CsaV3_3G004390 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCCTTAGTTTCTAACCCTCTTATTACCCATCCCACTCTTCCTCCTTCCACTACTTTTCCCCTCAAACCGCGCTCTAATTCCATCCATAATCGGAGACGAACACCCGCGTTTGCTGCCATTGACGGTGCTTCTTTGCTTCCAGCTGACTCCACTCAGGTTCAAATCACATGGCAAATTTTCGTTGGAGCGATTGGTAACAGCAATGTTTTTTTTTTTTTTTTTTATTATTATTATTATTTCTCTTGTTTCTTTTGATATGTTTTGTATCATCTATATTTGATCCGTTTTGATATTTGGTTGTAGCTGGAGTGACGCCCTTTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTGTGAGTTTTTTTTTTGGGACTTTTTCAAGTGATTTGTTGTTTCTTCTGTTTGTGTTTTCTTATCATTAGTGGAATTTAAAACTGTAGAGGGTGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCCGAATGTGGTAATAGTTCTTTTTTGTTGTAATTCTTCTTATTGTTAATCATTATGTTGAACTGAAAAAGTGTTGTTAATGAAATTTTGTGGAACAAAATCATAACAATTATGAAATTCATAGACAATATTCAAATGAGCAACTAAGTTTTTGTTTTTTTGTTTTTCCTTTTAAGTAAGTTAAAAGTACTTGATACTAATAATATGTTCATATTTTTTATATTATGTTACAATGGATATGTCAATTCACTTTGAATCTATGTTCATAGAGAAATGTCAACCATGGAAACTATACCTTGCTTATATTGAGGCTGCAAGATGCTGATTCCTTCCCCAAAATTTTAAAACATTTGTAAATATTTGGACGTTTTAATTTTAAACGGCCTATTTCTTCTTATGTTAAGTATAGTTTCATGGCTTGTAAGCTTGTTATTAATCAATCATTTTGGTAAAGCACTAAACTGAGAATTCTTAACCAATAATTATTAAATTAGAAACAAGCTCATATAAAAAACATATAGATATTTAGCCGTAATGTTCCAACAGTATAGTTAGAAAAAAGAAAAATTATTCCAGGTAGAATATGACTGTGAGCTCCTTCCTTGTTCTTGACATTTATCGGTTGGACAGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGATAA ATGGAAGCCTTAGTTTCTAACCCTCTTATTACCCATCCCACTCTTCCTCCTTCCACTACTTTTCCCCTCAAACCGCGCTCTAATTCCATCCATAATCGGAGACGAACACCCGCGTTTGCTGCCATTGACGGTGCTTCTTTGCTTCCAGCTGACTCCACTCAGGTTCAAATCACATGGCAAATTTTCGTTGGAGCGATTGCTGGAGTGACGCCCTTTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTAGGGTGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCCGAATGTGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGATAA ATGGAAGCCTTAGTTTCTAACCCTCTTATTACCCATCCCACTCTTCCTCCTTCCACTACTTTTCCCCTCAAACCGCGCTCTAATTCCATCCATAATCGGAGACGAACACCCGCGTTTGCTGCCATTGACGGTGCTTCTTTGCTTCCAGCTGACTCCACTCAGGTTCAAATCACATGGCAAATTTTCGTTGGAGCGATTGCTGGAGTGACGCCCTTTGTGGTGGCCGGAATCGAATTCAGCAAGAGAATTAGGGTGCAAAAGAGATGTAAAGAATGTGGTGGTTCGGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCCGAATGTGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGATAA MEALVSNPLITHPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPADSTQVQITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECGGFLPWQSWRRFFWG
BLAST of CsaV3_3G004390 vs. NCBI nr
Match: XP_004149576.1 (PREDICTED: uncharacterized protein LOC101220311 [Cucumis sativus] >KGN56051.1 hypothetical protein Csa_3G061530 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 9.9e-68 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. NCBI nr
Match: XP_008449071.1 (PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]) HSP 1 Score: 229.2 bits (583), Expect = 7.9e-57 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. NCBI nr
Match: XP_022935718.1 (uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022936477.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937262.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937933.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022938581.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_023540549.1 uncharacterized protein LOC111800877 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 2.2e-43 Identity = 99/136 (72.79%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. NCBI nr
Match: XP_023005598.1 (uncharacterized protein LOC111498537 [Cucurbita maxima] >XP_023005599.1 uncharacterized protein LOC111498537 [Cucurbita maxima]) HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43 Identity = 99/136 (72.79%), Postives = 105/136 (77.21%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. NCBI nr
Match: XP_023540547.1 (uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.1 bits (453), Expect = 9.4e-42 Identity = 99/139 (71.22%), Postives = 105/139 (75.54%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TAIR10
Match: AT5G55570.1 (unknown protein) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 52/76 (68.42%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TrEMBL
Match: tr|A0A0A0L7H1|A0A0A0L7H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 6.6e-68 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TrEMBL
Match: tr|A0A1S3BLU9|A0A1S3BLU9_CUCME (uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.2e-57 Identity = 110/125 (88.00%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TrEMBL
Match: tr|B9SST3|B9SST3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0047320 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.3e-31 Identity = 76/132 (57.58%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TrEMBL
Match: tr|A0A061F474|A0A061F474_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030732 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30 Identity = 69/126 (54.76%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of CsaV3_3G004390 vs. TrEMBL
Match: tr|V7BD19|V7BD19_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G275600g PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30 Identity = 65/97 (67.01%), Postives = 74/97 (76.29%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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