Cla97C10G189010 (gene) Watermelon (97103) v2

NameCla97C10G189010
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionTransmembrane protein
LocationCla97Chr10 : 5098436 .. 5100319 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGGTAATGGGAATGATTTTCGATTATTTGTGTAGTTTCTTTTGATTTTTTTATTATCGAAATCTGATCGGTGGATTGGGATTTTGGTGTCTGATGTTGGTTGAAGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGAGTTTTTGGGGCTTTTTCAAGTGATTGGTTTGCTTTGTTCTGTTTGTGTTTTCTTAGCATTATTGGAATTCAAAATTTTAGGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTATTTCTGTTCATAATTTAGGGATAGATTTTTTGAAGTGTTTCTATAACCATTGTTAGATGTGAGAAATACACCCTTAACCAAGGATAGAGGTTTGTTTGAATTTGAATCATCATCTCGACATGTTGATGAACTGAAAAAAAAGTGTTGTCGATGAATATTTGTGGAAAAAAACATATTAAATATTTAAATGAACAAATAAGCGATCAATTTTAACCTTCATTTAGGTAAAGCATTAAATTGGAAATTGTCAACCAATAGTGATTAAATTGAAAAGAAATACTTATAAAGAATATATAAATATTTAGCCATAATGTTCTAACACTTTATTCGAAGAAAAATGGAAAATGACAAAATCCACCCCTGAACACAACTATGGTGGTAGTAACAATTGAACTTTCAATGGAAAAAATTAGACACTTGTACTTCTAAAAGTGTAAAAATTAAACTCTCAAATTTCAATAAATGTAATAGTCAAACCCCTCAATCTCTCATAGATGTTAAAATTGAACCCTCAAACTTTAATTTCCCTTTCTCTCTCTACCTTCCACACCTCTCTCCCTTGGTCATTCTCTTCCCTTGTATCACCCACCCAATCCTCTCTCCATCGGCACTCTCTCAGATCTCCCTCATCTCCTTCAGTTATTGGTTGATTAGCTTAATCAGTACTTTGGTATTGTGTAACCTTGCTGGAAACTAAAAAGAGTACGGCCTAAGGCTAACATAAGCTGTAAACAATGTTAAAAAAGAAACTAAAAAGCTTTAATTGGTTTGGTTTAGTTTTCTAGTGGCCATTATATAGCAAAACCAGCAGTAGCAAGATCGCCAGGTGTGAAAAATGAAAATAATGTTTTAATTCCCAGCCGTCTGATTTCAGGACCTTTCAAGTTTCAACCACTGCCTACTGTCCAACCTCCTCTTCCATTTCAATTTTAGCCTAAAAAAACTAGAGTGCCGAGGGAGAAAGGGGCTGGATGGGTGATTGAAGGGAAGCGAACGACCGTGAAATGGAGAGATTAAAGAAAGAAATTGAGTAAAATAGATTTAATTTTCACATTTACGAGAGATTGAGGGTTGATTTTGACATTTATTAAAGTTTGAAGATTGATTTTTTATTTGAGGGGTACAATTTTTTATATATACATATATACACACACATACATACATACATATATACACACACATATATATACGTACATTTTAGGTAGAGTATGACTGTGATTCTTCCTTGTTTTTGACGTTTATTGGTTGGACAGGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAG

mRNA sequence

ATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAG

Coding sequence (CDS)

ATGGAAGCTTTACCCGTACTCTCAATTTCTAACGCTCTCTTTCCATTAGCTCCCACTCCCAACCCGACTCTTCGTCGTTCCAATACTTCTCCCCTCAAACCGCCCTCAATTTCGATCCAAAATCGGAGACGAACAGCCATCTTTGCCGCCATTGACGGTGCTTCGCTTGCAGCCGACCCCTCTCAGGTCGAAATCACTTGGCAAATTTTCGTCGGAGCGATTGCTGGAGTGACTCCGTTTGTGGTGGCCGGAATCGAGTTCAGCAAGAGAATTGTGGCGCAGAAGAGATGTAAAGAATGTGGTGGTTCCGGGCTTGTTCTTAGAGATGATGACTACTTTCGTTGCCCTGAATGTGGTAATAGTTTCTTTTTGCATACTGAAGTGGTTTTTTGCCATGGCAGTCATGGAGGCGATTCTTTTGGGGCTAAAGAAGACAGTTAG

Protein sequence

MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECGNSFFLHTEVVFCHGSHGGDSFGAKEDS
BLAST of Cla97C10G189010 vs. NCBI nr
Match: XP_004149576.1 (PREDICTED: uncharacterized protein LOC101220311 [Cucumis sativus] >KGN56051.1 hypothetical protein Csa_3G061530 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 2.3e-36
Identity = 90/120 (75.00%), Postives = 94/120 (78.33%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGAS-LAAD 60
           MEAL    +SN L       +PTL  S T PLKP S SI NRRRT  FAAIDGAS L AD
Sbjct: 1   MEAL----VSNPLI-----THPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRCPECG
Sbjct: 61  STQVQITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

BLAST of Cla97C10G189010 vs. NCBI nr
Match: XP_008449071.1 (PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 5.2e-36
Identity = 91/120 (75.83%), Postives = 96/120 (80.00%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGA-SLAAD 60
           MEAL    ISN L       +PTLRRS     KP S S+ NRRRT  FAAIDGA SLAAD
Sbjct: 1   MEAL----ISNPLI-----THPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QVEITWQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRCP+CG
Sbjct: 61  STQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCG 106

BLAST of Cla97C10G189010 vs. NCBI nr
Match: XP_022935718.1 (uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022936477.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937262.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022937933.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022938581.1 uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_023540549.1 uncharacterized protein LOC111800877 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.4 bits (394), Expect = 7.5e-35
Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASL---A 60
           MEAL  L IS + F   PT N + R  +  PL   S S+  RRRT  FAAIDGASL   A
Sbjct: 1   MEAL--LPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAA 60

Query: 61  ADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPE 120
           ADP+QVEITWQI VGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRCPE
Sbjct: 61  ADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPE 120

BLAST of Cla97C10G189010 vs. NCBI nr
Match: XP_023005598.1 (uncharacterized protein LOC111498537 [Cucurbita maxima] >XP_023005599.1 uncharacterized protein LOC111498537 [Cucurbita maxima])

HSP 1 Score: 156.4 bits (394), Expect = 7.5e-35
Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASL---A 60
           MEAL  L IS + F   PT N + R  +  PL   S S+  RRRT  FAAIDGASL   A
Sbjct: 1   MEAL--LPISTSPFRFLPTANASPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAA 60

Query: 61  ADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPE 120
           ADP+QVEITWQI VGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRCPE
Sbjct: 61  ADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPE 120

BLAST of Cla97C10G189010 vs. NCBI nr
Match: XP_023540547.1 (uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 156.4 bits (394), Expect = 7.5e-35
Identity = 88/122 (72.13%), Postives = 93/122 (76.23%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGASL---A 60
           MEAL  L IS + F   PT N + R  +  PL   S S+  RRRT  FAAIDGASL   A
Sbjct: 1   MEAL--LPISTSPFRFPPTANTSPRPVSPFPLNLRSNSLNKRRRTPTFAAIDGASLAAAA 60

Query: 61  ADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPE 120
           ADP+QVEITWQI VGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVL D DYFRCPE
Sbjct: 61  ADPTQVEITWQIVVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLMDKDYFRCPE 120

BLAST of Cla97C10G189010 vs. TrEMBL
Match: tr|A0A0A0L7H1|A0A0A0L7H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.5e-36
Identity = 90/120 (75.00%), Postives = 94/120 (78.33%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGAS-LAAD 60
           MEAL    +SN L       +PTL  S T PLKP S SI NRRRT  FAAIDGAS L AD
Sbjct: 1   MEAL----VSNPLI-----THPTLPPSTTFPLKPRSNSIHNRRRTPAFAAIDGASLLPAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QV+ITWQIFVGAIAGVTPFVVAGIEFSKRI  QKRCKECGGSGLVLRDDDYFRCPECG
Sbjct: 61  STQVQITWQIFVGAIAGVTPFVVAGIEFSKRIRVQKRCKECGGSGLVLRDDDYFRCPECG 111

BLAST of Cla97C10G189010 vs. TrEMBL
Match: tr|A0A1S3BLU9|A0A1S3BLU9_CUCME (uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-36
Identity = 91/120 (75.83%), Postives = 96/120 (80.00%), Query Frame = 0

Query: 1   MEALPVLSISNALFPLAPTPNPTLRRSNTSPLKPPSISIQNRRRTAIFAAIDGA-SLAAD 60
           MEAL    ISN L       +PTLRRS     KP S S+ NRRRT  FAAIDGA SLAAD
Sbjct: 1   MEAL----ISNPLI-----THPTLRRS-----KPRSNSMHNRRRTPAFAAIDGASSLAAD 60

Query: 61  PSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
            +QVEITWQIFVGAIAGVTPFVVAGIEFSKRI+AQKRCKECGGSGLVLRDDDYFRCP+CG
Sbjct: 61  STQVEITWQIFVGAIAGVTPFVVAGIEFSKRIMAQKRCKECGGSGLVLRDDDYFRCPDCG 106

BLAST of Cla97C10G189010 vs. TrEMBL
Match: tr|B9SST3|B9SST3_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0047320 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 9.4e-26
Identity = 64/116 (55.17%), Postives = 82/116 (70.69%), Query Frame = 0

Query: 8   SISNALFPLAPTPNPTLRRSNTSPLKPPSIS----IQNRRRTAIFAAIDGASLAADPSQV 67
           ++S++L   +P    TL R+      P S      I+NR+ T   AA++  S AAD  QV
Sbjct: 4   AVSSSLILTSPLNTKTLSRNRVITGYPKSTRTFRLIKNRKLTTTIAAVNEVSAAADSGQV 63

Query: 68  EITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYFRCPECG 120
           E+TWQI VGA+AGVTPFVVAGIEFSKRI+AQ+RC+ CGG+GLV+R+ DYFRCP CG
Sbjct: 64  EVTWQIIVGAVAGVTPFVVAGIEFSKRIIAQRRCEICGGAGLVMREKDYFRCPGCG 119

BLAST of Cla97C10G189010 vs. TrEMBL
Match: tr|A0A2H5PR81|A0A2H5PR81_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_159970 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.7e-25
Identity = 60/86 (69.77%), Postives = 68/86 (79.07%), Query Frame = 0

Query: 39  IQNRRRTAIFAAIDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCK 98
           I NRR  A  AA +  S  ADP   E+TWQI VGAIAGVTPFVVAGIEFSKRI+AQ+RC+
Sbjct: 52  IGNRRLAAPSAASNDVSSVADPVTAEVTWQIIVGAIAGVTPFVVAGIEFSKRIIAQRRCE 111

Query: 99  ECGGSGLVLRDDDYFRCPECGNSFFL 125
            CGGSGLVLR+ DYF+CPECG S+ L
Sbjct: 112 VCGGSGLVLREKDYFKCPECGMSYGL 137

BLAST of Cla97C10G189010 vs. TrEMBL
Match: tr|A0A0S3RJ20|A0A0S3RJ20_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G022200 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.7e-25
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 0

Query: 42  RRRTAIFAA-IDGASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKEC 101
           RR   + AA ++      DP+ VE+TWQI VGAIAGVTPFVVAGIEF KRI+AQKRC+EC
Sbjct: 46  RRSVRVSAANVEDIITVFDPAPVEVTWQIVVGAIAGVTPFVVAGIEFRKRIIAQKRCEEC 105

Query: 102 GGSGLVLRDDDYFRCPECGNSFFLHTEVVFC 132
           GGSGLVLR+ +YFRCPECG   F  + V++C
Sbjct: 106 GGSGLVLREKEYFRCPECGMIAFTSSHVLYC 136

BLAST of Cla97C10G189010 vs. TAIR10
Match: AT5G55570.1 (unknown protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.4e-19
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0

Query: 54  ASLAADPSQVEITWQIFVGAIAGVTPFVVAGIEFSKRIVAQKRCKECGGSGLVLRDDDYF 113
           A   A+  + EITWQI VG IAG+ PFVVAG+EFSKRI+AQKRC+ECGG+GLV RD  YF
Sbjct: 64  ADTVAETGKSEITWQIIVGTIAGIIPFVVAGVEFSKRIIAQKRCEECGGTGLVSRDKKYF 123

Query: 114 R 115
           R
Sbjct: 124 R 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004149576.12.3e-3675.00PREDICTED: uncharacterized protein LOC101220311 [Cucumis sativus] >KGN56051.1 hy... [more]
XP_008449071.15.2e-3675.83PREDICTED: uncharacterized protein LOC103491051 [Cucumis melo][more]
XP_022935718.17.5e-3572.13uncharacterized protein LOC111442262 [Cucurbita moschata] >XP_022936477.1 unchar... [more]
XP_023005598.17.5e-3572.13uncharacterized protein LOC111498537 [Cucurbita maxima] >XP_023005599.1 uncharac... [more]
XP_023540547.17.5e-3572.13uncharacterized protein LOC111800877 isoform X1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
tr|A0A0A0L7H1|A0A0A0L7H1_CUCSA1.5e-3675.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061530 PE=4 SV=1[more]
tr|A0A1S3BLU9|A0A1S3BLU9_CUCME3.5e-3675.83uncharacterized protein LOC103491051 OS=Cucumis melo OX=3656 GN=LOC103491051 PE=... [more]
tr|B9SST3|B9SST3_RICCO9.4e-2655.17Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0047320 PE=4 SV=1[more]
tr|A0A2H5PR81|A0A2H5PR81_CITUN2.7e-2569.77Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_159970 PE=4 SV=1[more]
tr|A0A0S3RJ20|A0A0S3RJ20_PHAAN4.7e-2563.74Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.03G... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G55570.12.4e-1968.85unknown protein[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014900VLTF-3_Zn_ribbon
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0031072 heat shock protein binding
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C10G189010.1Cla97C10G189010.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014900Viral late gene transcription factor 3 , zinc ribbonPFAMPF08792A2L_zn_ribboncoord: 94..122
e-value: 6.3E-7
score: 28.9
NoneNo IPR availablePANTHERPTHR36809FAMILY NOT NAMEDcoord: 38..124