CsaV3_2G014930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G014930
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Locationchr2 : 12430471 .. 12431796 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTTTTTAAAGATTTTCTTTTTTTTTAAAAAAAAGTAAATGGAATATTTGAATTAAAAAGAAAAGGTTTCAATTTAGTGTAACTATAAATACCAATCAAACTAAAAGTATTCAAAACAATATAACTAACATTCTCAATTGGAAAGAAAATTAAAGGAAAAAAAAAGTGAAAATTAAGATTACTTTGTTTTTTCTTGTTGATTTTTCTCTCTGTTTCCATGATTCCGATTAAGAATTTCTTTGCAGCACCCTCGTGTTTTCTTCCACCGGAGATGATCTTCACGGTTGAGTCGAAAAATTCGGAGGAGGAGTTTGTTTATCAGTAACTTTGATTTGAATTTTACGATATCAATTTTGTGGTTTTTTTCTTTCTTTTTTTCTTTCTTCGAAATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAGGAAAACTATGTAAATCAAAAAGCTCTAAGTTGTGGTAAATCCGCCAAGAAAATTAGGGCTACGGGTTGAAGAAGATGAAAAAAGTTGTAACAACTTTTAATGTATGTAATGTATACAGTTTTATTTTCAAAAACATATATTTGGATGAAAGTTATATAAAAACACATTCAAACCACTTTTTATTTTTTAGTTAGACTTCAATTCAATTAACCCTATCAACTTTTTTAATATTATGGTCCGCCTCAACA

mRNA sequence

ATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAG

Coding sequence (CDS)

ATGGAGTCCGTCAATTTCTACGATATAAGAACAGAGAAAGCGAACGCGATTCTTAAGTATCGACAGTTTAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGTTTGATTCTCATCGTGATCTCGAGATTTTCCAGTCATTTGCCGACTGCTTTGAAAAATTCTACCGAGTATTTCCGATGCTTGTCCGTGACATTAATCAGTCCTCGTTTCGTGTTTTTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAGTCTGGACAGTTCTCTGCCAAGGATCCGAGCAAGAAGAGTTTAGTTGCGGATCTTTACGAGGAGTTCATAAAAAACAGCGAGAAGAATAATCAGAAATCTCCACGCACTGAAATCAAGCATATCGACGAAAGCCGCAGAAAAGCTTCGATATCTGTCGAGAAGATCGTGAATAATCCTAAGGAAACAAGGCGATATGAGAGGAGTAAATCGGAGAGAATGGAGGTTGTACCGCGGGAGAAGGTGGATCGTGAAATGCAGCGATCGGAGACGGAGAAATGCAAGAAAATGGTGGAATTGAAGGAAGGAAGAAGAAATAGGTCGTATCTGGAAGATGGAATGAGCAACGAAGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGCAAAGGGAGGAAGAGTTGAGTGAATTTTAG

Protein sequence

MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKSPRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF
Homology
[Close]
BLAST of CsaV3_2G014930 vs. NCBI nr
Match: XP_011649236.1 (PREDICTED: uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hypothetical protein Csa_2G248720 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 1.2e-114
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180
           PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC
Sbjct: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180

Query: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF
Sbjct: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]
BLAST of CsaV3_2G014930 vs. NCBI nr
Match: XP_008460958.1 (PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo])

HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEKNNQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTE----IKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDRE-MQRS 180
           PRTE    IKHIDESR KAS+SVEK+VNNP+ET+RY+R KSE+MEVV REKVDRE +QRS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           ETEKCKKMVELKEGRRN SY ED MSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]
BLAST of CsaV3_2G014930 vs. NCBI nr
Match: XP_022146107.1 (uncharacterized protein LOC111015401 [Momordica charantia])

HSP 1 Score: 290.4 bits (742), Expect = 5.2e-75
Identity = 167/228 (73.25%), Postives = 190/228 (83.33%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIR EKANAILK+RQ RKIANLFRFIELCL+L++ISRFSSHLP+A+KNS EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYE+FIKNSEK NQK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEK-NQKT 120

Query: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180
              EI    K ID     AS++ +K+V NP+E + Y RS+SE++ V  +E   RE++RSE
Sbjct: 121 RHAEIEYRTKQID-GDGDASVAAKKVV-NPEEIKLYRRSQSEKIAVAQQENPQRELRRSE 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEE 225
           TEKCKK+V   EG    SY ED MSNEEFRQTVEAFIARQQRL+REEE
Sbjct: 181 TEKCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEE 225

[Close]
BLAST of CsaV3_2G014930 vs. NCBI nr
Match: XP_022986604.1 (uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima])

HSP 1 Score: 282.0 bits (720), Expect = 1.9e-72
Identity = 168/238 (70.59%), Postives = 191/238 (80.25%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+V++RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEF++NSEK NQK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEK-NQKT 120

Query: 121 PRTEI----KHIDESR------RKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDR 180
            R EI    K ID+SR         SI+++KI     E + Y+RS+SE++ VV RE   R
Sbjct: 121 RRAEIEYRVKQIDDSRGNXXXXXDTSIAIKKI----GEIKHYQRSESEKIGVVQRENPHR 180

Query: 181 EMQRSETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           E++RSETEK KK+V L E  RNRS  ED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 ELRRSETEKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 233

[Close]
BLAST of CsaV3_2G014930 vs. NCBI nr
Match: XP_022948013.1 (uncharacterized protein LOC111451717 [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 4.9e-65
Identity = 154/249 (61.85%), Postives = 178/249 (71.49%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESV F DIRTEK NAILKYRQ RKIANLFRFIELCLIL+VIS+ S HLP+A KNS EYF
Sbjct: 1   MESVGFCDIRTEKMNAILKYRQLRKIANLFRFIELCLILVVISKLSIHLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLS+TLISPRFVFLIGNAIVITLFAKSGQFS  D SKK+ VADLYEEFI+NSEK NQ++
Sbjct: 61  RCLSMTLISPRFVFLIGNAIVITLFAKSGQFSGTDLSKKNSVADLYEEFIQNSEK-NQRT 120

Query: 121 PRTEIKHIDESRRKASI---------------------SVEKIVNNPKETRRYERSKSER 180
            R EIK+  +     ++                          + NP+E + Y RS+SE+
Sbjct: 121 RRAEIKYRIKQTDSGNVHGXXXXXXXXXXXXXXXXXXXXXXXKIGNPEEIKHYRRSQSEK 180

Query: 181 MEVVPREKVDREMQRSETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRL 229
           + VV RE    ++ RSETEK KK+V L EG    SY EDGMSNEEF++ VEAFIARQQRL
Sbjct: 181 IAVVQRENPHSKLSRSETEKSKKIVRLSEGTEQISYPEDGMSNEEFQEMVEAFIARQQRL 240

[Close]
BLAST of CsaV3_2G014930 vs. TAIR10
Match: AT4G34560.1 (unknown protein)

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-24
Identity = 84/230 (36.52%), Postives = 137/230 (59.57%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+ + F  ++ EK+  IL ++  R   +LFR  EL L++I+IS+ S     ++K S + F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLSF---PSVKISGDIF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK-DPSKKSLVA---DLYEEFIKNSEKN 120
           +  +V L+SPRFVF IGNAIVITL AKSG++S+  +PSK +  A   DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKK 120

Query: 121 NQKSPRTEIKHIDESRRKASISVEKIVNNP--KETRRYERSKSERMEVVPREKVDREMQR 180
                 T+ + + +      +S  +  ++   +  +  E +  E+   + R   ++ M+ 
Sbjct: 121 KPVVYATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNGEKN--MKRYVSEKHMRV 180

Query: 181 SETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEE 225
            +++K K +V +K+        EDGMSNE+FR  +EAFIARQ+R+Q++EE
Sbjct: 181 CDSDK-KVVVRVKKP-------EDGMSNEQFRTKIEAFIARQKRIQKDEE 217

[Close]
BLAST of CsaV3_2G014930 vs. TAIR10
Match: AT5G66440.1 (unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 69/247 (27.94%), Postives = 125/247 (50.61%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+S +F +++ EKA A+ ++ +F +I   FR  E+C+ L+ I    S LP  ++ S  + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R ++  + +P FVFL+GN+I                +  S   ++Y+ F+++ E  ++ S
Sbjct: 61  RRIAAVISTPLFVFLLGNSIXXXXXXXXXXXXXXXVA--SAETEIYQAFVRSVENRSKPS 120

Query: 121 PRTEIKHIDESRRKASIS----------------VEKIVNNPKETRRYERSKSE----RM 180
                + I    ++  ++                VE   ++   ++ Y RSKS+    + 
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSGKQS 180

Query: 181 EVVPREKVDREMQRSETEK-CKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRL 227
             +    + R +QRSETEK CK+           +Y ED +SNEEF++T+EAFIA+Q+  
Sbjct: 181 SNMVMMMMKRSLQRSETEKFCKETEXXXXXXXXXNYPEDDLSNEEFQKTIEAFIAKQRMF 240

[Close]
BLAST of CsaV3_2G014930 vs. TAIR10
Match: AT4G39190.1 (unknown protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.7e-06
Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0 

Query: 30  FRFIELCLILIVISRFSSHLPTALKNSTEYFRCLSVTLISPRFVFLIGNAIVITLFAKSG 89
           FR IE+ ++L+ +++ S  L    ++S+      SV L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 90  QFSAKDPSKKSLVADLYEEFIKNSEK 116
               ++   K    DLYE+F+  S +
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSR 113

[Close]
BLAST of CsaV3_2G014930 vs. TrEMBL
Match: tr|A0A0A0LIS8|A0A0A0LIS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180
           PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC
Sbjct: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180

Query: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF
Sbjct: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]
BLAST of CsaV3_2G014930 vs. TrEMBL
Match: tr|A0A1S3CDN2|A0A1S3CDN2_CUCME (uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 9.7e-102
Identity = 211/233 (90.56%), Postives = 219/233 (93.99%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKN TEYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+LVADLYEEFIKNSEKNNQKS
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 PRTE----IKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDRE-MQRS 180
           PRTE    IKHIDESR KAS+SVEK+VNNP+ET+RY+R KSE+MEVV REKVDRE +QRS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           ETEKCKKMVELKEGRRN SY ED MSNEEFRQTVEAFIARQQRLQREEE SEF
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]
BLAST of CsaV3_2G014930 vs. TrEMBL
Match: tr|B9RH74|B9RH74_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1447810 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.9e-49
Identity = 121/230 (52.61%), Postives = 165/230 (71.74%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+S N  +I+ +KANAI K+RQ +KIANLFRFIE+CL+L +ISRFS  LP A+KNS+EYF
Sbjct: 1   MDSFNICNIKLQKANAIKKHRQLQKIANLFRFIEICLVLALISRFSIGLPVAVKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           + L+V L SPRF+F++GNAIVITLFAKSGQFSA+D + K    D YEEF++ SE++    
Sbjct: 61  KDLTVILASPRFIFIVGNAIVITLFAKSGQFSAQDSTGKKSTNDFYEEFVRKSERS---- 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPK----ETRRYERSKSERMEVVPREKVDREMQRSE 180
            R   ++  E R+K S  V++ V        E ++Y+RS+S+++E   R    +E++R  
Sbjct: 121 -RGMHRYEVECRQKQSTCVQEKVTEEAVASLEIKKYQRSQSQKLEQANRSNSCKELRRVA 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELS 227
           TEKC++ V+  EG    SY ED MSNEEFR TVEAFIARQ+R++R+EE S
Sbjct: 181 TEKCRRSVDNSEGWMKISYPEDSMSNEEFRCTVEAFIARQKRIRRDEENS 225

[Close]
BLAST of CsaV3_2G014930 vs. TrEMBL
Match: tr|A0A2C9W0G0|A0A2C9W0G0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G073500 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.5e-49
Identity = 126/230 (54.78%), Postives = 163/230 (70.87%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M S N  +I+ EK NA+ K+RQ +K ANLFRFIE+CLIL +ISRFS  LP A+KNSTEYF
Sbjct: 1   MGSFNIINIKVEKENAMKKHRQLQKFANLFRFIEICLILALISRFSVGLPVAVKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           + ++V L+SPRFVF++GNAIVITLFAKSGQFS +DPS+K+   DLYEEF++ SE+ NQ  
Sbjct: 61  KDITVILLSPRFVFILGNAIVITLFAKSGQFSGQDPSEKNSRTDLYEEFVEKSER-NQIM 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPK----ETRRYERSKSERMEVVPREKVDREMQRSE 180
            R E      +R K S  VE IV        E++ Y+RS+SE+++ V   K   +++RS 
Sbjct: 121 QRYEA----GNRGKQSSCVECIVTEATCTSVESKNYQRSRSEKLDRVTINKPCIQLRRSA 180

Query: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELS 227
           TEKC+   +  EG    SY ED MSNEEFR TVEAFIARQ+R +++EE S
Sbjct: 181 TEKCRGSADSGEGWVKVSYPEDNMSNEEFRCTVEAFIARQKRFRKDEENS 225

[Close]
BLAST of CsaV3_2G014930 vs. TrEMBL
Match: tr|A0A2C9V0T5|A0A2C9V0T5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G085200 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 8.1e-48
Identity = 119/228 (52.19%), Postives = 161/228 (70.61%), Query Frame = 0 

Query: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60
           M+S +  +I+ EKANA+ K+RQ +KIAN FRF+E+ ++L +ISRFS  LP A+KNS+EYF
Sbjct: 1   MDSFSISNIKLEKANAMKKHRQLQKIANFFRFLEIFIVLALISRFSVQLPVAVKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120
           + L+V L+SPRFVF+IGNAIVITLFAKSGQFS +DPS K+   DLY+EF++ SE+  Q  
Sbjct: 61  KDLTVILVSPRFVFIIGNAIVITLFAKSGQFSGQDPSGKNSRTDLYDEFVEKSER-IQSL 120

Query: 121 PRTEIKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSETEKC 180
              E  + D         V +  +   E + Y+RS+SE+++   R K+ RE++RS TEKC
Sbjct: 121 HGYEAGNSDRQSSSVEYIVTEETSPSAEIKNYQRSESEKLDRGTRNKLCRELRRSATEKC 180

Query: 181 KKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 229
           ++ V   EG    SY ED MSNEEFR TVEAFIARQ+R +R+EE S +
Sbjct: 181 RESVGSGEGWMKISYPEDRMSNEEFRCTVEAFIARQKRFRRDEENSVY 227

The following BLAST results are available for this feature:
BLAST of CsaV3_2G014930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011649236.11.2e-114100.00PREDICTED: uncharacterized protein LOC105434603 [Cucumis sativus] >KGN61815.1 hy... [more]
XP_008460958.11.5e-10190.56PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo][more]
XP_022146107.15.2e-7573.25uncharacterized protein LOC111015401 [Momordica charantia][more]
XP_022986604.11.9e-7270.59uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima][more]
XP_022948013.14.9e-6561.85uncharacterized protein LOC111451717 [Cucurbita moschata][more]
BLAST of CsaV3_2G014930 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G34560.18.7e-2436.52unknown protein[more]
AT5G66440.11.5e-1527.94unknown protein[more]
AT4G39190.13.7e-0636.05unknown protein[more]
BLAST of CsaV3_2G014930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G014930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LIS8|A0A0A0LIS8_CUCSA7.6e-115100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1[more]
tr|A0A1S3CDN2|A0A1S3CDN2_CUCME9.7e-10290.56uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=... [more]
tr|B9RH74|B9RH74_RICCO1.9e-4952.61Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1447810 PE=4 SV=1[more]
tr|A0A2C9W0G0|A0A2C9W0G0_MANES9.5e-4954.78Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G073500 PE=4 SV=... [more]
tr|A0A2C9V0T5|A0A2C9V0T5_MANES8.1e-4852.19Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G085200 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025520DUF4408
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G014930.1CsaV3_2G014930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..177
NoneNo IPR availablePANTHERPTHR33640FAMILY NOT NAMEDcoord: 1..226
NoneNo IPR availablePANTHERPTHR33640:SF3SUBFAMILY NOT NAMEDcoord: 1..226
IPR025520Domain of unknown function DUF4408PFAMPF14364DUF4408coord: 64..88
e-value: 3.8E-6
score: 26.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G014930CSPI04G05380Wild cucumber (PI 183967)cpicucB208
CsaV3_2G014930CSPI02G12390Wild cucumber (PI 183967)cpicucB080
CsaV3_2G014930Cucsa.109470Cucumber (Gy14) v1cgycucB138
CsaV3_2G014930CmaCh02G003860Cucurbita maxima (Rimu)cmacucB0701
CsaV3_2G014930CmaCh20G008380Cucurbita maxima (Rimu)cmacucB0651
CsaV3_2G014930CmoCh20G008470Cucurbita moschata (Rifu)cmocucB0637
CsaV3_2G014930CmoCh02G003920Cucurbita moschata (Rifu)cmocucB0687
CsaV3_2G014930Cp4.1LG10g00630Cucurbita pepo (Zucchini)cpecucB0062
CsaV3_2G014930Cp4.1LG16g02520Cucurbita pepo (Zucchini)cpecucB0334
CsaV3_2G014930Cp4.1LG05g12750Cucurbita pepo (Zucchini)cpecucB0879
CsaV3_2G014930CsGy2G012390Cucumber (Gy14) v2cgybcucB064
CsaV3_2G014930Carg24155Silver-seed gourdcarcucB0334
CsaV3_2G014930Carg26472Silver-seed gourdcarcucB0506
CsaV3_2G014930Cla014578Watermelon (97103) v1cucwmB134
CsaV3_2G014930Cla016576Watermelon (97103) v1cucwmB166
CsaV3_2G014930MELO3C023313Melon (DHL92) v3.5.1cucmeB097
CsaV3_2G014930ClCG11G004240Watermelon (Charleston Gray)cucwcgB120
CsaV3_2G014930ClCG07G008620Watermelon (Charleston Gray)cucwcgB167
CsaV3_2G014930Lsi07G002470Bottle gourd (USVL1VR-Ls)cuclsiB151
CsaV3_2G014930MELO3C023313.2Melon (DHL92) v3.6.1cucmedB089
CsaV3_2G014930Cla97C11G210970Watermelon (97103) v2cucwmbB115
CsaV3_2G014930Bhi10G001596Wax gourdcucwgoB187
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CsaV3_2G014930CsaV3_4G005530Cucumber (Chinese Long) v3cuccucB083
The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G014930Cucumber (Chinese Long) v3cuccucB070
CsaV3_2G014930Cucumber (Chinese Long) v3cuccucB098
CsaV3_2G014930Silver-seed gourdcarcucB0346
CsaV3_2G014930Cucumber (Gy14) v2cgybcucB318
CsaV3_2G014930Cucumber (Gy14) v1cgycucB522
CsaV3_2G014930Cucumber (Gy14) v1cgycucB571
CsaV3_2G014930Cucurbita maxima (Rimu)cmacucB0019
CsaV3_2G014930Cucurbita maxima (Rimu)cmacucB0527
CsaV3_2G014930Cucurbita moschata (Rifu)cmocucB0007
CsaV3_2G014930Cucurbita moschata (Rifu)cmocucB0513
CsaV3_2G014930Cucurbita moschata (Rifu)cmocucB0590
CsaV3_2G014930Cucurbita pepo (Zucchini)cpecucB0289
CsaV3_2G014930Cucurbita pepo (Zucchini)cpecucB0680
CsaV3_2G014930Cucurbita pepo (Zucchini)cpecucB0961
CsaV3_2G014930Wild cucumber (PI 183967)cpicucB137
CsaV3_2G014930Wild cucumber (PI 183967)cpicucB384
CsaV3_2G014930Bottle gourd (USVL1VR-Ls)cuclsiB104
CsaV3_2G014930Bottle gourd (USVL1VR-Ls)cuclsiB134
CsaV3_2G014930Bottle gourd (USVL1VR-Ls)cuclsiB109
CsaV3_2G014930Melon (DHL92) v3.5.1cucmeB106
CsaV3_2G014930Melon (DHL92) v3.6.1cucmedB099
CsaV3_2G014930Watermelon (Charleston Gray)cucwcgB140
CsaV3_2G014930Watermelon (97103) v1cucwmB142
CsaV3_2G014930Watermelon (97103) v1cucwmB160
CsaV3_2G014930Watermelon (97103) v2cucwmbB126
CsaV3_2G014930Wax gourdcucwgoB154