CsaV3_2G016010 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G016010
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCCR4-associated factor 1 like
Locationchr2 : 13267456 .. 13268358 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGATTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTAAAAAAAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGTCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

mRNA sequence

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGATTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTAAAAAAAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGTCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

Coding sequence (CDS)

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGATTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTAAAAAAAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGTCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

Protein sequence

MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Homology
[Close]
BLAST of CsaV3_2G016010 vs. NCBI nr
Match: XP_004147072.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_2G270190 [Cucumis sativus])

HSP 1 Score: 618.6 bits (1594), Expect = 1.1e-173
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300

[Close]
BLAST of CsaV3_2G016010 vs. NCBI nr
Match: XP_023533172.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.4 bits (864), Expect = 4.9e-89
Identity = 155/257 (60.31%), Postives = 203/257 (78.99%), Query Frame = 0 

Query: 12  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNV 71
           + PLIR+VWA N D EI R D CL  +++++IDTEFPG I ++P G+ID+ELY DF FNV
Sbjct: 11  DNPLIREVWAYNLDHEIIRLDRCLLSYSVMSIDTEFPGCIKRTPWGTIDEELYADFRFNV 70

Query: 72  NQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI 131
           NQTK+IQLG+T SD++G IGG+WEFNFSDFD E DAH+P +I FL+ NGLD  K+KKDGI
Sbjct: 71  NQTKVIQLGVTVSDEVGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDGI 130

Query: 132 PIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGI 191
            +  F  +FL  +RK  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG 
Sbjct: 131 QVRKFAIRFLYTIRKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFEWIVARRVGT 190

Query: 192 VRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGM 251
           VRDLKHMA+FCEGL+  G LGLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  
Sbjct: 191 VRDLKHMARFCEGLEG-GNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDF 250

Query: 252 NSKVCNGFLYGFSETLE 269
           N+++C+GFLYG S+  E
Sbjct: 251 NAEICDGFLYGLSKKFE 266

[Close]
BLAST of CsaV3_2G016010 vs. NCBI nr
Match: XP_022947867.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 332.8 bits (852), Expect = 1.2e-87
Identity = 161/270 (59.63%), Postives = 202/270 (74.81%), Query Frame = 0 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MG RN+ R  R  P I++VWASNFD EI R + CL+ + IL+IDTEFPG I  +P GSID
Sbjct: 1   MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           + +Y+D  FNVNQTKLIQLG+TASD+ GQ+ GSWEFNFSDFD + D  +P +I FLE NG
Sbjct: 61  ERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNG 120

Query: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD  K+KK GIP++ FT  F  I+R+  + +WVTFHGLYDIGYL+KAMG+   LP+SMEE
Sbjct: 121 LDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FA +V   VG+VRDLK +A++CEGL + GR+GLERLG+LL  KRFGMKH+AGSDSLLTA 
Sbjct: 181 FAEMVARGVGVVRDLKEVARWCEGL-EQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAF 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESM 271
            H +M   F + S+  +G LYG    L+ M
Sbjct: 241 VHAKMARWFRLESEAYDGHLYGLRNKLQYM 269

[Close]
BLAST of CsaV3_2G016010 vs. NCBI nr
Match: XP_022947868.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87
Identity = 154/259 (59.46%), Postives = 201/259 (77.61%), Query Frame = 0 

Query: 12  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNV 71
           + PLIR+VWA N D EI R D CL  ++I++IDTEFPG I ++P G+ D+ELY DF FNV
Sbjct: 11  DNPLIREVWAYNLDHEIIRLDRCLLSYSIMSIDTEFPGCIKRTPWGTFDEELYADFRFNV 70

Query: 72  NQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGI 131
           NQTK+IQLG+T SD+ G IGG+WEFNFSDFD E DAH+P +I FL+ NGLD  K+KKDGI
Sbjct: 71  NQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDGI 130

Query: 132 PIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGI 191
            +  F  +FL  L K  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG 
Sbjct: 131 KVRKFAIRFLYTLGKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFKWIVARRVGT 190

Query: 192 VRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGM 251
           VRDLKHMA+FCEGL+  G LGLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  
Sbjct: 191 VRDLKHMARFCEGLEG-GNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDF 250

Query: 252 NSKVCNGFLYGFSETLESM 271
           ++++C+GFLYG S+  E +
Sbjct: 251 HAEICDGFLYGLSKKFEEL 268

[Close]
BLAST of CsaV3_2G016010 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 330.5 bits (846), Expect = 6.0e-87
Identity = 166/300 (55.33%), Postives = 216/300 (72.00%), Query Frame = 0 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MG   +  S R    IR+VW+ NFD E+A  ++CL  + ILTIDTEFPGFI  +P G+I+
Sbjct: 1   MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIE 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           ++LY DF FNVN+TKLIQLG+TASD++G IG +WEFNFSDFD + D H+  ++ FL+ NG
Sbjct: 61  EKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNG 120

Query: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD  K+K+ GIPI  FT K   + RK  I RWVTFHGLYDIGYL+KAMG+   +P+SMEE
Sbjct: 121 LDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FA +V   +G V DLKHMA+FCEGL+D G+LGLE+L +L+N KRFG KH+AGSDSLLTAS
Sbjct: 181 FAELVERALGNVSDLKHMAQFCEGLED-GKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNI---LRFSLYIPCYFVFY 298
            + +M  +F + S+VC+GFLYG    L + K+K+   +    I   LR + Y PCY  +Y
Sbjct: 241 LYAKMKNQFELGSEVCDGFLYGLRIKLHA-KIKLYQNLMFGQIPYGLR-ACYPPCYIAYY 297

[Close]
BLAST of CsaV3_2G016010 vs. TAIR10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.7e-49
Identity = 104/256 (40.62%), Postives = 150/256 (58.59%), Query Frame = 0 

Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLDL+K++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]
BLAST of CsaV3_2G016010 vs. TAIR10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 3.4e-44
Identity = 97/219 (44.29%), Postives = 134/219 (61.19%), Query Frame = 0 

Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLDL+K++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]
BLAST of CsaV3_2G016010 vs. TAIR10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 92/231 (39.83%), Postives = 133/231 (57.58%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLDL K++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]
BLAST of CsaV3_2G016010 vs. TAIR10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 160.2 bits (404), Expect = 2.0e-39
Identity = 93/241 (38.59%), Postives = 137/241 (56.85%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+L K+ ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]
BLAST of CsaV3_2G016010 vs. TAIR10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 158.3 bits (399), Expect = 7.4e-39
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+L K++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match: sp|Q9SHJ0|CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-48
Identity = 104/256 (40.62%), Postives = 150/256 (58.59%), Query Frame = 0 

Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLDL+K++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match: sp|Q9LXM4|CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 6.2e-43
Identity = 97/219 (44.29%), Postives = 134/219 (61.19%), Query Frame = 0 

Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLDL+K++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match: sp|O64773|CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.7e-38
Identity = 92/231 (39.83%), Postives = 133/231 (57.58%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLDL K++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match: sp|Q9C6M9|CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.5e-38
Identity = 93/241 (38.59%), Postives = 137/241 (56.85%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+L K+ ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match: sp|Q9SFX6|CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.3e-37
Identity = 90/224 (40.18%), Postives = 131/224 (58.48%), Query Frame = 0 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+L K++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match: tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 7.3e-174
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300

[Close]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match: tr|A0A1S4E611|A0A1S4E611_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992290 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 131/153 (85.62%), Postives = 142/153 (92.81%), Query Frame = 0 

Query: 17  RQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKL 76
           RQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KL
Sbjct: 1   RQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKL 60

Query: 77  IQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIASF 136
           IQLGITAS+D GQIGGSWEFNFSDFDF+ D+HSP AIPFLE NGLD KK+KK GIPIASF
Sbjct: 61  IQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKNGLDFKKLKKYGIPIASF 120

Query: 137 TKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMG 170
           TKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMG
Sbjct: 121 TKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMG 153

[Close]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match: tr|A0A2H5NUC3|A0A2H5NUC3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076790 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 117/263 (44.49%), Postives = 161/263 (61.22%), Query Frame = 0 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  ++ NG+D  K+++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMQRNGMDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match: tr|V4S8J5|V4S8J5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013857mg PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 118/263 (44.87%), Postives = 160/263 (60.84%), Query Frame = 0 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDLKKMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  +  NGLD  K+++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMRSNGLDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match: tr|A0A1S3BY95|A0A1S3BY95_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494884 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 112/249 (44.98%), Postives = 162/249 (65.06%), Query Frame = 0 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           +R+VW  NF  E+A  ++ L    ++ +DTEFPGF+  +PRG+ ++  Y+D  FN+N  K
Sbjct: 4   VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLK 63

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEH-NGLDLKKMKKDGIPIA 135
           ++QLG+T  D+   +G SW F FSDFD + D  SP +I +L++  G + KK +KDGIP A
Sbjct: 64  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSA 123

Query: 136 SFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
            F + FLPI     I +W+TFHG+YD+ YL+K M +I  +P+SM EFA +    +G V D
Sbjct: 124 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-MIRTMPESMVEFAIIAQRHLGTVND 183

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           LKHM + CE L  +G LGL+RL +LLN+       N GSDSLL A A+ +M +    +S+
Sbjct: 184 LKHMIRNCEYL-MNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSE 243

Query: 256 VCNGFLYGF 264
           + +GFLYGF
Sbjct: 244 ITDGFLYGF 248

The following BLAST results are available for this feature:
BLAST of CsaV3_2G016010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147072.11.1e-173100.00PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN619... [more]
XP_023533172.14.9e-8960.31putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo][more]
XP_022947867.11.2e-8759.63putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata][more]
XP_022947868.12.1e-8759.46putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata][more]
XP_022146113.16.0e-8755.33putative CCR4-associated factor 1 homolog 8 [Momordica charantia][more]
BLAST of CsaV3_2G016010 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06450.12.7e-4940.63Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44240.13.4e-4444.29Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G61470.11.5e-3939.83Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G27890.12.0e-3938.59Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G27820.17.4e-3940.18Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CsaV3_2G016010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SHJ0|CAF1A_ARATH4.9e-4840.63Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9LXM4|CAF1H_ARATH6.2e-4344.29Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|O64773|CAF1E_ARATH2.7e-3839.83Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9C6M9|CAF1D_ARATH3.5e-3838.59Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9SFX6|CAF1C_ARATH1.3e-3740.18Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
BLAST of CsaV3_2G016010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA7.3e-174100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1[more]
tr|A0A1S4E611|A0A1S4E611_CUCME2.8e-7285.62putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992... [more]
tr|A0A2H5NUC3|A0A2H5NUC3_CITUN1.1e-5744.49Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076790 PE=4 SV=1[more]
tr|V4S8J5|V4S8J5_9ROSI1.5e-5744.87Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013857mg PE=4 ... [more]
tr|A0A1S3BY95|A0A1S3BY95_CUCME3.1e-5544.98putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR006941RNase_CAF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G016010.1CsaV3_2G016010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 19..134
e-value: 4.3E-7
score: 29.3
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 12..263
e-value: 8.5E-66
score: 223.7
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 14..267
NoneNo IPR availablePANTHERPTHR10797:SF16CCR4-ASSOCIATED FACTOR 1 HOMOLOG 1-RELATEDcoord: 14..267
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 11..262

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G016010CSPI02G13480Wild cucumber (PI 183967)cpicucB080
CsaV3_2G016010Cucsa.234330Cucumber (Gy14) v1cgycucB351
CsaV3_2G016010CmaCh02G002480Cucurbita maxima (Rimu)cmacucB0696
CsaV3_2G016010CmoCh02G002490Cucurbita moschata (Rifu)cmocucB0681
CsaV3_2G016010Cp4.1LG05g13830Cucurbita pepo (Zucchini)cpecucB0888
CsaV3_2G016010CsGy2G013370Cucumber (Gy14) v2cgybcucB064
CsaV3_2G016010Carg05168Silver-seed gourdcarcucB0842
CsaV3_2G016010Cla020287Watermelon (97103) v1cucwmB153
CsaV3_2G016010ClCG02G011840Watermelon (Charleston Gray)cucwcgB134
CsaV3_2G016010Lsi10G004890Bottle gourd (USVL1VR-Ls)cuclsiB104
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G016010Silver-seed gourdcarcucB0346
CsaV3_2G016010Silver-seed gourdcarcucB0381
CsaV3_2G016010Silver-seed gourdcarcucB0437
CsaV3_2G016010Silver-seed gourdcarcucB1057
CsaV3_2G016010Cucumber (Gy14) v2cgybcucB317
CsaV3_2G016010Cucumber (Gy14) v1cgycucB024
CsaV3_2G016010Cucumber (Gy14) v1cgycucB561
CsaV3_2G016010Cucurbita maxima (Rimu)cmacucB0137
CsaV3_2G016010Cucurbita maxima (Rimu)cmacucB0604
CsaV3_2G016010Cucurbita maxima (Rimu)cmacucB0651
CsaV3_2G016010Cucurbita maxima (Rimu)cmacucB0784
CsaV3_2G016010Cucurbita maxima (Rimu)cmacucB0932
CsaV3_2G016010Cucurbita moschata (Rifu)cmocucB0113
CsaV3_2G016010Cucurbita moschata (Rifu)cmocucB0591
CsaV3_2G016010Cucurbita moschata (Rifu)cmocucB0637
CsaV3_2G016010Cucurbita moschata (Rifu)cmocucB0767
CsaV3_2G016010Cucurbita moschata (Rifu)cmocucB0923
CsaV3_2G016010Cucurbita pepo (Zucchini)cpecucB0063
CsaV3_2G016010Cucurbita pepo (Zucchini)cpecucB0113
CsaV3_2G016010Cucurbita pepo (Zucchini)cpecucB0291
CsaV3_2G016010Cucurbita pepo (Zucchini)cpecucB0334
CsaV3_2G016010Cucurbita pepo (Zucchini)cpecucB0829
CsaV3_2G016010Wild cucumber (PI 183967)cpicucB325
CsaV3_2G016010Wild cucumber (PI 183967)cpicucB384
CsaV3_2G016010Bottle gourd (USVL1VR-Ls)cuclsiB109
CsaV3_2G016010Bottle gourd (USVL1VR-Ls)cuclsiB121
CsaV3_2G016010Bottle gourd (USVL1VR-Ls)cuclsiB158
CsaV3_2G016010Melon (DHL92) v3.5.1cucmeB102
CsaV3_2G016010Melon (DHL92) v3.5.1cucmeB106
CsaV3_2G016010Melon (DHL92) v3.5.1cucmeB154
CsaV3_2G016010Melon (DHL92) v3.6.1cucmedB095
CsaV3_2G016010Melon (DHL92) v3.6.1cucmedB099
CsaV3_2G016010Melon (DHL92) v3.6.1cucmedB146
CsaV3_2G016010Watermelon (Charleston Gray)cucwcgB111
CsaV3_2G016010Watermelon (Charleston Gray)cucwcgB140
CsaV3_2G016010Watermelon (97103) v1cucwmB120
CsaV3_2G016010Watermelon (97103) v1cucwmB127
CsaV3_2G016010Watermelon (97103) v1cucwmB149
CsaV3_2G016010Watermelon (97103) v1cucwmB160
CsaV3_2G016010Watermelon (97103) v2cucwmbB101
CsaV3_2G016010Watermelon (97103) v2cucwmbB120
CsaV3_2G016010Watermelon (97103) v2cucwmbB128
CsaV3_2G016010Wax gourdcucwgoB159
CsaV3_2G016010Wax gourdcucwgoB187
CsaV3_2G016010Cucumber (Chinese Long) v3cuccucB088
CsaV3_2G016010Cucumber (Chinese Long) v3cuccucB098