CmaCh16G006840 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGAAGGCCGATGCGAATGGGTTGGATTTGTGCTCTTTTTCAGCTTTAAACTACTCTCTCTAATCGTTCATTCCTTCCCACACCTTCGTTCCCACCGTCTTTCAGAGCTTCCCCCCATCCCCAACAATGGCGGCCCTTTCCACTTCTCTCTTCTCCTTCACCCACACTCAATGCCCCGACAAACCCTCTATTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCGCTCCAATTCGCTTCCCACTTTCCGGTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAAGTAGATGCTCCCATCGAAAAGAGTAAGCTCCTCTCTCCAATTTCAAATCGTGGGGTTTTTGTCGTTTTTCTCTTTGTAGCTGATTTGATTTGATTTGATTTGATTCTGTGCTCAGAGTTTCCATCTTTTCCCACTGTCATGGATATCAATGAGATTCGTAATATCTTGCCCCACAGGTATTTGTTATATTGTTCCTCTGTTTGGGGTTTTGGAGATTCTTGGATTTTATTCTTATACATATTGTGATTTTTTTGCTTTTGCTTAAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGGCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGTATCTTCTTAACCTTCAAATTATTCAACTGCTTACTATCTATTCAAAATGAACTCTCGATGAATTCATGAACTGTTCTCATGGTTGATGCAAGTTCTAAACCACTTCAAATGTTATGTATCGCCCATGTTCATATGAGAAAAAAAGAAATGTAAAATCTGCAAATTGTGTAGATGAGCTATCATAGTGCAACTAGTACTGACTTCTAAGCTCTTCATTGATCCCAAAGCGATGGATTGAATCACATTGGTTGGAGAGGAGAACGAAGCATTTCTTATAAGAGTGTGTAAATCTCTTCCTTGTAAACGCGTTTTAAAATCTTGAGGGAAAGTCGGAAAGGAAAAACACAAAGAGGACAAATGGTATCATAGTCAGATACCAAACGGTGTGCCAGCGAGGACGCTAGGCCTCCAAACGGGGGTAGATTGTGAGATCCCACATTAGTTGGAGAGGAGAATGAGACACTCCCTAGTAAACACGTTTTAAAATATATGAAGGGAAAGCCCAAAAAGGACAATATCGGACTTAAGCTGTTACACGGTATTAACTGTCCATAACCGCAAAGATAGTTCAAGGAAGAACCTTTCTTTAGTCTTTTAGAAAGAACTCTAGCCACAGGAAAGAGCTGAGGCTAATGGGTCTATAGTCATGAACTGTGCGAGACTCCAATTTCTTTGGAATGAGGCATGTGTGTCTCGTTGAGCCTCATTGATAATCATGTTCTTAAAATATCTTGGAACGCTCTCATTGTGTCACTTTTAAGAAAGTTCCAATTTTTTTGAGAGATTTCAGCATAGATTCCATCAGGACCCGGGGAGTTTTTTAGTGCCTAATTCAGAAAACAGCATAGTAAATTTCTTACTCACTGTTACATTCAAGCTGTGAAGCTTAATGATCTGAAATATGGTCCTATTGATTAATATTAGGGAGAGTTCGTAATAGCCCAAGCCCACCGCTAACAGATATTGTCCGCTTTGGCCTGTTATGTATCGTCGTCAGCCTCACGGTTTTAAAACGCATCTACTAGGAAGAGGTTTCTACATGCTCATAAGGAATGCTTCATGCCCCTCTCCAACCGATGTGGGATCTCACAATCCACCCCCTTTGGGGGTCCAACGTCCTCACTGGCACACTTCACGGAACCTGCCTTTGATACCATTTGTAACAACCCAAGCCTAGAGCTAGCAGATATAGTCCTTTTGGCCCGTTACGTAACGCTGTTAGTCTCACAGTTTTAAAATGCGCCTACCCGGGATAGGTTTCCATACCCTCATAAGGAATGCTTTGTTTTCCTCTCCAACCGATGTGGGATCTCACGAGGTCCGACTAGCTATTGGTGAAAAAAGTGATGAAATCCCTCTCATTTTCAGCATCGGATAGGCTGCTTGTGCCATCGATTATTTGTCGGACACTCCTTTTTATTTCAGCATCGTTTGGTTAGACCTTACTCATGAATAACACATCCTTTTTATTTCTCAAAGAATTTCACAAGATCTTTTACTAGTATGAAGCTGTCATGACAGAGGACAGGTATAATCCTTGTGTGATGAAGATCTCCAAATATGATCTCCATGTTTTTATGATACTTAAATATAGTTGTTAATAAAGGTCTATGACATTGTTGGGTTTGTAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCGGAGGTGGGAGGCTCTCGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGCGAAGGCATACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGA GTGGGAAGGCCGATGCGAATGGGTTGGATTTGTGCTCTTTTTCAGCTTTAAACTACTCTCTCTAATCGTTCATTCCTTCCCACACCTTCGTTCCCACCGTCTTTCAGAGCTTCCCCCCATCCCCAACAATGGCGGCCCTTTCCACTTCTCTCTTCTCCTTCACCCACACTCAATGCCCCGACAAACCCTCTATTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCGCTCCAATTCGCTTCCCACTTTCCGGTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAAGTAGATGCTCCCATCGAAAAGAAGTTTCCATCTTTTCCCACTGTCATGGATATCAATGAGATTCGTAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGGCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCGGAGGTGGGAGGCTCTCGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGCGAAGGCATACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGA ATGGCGGCCCTTTCCACTTCTCTCTTCTCCTTCACCCACACTCAATGCCCCGACAAACCCTCTATTTCCCTCTTCAGATCTGCTTCCCTCTCTTTTCGCTCCAATTCGCTTCCCACTTTCCGGTGTTCTCTCAATACCGCCGTCCACGACGCACCCATTGAAGAAAAAGTAGATGCTCCCATCGAAAAGAAGTTTCCATCTTTTCCCACTGTCATGGATATCAATGAGATTCGTAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTAGATAGAGTGATCGAATACAATCCTGGGGTTTCCGCTGTTGCTATTAAGAATGTTACCATCAATGATAACTTCTTTCCAGGGCACTTCCCTGATAGACCCATCATGCCTGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGCGGTCTAGTTATGCTGCAACCGGAGGTGGGAGGCTCTCGCGACAACTTCTTCTTCGCTGGAATCGACAAAGTGAGGTTCCGAAAACCCGTGATCGCAGGAGACACATTGGTGATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTCGGAATTGCCAAAATGGAAGCGAAGGCATACGTCGGAGGCGAAGTCGTGTGCGAAGGTGAGTTCTTGATGGCCATGGGTAAAGAAGAATGA MAALSTSLFSFTHTQCPDKPSISLFRSASLSFRSNSLPTFRCSLNTAVHDAPIEEKVDAPIEKKFPSFPTVMDINEIRNILPHRFPFLLVDRVIEYNPGVSAVAIKNVTINDNFFPGHFPDRPIMPGVLMVEAMAQVGGLVMLQPEVGGSRDNFFFAGIDKVRFRKPVIAGDTLVMRMTLVKLQKKFGIAKMEAKAYVGGEVVCEGEFLMAMGKEE
BLAST of CmaCh16G006840 vs. Swiss-Prot
Match: FABZ_ANAVT (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fabZ PE=3 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 2.9e-39 Identity = 84/149 (56.38%), Postives = 109/149 (73.15%), Query Frame = 1
BLAST of CmaCh16G006840 vs. Swiss-Prot
Match: FABZ_SYNY3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabZ PE=3 SV=2) HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39 Identity = 84/146 (57.53%), Postives = 109/146 (74.66%), Query Frame = 1
BLAST of CmaCh16G006840 vs. Swiss-Prot
Match: FABZ_NOSS1 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=fabZ PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.0e-39 Identity = 84/149 (56.38%), Postives = 109/149 (73.15%), Query Frame = 1
BLAST of CmaCh16G006840 vs. Swiss-Prot
Match: FABZ_THEEB (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) GN=fabZ PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 6.5e-39 Identity = 79/144 (54.86%), Postives = 111/144 (77.08%), Query Frame = 1
BLAST of CmaCh16G006840 vs. Swiss-Prot
Match: FABZ_MICAN (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) GN=fabZ PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 3.2e-38 Identity = 78/148 (52.70%), Postives = 107/148 (72.30%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TrEMBL
Match: A0A0A0KXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 5.1e-91 Identity = 179/224 (79.91%), Postives = 189/224 (84.38%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TrEMBL
Match: K4B276_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80 Identity = 159/221 (71.95%), Postives = 182/221 (82.35%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TrEMBL
Match: A0A0B2RJU5_GLYSO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Glycine soja GN=glysoja_005557 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80 Identity = 158/190 (83.16%), Postives = 171/190 (90.00%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TrEMBL
Match: I1MDV8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G052500 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.8e-80 Identity = 158/190 (83.16%), Postives = 171/190 (90.00%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TrEMBL
Match: M1AXW2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012564 PE=3 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 2.4e-80 Identity = 158/221 (71.49%), Postives = 182/221 (82.35%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TAIR10
Match: AT2G22230.1 (AT2G22230.1 Thioesterase superfamily protein) HSP 1 Score: 293.1 bits (749), Expect = 1.4e-79 Identity = 158/208 (75.96%), Postives = 172/208 (82.69%), Query Frame = 1
BLAST of CmaCh16G006840 vs. TAIR10
Match: AT5G10160.1 (AT5G10160.1 Thioesterase superfamily protein) HSP 1 Score: 292.0 bits (746), Expect = 3.1e-79 Identity = 155/220 (70.45%), Postives = 179/220 (81.36%), Query Frame = 1
BLAST of CmaCh16G006840 vs. NCBI nr
Match: gi|659107646|ref|XP_008453782.1| (PREDICTED: uncharacterized protein LOC103494410 [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 2.5e-91 Identity = 179/225 (79.56%), Postives = 189/225 (84.00%), Query Frame = 1
BLAST of CmaCh16G006840 vs. NCBI nr
Match: gi|449462824|ref|XP_004149140.1| (PREDICTED: uncharacterized protein LOC101207195 [Cucumis sativus]) HSP 1 Score: 342.0 bits (876), Expect = 7.4e-91 Identity = 179/224 (79.91%), Postives = 189/224 (84.38%), Query Frame = 1
BLAST of CmaCh16G006840 vs. NCBI nr
Match: gi|764516304|ref|XP_011465763.1| (PREDICTED: uncharacterized protein LOC101308816 [Fragaria vesca subsp. vesca]) HSP 1 Score: 309.7 bits (792), Expect = 4.1e-81 Identity = 158/216 (73.15%), Postives = 179/216 (82.87%), Query Frame = 1
BLAST of CmaCh16G006840 vs. NCBI nr
Match: gi|1021495177|ref|XP_016190602.1| (PREDICTED: 3-hydroxyacyl-[acyl-carrier-protein]) HSP 1 Score: 308.5 bits (789), Expect = 9.0e-81 Identity = 162/211 (76.78%), Postives = 178/211 (84.36%), Query Frame = 1
BLAST of CmaCh16G006840 vs. NCBI nr
Match: gi|969999452|ref|XP_015083135.1| (PREDICTED: 3-hydroxyacyl-[acyl-carrier-protein]) HSP 1 Score: 307.4 bits (786), Expect = 2.0e-80 Identity = 158/221 (71.49%), Postives = 182/221 (82.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|