGGAGCTCATGAAGATGATGAGGACAAATGTACGTATATATATATATATATATATTTATTTATTTTCTTTTAATTTTCTTTAATTTTGATATTCTTTTATGATTTTTCGGTATNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATAGGTTTATTTAAAAAAAAAAAAATCCAATTTTTTACTTAAATTTGCTTTAGAGATTTTATAATTATATAAATAAAAACATAAATTATCATTTTTGCTTATAAAATGCATATTAAAATAAAAAATATTTACAATTTTAGATATTTAATTTCAAAAACTAGGTTTCATATAAAGAAATAATTCAAATATAATTGAATTTTTTCTGACAAAATTATTATTAAAAATTAAATTAAATGTATTTGGATATTAATATTTTGTGATGTATAAATAATATTAATATTCTTGTTTGAATGTTTTGTAGGAAAGAATGATGGAAGAAGAGAACAAGCGCCTCAATTATGAGCTGGTAAATTTATTTATTTAATTTCTAATATTCCCATTTAATTAAAGTATATTTTATTTGCTTTTTTAAACCTATTTAATATTATATATGACTGTCTAATATTTCAAAATTATATTTTAAAAATTAAAAATTATAAAGATTTTCAAAATTTTTATTTAAATTCTTTAAATTTTAATTTTTTTTTCTATTACGATTTTAAGTTCGGTAGGGTTTATACTTTAAATTTTCGTTCATTTTAGTCGGTATACTTACAAAACATCCGTCTTGTTTTTGTATTTTTTAAAAATGACCATTTTAACCCTTTAGTATTTTTAATTCCTTTCAATCAAAGTTTTCGTACAAAATTTCAGTCATAAAAGGGTTTTAGTTATAAAATTTCGGTTAAAAATTTGCAAACACGGGTTCAAAAGCACAGTGACGTAAATTGTAAAAACCCATGTCCGAGATTCAGATAAGGATTCGGAATCAGGGTGAAGTAAATAACGTAACCCTGTTGAGGGAGACGCAGGAGAATGTCGGGACTATCTGAATTTTGAATCTGGAACACGGGTCGTTATAGTAGATAAACGGGTTTATATCTAAGTTTTGAATAATTGTGTTGATTGGATGATGTTTAAAGTGCAGTACCAAAAGGAGATGGTAGCAATGGGAGATGGTGTGGATAATGGATATAATCAAAGGATGAGAGATTTCAATTCTCAAATGCCCTTTGCGTTCAGAGTGCAGCCCATTCAGCCAAACCTACAAGAAAGGAACAATTAATCATGTTTTATATCATATATATCATATATATATCATATGTTATATTATATTATATGCTTTTGGAGTCTAAACTCTTTATGAAGTCTTGGATTTTAATTATATGTAAAACTTTGGGTTAAATTTTATGATATGATCTGAACTTTTAATACTGTTATGGTAAGCAT

mRNA sequence

TAATCCCTTACAATTTTGGCAGTTGGCTTGGGGTTGTCACAAACCCATAAACAAGCACTCATGTTCTGTATGATTTAGAAAGTTCTTAAGCTTCCAAACCCAATATAGAATACCCCTTTAATTAAACCCTCTTTCAATGCCTACCTTTTCCCACTCCCATTTCCACTCCCTTAGCTCAAGAACACAAGAACAAAGAACAAATGGGAAGGGGAAAGATTGAAATCAAGAGGATTGAGAACTCAAGCAACAGGCAAGTGACCTATTCAAAGAGAAGAAATGGTATCATCAAGAAGGCCAAAGAGATCACTGTTCTTTGTGATGCTCAAGTTTCTCTTGTGGTGTTTGCTAGCTCTGGCAAAATGCATGAGTATTGTAGCCCTTCTACACCGTTGATTGATATCTTGGATAAGTATCATAAGCAATCGGGGAAGAGGCTGTGGGATGCTAAACATGAGAATTTAAGCAATGAAATGGATAGGGTTAAGAAAGAAAATGACAACATGCAGATTGAGCTCAGGCGTTTGAGAGGAGAAGATATAACATCTTTGAACTACAAGGAGCTAATGGCTCTTGAAGAAGCCCTTGAAAATGGCCTTACTGGTGTTCGTGAGAAGCAGTCGGAGCTCATGAAGATGATGAGGACAAATGAAAGAATGATGGAAGAAGAGAACAAGCGCCTCAATTATGAGCTGTACCAAAAGGAGATGGTAGCAATGGGAGATGGTGTGGATAATGGATATAATCAAAGGATGAGAGATTTCAATTCTCAAATGCCCTTTGCGTTCAGAGTGCAGCCCATTCAGCCAAACCTACAAGAAAGGAACAATTAATCATGTTTTATATCATATATATCATATATATATCATATGTTATATTATATTATATGCTTTTGGAGTCTAAACTCTTTATGAAGTCTTGGATTTTAATTATATGTAAAACTTTGGGTTAAATTTTATGATATGATCTGAACTTTTAATACTGTTATGGTAAGCAT

Coding sequence (CDS)

ATGGGAAGGGGAAAGATTGAAATCAAGAGGATTGAGAACTCAAGCAACAGGCAAGTGACCTATTCAAAGAGAAGAAATGGTATCATCAAGAAGGCCAAAGAGATCACTGTTCTTTGTGATGCTCAAGTTTCTCTTGTGGTGTTTGCTAGCTCTGGCAAAATGCATGAGTATTGTAGCCCTTCTACACCGTTGATTGATATCTTGGATAAGTATCATAAGCAATCGGGGAAGAGGCTGTGGGATGCTAAACATGAGAATTTAAGCAATGAAATGGATAGGGTTAAGAAAGAAAATGACAACATGCAGATTGAGCTCAGGCGTTTGAGAGGAGAAGATATAACATCTTTGAACTACAAGGAGCTAATGGCTCTTGAAGAAGCCCTTGAAAATGGCCTTACTGGTGTTCGTGAGAAGCAGTCGGAGCTCATGAAGATGATGAGGACAAATGAAAGAATGATGGAAGAAGAGAACAAGCGCCTCAATTATGAGCTGTACCAAAAGGAGATGGTAGCAATGGGAGATGGTGTGGATAATGGATATAATCAAAGGATGAGAGATTTCAATTCTCAAATGCCCTTTGCGTTCAGAGTGCAGCCCATTCAGCCAAACCTACAAGAAAGGAACAATTAA

Protein sequence

MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSPSTPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKELMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGYNQRMRDFNSQMPFAFRVQPIQPNLQERNN

Homology

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BLAST of Cp4.1LG06g06100 vs. Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.2e-79
Identity = 150/211 (71.09%), Postives = 180/211 (85.31%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDA+VSL++F +SGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L D+LD Y K SG+RLWDAKHENLSNE+DR+KKENDNMQ++LR L+GEDI SLN+KE
Sbjct: 61  STTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDG---VD 180
           LM LEE L NGL+ +  KQSE+++M+R N++++EEE+K+L Y L+QKEM AMG     ++
Sbjct: 121 LMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQKEMAAMGGNMRMIE 180

Query: 181 NGYNQRMRDFN-SQMPFAFRVQPIQPNLQER 208
             Y+QR RD+   QMPFA RVQP+QPNL ER
Sbjct: 181 EVYHQRDRDYEYQQMPFALRVQPMQPNLHER 211

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BLAST of Cp4.1LG06g06100 vs. Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.7e-76
Identity = 145/214 (67.76%), Postives = 178/214 (83.18%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA VS+++FASSGKMHE+CSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+D+LD YHK SGKRLWD KHE+L NE++RVKKEND+MQIELR L+GEDIT+LNYKE
Sbjct: 61  STTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---- 180
           LM LE+ALENG + ++ KQ E ++MMR +  M+EEEN+ L ++L Q  +  M D V    
Sbjct: 121 LMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEENQSLQFKLRQMHLDPMNDNVMESQ 180

Query: 181 ---DNGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
              D+ ++Q + D+ +QMPFAFRVQP+QPNLQER
Sbjct: 181 AVYDHHHHQNIADYEAQMPFAFRVQPMQPNLQER 214

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BLAST of Cp4.1LG06g06100 vs. Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.0e-73
Identity = 141/210 (67.14%), Postives = 179/210 (85.24%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA+VS+++FASSGKMHE+ S 
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS- 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
            T L+DILD+YHK +G+RLWDAKHENL NE+++VKK+NDNMQIELR L+GEDITSLN++E
Sbjct: 61  -TSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDG---VD 180
           LM LE+AL+NGLT +R KQ++L++MMR   + MEEE  +LN++L Q E+ +M      + 
Sbjct: 121 LMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQLEIASMNRNMGEIG 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
             ++QR  ++ +QMPFAFRVQP+QPNLQER
Sbjct: 181 EVFHQRENEYQTQMPFAFRVQPMQPNLQER 208

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BLAST of Cp4.1LG06g06100 vs. Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70
Identity = 141/211 (66.82%), Postives = 174/211 (82.46%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEI+VLCDA+VS+++FASSGKMHE+ S 
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSS- 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
            T L+DILD+YHK +G+RL DAKHENL NE+++VKK+NDNMQIELR L+GEDITSLN++E
Sbjct: 61  -TSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDG---VD 180
           LM LE+ALENGLT +R KQ+E+++MMR   + MEEE  +LN +L Q E+  M      + 
Sbjct: 121 LMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQLEIATMNRNMGEIG 180

Query: 181 NGYNQR-MRDFNSQMPFAFRVQPIQPNLQER 208
             + QR   D+ + MPFAFRVQP+QPNLQER
Sbjct: 181 EVFQQRENHDYQNHMPFAFRVQPMQPNLQER 209

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BLAST of Cp4.1LG06g06100 vs. Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.7e-64
Identity = 128/207 (61.84%), Postives = 163/207 (78.74%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA+V+L++FAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           S  L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELR L+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGY 180
           LMA+E A+E+GL  VR+ Q E++   R NE+MM EE ++L ++L Q+EM        N  
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAI----ASNAR 180

Query: 181 NQRMRDFNSQMPFAFRVQPIQPNLQER 208
              MRD + Q  F +RVQPIQPNLQE+
Sbjct: 181 GMMMRDHDGQ--FGYRVQPIQPNLQEK 201

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BLAST of Cp4.1LG06g06100 vs. TrEMBL
Match: Q9ZTQ9_CUCSA (MADS box protein 26 OS=Cucumis sativus GN=CUM26 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.0e-104
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---D 180
           LMALEEALENGLTGVREKQSE MKMMRTNERMMEEENKRLNYELYQKEMVAMGD V   D
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

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BLAST of Cp4.1LG06g06100 vs. TrEMBL
Match: F4ZKM3_ACTCH (PI OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-86
Identity = 162/207 (78.26%), Postives = 190/207 (91.79%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIE+SSNRQVTYSKRRNGI+KKAKEI+VLCDA+VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIEHSSNRQVTYSKRRNGILKKAKEISVLCDAKVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+DILDKYHKQSGKRLWDAKHENLSNE+DR+KKEND+MQIELR L+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGKRLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGY 180
           LMALEEALENGL+G+REKQ E+ KMM+ NE+M+E+ENK LN+ L+Q+ M      ++NGY
Sbjct: 121 LMALEEALENGLSGIREKQMEVFKMMKKNEKMLEDENKHLNFMLHQQGMTMESREMENGY 180

Query: 181 NQRMRDFNSQMPFAFRVQPIQPNLQER 208
           +QR+RD+  QMPFAF VQPIQPNLQ+R
Sbjct: 181 HQRVRDYQHQMPFAFHVQPIQPNLQDR 207

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BLAST of Cp4.1LG06g06100 vs. TrEMBL
Match: F1BWT4_9ERIC (MADS domain transcription factor OS=Camellia japonica GN=GLO1 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.8e-86
Identity = 166/208 (79.81%), Postives = 189/208 (90.87%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+DILDKYHKQSG+RLWDAKHENLSNE+DR+KKEND+MQIELR L+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEM-VAMGDGVDNG 180
           LMA+EEALENGL  VREKQ E + MM  N++ +EEENK LN+ L+Q+EM +     ++NG
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFMLHQQEMNMESSREMENG 180

Query: 181 YNQRMRDFNSQMPFAFRVQPIQPNLQER 208
           Y+QR+RDF SQMPFAFRVQPIQPNLQER
Sbjct: 181 YHQRVRDFQSQMPFAFRVQPIQPNLQER 208

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BLAST of Cp4.1LG06g06100 vs. TrEMBL
Match: A0A0C5BV63_9ERIC (MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera PE=2 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 6.3e-86
Identity = 166/208 (79.81%), Postives = 189/208 (90.87%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGI+KKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+DILDKYHKQSG+RLWDAKHENLSNE+DR+KKEND+MQIELR L+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEM-VAMGDGVDNG 180
           LMA+EEALENGL  VREKQ E + MM  N++ +EEENK LN+ L+Q+EM +     ++NG
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKTLEEENKHLNFILHQQEMNMESSREMENG 180

Query: 181 YNQRMRDFNSQMPFAFRVQPIQPNLQER 208
           Y+QR+RDF SQMPFAFRVQPIQPNLQER
Sbjct: 181 YHQRVRDFQSQMPFAFRVQPIQPNLQER 208

[Close]

BLAST of Cp4.1LG06g06100 vs. TrEMBL
Match: A0A068B128_CAMSI (MADS-box transcription factor GLOBOSA-like protein OS=Camellia sinensis GN=GLO1 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.4e-85
Identity = 165/208 (79.33%), Postives = 189/208 (90.87%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENS+NRQVTYSKRRNGI+KKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSNNRQVTYSKRRNGIMKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+DILDKYHKQSG+RLWDAKHENLS E+DR+KKEND+MQIELR L+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGERLWDAKHENLSIELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEM-VAMGDGVDNG 180
           LMA+EEALENGL  VREKQ E + MM  N++M+EEENK LN+ L+Q+EM +     ++NG
Sbjct: 121 LMAIEEALENGLGSVREKQMEYIDMMEKNKKMLEEENKHLNFMLHQQEMNMESSREMENG 180

Query: 181 YNQRMRDFNSQMPFAFRVQPIQPNLQER 208
           Y+QR+RDF SQMPFAFRVQPIQPNLQER
Sbjct: 181 YHQRVRDFQSQMPFAFRVQPIQPNLQER 208

[Close]

BLAST of Cp4.1LG06g06100 vs. TAIR10
Match: AT5G20240.1 (AT5G20240.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 245.4 bits (625), Expect = 3.2e-65
Identity = 128/207 (61.84%), Postives = 163/207 (78.74%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIEN++NR VT+SKRRNG++KKAKEITVLCDA+V+L++FAS+GKM +YC P
Sbjct: 1   MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           S  L  +LD+Y K SGK+LWDAKHENLSNE+DR+KKEND++Q+ELR L+GEDI SLN K 
Sbjct: 61  SMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKN 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGY 180
           LMA+E A+E+GL  VR+ Q E++   R NE+MM EE ++L ++L Q+EM        N  
Sbjct: 121 LMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQEMAI----ASNAR 180

Query: 181 NQRMRDFNSQMPFAFRVQPIQPNLQER 208
              MRD + Q  F +RVQPIQPNLQE+
Sbjct: 181 GMMMRDHDGQ--FGYRVQPIQPNLQEK 201

[Close]

BLAST of Cp4.1LG06g06100 vs. TAIR10
Match: AT5G23260.2 (AT5G23260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-31
Identity = 73/172 (42.44%), Postives = 114/172 (66.28%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIK+IEN + RQVT+SKRR G+IKK +E+++LCDA + L+VF+++GK+ E+CS 
Sbjct: 1   MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSE 60

Query: 61  STPLIDILDKYHKQSGKRLWD--AKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNY 120
              +  ++D+Y   +G RL D     E L +EM+ +++E  N+++ LR   G D+ S+  
Sbjct: 61  QNRMPQLIDRYLHTNGLRLPDHHDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPP 120

Query: 121 KELMALEEALENGLTGVREKQSELMKMMRTN----ERMMEEENKRLNYELYQ 167
            EL  LE  LE+ +  VRE+++ELM+    N     RM+EE+N  +   L++
Sbjct: 121 NELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNNMYRWLHE 172

[Close]

BLAST of Cp4.1LG06g06100 vs. TAIR10
Match: AT3G54340.1 (AT3G54340.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 127.5 bits (319), Expect = 9.7e-30
Identity = 73/183 (39.89%), Postives = 114/183 (62.30%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           M RGKI+IKRIEN +NRQVTYSKRRNG+ KKA E+TVLCDA+VS+++F+SS K+HEY SP
Sbjct: 1   MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           +T   +I+D Y   S   +W  ++E +     ++ + N N++ ++++  GE +  L+ +E
Sbjct: 61  NTTTKEIVDLYQTISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQE 120

Query: 121 LMALEEALENGLTGVREKQ----SELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV 180
           L  LE+ +EN    VRE++       ++  +   +  ++  K L +EL  +        V
Sbjct: 121 LRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNLIHELELRAEDPHYGLV 180

[Close]

BLAST of Cp4.1LG06g06100 vs. TAIR10
Match: AT5G15800.2 (AT5G15800.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 7.7e-27
Identity = 74/173 (42.77%), Postives = 113/173 (65.32%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA+V+L++F++ GK++E+CS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 60

Query: 61  STPLIDILDKYHKQSGKRL----WDAKH-ENLSNEMDRVKKENDNMQIELRRLRGEDITS 120
           S+ ++  LD+Y K S   +      AK  EN   E  ++K   +N+Q + R L GED+  
Sbjct: 61  SSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGP 120

Query: 121 LNYKELMALEEALENGLTGVREKQSELM----KMMRTNERMMEEENKRLNYEL 165
           LN KEL  LE  L+  L  VR  +++ M      ++  E+M+ E N+ L  +L
Sbjct: 121 LNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNKEQMLLETNRALAMKL 172

[Close]

BLAST of Cp4.1LG06g06100 vs. TAIR10
Match: AT1G24260.2 (AT1G24260.2 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 115.5 bits (288), Expect = 3.8e-26
Identity = 70/176 (39.77%), Postives = 115/176 (65.34%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRG++E+KRIEN  NRQVT++KRRNG++KKA E++VLCDA+V+L++F++ GK++E+CS 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS- 60

Query: 61  STPLIDILDKYHK------QSGKRLWDAKHENLSNEMD--RVKKENDNMQIELRRLRGED 120
           S+ ++  L++Y K      +      +A    LS++ +  ++K+  D +Q   R L GED
Sbjct: 61  SSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGED 120

Query: 121 ITSLNYKELMALEEALENGLTGVREKQSELM----KMMRTNERMMEEENKRLNYEL 165
           +  L+ KEL +LE  L++ L  +R  +++ M      +++ ERM+ E NK L   L
Sbjct: 121 LGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRLRL 175

[Close]

BLAST of Cp4.1LG06g06100 vs. NCBI nr
Match: gi|793418639|ref|NP_001292651.1| (floral homeotic protein PMADS 2 [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104
Identity = 201/210 (95.71%), Postives = 203/210 (96.67%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---D 180
           LMALEEALENGLTGVREKQSE MKMMRTNERMMEEENKRLNYELYQKEMVAMGD V   D
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 210

[Close]

BLAST of Cp4.1LG06g06100 vs. NCBI nr
Match: gi|659086972|ref|XP_008444207.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 383.6 bits (984), Expect = 2.1e-103
Identity = 199/210 (94.76%), Postives = 202/210 (96.19%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---D 180
           LM+LEEALENGLTGVREKQSE MKMMRTNERMMEEENKRLNYELYQKEMVAMGD V   D
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTNERMMEEENKRLNYELYQKEMVAMGDSVREMD 217

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
            GYNQRMRDFNSQMPFAFRVQPIQPN QER
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQER 247

[Close]

BLAST of Cp4.1LG06g06100 vs. NCBI nr
Match: gi|778694283|ref|XP_011653776.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 350.9 bits (899), Expect = 1.5e-93
Identity = 186/210 (88.57%), Postives = 188/210 (89.52%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 61  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---D 180
           LMALEEALENGLTGVREKQSE MKMMRTN               YQKEMVAMGD V   D
Sbjct: 121 LMALEEALENGLTGVREKQSEFMKMMRTN---------------YQKEMVAMGDSVREMD 180

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
            GYNQRMRDFNSQMPFAFRVQPIQPNLQER
Sbjct: 181 IGYNQRMRDFNSQMPFAFRVQPIQPNLQER 195

[Close]

BLAST of Cp4.1LG06g06100 vs. NCBI nr
Match: gi|659086974|ref|XP_008444208.1| (PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 2.2e-92
Identity = 184/210 (87.62%), Postives = 187/210 (89.05%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLV+FASSGKMHEYCSP
Sbjct: 38  MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVIFASSGKMHEYCSP 97

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           STPL+DILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELR LRGEDITSLNYKE
Sbjct: 98  STPLVDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRHLRGEDITSLNYKE 157

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGV---D 180
           LM+LEEALENGLTGVREKQSE MKMMRTN               YQKEMVAMGD V   D
Sbjct: 158 LMSLEEALENGLTGVREKQSEFMKMMRTN---------------YQKEMVAMGDSVREMD 217

Query: 181 NGYNQRMRDFNSQMPFAFRVQPIQPNLQER 208
            GYNQRMRDFNSQMPFAFRVQPIQPN QER
Sbjct: 218 IGYNQRMRDFNSQMPFAFRVQPIQPNPQER 232

[Close]

BLAST of Cp4.1LG06g06100 vs. NCBI nr
Match: gi|315418856|gb|ADU15475.1| (PI [Actinidia chinensis])

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-86
Identity = 162/207 (78.26%), Postives = 190/207 (91.79%), Query Frame = 1


Query: 1   MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAQVSLVVFASSGKMHEYCSP 60
           MGRGKIEIKRIE+SSNRQVTYSKRRNGI+KKAKEI+VLCDA+VSLV+FASSGKMHEYCSP
Sbjct: 1   MGRGKIEIKRIEHSSNRQVTYSKRRNGILKKAKEISVLCDAKVSLVIFASSGKMHEYCSP 60

Query: 61  STPLIDILDKYHKQSGKRLWDAKHENLSNEMDRVKKENDNMQIELRRLRGEDITSLNYKE 120
           ST L+DILDKYHKQSGKRLWDAKHENLSNE+DR+KKEND+MQIELR L+GEDITSL++KE
Sbjct: 61  STTLVDILDKYHKQSGKRLWDAKHENLSNELDRIKKENDSMQIELRHLKGEDITSLHHKE 120

Query: 121 LMALEEALENGLTGVREKQSELMKMMRTNERMMEEENKRLNYELYQKEMVAMGDGVDNGY 180
           LMALEEALENGL+G+REKQ E+ KMM+ NE+M+E+ENK LN+ L+Q+ M      ++NGY
Sbjct: 121 LMALEEALENGLSGIREKQMEVFKMMKKNEKMLEDENKHLNFMLHQQGMTMESREMENGY 180

Query: 181 NQRMRDFNSQMPFAFRVQPIQPNLQER 208
           +QR+RD+  QMPFAF VQPIQPNLQ+R
Sbjct: 181 HQRVRDYQHQMPFAFHVQPIQPNLQDR 207

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g06100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MADS2_PETHY	8.2e-79	71.09	Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1	[more]
GLOB_ANTMA	1.7e-76	67.76	Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1	[more]
GLOB_TOBAC	1.0e-73	67.14	Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1	[more]
FBP1_PETHY	2.4e-70	66.82	Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1	[more]
PIST_ARATH	5.7e-64	61.84	Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1	[more]

BLAST of Cp4.1LG06g06100 vs. TrEMBL


Match Name	E-value	Identity	Description
Q9ZTQ9_CUCSA	1.0e-104	95.71	MADS box protein 26 OS=Cucumis sativus GN=CUM26 PE=2 SV=1	[more]
F4ZKM3_ACTCH	1.3e-86	78.26	PI OS=Actinidia chinensis PE=2 SV=1	[more]
F1BWT4_9ERIC	4.8e-86	79.81	MADS domain transcription factor OS=Camellia japonica GN=GLO1 PE=2 SV=1	[more]
A0A0C5BV63_9ERIC	6.3e-86	79.81	MADS domain transcription factor GLOBOSA-like protein mRNA OS=Camellia oleifera ...	[more]
A0A068B128_CAMSI	2.4e-85	79.33	MADS-box transcription factor GLOBOSA-like protein OS=Camellia sinensis GN=GLO1 ...	[more]

BLAST of Cp4.1LG06g06100 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G20240.1	3.2e-65	61.84	K-box region and MADS-box transcription factor family protein	[more]
AT5G23260.2	2.3e-31	42.44	K-box region and MADS-box transcription factor family protein	[more]
AT3G54340.1	9.7e-30	39.89	K-box region and MADS-box transcription factor family protein	[more]
AT5G15800.2	7.7e-27	42.77	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	3.8e-26	39.77	K-box region and MADS-box transcription factor family protein	[more]

BLAST of Cp4.1LG06g06100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|793418639\|ref\|NP_001292651.1\|	1.5e-104	95.71	floral homeotic protein PMADS 2 [Cucumis sativus]	[more]
gi\|659086972\|ref\|XP_008444207.1\|	2.1e-103	94.76	PREDICTED: floral homeotic protein PMADS 2 isoform X1 [Cucumis melo]	[more]
gi\|778694283\|ref\|XP_011653776.1\|	1.5e-93	88.57	PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis sativus]	[more]
gi\|659086974\|ref\|XP_008444208.1\|	2.2e-92	87.62	PREDICTED: floral homeotic protein PMADS 2 isoform X2 [Cucumis melo]	[more]
gi\|315418856\|gb\|ADU15475.1\|	1.8e-86	78.26	PI [Actinidia chinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002487	TF_Kbox
IPR002100	TF_MADSbox

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription from RNA polymerase II promoter
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g06100.1	Cp4.1LG06g06100.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 1.3E-28coord: 23..38 score: 1.3E-28coord: 3..23 score: 1.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 8.4
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 7.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 32
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..96 score: 6.93
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 82..163 score: 1.4
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 84..170 score: 14
None	No IPR available	unknown	Coil	Coil	coord: 77..111 score: -coord: 135..155 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..209 score: 4.6E
None	No IPR available	PANTHER	PTHR11945:SF97	FLORAL HOMEOTIC PROTEIN PISTILLATA	coord: 2..209 score: 4.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG06g06100	CmaCh09G007680	Cucurbita maxima (Rimu)	cmacpeB060
Cp4.1LG06g06100	CmaCh01G013650	Cucurbita maxima (Rimu)	cmacpeB503
Cp4.1LG06g06100	CmoCh09G007600	Cucurbita moschata (Rifu)	cmocpeB034
Cp4.1LG06g06100	CmoCh01G014180	Cucurbita moschata (Rifu)	cmocpeB461
Cp4.1LG06g06100	Cla023193	Watermelon (97103) v1	cpewmB776
Cp4.1LG06g06100	Csa4G358770	Cucumber (Chinese Long) v2	cpecuB784
Cp4.1LG06g06100	MELO3C010515	Melon (DHL92) v3.5.1	cpemeB730
Cp4.1LG06g06100	ClCG11G016000	Watermelon (Charleston Gray)	cpewcgB695
Cp4.1LG06g06100	CSPI04G17540	Wild cucumber (PI 183967)	cpecpiB786
Cp4.1LG06g06100	Lsi04G018380	Bottle gourd (USVL1VR-Ls)	cpelsiB639
Cp4.1LG06g06100	MELO3C010515.2	Melon (DHL92) v3.6.1	cpemedB863
Cp4.1LG06g06100	CsaV3_4G028010	Cucumber (Chinese Long) v3	cpecucB0971
Cp4.1LG06g06100	Bhi09G002277	Wax gourd	cpewgoB0998
Cp4.1LG06g06100	CsGy4G016730	Cucumber (Gy14) v2	cgybcpeB564
Cp4.1LG06g06100	Carg20085	Silver-seed gourd	carcpeB1455
Cp4.1LG06g06100	Carg00312	Silver-seed gourd	carcpeB0947

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG06g06100	Cp4.1LG02g03120	Cucurbita pepo (Zucchini)	cpecpeB468

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG06g06100	Cucumber (Chinese Long) v3	cpecucB0973
Cp4.1LG06g06100	Cucumber (Chinese Long) v3	cpecucB0978
Cp4.1LG06g06100	Wax gourd	cpewgoB0979
Cp4.1LG06g06100	Cucurbita pepo (Zucchini)	cpecpeB229
Cp4.1LG06g06100	Cucumber (Chinese Long) v2	cpecuB790
Cp4.1LG06g06100	Cucumber (Gy14) v2	cgybcpeB566
Cp4.1LG06g06100	Cucumber (Gy14) v2	cgybcpeB570
Cp4.1LG06g06100	Cucumber (Gy14) v2	cgybcpeB869