ClCG10G004590 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG10G004590
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	WGS project CAID00000000 data, contig chromosome 12
Location	CG_Chr10 : 5792488 .. 5794663 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACACAGCCATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGGTAATGGGAATGATTTTCGATTATTTGTGTAGTTTCTTTTGATTTTTTTATTATCGAAATCTGATCGGTGGATTGGGATTTTGGTGTCTGATGTTGGTTGAAGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGAGTTTTTGGGGCTTTTTCAAGTGATTGGTTTGCTTTGTTCTGTTTGTGTTTTCTTAGCATTATTGGAATTCAAAATTTTAGGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTATTTCTGTTCATAATTTAGGGATAGATTTTTTGAAGTGTTTCTATAACCATTGTTAGATGTGAGAAATACACCCTTAACCAAGGATAGAGGTTTGTTTGAATTTGAATCATCATCTCGACATGTTGATGAACTGAAAAAAAAGTGTTGTCGATGAATATTTGTGGAAAAAAACATATTAAATATTTAAATGAACAAATAAGCGATCAATTTTAACCTTCATTTAGGTAAAGCATTAAATTGGAAATTGTCAACCAATAGTGATTAAATTGAAAAGAAATACTTATAAAGAATATATAAATATTTAGCCATAATGTTCTAACACTTTATTCGAAGAAAAATGGAAAATGACAAAATCCACCCCTGAACACAACTATGGTGGTAGTAACAATTGAACTTTCAATGGAAAAAATTAGACACTTGTACTTCTAAAAGTGTAAAAATTAAACTCTCAAATTTCAATAAATGTAATAGTCAAACCCCTCAATCTCTCATAGATGTTAAAATTGAACCCTCAAACTTTAATTTCCCTTTCTCTCTCTACCTTCCACACCTCTCTCCCTTGGTCATTCTCTTCCCTTGTATCACCCACCCAATCCTCTCTCCATCGGCACTCTCTCAGATCTCCCTCATCTCCTTCAGTTATTGGTTGATTAGCTTAATCAGTACTTTGGTATTGTGTAACCTTGCTGGAAACTAAAAAGAGTACGGCCTAAGGCTAACATAAGCTGTAAACAATGTTAAAAAAGAAACTAAAAAGCTTTAATTGGTTTGGTTTAGTTTTCTAGTGGCCATTATATAGCAAAACCAGCAGTAGCAAGATCGCCAGGTGTGAAAAATGAAAATAATGTTTTAATTCCCAGCCGTCTGATTTCAGGACCTTTCAAGTTTCAACCACTGCCTACTGTCCAACCTCCTCTTCCATTTCAATTTTAGCCTAAAAAAACTAGAGTGCCGAGGGAGAAAGGGGCTGGATGGGTGATTGAAGGGAAGCGAACGACCGTGAAATGGAGAGATTAAAGAAAGAAATTGAGTAAAATAGATTTAATTTTCACATTTACGAGAGATTGAGGGTTGATTTTGACATTTATTAAAGTTTGAAGATTGATTTTTTATTTGAGGGGTACAATTTTTTATATATACATATATACACACACATACATACATACATATATACACACACATATATATACGTACATTTTAGGTAGAGTATGACTGTGATTCTTCCTTGTTTTTGACGTTTATTGGTTGGACAGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAGCATGATATGTCTCTTTTGAAAGCTGTATAATTCCACATATTTCAAAGAAAGTGGTTCAGGATCTTCTTTGTTGATTTCCAGGCAAGACGAGCAACAAAGGAAGCAATCCATTCGTTAAGTGTATGTATTTGAGGTATAGAACTATTTACAAGTTCACCAAGTTTCTTATTAATTACATGCTCAATCAAATGTTTAAATGTTGCTAAATGATTGTTTTGTGGTTATATATCCATAGCATACATAGTTTTTATAACCCTTTTCTCCCTCAACATAGTTTATAAC

mRNA sequence

CAACACAGCCATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAGCATGATATGTCTCTTTTGAAAGCTGTATAATTCCACATATTTCAAAGAAAGTGGTTCAGGATCTTCTTTGTTGATTTCCAGGCAAGACGAGCAACAAAGGAAGCAATCCATTCGTTAAGTGTATGTATTTGAGGTATAGAACTATTTACAAGTTCACCAAGTTTCTTATTAATTACATGCTCAATCAAATGTTTAAATGTTGCTAAATGATTGTTTTGTGGTTATATATCCATAGCATACATAGTTTTTATAACCCTTTTCTCCCTCAACATAGTTTATAAC

Coding sequence (CDS)

ATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAG

Protein sequence

MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECGNSFFLHTEVVFCHGSHGGDSFGAKEDS

Homology

[Close]

BLAST of ClCG10G004590 vs. TrEMBL
Match: A0A0A0L7H1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G061530 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-37
Identity = 90/120 (75.00%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASLA-AD 60
           MEAL    +SN L       +PTL  S T PLKP S SI NRRRT  FAAIDGASL  AD
Sbjct: 1   MEAL----VSNPLIT-----HPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRCPECG
Sbjct: 61  STQVQITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

[Close]

BLAST of ClCG10G004590 vs. TrEMBL
Match: B9SST3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0047320 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.6e-27
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 8   SISNALFPLAPTPNPTLRRSNTSPLKPPSIS----IQNRRRTAIFAAIDGASLAADPSQV 67
           ++S++L   +P    TL R+      P S      I+NR+ T   AA++  S AAD  QV
Sbjct: 4   AVSSSLILTSPLNTKTLSRNRVITGYPKSTRTFRLIKNRKLTTTIAAVNEVSAAADSGQV 63

Query: 68  EITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
           E+TWQI VGA+AGVTPFVVAGIEFSKRI+AQ+RC+ CGG+GLV+R+ DYFRCP CG
Sbjct: 64  EVTWQIIVGAVAGVTPFVVAGIEFSKRIIAQRRCEICGGAGLVMREKDYFRCPGCG 119

[Close]

BLAST of ClCG10G004590 vs. TrEMBL
Match: A0A0D2Q382_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G096500 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-25
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 1


Query: 7   LSISNALFPLAPTPN--PTLRRSNTSPLKPPSIS-----IQNRRR--TAIFAAIDGASLA 66
           L IS +L P    P   PT  R +   +K  SI      I+N +R  T + A I   S+ 
Sbjct: 5   LCISPSLTPPVSLPQSKPTFTRYSNPTVKVTSIQRCKSLIRNSQRLTTKVAANIHDVSVV 64

Query: 67  ADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPE 120
           ADP++V+ITWQI VGA+AGVTPF+VAGIEFSKRI+AQ+RC EC GSGLV R +DYF+CPE
Sbjct: 65  ADPARVDITWQIVVGALAGVTPFIVAGIEFSKRIIAQRRCGECRGSGLVFRGNDYFKCPE 124

[Close]

BLAST of ClCG10G004590 vs. TrEMBL
Match: D7T880_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01750 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-25
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 1


Query: 26  RSNTSPLKPPSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGI 85
           +S  S +   ++  ++RR+TA  + ++  S  ADP+QVE+TWQI VGA+AGVTPF+VAGI
Sbjct: 29  KSAVSFISRSNLLRKSRRQTARVSVVNDVSAVADPAQVEVTWQIVVGALAGVTPFIVAGI 88

Query: 86  EFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
           EFSKRIVAQKRC  CGGSGLVLRD  YFRCP CG
Sbjct: 89  EFSKRIVAQKRCGVCGGSGLVLRDKYYFRCPGCG 122

[Close]

BLAST of ClCG10G004590 vs. TrEMBL
Match: A0A151QXQ0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_043889 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-25
Identity = 64/122 (52.46%), Postives = 83/122 (68.03%), Query Frame = 1


Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQN--RRRTAIFAA-IDGASLA 60
           MEA+   S+S        T +   R  + +P K   + +++  RRRT + A  ++  +  
Sbjct: 1   MEAVAASSLSMLSLGSMKTRSRVTRNCHVTPRKGCDVWVKSGRRRRTRVGAVNVEDVTTV 60

Query: 61  ADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPE 120
            D + VE+TWQI VG IAGVTPFVVAGIEFSKRI+AQKRC+ECGGSGLVLR+ +YFRCPE
Sbjct: 61  LDRAPVEVTWQIVVGTIAGVTPFVVAGIEFSKRIIAQKRCEECGGSGLVLREKEYFRCPE 120

[Close]

BLAST of ClCG10G004590 vs. TAIR10
Match: AT5G55570.1 (AT5G55570.1 unknown protein)

HSP 1 Score: 110.9 bits (276), Expect = 6.6e-25
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 1


Query: 37  ISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKR 96
           +++ NRR     A  + A   A+  + EITWQI VG IAG+ PFVVAG+EFSKRI+AQKR
Sbjct: 47  MTMSNRRLKTTSALSELADTVAETGKSEITWQIIVGTIAGIIPFVVAGVEFSKRIIAQKR 106

Query: 97  CKECGGSGLVLRDDDYFRCPECG 120
           C+ECGG+GLV RD  YFRCPECG
Sbjct: 107 CEECGGTGLVSRDKKYFRCPECG 129

[Close]

BLAST of ClCG10G004590 vs. NCBI nr
Match: gi|449463713|ref|XP_004149576.1| (PREDICTED: uncharacterized protein LOC101220311 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37
Identity = 90/120 (75.00%), Postives = 94/120 (78.33%), Query Frame = 1


Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASLA-AD 60
           MEAL    +SN L       +PTL  S T PLKP S SI NRRRT  FAAIDGASL  AD
Sbjct: 1   MEAL----VSNPLIT-----HPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRCPECG
Sbjct: 61  STQVQITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

[Close]

BLAST of ClCG10G004590 vs. NCBI nr
Match: gi|659096394|ref|XP_008449071.1| (PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 9.2e-37
Identity = 91/120 (75.83%), Postives = 96/120 (80.00%), Query Frame = 1


Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGAS-LAAD 60
           MEAL    ISN L       +PTLRRS     KP S S+ NRRRT  FAAIDGAS LAAD
Sbjct: 1   MEAL----ISNPLIT-----HPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QVEITWQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRCP+CG
Sbjct: 61  STQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCG 106

[Close]

BLAST of ClCG10G004590 vs. NCBI nr
Match: gi|223531532|gb|EEF33363.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 8   SISNALFPLAPTPNPTLRRSNTSPLKPPSIS----IQNRRRTAIFAAIDGASLAADPSQV 67
           ++S++L   +P    TL R+      P S      I+NR+ T   AA++  S AAD  QV
Sbjct: 4   AVSSSLILTSPLNTKTLSRNRVITGYPKSTRTFRLIKNRKLTTTIAAVNEVSAAADSGQV 63

Query: 68  EITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
           E+TWQI VGA+AGVTPFVVAGIEFSKRI+AQ+RC+ CGG+GLV+R+ DYFRCP CG
Sbjct: 64  EVTWQIIVGAVAGVTPFVVAGIEFSKRIIAQRRCEICGGAGLVMREKDYFRCPGCG 119

[Close]

BLAST of ClCG10G004590 vs. NCBI nr
Match: gi|1000946818|ref|XP_015580768.1| (PREDICTED: uncharacterized protein LOC8277583 [Ricinus communis])

HSP 1 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 1


Query: 8   SISNALFPLAPTPNPTLRRSNTSPLKPPSIS----IQNRRRTAIFAAIDGASLAADPSQV 67
           ++S++L   +P    TL R+      P S      I+NR+ T   AA++  S AAD  QV
Sbjct: 4   AVSSSLILTSPLNTKTLSRNRVITGYPKSTRTFRLIKNRKLTTTIAAVNEVSAAADSGQV 63

Query: 68  EITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
           E+TWQI VGA+AGVTPFVVAGIEFSKRI+AQ+RC+ CGG+GLV+R+ DYFRCP CG
Sbjct: 64  EVTWQIIVGAVAGVTPFVVAGIEFSKRIIAQRRCEICGGAGLVMREKDYFRCPGCG 119

[Close]

BLAST of ClCG10G004590 vs. NCBI nr
Match: gi|802588588|ref|XP_012070970.1| (PREDICTED: uncharacterized protein LOC105633060 [Jatropha curcas])

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-26
Identity = 72/126 (57.14%), Postives = 86/126 (68.25%), Query Frame = 1


Query: 1   MEALPVLSISNALFPLAPT--PNPTLRRSNTSPLKPPSIS-----IQNRRRTAIFAAIDG 60
           MEA   LS S++L   +PT   + +LR  NT   K          I NRR T   AAI+ 
Sbjct: 1   MEA--ALSSSSSLLLTSPTNSKSKSLRHRNTLITKHSKSMANIRLIVNRRSTTKIAAIND 60

Query: 61  ASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYF 120
            S AAD  QVE+TWQI VGA AGVTPF+VAGIEFSKRI+AQ+RC+ CGGSGLV+R++DYF
Sbjct: 61  VSAAADLGQVEVTWQIVVGATAGVTPFIVAGIEFSKRIIAQRRCEVCGGSGLVVRENDYF 120

The following BLAST results are available for this feature:

BLAST of ClCG10G004590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7H1_CUCSA	1.7e-37	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G061530 PE=4 SV=1	[more]
B9SST3_RICCO	4.6e-27	55.17	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0047320 PE=4 SV=1	[more]
A0A0D2Q382_GOSRA	2.5e-25	54.92	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G096500 PE=4 SV=1	[more]
D7T880_VITVI	2.5e-25	62.77	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0090g01750 PE=4 SV=...	[more]
A0A151QXQ0_CAJCA	2.5e-25	52.46	Uncharacterized protein OS=Cajanus cajan GN=KK1_043889 PE=4 SV=1	[more]

BLAST of ClCG10G004590 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G55570.1	6.6e-25	61.45	unknown protein	[more]

BLAST of ClCG10G004590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463713\|ref\|XP_004149576.1\|	2.4e-37	75.00	PREDICTED: uncharacterized protein LOC101220311 [Cucumis sativus]	[more]
gi\|659096394\|ref\|XP_008449071.1\|	9.2e-37	75.83	PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo]	[more]
gi\|223531532\|gb\|EEF33363.1\|	6.6e-27	55.17	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000946818\|ref\|XP_015580768.1\|	6.6e-27	55.17	PREDICTED: uncharacterized protein LOC8277583 [Ricinus communis]	[more]
gi\|802588588\|ref\|XP_012070970.1\|	2.5e-26	57.14	PREDICTED: uncharacterized protein LOC105633060 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014900	VLTF-3_Zn_ribbon

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G004590.1	ClCG10G004590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014900	Viral late gene transcription factor 3 , zinc ribbon	PFAM	PF08792	A2L_zn_ribbon	coord: 94..122 score: 6.
None	No IPR available	PANTHER	PTHR36809	FAMILY NOT NAMED	coord: 37..146 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG10G004590	Csa3G061530	Cucumber (Chinese Long) v2	cuwcgB189
ClCG10G004590	MELO3C014132	Melon (DHL92) v3.5.1	mewcgB415
ClCG10G004590	Cla004490	Watermelon (97103) v1	wcgwmB057
ClCG10G004590	Cla97C10G189010	Watermelon (97103) v2	wcgwmbB038
ClCG10G004590	Bhi11G000390	Wax gourd	wcgwgoB080
ClCG10G004590	CSPI03G04390	Wild cucumber (PI 183967)	cpiwcgB190
ClCG10G004590	Cucsa.042300	Cucumber (Gy14) v1	cgywcgB018
ClCG10G004590	CmaCh06G006600	Cucurbita maxima (Rimu)	cmawcgB727
ClCG10G004590	CmoCh06G006690	Cucurbita moschata (Rifu)	cmowcgB730
ClCG10G004590	Lsi05G005210	Bottle gourd (USVL1VR-Ls)	lsiwcgB318
ClCG10G004590	MELO3C014132.2	Melon (DHL92) v3.6.1	medwcgB401
ClCG10G004590	Carg23557	Silver-seed gourd	carwcgB0008
ClCG10G004590	CsaV3_3G004390	Cucumber (Chinese Long) v3	cucwcgB194

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG10G004590	Silver-seed gourd	carwcgB0334
ClCG10G004590	Silver-seed gourd	carwcgB0572
ClCG10G004590	Watermelon (Charleston Gray)	wcgwcgB047
ClCG10G004590	Cucurbita maxima (Rimu)	cmawcgB285
ClCG10G004590	Cucurbita maxima (Rimu)	cmawcgB725
ClCG10G004590	Cucurbita maxima (Rimu)	cmawcgB730
ClCG10G004590	Cucurbita moschata (Rifu)	cmowcgB277
ClCG10G004590	Cucurbita moschata (Rifu)	cmowcgB280
ClCG10G004590	Cucurbita moschata (Rifu)	cmowcgB475
ClCG10G004590	Cucurbita moschata (Rifu)	cmowcgB733
ClCG10G004590	Wild cucumber (PI 183967)	cpiwcgB448
ClCG10G004590	Watermelon (97103) v1	wcgwmB079
ClCG10G004590	Cucurbita pepo (Zucchini)	cpewcgB194
ClCG10G004590	Cucurbita pepo (Zucchini)	cpewcgB249
ClCG10G004590	Cucurbita pepo (Zucchini)	cpewcgB766
ClCG10G004590	Cucurbita pepo (Zucchini)	cpewcgB778
ClCG10G004590	Bottle gourd (USVL1VR-Ls)	lsiwcgB038
ClCG10G004590	Cucumber (Gy14) v2	cgybwcgB174