CsGy2G013370 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G013370
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	putative CCR4-associated factor 1 homolog 8
Location	Chr2 : 13115270 .. 13116172 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

mRNA sequence

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

Coding sequence (CDS)

ATGGGTGGAAGAAATCAAACCCGATCGACAAGAGAAAAGCCTTTGATTCGACAAGTTTGGGCTTCGAATTTCGATTCAGAAATTGCCCGATTTGATGAATGTCTGCGATTCCACACCATTCTTACCATCGACACTGAATTCCCTGGCTTTATTGCACAATCTCCACGGGGTTCCATTGATGATGAGCTTTACAAAGACTTCTGTTTCAATGTAAACCAAACTAAGCTCATTCAACTAGGTATCACAGCTTCAGATGATTTGGGTCAAATTGGCGGTTCATGGGAGTTTAATTTCTCCGACTTTGACTTCGAAGCTGACGCTCATTCTCCATATGCCATTCCGTTTTTAGAACATAATGGGTTGGATTTTAAAACAATGAAGAAAGATGGAATACCCATTGCTTCATTCACTAAAAAATTCCTACCTATCCTTCGAAAACGTGACATCTTTCGATGGGTTACCTTCCATGGCCTCTACGACATAGGTTATCTAATCAAAGCGATGGGGTTAATCACAGTGTTGCCGAAATCAATGGAGGAATTCGCAACGGTGGTGGTTAACGAAGTTGGAATTGTGAGGGATTTGAAGCATATGGCTAAATTTTGTGAAGGACTAGATGATCATGGAAGACTTGGACTTGAAAGATTAGGAAAATTATTGAATCTAAAACGATTTGGAATGAAACACAATGCTGGATCAGATAGCTTGCTTACCGCATCCGCACATCTTGAGATGGTGGAAAGATTCGGCATGAATTCTAAAGTTTGTAATGGCTTTTTGTATGGTTTTTCAGAAACGCTGGAATCCATGAAGATGAAGATGAAGATGAAGATTTGCCATCACAACATTCTTAGATTTAGTCTTTATATACCTTGTTATTTTGTTTTTTATATGTCCACTTAA

Protein sequence

MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST

Homology

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BLAST of CsGy2G013370 vs. NCBI nr
Match: XP_004147072.1 (PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN61926.1 hypothetical protein Csa_2G270190 [Cucumis sativus])

HSP 1 Score: 614.0 bits (1582), Expect = 2.7e-172
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300

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BLAST of CsGy2G013370 vs. NCBI nr
Match: XP_023533172.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 337.4 bits (864), Expect = 4.9e-89
Identity = 155/257 (60.31%), Postives = 203/257 (78.99%), Query Frame = 0


Query: 12  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNV 71
           + PLIR+VWA N D EI R D CL  +++++IDTEFPG I ++P G+ID+ELY DF FNV
Sbjct: 11  DNPLIREVWAYNLDHEIIRLDRCLLSYSVMSIDTEFPGCIKRTPWGTIDEELYADFRFNV 70

Query: 72  NQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI 131
           NQTK+IQLG+T SD++G IGG+WEFNFSDFD E DAH+P +I FL+ NGLDF  +KKDGI
Sbjct: 71  NQTKVIQLGVTVSDEVGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDGI 130

Query: 132 PIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGI 191
            +  F  +FL  +RK  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG 
Sbjct: 131 QVRKFAIRFLYTIRKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFEWIVARRVGT 190

Query: 192 VRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGM 251
           VRDLKHMA+FCEGL+  G LGLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  
Sbjct: 191 VRDLKHMARFCEGLEG-GNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDF 250

Query: 252 NSKVCNGFLYGFSETLE 269
           N+++C+GFLYG S+  E
Sbjct: 251 NAEICDGFLYGLSKKFE 266

[Close]

BLAST of CsGy2G013370 vs. NCBI nr
Match: XP_022947867.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 333.2 bits (853), Expect = 9.2e-88
Identity = 161/270 (59.63%), Postives = 202/270 (74.81%), Query Frame = 0


Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MG RN+ R  R  P I++VWASNFD EI R + CL+ + IL+IDTEFPG I  +P GSID
Sbjct: 1   MGRRNRERPRRRTPSIQEVWASNFDHEILRLERCLQANHILSIDTEFPGCIRSTPWGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           + +Y+D  FNVNQTKLIQLG+TASD+ GQ+ GSWEFNFSDFD + D  +P +I FLE NG
Sbjct: 61  ERVYEDLRFNVNQTKLIQLGLTASDESGQVAGSWEFNFSDFDHQIDTQNPSSIAFLEQNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LDF  +KK GIP++ FT  F  I+R+  + +WVTFHGLYDIGYL+KAMG+   LP+SMEE
Sbjct: 121 LDFAKLKKQGIPLSLFTLNFSRIIRRSRVRKWVTFHGLYDIGYLVKAMGVAEELPESMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FA +V   VG+VRDLK +A++CEGL + GR+GLERLG+LL  KRFGMKH+AGSDSLLTA 
Sbjct: 181 FAEMVARGVGVVRDLKEVARWCEGL-EQGRVGLERLGELLGEKRFGMKHHAGSDSLLTAF 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESM 271
            H +M   F + S+  +G LYG    L+ M
Sbjct: 241 VHAKMARWFRLESEAYDGHLYGLRNKLQYM 269

[Close]

BLAST of CsGy2G013370 vs. NCBI nr
Match: XP_022947868.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87
Identity = 154/259 (59.46%), Postives = 201/259 (77.61%), Query Frame = 0


Query: 12  EKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNV 71
           + PLIR+VWA N D EI R D CL  ++I++IDTEFPG I ++P G+ D+ELY DF FNV
Sbjct: 11  DNPLIREVWAYNLDHEIIRLDRCLLSYSIMSIDTEFPGCIKRTPWGTFDEELYADFRFNV 70

Query: 72  NQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGI 131
           NQTK+IQLG+T SD+ G IGG+WEFNFSDFD E DAH+P +I FL+ NGLDF  +KKDGI
Sbjct: 71  NQTKVIQLGVTVSDESGNIGGTWEFNFSDFDPEIDAHNPASICFLKQNGLDFGKLKKDGI 130

Query: 132 PIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGI 191
            +  F  +FL  L K  I+RWVTFHGLYDIGYL+ AMG++  LP+++ EF  +V   VG 
Sbjct: 131 KVRKFAIRFLYTLGKHAIYRWVTFHGLYDIGYLMLAMGVVKSLPETLGEFKWIVARRVGT 190

Query: 192 VRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGM 251
           VRDLKHMA+FCEGL+  G LGLE+LG+LL+ KRFG+KH+AGSDSL+TA  H +M++R+  
Sbjct: 191 VRDLKHMARFCEGLEG-GNLGLEKLGQLLDQKRFGLKHHAGSDSLMTALLHEKMLQRYDF 250

Query: 252 NSKVCNGFLYGFSETLESM 271
           ++++C+GFLYG S+  E +
Sbjct: 251 HAEICDGFLYGLSKKFEEL 268

[Close]

BLAST of CsGy2G013370 vs. NCBI nr
Match: XP_022146113.1 (putative CCR4-associated factor 1 homolog 8 [Momordica charantia])

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-86
Identity = 166/300 (55.33%), Postives = 216/300 (72.00%), Query Frame = 0


Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MG   +  S R    IR+VW+ NFD E+A  ++CL  + ILTIDTEFPGFI  +P G+I+
Sbjct: 1   MGRGKRGHSRRGNAQIREVWSRNFDLELANLNDCLNLYPILTIDTEFPGFIRSTPWGAIE 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           ++LY DF FNVN+TKLIQLG+TASD++G IG +WEFNFSDFD + D H+  ++ FL+ NG
Sbjct: 61  EKLYDDFRFNVNRTKLIQLGLTASDEIGNIGSTWEFNFSDFDPQIDTHNASSVSFLKQNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LDF  +K+ GIPI  FT K   + RK  I RWVTFHGLYDIGYL+KAMG+   +P+SMEE
Sbjct: 121 LDFDKLKEFGIPINEFTSKAFFLFRKHRIVRWVTFHGLYDIGYLLKAMGVAGEIPESMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FA +V   +G V DLKHMA+FCEGL+D G+LGLE+L +L+N KRFG KH+AGSDSLLTAS
Sbjct: 181 FAELVERALGNVSDLKHMAQFCEGLED-GKLGLEKLAQLMNQKRFGNKHHAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNI---LRFSLYIPCYFVFY 298
            + +M  +F + S+VC+GFLYG    L + K+K+   +    I   LR + Y PCY  +Y
Sbjct: 241 LYAKMKNQFELGSEVCDGFLYGLRIKLHA-KIKLYQNLMFGQIPYGLR-ACYPPCYIAYY 297

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BLAST of CsGy2G013370 vs. TAIR10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 189.1 bits (479), Expect = 3.9e-48
Identity = 102/256 (39.84%), Postives = 148/256 (57.81%), Query Frame = 0


Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLD + ++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]

BLAST of CsGy2G013370 vs. TAIR10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 172.2 bits (435), Expect = 4.9e-43
Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLD + ++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]

BLAST of CsGy2G013370 vs. TAIR10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+   + ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]

BLAST of CsGy2G013370 vs. TAIR10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-38
Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLD   ++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of CsGy2G013370 vs. TAIR10
Match: AT1G27820.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-37
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+   ++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of CsGy2G013370 vs. Swiss-Prot
Match: sp|Q9SHJ0|CAF1A_ARATH (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 7.1e-47
Identity = 102/256 (39.84%), Postives = 148/256 (57.81%), Query Frame = 0


Query: 13  KPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVN 72
           +PL R+VW SN D E+AR  ECL+   ++  DTE+PG I ++   S  DE Y+    NV 
Sbjct: 6   QPLARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVE 65

Query: 73  QTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIP 132
            TKLIQ G T  +  G+IGG WE NFS+F   +D  +  +I FL  +GLD + ++ +G+ 
Sbjct: 66  NTKLIQCGFTLFNAKGEIGGVWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVD 125

Query: 133 I--ASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG 192
           +    F  K + + R +    +VTF G YD  Y +  +     LP++  EFAT VV   G
Sbjct: 126 MFGYGFFPKLMTVFRSQKHVEFVTFQGAYDFAYFLSILN-HGKLPETHGEFATEVVKVFG 185

Query: 193 IVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFG 252
            V D K MA FCEGL +H  LGL +L +LL + R G  H+AGSDSL+TA   +++   + 
Sbjct: 186 QVYDTKVMAGFCEGLGEH--LGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVY- 245

Query: 253 MNSKVCNGFLYGFSET 267
            +S+   G +YG  ++
Sbjct: 246 EDSRFARGLIYGIGKS 257

[Close]

BLAST of CsGy2G013370 vs. Swiss-Prot
Match: sp|Q9LXM4|CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.9e-42
Identity = 95/219 (43.38%), Postives = 132/219 (60.27%), Query Frame = 0


Query: 32  DECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLIQLGITASDDLGQIG 91
           ++CLR +  + IDTEFP  + ++ + + D+E Y D  F+V++ KLIQLG+T  D  G+IG
Sbjct: 5   EDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG 64

Query: 92  GSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFTKKFLPILRK-RDIF 151
           G+WE NFSDF  + DA +  +I FL  NGLD + ++++GI I  F  +   +L+K R   
Sbjct: 65  GTWEINFSDFGVD-DARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNI 124

Query: 152 RWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDLKHMAKFCEGLDDHGR 211
            WVTFHG YDI YL+K       LP + E F+  V   +G V DLK MA  CEGL    R
Sbjct: 125 TWVTFHGSYDIAYLLKGF-TGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLS--SR 184

Query: 212 LGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERF 250
           LGLE L     L R G  H+AGS++ LTA    +++  F
Sbjct: 185 LGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219

[Close]

BLAST of CsGy2G013370 vs. Swiss-Prot
Match: sp|Q9C6M9|CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 91/241 (37.76%), Postives = 135/241 (56.02%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 3   EVWRWNKEVEMDSIRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 62

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G I  +WE N SDF+      +  +I FL+ NGL+   + ++GI I  F 
Sbjct: 63  QLGFTLFDRRG-ITKTWEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFF 122

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL+++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 123 RDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDV 182

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 257
           K +A+ C GL    R GL+R+  +L +KR G  H+AGSDS LTA    ++      + K 
Sbjct: 183 KKIAESCSGLS--SRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNSRKQ 240

[Close]

BLAST of CsGy2G013370 vs. Swiss-Prot
Match: sp|O64773|CAF1E_ARATH (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.9e-37
Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N  +E+    +CL+    + IDTEFPG + ++P  + D+  Y+D  FNV+ T LI
Sbjct: 4   EVWRWNKQAEMNSIRDCLKHCNSIAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLI 63

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG+T       I  +WE N SDF+      +  +I FL++NGLD   ++++GI I  F 
Sbjct: 64  QLGLTLFGK--GITKTWEINLSDFNESKSLKNDKSIAFLKNNGLDLDKIREEGIGIEEFF 123

Query: 138 KKFLPIL-RKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
            +F  IL  K    RWVTF G YD  YL+K +     LP++ +EF   V   +G  V D+
Sbjct: 124 MEFSQILNEKHGKMRWVTFQGSYDKAYLLKGL-TRKPLPETSKEFDETVQQLLGRFVYDV 183

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMV 247
           K MA  C GL    R GL+R+  +L ++R G  H+AGSDS LTA    +++
Sbjct: 184 KKMAGLCSGLS--SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKLI 229

[Close]

BLAST of CsGy2G013370 vs. Swiss-Prot
Match: sp|Q9SFX6|CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=CAF1-3 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.9e-36
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 0


Query: 18  QVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKLI 77
           +VW  N + E+    +CL+  + + IDTEFPG + ++P  + ++  Y+D  FNV+ T LI
Sbjct: 8   EVWRWNKEVEMNSIRDCLKHCSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLI 67

Query: 78  QLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASFT 137
           QLG T  D  G    +WE N SDFD      +  +I FL+ NGL+   ++++GI I  F 
Sbjct: 68  QLGFTLFDRRG-FAKTWEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFF 127

Query: 138 KKFLPILRKRD-IFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVG-IVRDL 197
           + F  IL ++D    WV F G YD  YL+K +     LP++ EEF   V   +G  V D+
Sbjct: 128 RDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDV 187

Query: 198 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTA 240
           K +A+ C GL    + GL+R+  +L +KR G  H+AGSDS LTA
Sbjct: 188 KKIAESCSGLS--SQFGLQRIADVLQMKRVGKAHHAGSDSELTA 228

[Close]

BLAST of CsGy2G013370 vs. TrEMBL
Match: tr|A0A0A0LPP0|A0A0A0LPP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.8e-172
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60
           MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID
Sbjct: 1   MGGRNQTRSTREKPLIRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSID 60

Query: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120
           DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG
Sbjct: 61  DELYKDFCFNVNQTKLIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNG 120

Query: 121 LDFKTMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180
           LD K MKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE
Sbjct: 121 LDLKKMKKDGIPIASFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEE 180

Query: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240
           FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS
Sbjct: 181 FATVVVNEVGIVRDLKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTAS 240

Query: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300
           AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST
Sbjct: 241 AHLEMVERFGMNSKVCNGFLYGFSETLESMKMKMKMKICHHNILRFSLYIPCYFVFYMST 300

[Close]

BLAST of CsGy2G013370 vs. TrEMBL
Match: tr|A0A1S4E611|A0A1S4E611_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992290 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.8e-72
Identity = 131/153 (85.62%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 17  RQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTKL 76
           RQVWASNF+SEI +FDECLRFHTILTIDTEFPGFI QSPR SID+E+YK+F FNVNQ KL
Sbjct: 1   RQVWASNFNSEITQFDECLRFHTILTIDTEFPGFIIQSPRDSIDEEIYKNFRFNVNQMKL 60

Query: 77  IQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIASF 136
           IQLGITAS+D GQIGGSWEFNFSDFDF+ D+HSP AIPFLE NGLDFK +KK GIPIASF
Sbjct: 61  IQLGITASNDFGQIGGSWEFNFSDFDFQVDSHSPSAIPFLEKNGLDFKKLKKYGIPIASF 120

Query: 137 TKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMG 170
           TKKFLPI++KRDIFRWVTFHGLYDIGYLIKAMG
Sbjct: 121 TKKFLPIIQKRDIFRWVTFHGLYDIGYLIKAMG 153

[Close]

BLAST of CsGy2G013370 vs. TrEMBL
Match: tr|A0A2H5NUC3|A0A2H5NUC3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076790 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.1e-57
Identity = 117/263 (44.49%), Postives = 161/263 (61.22%), Query Frame = 0


Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  ++ NG+DF  +++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMQRNGMDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]

BLAST of CsGy2G013370 vs. TrEMBL
Match: tr|V4S8J5|V4S8J5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013857mg PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57
Identity = 118/263 (44.87%), Postives = 160/263 (60.84%), Query Frame = 0


Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           I  VW  NF  E  +FD+ L    IL+IDTEFPGFI  +PR +    +Y +  FNV+ TK
Sbjct: 3   IISVWRENFQQESVQFDKSLHRFNILSIDTEFPGFICSTPRDAPTSVVYNNLKFNVDNTK 62

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEHNGLDFKTMKKDGIPIAS 135
           +IQLGIT SDD G IG +WEFNFSDFDF+ D +   ++  +  NGLDF  +++DGIP   
Sbjct: 63  IIQLGITLSDDKGNIGSTWEFNFSDFDFQKDPYVEESMRLMRSNGLDFAKIRRDGIPQCV 122

Query: 136 FTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRDL 195
           F  + L IL K    +WVTFHGLYD+ ++ K + +   LP+S   FA         V D+
Sbjct: 123 FVPRLLEILSKHKNLKWVTFHGLYDLAHITK-LFINHPLPQSARAFAVGATKYFESVLDV 182

Query: 196 KHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSKV 255
           K +AK+C+GL   G LGL +L K+L ++R G  HNAGSDS +TA+   +M E+F    KV
Sbjct: 183 KVVAKYCDGLMG-GNLGLSKLAKILGVERLGEAHNAGSDSFVTAAVFAKMKEKFEFEEKV 242

Query: 256 CNGFLYGFSETLESMKMKMKMKI 279
            +G LYG  E +    + +  KI
Sbjct: 243 FDGILYGMDERIMKRSIHVPRKI 263

[Close]

BLAST of CsGy2G013370 vs. TrEMBL
Match: tr|A0A1S3BY95|A0A1S3BY95_CUCME (putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494884 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 112/249 (44.98%), Postives = 162/249 (65.06%), Query Frame = 0


Query: 16  IRQVWASNFDSEIARFDECLRFHTILTIDTEFPGFIAQSPRGSIDDELYKDFCFNVNQTK 75
           +R+VW  NF  E+A  ++ L    ++ +DTEFPGF+  +PRG+ ++  Y+D  FN+N  K
Sbjct: 4   VRKVWYHNFIQELAILNDQLFKFPVIAMDTEFPGFLRSTPRGAPEEHFYQDLKFNLNHLK 63

Query: 76  LIQLGITASDDLGQIGGSWEFNFSDFDFEADAHSPYAIPFLEH-NGLDFKTMKKDGIPIA 135
           ++QLG+T  D+   +G SW F FSDFD + D  SP +I +L++  G +FK  +KDGIP A
Sbjct: 64  ILQLGLTLMDENEHVGLSWVFTFSDFDEQTDFSSPTSIQYLKNKKGFEFKKQRKDGIPSA 123

Query: 136 SFTKKFLPILRKRDIFRWVTFHGLYDIGYLIKAMGLITVLPKSMEEFATVVVNEVGIVRD 195
            F + FLPI     I +W+TFHG+YD+ YL+K M +I  +P+SM EFA +    +G V D
Sbjct: 124 EFRRAFLPIFSSNRITKWITFHGIYDVAYLLKLM-MIRTMPESMVEFAIIAQRHLGTVND 183

Query: 196 LKHMAKFCEGLDDHGRLGLERLGKLLNLKRFGMKHNAGSDSLLTASAHLEMVERFGMNSK 255
           LKHM + CE L  +G LGL+RL +LLN+       N GSDSLL A A+ +M +    +S+
Sbjct: 184 LKHMIRNCEYL-MNGELGLKRLAELLNVN--DTIFNGGSDSLLIALAYAKMKKTLKFSSE 243

Query: 256 VCNGFLYGF 264
           + +GFLYGF
Sbjct: 244 ITDGFLYGF 248

The following BLAST results are available for this feature:

BLAST of CsGy2G013370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147072.1	2.7e-172	99.33	PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis sativus] >KGN619...	[more]
XP_023533172.1	4.9e-89	60.31	putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]	[more]
XP_022947867.1	9.2e-88	59.63	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]
XP_022947868.1	2.1e-87	59.46	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]
XP_022146113.1	1.0e-86	55.33	putative CCR4-associated factor 1 homolog 8 [Momordica charantia]	[more]

BLAST of CsGy2G013370 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G06450.1	3.9e-48	39.84	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G44240.1	4.9e-43	43.38	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	2.2e-38	37.76	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G61470.1	2.2e-38	38.96	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27820.1	1.1e-37	39.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of CsGy2G013370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SHJ0\|CAF1A_ARATH	7.1e-47	39.84	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9LXM4\|CAF1H_ARATH	8.9e-42	43.38	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9C6M9\|CAF1D_ARATH	3.9e-37	37.76	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|O64773\|CAF1E_ARATH	3.9e-37	38.96	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
sp\|Q9SFX6\|CAF1C_ARATH	1.9e-36	39.29	Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of CsGy2G013370 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPP0\|A0A0A0LPP0_CUCSA	1.8e-172	99.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G270190 PE=4 SV=1	[more]
tr\|A0A1S4E611\|A0A1S4E611_CUCME	2.8e-72	85.62	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC107992...	[more]
tr\|A0A2H5NUC3\|A0A2H5NUC3_CITUN	1.1e-57	44.49	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_076790 PE=4 SV=1	[more]
tr\|V4S8J5\|V4S8J5_9ROSI	1.5e-57	44.87	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013857mg PE=4 ...	[more]
tr\|A0A1S3BY95\|A0A1S3BY95_CUCME	3.1e-55	44.98	putative CCR4-associated factor 1 homolog 8 OS=Cucumis melo OX=3656 GN=LOC103494...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR006941	RNase_CAF1
IPR036397	RNaseH_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G013370.1	CsGy2G013370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	G3DSA:3.30.420.10		coord: 12..263 e-value: 9.4E-66 score: 223.6
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 19..134 e-value: 3.4E-7 score: 29.7
None	No IPR available	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 14..267
None	No IPR available	PANTHER	PTHR10797:SF16	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 1-RELATED	coord: 14..267
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	SSF53098	Ribonuclease H-like	coord: 11..262

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G013370	Cla020287	Watermelon (97103) v1	cgybwmB133
CsGy2G013370	Csa2G270190	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G013370	ClCG02G011840	Watermelon (Charleston Gray)	cgybwcgB115
CsGy2G013370	CSPI02G13480	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G013370	CmaCh02G002480	Cucurbita maxima (Rimu)	cgybcmaB224
CsGy2G013370	CmoCh02G002490	Cucurbita moschata (Rifu)	cgybcmoB216
CsGy2G013370	Lsi10G004890	Bottle gourd (USVL1VR-Ls)	cgyblsiB086
CsGy2G013370	Cp4.1LG05g13830	Cucurbita pepo (Zucchini)	cgybcpeB248
CsGy2G013370	CsaV3_2G016010	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G013370	Cla97C02G037450	Watermelon (97103) v2	cgybwmbB110
CsGy2G013370	Carg05168	Silver-seed gourd	carcgybB0792

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G013370	Cucurbita moschata (Rifu)	cgybcmoB150
CsGy2G013370	Cucumber (Gy14) v2	cgybcgybB061
CsGy2G013370	Cucumber (Gy14) v2	cgybcgybB071
CsGy2G013370	Cucurbita maxima (Rimu)	cgybcmaB165
CsGy2G013370	Cucurbita maxima (Rimu)	cgybcmaB208
CsGy2G013370	Cucurbita maxima (Rimu)	cgybcmaB218
CsGy2G013370	Cucurbita maxima (Rimu)	cgybcmaB256
CsGy2G013370	Cucurbita moschata (Rifu)	cgybcmoB202
CsGy2G013370	Cucurbita moschata (Rifu)	cgybcmoB209
CsGy2G013370	Cucurbita pepo (Zucchini)	cgybcpeB185
CsGy2G013370	Cucurbita pepo (Zucchini)	cgybcpeB193
CsGy2G013370	Cucurbita pepo (Zucchini)	cgybcpeB234
CsGy2G013370	Cucumber (Chinese Long) v2	cgybcuB080
CsGy2G013370	Cucumber (Chinese Long) v2	cgybcuB086
CsGy2G013370	Bottle gourd (USVL1VR-Ls)	cgyblsiB090
CsGy2G013370	Bottle gourd (USVL1VR-Ls)	cgyblsiB100
CsGy2G013370	Melon (DHL92) v3.5.1	cgybmeB084
CsGy2G013370	Melon (DHL92) v3.5.1	cgybmeB088
CsGy2G013370	Melon (DHL92) v3.5.1	cgybmeB133
CsGy2G013370	Melon (DHL92) v3.6.1	cgybmedB079
CsGy2G013370	Melon (DHL92) v3.6.1	cgybmedB084
CsGy2G013370	Watermelon (Charleston Gray)	cgybwcgB122
CsGy2G013370	Watermelon (97103) v1	cgybwmB129
CsGy2G013370	Watermelon (97103) v1	cgybwmB141
CsGy2G013370	Wild cucumber (PI 183967)	cgybcpiB081
CsGy2G013370	Wild cucumber (PI 183967)	cgybcpiB086
CsGy2G013370	Silver-seed gourd	carcgybB0325
CsGy2G013370	Silver-seed gourd	carcgybB0356
CsGy2G013370	Silver-seed gourd	carcgybB0999
CsGy2G013370	Cucumber (Chinese Long) v3	cgybcucB093
CsGy2G013370	Watermelon (97103) v2	cgybwmbB117
CsGy2G013370	Wax gourd	cgybwgoB146
CsGy2G013370	Wax gourd	cgybwgoB175