CmoCh04G008600 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCAAAATTTCAATGTGAATTGGACCTTATCAGTTATGGTTTTAATTAGTCCAACCAAGAACACGTTAGCGTTCACTTGTCCACATGACCGAAGCGTGCAGGGTGGATTTGAGCGCTTTTTCAAATTTGCCCCAACCTCCTCACCCCAACTCTCCAACATCATAAACTCCTCTTGCTTTGAACTCTCCGCTCACAGTTTCCTCTCATCCCCATCAATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATGTTCCCATTGAAAAGAGTAAGCTCTCTTTCTAATTTGAAATTGAGGGGTTTTCTTGTTTTTTTCTTATCTGATTTCATTCTCTCCTCAGGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTATTCGTTAAAATTCCTTGTGTGTTTGTGAGTGTATGGGGTTTTGAAGATTCTTGTATTTCTTTCTTATGCATTGTGTTTTGTTCTGCTGTAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGTAATTTCTAAAGCTTTAAACTGAAATTTTGGGATTAAGTGGAATTGTTCATCTGTTTACTCTCTGTGAAATGAACTCTTTTTGAATTTATGAATTATAATTACAAACAGCTAAAACTTTTAATATTTGGATAGAAATGGAGTGGTGAGTGATACTAAGACTGGGGTTTGGATGTCAGTGAACTATGCACCCCGCCTTCATGGAGTAAAAGGGAAGTCCGATATATATATATATATATATATTTTTTTTCCCTACTCTGATTGGAGAAAAGTAAAGTCTTTGAATGCAGTTGAAGCATGTAAATTGAATTATTGAAGCTGTAAGCAAAAATTATGGGAGTTAGTGGGATGGGGACTAATCTCGTGGTCTTTATTTGAGTTTGTTAGTTGTTAATTTGTAGTTGGGTGCAGTTTTTAATTAGCTTTCGTAGTTGGGTTTCTCGTTGACCAATAAATCTTTGATCGAAAATTAATGGGGTTTTGCATGTGTTTCTTGAAACATGATCTTTATTTGAGTTTGTTAGTTGTTAATTTTTTAATGATAAAGAAACTAACCCTTCATTGATAAAGGAGGCCAGCCGAATAACAACCCAACTACGAAAACCAAAAATGTTTCCTAGTTGAAGAACTTTTTGGAAACTGACTTGCACTATTTCTGTGTCACTGTGATATTACACAACCTCTTCATTCAGAGATAACCTGCATGAGTCTGCCTTGTTTCAAGGACAAGCTCAGAAATGTTTCCTAGTGTTGAACACGAACCAATCCTCCTCTGATTAGTACCTAAAGATGGTAATAGATTGTAGCAATCGGGAATTTTTGGAGTCAGAACTTCTCAAACGTGGTTTAACTATTCACAGGAGGAAACTTCTCGCACAAGGTTGGAAATTGGAAGGATTCTTTCTTGGTTTAGTTGATGATCATATAGGACCTAAGAACATGAAGGATGAATTCTTTTAGCGTTGATGAAGAGGATGAAATCCAATTGTGCTTGAGAATCTTTTCACTTATCTGCGAAATGTTTCATTTACTGTTTCTTTTGATGAATATTTTGTGAACTGTTTTGAGAAATTACTAATTGTTTGAGAACAGTTATCTTTGCACTTGGTTGCAGTTTTGCCACAAATGGAAATTAGGGTGGATTGGTTGACTGTGAAGAGAGGTTTTTTCTTTTTTGATAAATTAGTCTGTATAGAGGATTTGCAGCTTATTAGTATATAGTTGGGATATCAGTGTTAATACTCTGATGAGGCATTTAGAGAATAGGGTAGATCAGTTATTTCGGTCATTTCAAATTTTACAGCCCCGCTGTTCAGGTACGTGCGCATCATTTCGTAAATGTTTTAGAGGTGGTTGTGAGTACCATCTTATTGCCAACTGAATGAAACGTTCTTTTGTTCTCTACCAAATTGAGTAGCTTAGGACATATGATTTGGTATCCACAGACCCTTCCGACATTAAGGCAATGGTAAAGTGACCCTCACCTAAGTCACCTTGAACGGATGCTAGCTTTTTTTACCTTATAGGCTAGTCCTGCAAGTTTGTTGCCAAGAAGGGAACGTTGCTCTAGCCTTGACCAAACAAGTTAGAAAGGATAGTTTTCACCAAAATCATGAAGTTGAAACTGTCGCTTAGAATTTGAAGGTTGCTATGAGCCTATGATTGCGTTTCTAGTACTACCCCCAGGCTTTGGATCTTGATATCTTAGTAGCTTCTAAGATAGAATCTTATTTGAGTATCTTATTTGTGCTCATATTTAGTTTTTGAAATGGGTTATCTTATCTGTAACTACGTGAAGTCGTCTGTAAATAAATTCTATCTACCGTAGAGTTTTGCATTTCGGTGTCTCCATGTATATTCTCCTTGCATCCTCTCGATTTTGTTTTTCATGCTCTTCATATAGATCGAGTGTCTGAGTTGAGTGAATCTAACGAGGGCTGTGTTGATGCGAGGAGAAGACCTTAGTATATTATAATCACTTTCTCCCATTGAAATGAGACATCACTGTCAGAACAGGGGACCTGTGTGTCCATCCTTCATTCATTAATATCCCTAGATATGATCTCCTTGTTGTTATAGTACATAAAGCTCTCTCAATGCTCGGTTTGCAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGA TCAAAATTTCAATGTGAATTGGACCTTATCAGTTATGGTTTTAATTAGTCCAACCAAGAACACGTTAGCGTTCACTTGTCCACATGACCGAAGCGTGCAGGGTGGATTTGAGCGCTTTTTCAAATTTGCCCCAACCTCCTCACCCCAACTCTCCAACATCATAAACTCCTCTTGCTTTGAACTCTCCGCTCACAGTTTCCTCTCATCCCCATCAATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATGTTCCCATTGAAAAGAGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGA ATGGTTTTAATTAGTCCAACCAAGAACACGTTAGCGTTCACTTGTCCACATGACCGAAGCGTGCAGGGTGGATTTGAGCGCTTTTTCAAATTTGCCCCAACCTCCTCACCCCAACTCTCCAACATCATAAACTCCTCTTGCTTTGAACTCTCCGCTCACAGTTTCCTCTCATCCCCATCAATGGCTGCCACCTCCAATTCGCTCATCTCCTTCACCAATTCTCCATCTCTGAACAAACCCAGATGCTTCCTTCCTCCACCAGCCTCTGTTTCCTTCTTCAGATCTCCTTCTCTCTCTTTTCCTTCCAATAAGCTTCCCACTGTCCGCTGCTCTCTCAATGCCGACGTCCACGCCGATCCCATTGAAGGGAAACTAGATGTTCCCATTGAAAAGAGGTTTCCTGCTTTTCCTACTGTCATGGATATCAATGAGATTCGCAATATCTTGCCCCACAGGTTCCCGTTTCTTTTAGTGGATAGAGTGATTGAATACAATCCTGGGGTTTCGGCGGTTGCTATAAAGAATGTTACCATTAATGATAACTTTTTTCCTGGGCACTTCCCCGAAAGACCCATCATGCCCGGTGTTCTCATGGTTGAGGCAATGGCTCAAGTAGGTGGTCTGGTTATGCTGCAACCAGAAGTAGGAGGCTCTCGCGACAATTTCTTCTTCGCTGGAATTGACAAAGTAAGGTTCCGCAAACCCGTGATCGCGGGGGACACATTGGTCATGCGAATGACTCTTGTTAAGTTGCAGAAGAAGTTTGGAATTGCGAAAATGGAAGGGAAGGCATACGTCGGAGGCGAAGTCGTGTGTGAAGGAGAGTTCTTGATGGCCATGGGCAAGGAAGAATGA
BLAST of CmoCh04G008600 vs. Swiss-Prot
Match: FABZ_SYNY3 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabZ PE=3 SV=2) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-39 Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 1
BLAST of CmoCh04G008600 vs. Swiss-Prot
Match: FABZ_THEEB (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Thermosynechococcus elongatus (strain BP-1) GN=fabZ PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.7e-39 Identity = 80/144 (55.56%), Postives = 112/144 (77.78%), Query Frame = 1
BLAST of CmoCh04G008600 vs. Swiss-Prot
Match: FABZ_MICAN (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Microcystis aeruginosa (strain NIES-843) GN=fabZ PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.9e-39 Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = 1
BLAST of CmoCh04G008600 vs. Swiss-Prot
Match: FABZ_ANAVT (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=fabZ PE=3 SV=2) HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38 Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of CmoCh04G008600 vs. Swiss-Prot
Match: FABZ_NOSS1 (3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=fabZ PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 4.3e-38 Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TrEMBL
Match: A0A0A0KXT9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G029990 PE=3 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 8.2e-97 Identity = 183/224 (81.70%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TrEMBL
Match: A0A061DQI0_THECC (Thioesterase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_046682 PE=3 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85 Identity = 172/227 (75.77%), Postives = 186/227 (81.94%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TrEMBL
Match: A0A0B2R4J2_GLYSO ((3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Glycine soja GN=glysoja_011329 PE=3 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.8e-83 Identity = 171/226 (75.66%), Postives = 183/226 (80.97%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TrEMBL
Match: C6TL39_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.8e-83 Identity = 171/226 (75.66%), Postives = 183/226 (80.97%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TrEMBL
Match: D7TRA9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0357g00020 PE=3 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82 Identity = 168/223 (75.34%), Postives = 177/223 (79.37%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TAIR10
Match: AT2G22230.1 (AT2G22230.1 Thioesterase superfamily protein) HSP 1 Score: 304.7 bits (779), Expect = 6.0e-83 Identity = 163/221 (73.76%), Postives = 179/221 (81.00%), Query Frame = 1
BLAST of CmoCh04G008600 vs. TAIR10
Match: AT5G10160.1 (AT5G10160.1 Thioesterase superfamily protein) HSP 1 Score: 301.6 bits (771), Expect = 5.1e-82 Identity = 162/224 (72.32%), Postives = 176/224 (78.57%), Query Frame = 1
BLAST of CmoCh04G008600 vs. NCBI nr
Match: gi|449462824|ref|XP_004149140.1| (PREDICTED: uncharacterized protein LOC101207195 [Cucumis sativus]) HSP 1 Score: 361.7 bits (927), Expect = 1.2e-96 Identity = 183/224 (81.70%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of CmoCh04G008600 vs. NCBI nr
Match: gi|659107646|ref|XP_008453782.1| (PREDICTED: uncharacterized protein LOC103494410 [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 2.2e-95 Identity = 183/225 (81.33%), Postives = 193/225 (85.78%), Query Frame = 1
BLAST of CmoCh04G008600 vs. NCBI nr
Match: gi|590707461|ref|XP_007048011.1| (Thioesterase superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 324.7 bits (831), Expect = 1.6e-85 Identity = 172/227 (75.77%), Postives = 186/227 (81.94%), Query Frame = 1
BLAST of CmoCh04G008600 vs. NCBI nr
Match: gi|764516304|ref|XP_011465763.1| (PREDICTED: uncharacterized protein LOC101308816 [Fragaria vesca subsp. vesca]) HSP 1 Score: 319.7 bits (818), Expect = 5.1e-84 Identity = 166/223 (74.44%), Postives = 180/223 (80.72%), Query Frame = 1
BLAST of CmoCh04G008600 vs. NCBI nr
Match: gi|358248728|ref|NP_001239930.1| (uncharacterized protein LOC100790839 [Glycine max]) HSP 1 Score: 315.5 bits (807), Expect = 9.7e-83 Identity = 171/226 (75.66%), Postives = 183/226 (80.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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