Cucsa.234330 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.234330
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionCCR4-NOT transcription complex family protein
Locationscaffold01999 : 271276 .. 272149 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAaCTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTtAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTT

mRNA sequence

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTT

Coding sequence (CDS)

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAaCTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTtAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTT

Protein sequence

MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPX
Homology
[Close]
BLAST of Cucsa.234330 vs. Swiss-Prot
Match: CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-45
Identity = 102/256 (39.84%), Postives = 148/256 (57.81%), Query Frame = 1 

Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLD + ++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]
BLAST of Cucsa.234330 vs. Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.4e-41
Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 1 

Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLD + ++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]
BLAST of Cucsa.234330 vs. Swiss-Prot
Match: CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.0e-36
Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLD   ++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]
BLAST of Cucsa.234330 vs. Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 9.2e-36
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+   + ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]
BLAST of Cucsa.234330 vs. Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.7e-35
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+   ++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]
BLAST of Cucsa.234330 vs. TrEMBL
Match: A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 3.9e-166
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 1 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP 292
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP 291

[Close]
BLAST of Cucsa.234330 vs. TrEMBL
Match: V4S8J5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013857mg PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.9e-56
Identity = 118/263 (44.87%), Postives = 160/263 (60.84%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  +  NGLDF  +++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMRSNGLDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]
BLAST of Cucsa.234330 vs. TrEMBL
Match: V4TLB7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016106mg PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.4e-53
Identity = 117/262 (44.66%), Postives = 162/262 (61.83%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF+  +   D+ L    +L+IDTEFPGF+  +PR +   E Y D  FNV+ T 
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           LIQLGIT SD+ G+I  ++EFNFSDFD + D H+  +I  L+ +GLDF  ++KDGIP   
Sbjct: 67  LIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 136 FTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
           F  +FL +L K R+  +WVTFHGLYD+ YL+K       LP + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           +K +A +C+GL    +LGL +L ++LN+KR G  H+AGSDSLLTA+   EM  R+ +   
Sbjct: 187 IKVVAGYCQGLQGL-KLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEES 246

Query: 256 VCNGFLYGFSETLESMKMKMKM 277
             +GFLYG    +ES   ++ M
Sbjct: 247 AFDGFLYGLDSRIESKPAEIMM 266

[Close]
BLAST of Cucsa.234330 vs. TrEMBL
Match: A0A067ETV6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038950mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.9e-52
Identity = 116/262 (44.27%), Postives = 160/262 (61.07%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF+  +   D+ L    +L+IDTEFPGF+  +PR +   E Y D  FNV+ T 
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           LIQLGIT SD  G+I  ++EFNFSDFD + D H+  +I  L+ +GLDF  ++KDGIP   
Sbjct: 67  LIQLGITLSDKEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 136 FTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
           F  +FL +L K R+  +WVTFHGLYD+ YL+K       LP + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           +K +A +C+GL    +LGL +L ++LN+KR G  H+AGSDSLLTA+   EM  R+ +   
Sbjct: 187 IKVVAGYCQGLQGL-KLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEES 246

Query: 256 VCNGFLYGFSETLESMKMKMKM 277
             +GFLYG    +E    ++ M
Sbjct: 247 AFDGFLYGMDSRIERKPAEIMM 266

[Close]
BLAST of Cucsa.234330 vs. TrEMBL
Match: A0A0A0KTU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011090 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.4e-52
Identity = 112/257 (43.58%), Postives = 163/257 (63.42%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           +RQVW  N   E+A  ++ L    ++ +DTEFPGF+  +PRG+  + LY+D  FNVN  K
Sbjct: 5   VRQVWYHNLAQELAILNDHLFKFPVIVMDTEFPGFLRSTPRGAPQEHLYQDLKFNVNHLK 64

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHN-GLDFKTMKKDGIPIA 135
           ++QLG+T  D+   +G SW F FSDFD + D  SP ++ +L++N G +FK  +KDGIP A
Sbjct: 65  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDLSSPTSMQYLKNNKGFEFKKQRKDGIPSA 124

Query: 136 SFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
            F + FLPI     I +W+TFHG+YD+ YL+K M +I  +P+SM EFA +    +G V D
Sbjct: 125 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-IIKAMPESMVEFAIIAQRFLGTVND 184

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           LK+M   CE L   G LGL+RL +LL++       + GSDSLL A A+++M ++  ++S+
Sbjct: 185 LKYMIGHCERL-MKGELGLKRLAELLDVN--DTVFSGGSDSLLIALAYVKM-KKLKLSSE 244

Query: 256 VCNGFLYGFSETLESMK 272
              GFLYGF   +   K
Sbjct: 245 NTGGFLYGFQYRIRGYK 256

[Close]
BLAST of Cucsa.234330 vs. TAIR10
Match: AT1G06450.1 (AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46
Identity = 102/256 (39.84%), Postives = 148/256 (57.81%), Query Frame = 1 

Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLD + ++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]
BLAST of Cucsa.234330 vs. TAIR10
Match: AT3G44240.1 (AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 168.7 bits (426), Expect = 5.3e-42
Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 1 

Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLD + ++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]
BLAST of Cucsa.234330 vs. TAIR10
Match: AT1G61470.1 (AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-37
Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLD   ++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]
BLAST of Cucsa.234330 vs. TAIR10
Match: AT1G27890.1 (AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 152.1 bits (383), Expect = 5.2e-37
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+   + ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]
BLAST of Cucsa.234330 vs. TAIR10
Match: AT1G27820.1 (AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-36
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 1 

Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+   ++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]
BLAST of Cucsa.234330 vs. NCBI nr
Match: gi|449458674|ref|XP_004147072.1| (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus])

HSP 1 Score: 592.0 bits (1525), Expect = 5.5e-166
Identity = 289/291 (99.31%), Postives = 289/291 (99.31%), Query Frame = 1 

Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP 292
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIP 291

[Close]
BLAST of Cucsa.234330 vs. NCBI nr
Match: gi|567876007|ref|XP_006430593.1| (hypothetical protein CICLE_v10013857mg [Citrus clementina])

HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56
Identity = 118/263 (44.87%), Postives = 160/263 (60.84%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  +  NGLDF  +++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMRSNGLDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]
BLAST of Cucsa.234330 vs. NCBI nr
Match: gi|659108981|ref|XP_008454486.1| (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo])

HSP 1 Score: 220.3 bits (560), Expect = 4.4e-54
Identity = 112/249 (44.98%), Postives = 162/249 (65.06%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           +R+VW  NF  E+A  ++ L    ++ +DTEFPGF+  +PRG+ ++  Y+D  FN+N  K
Sbjct: 4   VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLK 63

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEH-NGLDFKTMKKDGIPIA 135
           ++QLG+T  D+   +G SW F FSDFD + D  SP +I +L++  G +FK  +KDGIP A
Sbjct: 64  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSA 123

Query: 136 SFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
            F + FLPI     I +W+TFHG+YD+ YL+K M +I  +P+SM EFA +    +G V D
Sbjct: 124 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-MIRTMPESMVEFAIIAQRHLGTVND 183

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           LKHM + CE L  +G LGL+RL +LLN+       N GSDSLL A A+ +M +    +S+
Sbjct: 184 LKHMIRNCEYL-MNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSE 243

Query: 256 VCNGFLYGF 264
           + +GFLYGF
Sbjct: 244 ITDGFLYGF 248

[Close]
BLAST of Cucsa.234330 vs. NCBI nr
Match: gi|567911399|ref|XP_006448013.1| (hypothetical protein CICLE_v10016106mg [Citrus clementina])

HSP 1 Score: 216.5 bits (550), Expect = 6.3e-53
Identity = 117/262 (44.66%), Postives = 162/262 (61.83%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF+  +   D+ L    +L+IDTEFPGF+  +PR +   E Y D  FNV+ T 
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           LIQLGIT SD+ G+I  ++EFNFSDFD + D H+  +I  L+ +GLDF  ++KDGIP   
Sbjct: 67  LIQLGITLSDNEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 136 FTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
           F  +FL +L K R+  +WVTFHGLYD+ YL+K       LP + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           +K +A +C+GL    +LGL +L ++LN+KR G  H+AGSDSLLTA+   EM  R+ +   
Sbjct: 187 IKVVAGYCQGLQGL-KLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEES 246

Query: 256 VCNGFLYGFSETLESMKMKMKM 277
             +GFLYG    +ES   ++ M
Sbjct: 247 AFDGFLYGLDSRIESKPAEIMM 266

[Close]
BLAST of Cucsa.234330 vs. NCBI nr
Match: gi|641839672|gb|KDO58599.1| (hypothetical protein CISIN_1g038950mg [Citrus sinensis])

HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52
Identity = 116/262 (44.27%), Postives = 160/262 (61.07%), Query Frame = 1 

Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF+  +   D+ L    +L+IDTEFPGF+  +PR +   E Y D  FNV+ T 
Sbjct: 7   ILNVWCENFEIVMRFLDKLLNCFNVLSIDTEFPGFLRNTPRNAPAVESYNDLKFNVDCTH 66

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           LIQLGIT SD  G+I  ++EFNFSDFD + D H+  +I  L+ +GLDF  ++KDGIP   
Sbjct: 67  LIQLGITLSDKEGKISYTFEFNFSDFDLKKDLHAGDSIQLLKDSGLDFDKIRKDGIPRCV 126

Query: 136 FTKKFLPILRK-RDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
           F  +FL +L K R+  +WVTFHGLYD+ YL+K       LP + E F+ V       V D
Sbjct: 127 FAPRFLEVLSKHRENLKWVTFHGLYDVAYLVKIF-TNDALPPTAEAFSGVAALFFQSVFD 186

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           +K +A +C+GL    +LGL +L ++LN+KR G  H+AGSDSLLTA+   EM  R+ +   
Sbjct: 187 IKVVAGYCQGLQGL-KLGLSKLARILNVKRHGGAHHAGSDSLLTAAVFAEMKNRYELEES 246

Query: 256 VCNGFLYGFSETLESMKMKMKM 277
             +GFLYG    +E    ++ M
Sbjct: 247 AFDGFLYGMDSRIERKPAEIMM 266

The following BLAST results are available for this feature:
BLAST of Cucsa.234330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CAF1A_ARATH3.7e-4539.84Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana GN=CAF1-1 PE... [more]
CAF1H_ARATH9.4e-4143.38Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE... [more]
CAF1E_ARATH7.0e-3638.96Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana GN=CAF1-5 PE... [more]
CAF1D_ARATH9.2e-3637.76Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE... [more]
CAF1C_ARATH2.7e-3539.29Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE... [more]
BLAST of Cucsa.234330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPP0_CUCSA3.9e-16699.31Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270190 PE=4 SV=1[more]
V4S8J5_9ROSI1.9e-5644.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013857mg PE=4 SV=1[more]
V4TLB7_9ROSI4.4e-5344.66Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016106mg PE=4 SV=1[more]
A0A067ETV6_CITSI2.9e-5244.27Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038950mg PE=4 SV=1[more]
A0A0A0KTU4_CUCSA6.4e-5243.58Uncharacterized protein OS=Cucumis sativus GN=Csa_4G011090 PE=4 SV=1[more]
BLAST of Cucsa.234330 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G06450.12.1e-4639.84 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44240.15.3e-4243.38 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G61470.13.9e-3738.96 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G27890.15.2e-3737.76 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G27820.11.5e-3639.29 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cucsa.234330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458674|ref|XP_004147072.1|5.5e-16699.31PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus][more]
gi|567876007|ref|XP_006430593.1|2.7e-5644.87hypothetical protein CICLE_v10013857mg [Citrus clementina][more]
gi|659108981|ref|XP_008454486.1|4.4e-5444.98PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo][more]
gi|567911399|ref|XP_006448013.1|6.3e-5344.66hypothetical protein CICLE_v10016106mg [Citrus clementina][more]
gi|641839672|gb|KDO58599.1|4.1e-5244.27hypothetical protein CISIN_1g038950mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.234330.1Cucsa.234330.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 19..134
score: 3.
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 8..261
score: 3.8
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 11..262
score: 2.96
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 2..264
score: 7.3
NoneNo IPR availablePANTHERPTHR10797:SF14CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATEDcoord: 2..264
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.234330Cla020287Watermelon (97103) v1cgywmB437
Cucsa.234330Csa2G270190Cucumber (Chinese Long) v2cgycuB330
Cucsa.234330ClCG02G011840Watermelon (Charleston Gray)cgywcgB409
Cucsa.234330CSPI02G13480Wild cucumber (PI 183967)cgycpiB345
Cucsa.234330CmaCh02G002480Cucurbita maxima (Rimu)cgycmaB0647
Cucsa.234330CmoCh02G002490Cucurbita moschata (Rifu)cgycmoB0648
Cucsa.234330Lsi10G004890Bottle gourd (USVL1VR-Ls)cgylsiB380
Cucsa.234330Cp4.1LG05g13830Cucurbita pepo (Zucchini)cgycpeB0617
Cucsa.234330CsaV3_2G016010Cucumber (Chinese Long) v3cgycucB351
Cucsa.234330Cla97C02G037450Watermelon (97103) v2cgywmbB411
Cucsa.234330Carg05168Silver-seed gourdcarcgyB0922
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.234330Melon (DHL92) v3.6.1cgymedB392
Cucsa.234330Melon (DHL92) v3.6.1cgymedB393
Cucsa.234330Silver-seed gourdcarcgyB0410
Cucsa.234330Cucumber (Chinese Long) v3cgycucB352
Cucsa.234330Watermelon (97103) v2cgywmbB410
Cucsa.234330Wax gourdcgywgoB462
Cucsa.234330Wax gourdcgywgoB463
Cucsa.234330Cucumber (Gy14) v1cgycgyB121
Cucsa.234330Cucurbita maxima (Rimu)cgycmaB0646
Cucsa.234330Cucurbita moschata (Rifu)cgycmoB0647
Cucsa.234330Wild cucumber (PI 183967)cgycpiB346
Cucsa.234330Cucumber (Chinese Long) v2cgycuB331
Cucsa.234330Melon (DHL92) v3.5.1cgymeB393
Cucsa.234330Melon (DHL92) v3.5.1cgymeB394
Cucsa.234330Watermelon (Charleston Gray)cgywcgB408
Cucsa.234330Watermelon (97103) v1cgywmB436
Cucsa.234330Cucurbita pepo (Zucchini)cgycpeB0615
Cucsa.234330Cucurbita pepo (Zucchini)cgycpeB0616
Cucsa.234330Bottle gourd (USVL1VR-Ls)cgylsiB381