CsaV3_4G004790 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTGGAGAGTGCATACTCCAACTCAAAAACTAAATGAATCTATTTTAATAAATATAGAGATTAAAATGGTATATTTTGGAAACTTTTTTAAGTACAAAAACAAACAAATTCTTCAAAATTTAAGGATTGAAAAGGTAATATTATATATAATACACTAAGTTTAATAGAGAGTAAAATAATTGAAGGTACAAAATGTGATTAAAACATAGGTAGTTCAAATTTGTTTAACTTAATTAAACACAACAAATAGTTAATAGCGCACCTCGATCTCATCGTTCTCTCAACTGCAACGCCAATGCGTATAGGTTGGATTTCCCAAATTGAATTTTCATAAATTCACAATCCTTCTTTCCTACCTTTCCCACTTCCTTTGAATTCTCCGCTTTTCTTTCACTTCAATGGCTGCCACTTCCCATTCTCTCTTCTCCTTCACCAATTCTCAATCTCTCAACAAGCCCACTTCCCTTCTTCCTCCCACTAGCTCTAAATCCCTCTTCAGATCCCCCTCTCTCTCTTTTCGCTCCAACTCTCTTCCCGCTATCCGCTGTTCTCTCAACAATGCCGACGATCCCATTGAGAAAAGTAACCTCCTTTCTCTCTACTTTCAAATGGGGTTTTGTTCTTCTTACTCTTTCTGTTGCTGATTTCACTTTTTTTTTCTCTCTTCTTTTCAGAGTTTGCATCGTTTCCTACTGTTATGGATATCAACGAGATTCGTAAAATTTTGCCTCACAGGTATTTGTTGAACTTCGTGTGTTTTTGTGTGTATGGGGGTTTGACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTCTACTTATGCATTGTGATTTATGTTGATGTAGGTTTCCGATTCTTTTAGTAGATAGAGTTATTGAATACAATCCTGGAGTCTCGGTTGTTGCTATTAAGAATGTCACTATAAATGAGAGTTTCTTTCCAGGGCACTTCCCTGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGTATGTTCTTAAGCTTGAAGTTGATTTTTGTGGACTGAGATGATATTGTCGAACTGTTTACTATTTATTCAAATGAACTCTGAATGAATTGTTTAATTAGAATCACTGGTACTAACACCAGAAAAAAAACAATCAAAGTTAACAAATTTATGATTTATATGGATTTTTTAAAATTTTTATTTTTGTTAATAACAACTTTCATTGAGATAAAAATGATAGAATACACATGCATAACAAAAAGGAGTGGAGCTAAAAGAAGGGACTCCAACTACATAAAATAGGAACTATGCATTTATATGCTAAAAAAATAAGTGATGTGCTTTTGTATCGTACTTGTTTTTTCCTATGTTATTTTGTGTTTACATAGTGTAAAGATTTAGAATGAGGATCTCTTTGCTTCATCCAAAGGGTGACAAACAGATGAGATTAAGAGTAATGAAGCGATCCTATGGGAAGACAACTTCCCATCCAAATGCTGCCATCATGTCATTGGCCTGGTCCCAAGATACATATTGATCAGGTAATATCGAGCTTTGAGGGTTGTGTCCTCATACTGGAGGAGGTTAATGATAGAATGGGTCCATGAACTTTGGGCAAGTAAACCAGATGGTTATTAACTATTAAAAAAGGCTTCGTCTTGATGAATAATAGGCTTTGCTGATGAAAGGAAACACACCTCGGTTGGAATAAATCCGCTCAAAGTCTATTTTTTTTCCATTTTCCCCCCAAATTCATTCTGGTTAGGATCTTGCTCGAAGTTTCAAGAAATCCACCAGACATCACTGTAAATTGTGAAATTACCTAACCTACTTATTTGAAGTATACTGTAAGGGAATTAATAGGAGTTTATGGCTAGGAGTAATATGGTATTAGTAACATAAGGGTAGTTAGTAGGGACTTAGTGTATCTAGTTTTAAATAAGGGGGAAGGGGATTGAGGGAAGACAAGCAATTGTTGAGTGATTTAGGGCTTTGGTTAACATACTCAAGAGGGGGACGTTCCAAGTGCCTTGATTTATTTTGTAGTTCTTCATCCTATATGTTTTGACATATTTCAGATCTCCTGTTAGGTGGCATCCTGAAAAATACTTGCACGAGTTTCTCGTCTCAAGCTCTAGACAAGCTTAGAAACGTTTGAATTTTAACATGAAACTAATTCTCTTTTAATTTCTAATTGACACCTATCAATGGTCATAGATTATTGCATTGCAATTAGGACTTTTTGGGAGTCAGAATTTCTCAAACGTGGTTTGACTATGCAAGGATCTTTTTGCTAGTTTTATCGTCTATCGAGAGGAGGAAGCTTCTCAAACAAGATTGGAAGCCATGGAAGGATGGAGGATGAATTCCTTTTGCGTTTGTTGACTACTTCAATGAAGAGATTAAATCCTATTTAGCTTGAGAATCTTTTTACTCATGGAAAATATTTCATCTACCGTTGCCATTAATGAATAGTTTGTGAACTGTGAATTCTTGCCAAATTTGGAGGATTGGGTTGATTATGCATGGAGTTTTCTGATAGGTTGCCACTAGACTTCTTTAGTGAATTAGCCAATATGTTGTTGATTTGTTGCTTATTAATACATGATTGGGATTCTTAAGTGTTAATACTTCGATGGGGCATTTAGAGAACTGAATGATCAATTAATTTTGGTTATTTCAAATTTTGTAGTCCTGCCATTGATGAAAATGCCCAACATCAGGTAAATGTTTTAGAGCTGCTTGTGCGTTACCAGCTTATTGCTAAGTTGCAAGCTGTATGAGATGTTCTTTTGCTCTTTACCAAATTGCGTAGTTTAGGACGTATAAATGAGTTGACAGGGTATCTGCAGGTCTTACCAAAATTAAGGCAATGGTAAAGTGAACCTCCTAAGTCCCAAGGACATGATTATTTTGGGTCTTATAGGCTACTCCTGCATGTTAATTGCCAAAGATTGAACTGCAGCTCTGGCCTTGACCAAACAACCTAACAACAATAGCTTTCACCAAAATAGAAAAAGTGGGAGCTGCAATTTAGAATCTGAAGGTTGCTAATGAGCCTACAAGCACATATTAATGCTTTTCAAGGTACTAGACTAGGGGCTGTGTTGATGCAAGGACTGACCTTGACATAATATAACTGCTTTCTTACCTTGAGATGAGACATCAATTCTCATCCTATGAGAGCGAATTGATGACTATTGTGTGTTAGTTCAGGAATGGAACCCTTATCTGCGTGAGCGCAAGTTTATCATCTGGAAGTTTGCTTGACCAAGGTACTATAAAGTGGAGACTAACCGTTGGATTACAAAACTGATGGATTATGCTTTTGACATTCAAGGCAGACTTGGTTTAATAACTTAAAAGGCCAATTTCATTGAGGACAAAATGAAAGAATACAATAGGTTAAAAAAACAAAGCCCCACAAATGAGCGCACCCTAAAGAAAGAGGCTATAAATCCAGCAAAAGAAGTCCTAGTGAATAGTTAGAAAAAAAAAAACTTGTCATCGATGCCCAAAGGGAGACATTAAATCTTCCAAGGGACGAAAATGCTGCTGATGCTTTATTAAGACATCTTGTTGAACCAAAATACAAGTTCACTGTTAATCTCGGGCGAGTAGAATGGAGAGATTATAAAGGTTCCTATTGATGAAAATGAGGAGCTTAAACAAATGAAGCAATTTATTATTAAACATGAATAACATATTTCTTGGCTTTCATTAGGCCAAAATCTTCTCTAGTATAACGGTTGGTTAGTCCTTTCTCATGCATAATAGTACACCCATTTACTATTTACTTCTCAATAATTTTCACAAGATCTCTTAAAACTGGAACGGATTTTTTTGTCATTGTGATACTTAATAGTCATGTTATAAAGCTCTATCATTGCTTGGTTTGTAGGCAATGGCTCAAACTGGCGGTATAGTTATGCTGCAACCAGATGTGGGAGGCTCTCGTGAAAATTTCTTCTTTGTCGGTATTGATAAAGTGAGGTTCCGAAAGCCAGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTTGGAATTGCCAAAATGGAAGGAAAGGCATACGTTGGAGGGGATGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGCAAAGAAGAATAAAAGTATTTTTCTACTATATCTGTTGTTATGATATGATGCTCGATGTTGTGATTTGTTTCTTATTTTTTTGGGATAAAAATTTGAGAGTTAGGATTCTGCACATCTAGGAATAACTGTTTGATATTATGCTTCACTATTTATCTGTGGATTTCATTGAGAAGCAGCAATCAATCTTATGGTCTTCTTC ATGGCTGCCACTTCCCATTCTCTCTTCTCCTTCACCAATTCTCAATCTCTCAACAAGCCCACTTCCCTTCTTCCTCCCACTAGCTCTAAATCCCTCTTCAGATCCCCCTCTCTCTCTTTTCGCTCCAACTCTCTTCCCGCTATCCGCTGTTCTCTCAACAATGCCGACGATCCCATTGAGAAAAAGTTTGCATCGTTTCCTACTGTTATGGATATCAACGAGATTCGTAAAATTTTGCCTCACAGGTTTCCGATTCTTTTAGTAGATAGAGTTATTGAATACAATCCTGGAGTCTCGGTTGTTGCTATTAAGAATGTCACTATAAATGAGAGTTTCTTTCCAGGGCACTTCCCTGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAACTGGCGGTATAGTTATGCTGCAACCAGATGTGGGAGGCTCTCGTGAAAATTTCTTCTTTGTCGGTATTGATAAAGTGAGGTTCCGAAAGCCAGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTTGGAATTGCCAAAATGGAAGGAAAGGCATACGTTGGAGGGGATGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGCAAAGAAGAATAA ATGGCTGCCACTTCCCATTCTCTCTTCTCCTTCACCAATTCTCAATCTCTCAACAAGCCCACTTCCCTTCTTCCTCCCACTAGCTCTAAATCCCTCTTCAGATCCCCCTCTCTCTCTTTTCGCTCCAACTCTCTTCCCGCTATCCGCTGTTCTCTCAACAATGCCGACGATCCCATTGAGAAAAAGTTTGCATCGTTTCCTACTGTTATGGATATCAACGAGATTCGTAAAATTTTGCCTCACAGGTTTCCGATTCTTTTAGTAGATAGAGTTATTGAATACAATCCTGGAGTCTCGGTTGTTGCTATTAAGAATGTCACTATAAATGAGAGTTTCTTTCCAGGGCACTTCCCTGAGAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAACTGGCGGTATAGTTATGCTGCAACCAGATGTGGGAGGCTCTCGTGAAAATTTCTTCTTTGTCGGTATTGATAAAGTGAGGTTCCGAAAGCCAGTGATCGCAGGAGACACGTTGGTCATGCGAATGACTCTTGTCAAGTTGCAGAAGAAGTTTGGAATTGCCAAAATGGAAGGAAAGGCATACGTTGGAGGGGATGTTGTCTGCGAAGGTGAGTTCTTGATGGCCATGGGCAAAGAAGAATAA MAATSHSLFSFTNSQSLNKPTSLLPPTSSKSLFRSPSLSFRSNSLPAIRCSLNNADDPIEKKFASFPTVMDINEIRKILPHRFPILLVDRVIEYNPGVSVVAIKNVTINESFFPGHFPERPIMPGVLMVEAMAQTGGIVMLQPDVGGSRENFFFVGIDKVRFRKPVIAGDTLVMRMTLVKLQKKFGIAKMEGKAYVGGDVVCEGEFLMAMGKEE
BLAST of CsaV3_4G004790 vs. NCBI nr
Match: XP_004149140.1 (PREDICTED: uncharacterized protein LOC101207195 [Cucumis sativus] >KGN53227.1 hypothetical protein Csa_4G029990 [Cucumis sativus]) HSP 1 Score: 422.5 bits (1085), Expect = 8.3e-115 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. NCBI nr
Match: XP_008453782.1 (PREDICTED: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [Cucumis melo]) HSP 1 Score: 406.4 bits (1043), Expect = 6.2e-110 Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. NCBI nr
Match: XP_022982573.1 (uncharacterized protein LOC111481409 [Cucurbita maxima]) HSP 1 Score: 362.8 bits (930), Expect = 7.8e-97 Identity = 185/224 (82.59%), Postives = 196/224 (87.50%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. NCBI nr
Match: XP_023513624.1 (uncharacterized protein LOC111778171 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 360.1 bits (923), Expect = 5.1e-96 Identity = 183/224 (81.70%), Postives = 195/224 (87.05%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. NCBI nr
Match: XP_022942061.1 (uncharacterized protein LOC111447250 [Cucurbita moschata]) HSP 1 Score: 359.8 bits (922), Expect = 6.6e-96 Identity = 183/224 (81.70%), Postives = 194/224 (86.61%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TAIR10
Match: AT5G10160.1 (Thioesterase superfamily protein) HSP 1 Score: 286.6 bits (732), Expect = 1.3e-77 Identity = 156/222 (70.27%), Postives = 174/222 (78.38%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TAIR10
Match: AT2G22230.1 (Thioesterase superfamily protein) HSP 1 Score: 276.9 bits (707), Expect = 1.0e-74 Identity = 149/215 (69.30%), Postives = 169/215 (78.60%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. Swiss-Prot
Match: sp|Q8DI01|FABZ_THEEB (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=fabZ PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 5.6e-38 Identity = 76/143 (53.15%), Postives = 107/143 (74.83%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. Swiss-Prot
Match: sp|P73848|FABZ_SYNY3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=fabZ PE=3 SV=2) HSP 1 Score: 158.7 bits (400), Expect = 7.3e-38 Identity = 82/150 (54.67%), Postives = 105/150 (70.00%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. Swiss-Prot
Match: sp|Q2JTA0|FABZ_SYNJA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=fabZ PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.8e-37 Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. Swiss-Prot
Match: sp|Q3MH14|FABZ_ANAVT (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=fabZ PE=3 SV=2) HSP 1 Score: 156.4 bits (394), Expect = 3.6e-37 Identity = 85/160 (53.12%), Postives = 109/160 (68.12%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. Swiss-Prot
Match: sp|B0JIT3|FABZ_MICAN (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=fabZ PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 6.2e-37 Identity = 75/144 (52.08%), Postives = 102/144 (70.83%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TrEMBL
Match: tr|A0A0A0KXT9|A0A0A0KXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 5.5e-115 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TrEMBL
Match: tr|A0A1S3BWK3|A0A1S3BWK3_CUCME (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Cucumis melo OX=3656 GN=LOC103494410 PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 4.1e-110 Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TrEMBL
Match: tr|A0A2P5CW73|A0A2P5CW73_PARAD (Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118190 PE=3 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.4e-81 Identity = 167/220 (75.91%), Postives = 183/220 (83.18%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TrEMBL
Match: tr|A0A061DQI0|A0A061DQI0_THECC (Thioesterase superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_046682 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80 Identity = 162/222 (72.97%), Postives = 181/222 (81.53%), Query Frame = 0
BLAST of CsaV3_4G004790 vs. TrEMBL
Match: tr|A0A2I4H3V2|A0A2I4H3V2_9ROSI (uncharacterized protein LOC109013246 OS=Juglans regia OX=51240 GN=LOC109013246 PE=3 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 4.4e-80 Identity = 165/220 (75.00%), Postives = 178/220 (80.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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