CmoCh20G008470 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G008470
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Transmembrane protein, putative
Location	Cmo_Chr20 : 4263219 .. 4263914 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGGTCAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGCTTGATTCTCGTTGTGATCACGAGATTTTCTAGCAATCTGCCGAGCGCCTTCAAGAACTCTGGCGAGTACTTCCGGTGCTTGTCGGTGACATTGATCAGTCCTCGCTTTGTGTTTCTGATCGGAAACGCTATTGTAATCACTTTGTTTGCCAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCAAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGCGGCAACGGCAACAGCGATACCTCAATCGCAATAAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTGAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG

mRNA sequence

ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGGTCAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGCTTGATTCTCGTTGTGATCACGAGATTTTCTAGCAATCTGCCGAGCGCCTTCAAGAACTCTGGCGAGTACTTCCGGTGCTTGTCGGTGACATTGATCAGTCCTCGCTTTGTGTTTCTGATCGGAAACGCTATTGTAATCACTTTGTTTGCCAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCAAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGCGGCAACGGCAACAGCGATACCTCAATCGCAATAAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTGAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG

Coding sequence (CDS)

ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGGTCAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGCTTGATTCTCGTTGTGATCACGAGATTTTCTAGCAATCTGCCGAGCGCCTTCAAGAACTCTGGCGAGTACTTCCGGTGCTTGTCGGTGACATTGATCAGTCCTCGCTTTGTGTTTCTGATCGGAAACGCTATTGTAATCACTTTGTTTGCCAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCAAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGCGGCAACGGCAACAGCGATACCTCAATCGCAATAAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTGAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG

Homology

[Close]

BLAST of CmoCh20G008470 vs. TrEMBL
Match: A0A0A0LIS8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248720 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 8.5e-76
Identity = 165/232 (71.12%), Postives = 186/232 (80.17%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+VI+RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEK-NQKT 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEF++NSEK NQK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSE 180
            R EI    K ID+SR   +      +    E + Y+RS+SE++ VV RE   RE++RSE
Sbjct: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180

Query: 181 TEKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 232
           TEKCKK+V L E  RNR   ED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]

BLAST of CmoCh20G008470 vs. TrEMBL
Match: B9RH74_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1447810 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.8e-53
Identity = 127/227 (55.95%), Postives = 161/227 (70.93%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S N  +++  K NAI K+RQ++KIANLFRFIE+CL+L +I+RFS  LP A KNS EYF
Sbjct: 1   MDSFNICNIKLQKANAIKKHRQLQKIANLFRFIEICLVLALISRFSIGLPVAVKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + L+V L SPRF+F++GNAIVITLFAKSGQFSA+D + K S  D YEEFV+ SE+++   
Sbjct: 61  KDLTVILASPRFIFIVGNAIVITLFAKSGQFSAQDSTGKKSTNDFYEEFVRKSERSRGMH 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
           R E+E R KQ   S       T  A+  + EIK YQRS+S+K+    R N  +ELRR  T
Sbjct: 121 RYEVECRQKQ---STCVQEKVTEEAVASL-EIKKYQRSQSQKLEQANRSNSCKELRRVAT 180

Query: 181 EKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEE 228
           EKC++ V  SE       PED MSNEEFR TVEAFIARQ+R+RR+EE
Sbjct: 181 EKCRRSVDNSEGWMKISYPEDSMSNEEFRCTVEAFIARQKRIRRDEE 223

[Close]

BLAST of CmoCh20G008470 vs. TrEMBL
Match: B9HRK8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12160g PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.1e-50
Identity = 117/227 (51.54%), Postives = 161/227 (70.93%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S N   ++  K  AI K+R++RKIA+LFR IE+ ++L +I+RFS  LP A KNS EYF
Sbjct: 1   MDSFNITSIKIEKAKAIKKHRKIRKIASLFRLIEIGVVLALISRFSIQLPVAVKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + L+V L+SPRFVF++GN IVITLFAKSGQFS +D + KN   DLY+EFV+ SEK+Q+T 
Sbjct: 61  KDLTVILVSPRFVFVLGNMIVITLFAKSGQFSGQDSNGKNPSTDLYDEFVEKSEKSQETH 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
           + E E R KQ+         DTS ++++    K Y RSESEK+   +R +  RELRRS T
Sbjct: 121 QYEAECREKQVTYVEYKVTEDTSTSLER----KKYHRSESEKL---ERPDSSRELRRSAT 180

Query: 181 EKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEE 228
           +KC+K +  ++E+    SP+D+MSN+EFR T+EAFIARQ+R   +EE
Sbjct: 181 DKCRKTIDSAKESEKSSSPKDKMSNDEFRSTIEAFIARQKRFLIDEE 220

[Close]

BLAST of CmoCh20G008470 vs. TrEMBL
Match: B9H0T3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s16460g PE=4 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-49
Identity = 119/227 (52.42%), Postives = 151/227 (66.52%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S N  +++  K NAI K+R+++KIA+LFR IE+ L+L +I+RFS  LP A +NS EYF
Sbjct: 1   MDSFNITNIKIEKANAIKKHRKIQKIASLFRLIEIGLVLALISRFSIQLPVAVRNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + L+VTL+SPRFVF++GN IVITLFAKSGQFS +D + KNS  DLYEEFV+ SEK+Q T 
Sbjct: 61  KDLTVTLVSPRFVFVLGNVIVITLFAKSGQFSCQDSNGKNSSTDLYEEFVEKSEKSQGTH 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
             E E R KQ                        Y RS+SE++       P RELRRS T
Sbjct: 121 HYEAECREKQ-----------------------KYHRSQSERLKRPNSNKPCRELRRSAT 180

Query: 181 EKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEE 228
           E C+K +   EE   RP PED+MSNEEFR T+EAFIARQ+R R +EE
Sbjct: 181 EGCRKSIDSDEELEKRPCPEDKMSNEEFRCTIEAFIARQKRFRIDEE 204

[Close]

BLAST of CmoCh20G008470 vs. TrEMBL
Match: M5VUI2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025405mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 124/232 (53.45%), Postives = 156/232 (67.24%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S+NFYD++A K NAIL+YRQ+RKIANLF  IE+ ++L++++RFS  LP A KNSG YF
Sbjct: 1   MDSINFYDIKAEKANAILRYRQLRKIANLFWLIEVFVVLLLLSRFSLQLPHAVKNSGFYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + +S  ++SPRFVF++GN IVI L  KSG+FS KD S   + ADLY+EFV NSEKNQK R
Sbjct: 61  QDISGFVVSPRFVFVVGNIIVIILLVKSGRFSGKDSS---TGADLYDEFVHNSEKNQKIR 120

Query: 121 RAEIEYRVKQ--IDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRS 180
              IEY   Q   +DS  +    T        EIK++ RS+SE +     +N  R LRRS
Sbjct: 121 SDAIEYHAIQNRAEDSTASEQPHTISR-----EIKNFTRSQSENLEREACKNSRRLLRRS 180

Query: 181 ETEKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 231
           ETEK KK V   E       PED MSNEEFR  +EAFIARQQ+ R +EEF V
Sbjct: 181 ETEKFKKRVEYGERLAESAYPEDSMSNEEFRSKIEAFIARQQKFRLQEEFSV 224

[Close]

BLAST of CmoCh20G008470 vs. TAIR10
Match: AT4G34560.1 (AT4G34560.1 unknown protein)

HSP 1 Score: 115.2 bits (287), Expect = 5.5e-26
Identity = 83/235 (35.32%), Postives = 134/235 (57.02%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+ + F  ++  K   IL ++ +R   +LFR  EL L++++I++ S   PS  K SG+ F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLS--FPSV-KISGDIF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK-DPSKKNSVA---DLYEEFVQNSEKN 120
           +  +V L+SPRFVF IGNAIVITL AKSG++S+  +PSK  + A   DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEK- 120

Query: 121 QKTRRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELR 180
               +  + Y  K     + +G        K++   +       E +  ++  N  + ++
Sbjct: 121 ----KKPVVYATKTEQLKKPSGG-------KRVSFGRSQSHKAFEAVKPLESTNGEKNMK 180

Query: 181 RSETEKCKKIVRLSEETRNR-PSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 231
           R  +EK  ++    ++   R   PED MSNE+FR  +EAFIARQ+R++++EE  +
Sbjct: 181 RYVSEKHMRVCDSDKKVVVRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDEEHLI 220

[Close]

BLAST of CmoCh20G008470 vs. TAIR10
Match: AT5G66440.1 (AT5G66440.1 unknown protein)

HSP 1 Score: 98.2 bits (243), Expect = 7.0e-21
Identity = 83/249 (33.33%), Postives = 131/249 (52.61%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S +F +V+A K  A+ ++ +  +I   FR  E+C+ L+ I    S LP   + SG + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           R ++  + +P FVFL+GN+IV+ L  KS   +    +  ++  ++Y+ FV++ E   K  
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTT--TAVASAETEIYQAFVRSVENRSKPS 120

Query: 121 RAE----IEYRVKQID----DSRGNGNSDTSIAIKKIG-----EIKHYQRSESEKIGVVQ 180
             +    I Y  KQ+     DS  N   D ++   +I        K Y RS+S+  G  Q
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSDVSG-KQ 180

Query: 181 REN-----PHRELRRSETEK-CKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQR 231
             N       R L+RSETEK CK+     +    +  PED +SNEEF++T+EAFIA+Q+ 
Sbjct: 181 SSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRM 240

[Close]

BLAST of CmoCh20G008470 vs. TAIR10
Match: AT2G21560.1 (AT2G21560.1 unknown protein)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 69/278 (24.82%), Postives = 134/278 (48.20%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLF-RFIELCLILVVITRFSSNLPSAFKNSGEY 60
           M+S++    +  KM  ++K  + + + +LF R IE+ L+++ + +    L    ++SG  
Sbjct: 1   MDSLSTQKAKPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-- 60

Query: 61  FRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQ-- 120
              L+  LI+    F++GN IVIT+  K G F+ ++   + +  D Y+EFV+ S + +  
Sbjct: 61  ---LASFLINRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERR 120

Query: 121 -------KTRRAEIEYRVKQ-IDDSRGNGNSD---TSIAIKKIGEIKHYQRSESEKIGVV 180
                  + +++E+E   KQ I+++R   + +    S A   + E +  Q +E ++  + 
Sbjct: 121 LHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLK 180

Query: 181 QRENPHRELRRSETEKCKKIVRLSEE--TRNRPSPE------------------------ 231
           + E   R+    E+EK    V+   +   +N+ SP                         
Sbjct: 181 KSEISGRQSSGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSCVQLKR 240

[Close]

BLAST of CmoCh20G008470 vs. TAIR10
Match: AT4G39190.1 (AT4G39190.1 unknown protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-06
Identity = 62/201 (30.85%), Postives = 96/201 (47.76%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAIL-KYRQVRKIANLF-RFIELCLILVVITRFSSNLPSAFKNSGE 60
           M+S +    ++ KM   L K  +V  I +LF R IE+ ++LV + + S  L   F++S  
Sbjct: 1   MDSFSTQKPKSRKMKKRLAKKSRVEIILDLFFRAIEIVVVLVTLAKLSYELVVTFEDSS- 60

Query: 61  YFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNS----- 120
                SV L +    F+IGNAIVI L AKSG    ++   K    DLYE+FV  S     
Sbjct: 61  ---VASVILANRSLAFVIGNAIVIALIAKSGILLNQEHDPKCKSNDLYEDFVLESSRRGG 120

Query: 121 ----EKNQKTRRAEIEYRVKQ-IDDSRGNGNSD----TSIAIKKIGEIKHYQRSESEKIG 180
               E     +++E E   KQ I +++   N +    T   +KK    K  +R  SEK  
Sbjct: 121 FSQDEMRSGEKQSEAENEAKQSITENKAKENEEKQSITESRVKKSVTEKKTKRIISEK-- 180

Query: 181 VVQRENPHRELRRSETEKCKK 186
            V++  P +  ++S +   +K
Sbjct: 181 KVKQSKPEKLTKQSTSVNREK 195

[Close]

BLAST of CmoCh20G008470 vs. NCBI nr
Match: gi|659122080|ref|XP_008460958.1| (PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo])

HSP 1 Score: 301.2 bits (770), Expect = 1.5e-78
Identity = 170/233 (72.96%), Postives = 188/233 (80.69%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+VI+RFSS+LP+A KN  EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEK-NQKT 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKN VADLYEEF++NSEK NQK+
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRE-LRRS 180
            R EI Y++K ID+SRG  +      +    E K YQR +SEK+ VV RE   RE L+RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 232
           ETEKCKK+V L E  RN   PED MSNEEFRQTVEAFIARQQRL+REEEF  F
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFSEF 233

[Close]

BLAST of CmoCh20G008470 vs. NCBI nr
Match: gi|778669377|ref|XP_011649236.1| (PREDICTED: uncharacterized protein LOC105434603 [Cucumis sativus])

HSP 1 Score: 291.6 bits (745), Expect = 1.2e-75
Identity = 165/232 (71.12%), Postives = 186/232 (80.17%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           MESVNFYD+R  K NAILKYRQ RKIANLFRFIELCLIL+VI+RFSS+LP+A KNS EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEK-NQKT 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKK+ VADLYEEF++NSEK NQK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSE 180
            R EI    K ID+SR   +      +    E + Y+RS+SE++ VV RE   RE++RSE
Sbjct: 121 PRTEI----KHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180

Query: 181 TEKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF 232
           TEKCKK+V L E  RNR   ED MSNEEFRQTVEAFIARQQRL+REEE   F
Sbjct: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELSEF 228

[Close]

BLAST of CmoCh20G008470 vs. NCBI nr
Match: gi|764523615|ref|XP_011457733.1| (PREDICTED: uncharacterized protein LOC105349549 [Fragaria vesca subsp. vesca])

HSP 1 Score: 222.2 bits (565), Expect = 9.1e-55
Identity = 129/231 (55.84%), Postives = 164/231 (71.00%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S+NFYD++A K NAIL+YRQ+RKI N+FR +E+ ++L++ +R S  LP+A KNSG YF
Sbjct: 1   MDSINFYDIKAEKTNAILRYRQLRKIGNIFRLLEVFVVLLLFSRLSLQLPNAVKNSGFYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           R +S  L SPRFVF++GN IVI LFAKSG+FSAKD S   S  D Y+EFVQNSEKNQK R
Sbjct: 61  RDISGFLFSPRFVFVVGNIIVIILFAKSGRFSAKDSSTAGSGGDFYDEFVQNSEKNQKIR 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
           R EI+Y+V Q     G   +    ++    E+K+Y RS+SE +     +N  R LRRSET
Sbjct: 121 RDEIQYKVNQSTYDGGIVPAQVHSSL----EVKNYTRSQSENLEREACQNSRRLLRRSET 180

Query: 181 EKCKKIVRLSEETRNRP-SPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 231
           EK KKIV+  E+    P  PEDRMSNEEFR  VEAFIARQQ+ R +EE+ V
Sbjct: 181 EKFKKIVKSDEKKSAEPVFPEDRMSNEEFRCKVEAFIARQQKFRLQEEYSV 227

[Close]

BLAST of CmoCh20G008470 vs. NCBI nr
Match: gi|255543741|ref|XP_002512933.1| (PREDICTED: uncharacterized protein LOC8260763 [Ricinus communis])

HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52
Identity = 127/227 (55.95%), Postives = 161/227 (70.93%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S N  +++  K NAI K+RQ++KIANLFRFIE+CL+L +I+RFS  LP A KNS EYF
Sbjct: 1   MDSFNICNIKLQKANAIKKHRQLQKIANLFRFIEICLVLALISRFSIGLPVAVKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + L+V L SPRF+F++GNAIVITLFAKSGQFSA+D + K S  D YEEFV+ SE+++   
Sbjct: 61  KDLTVILASPRFIFIVGNAIVITLFAKSGQFSAQDSTGKKSTNDFYEEFVRKSERSRGMH 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
           R E+E R KQ   S       T  A+  + EIK YQRS+S+K+    R N  +ELRR  T
Sbjct: 121 RYEVECRQKQ---STCVQEKVTEEAVASL-EIKKYQRSQSQKLEQANRSNSCKELRRVAT 180

Query: 181 EKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEE 228
           EKC++ V  SE       PED MSNEEFR TVEAFIARQ+R+RR+EE
Sbjct: 181 EKCRRSVDNSEGWMKISYPEDSMSNEEFRCTVEAFIARQKRIRRDEE 223

[Close]

BLAST of CmoCh20G008470 vs. NCBI nr
Match: gi|743885205|ref|XP_011037493.1| (PREDICTED: uncharacterized protein LOC105134686 [Populus euphratica])

HSP 1 Score: 213.0 bits (541), Expect = 5.5e-52
Identity = 120/227 (52.86%), Postives = 158/227 (69.60%), Query Frame = 1


Query: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60
           M+S N  +++  K NA+ K+R+++KIA+ FR IE+ L+L +I+RFS  LP A +NS EYF
Sbjct: 1   MDSFNITNIKIEKANALKKHRKIQKIASFFRLIEIGLVLALISRFSIQLPVAVRNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120
           + L+VTL+SPRFVF++GN IVITLFAKSGQFS +D + KNS  DLYEEFV+ SEK+Q T 
Sbjct: 61  KDLTVTLVSPRFVFVLGNVIVITLFAKSGQFSCQDSNGKNSSTDLYEEFVEKSEKSQGTH 120

Query: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRELRRSET 180
             E E R KQ+  +      D   ++    E K Y+RS+SE++       P RELRRS T
Sbjct: 121 HYEAECREKQVTHAEHKVTEDNPTSL----ESKKYRRSQSERLKWPNSNKPCRELRRSAT 180

Query: 181 EKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEE 228
           E C+K +   EE   RP PED+MSNEEFR T+EAFIARQ+R R +EE
Sbjct: 181 EGCRKNIDSFEELEKRPCPEDKMSNEEFRCTIEAFIARQKRFRIDEE 223

The following BLAST results are available for this feature:

BLAST of CmoCh20G008470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh20G008470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIS8_CUCSA	8.5e-76	71.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G248720 PE=4 SV=1	[more]
B9RH74_RICCO	7.8e-53	55.95	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1447810 PE=4 SV=1	[more]
B9HRK8_POPTR	6.1e-50	51.54	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12160g PE=4 SV=1	[more]
B9H0T3_POPTR	1.0e-49	52.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s16460g PE=4 SV=2	[more]
M5VUI2_PRUPE	2.3e-49	53.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025405mg PE=4 SV=1	[more]

BLAST of CmoCh20G008470 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34560.1	5.5e-26	35.32	unknown protein	[more]
AT5G66440.1	7.0e-21	33.33	unknown protein	[more]
AT2G21560.1	3.8e-11	24.82	unknown protein	[more]
AT4G39190.1	1.7e-06	30.85	unknown protein	[more]

BLAST of CmoCh20G008470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659122080\|ref\|XP_008460958.1\|	1.5e-78	72.96	PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo]	[more]
gi\|778669377\|ref\|XP_011649236.1\|	1.2e-75	71.12	PREDICTED: uncharacterized protein LOC105434603 [Cucumis sativus]	[more]
gi\|764523615\|ref\|XP_011457733.1\|	9.1e-55	55.84	PREDICTED: uncharacterized protein LOC105349549 [Fragaria vesca subsp. vesca]	[more]
gi\|255543741\|ref\|XP_002512933.1\|	1.1e-52	55.95	PREDICTED: uncharacterized protein LOC8260763 [Ricinus communis]	[more]
gi\|743885205\|ref\|XP_011037493.1\|	5.5e-52	52.86	PREDICTED: uncharacterized protein LOC105134686 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025520	DUF4408

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh20G008470.1	CmoCh20G008470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 64..88 score: 3.
None	No IPR available	unknown	Coil	Coil	coord: 205..225 scor
None	No IPR available	PANTHER	PTHR33640	FAMILY NOT NAMED	coord: 2..230 score: 5.0
None	No IPR available	PANTHER	PTHR33640:SF3	SUBFAMILY NOT NAMED	coord: 2..230 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh20G008470	Cucsa.109470	Cucumber (Gy14) v1	cgycmoB0252
CmoCh20G008470	CmaCh20G008380	Cucurbita maxima (Rimu)	cmacmoB551
CmoCh20G008470	CmaCh02G003860	Cucurbita maxima (Rimu)	cmacmoB606
CmoCh20G008470	Cla016576	Watermelon (97103) v1	cmowmB534
CmoCh20G008470	Csa2G248720	Cucumber (Chinese Long) v2	cmocuB531
CmoCh20G008470	MELO3C023313	Melon (DHL92) v3.5.1	cmomeB495
CmoCh20G008470	ClCG11G004240	Watermelon (Charleston Gray)	cmowcgB476
CmoCh20G008470	CSPI02G12390	Wild cucumber (PI 183967)	cmocpiB536
CmoCh20G008470	Lsi10G003860	Bottle gourd (USVL1VR-Ls)	cmolsiB491
CmoCh20G008470	Cp4.1LG16g02520	Cucurbita pepo (Zucchini)	cmocpeB517
CmoCh20G008470	Cp4.1LG05g12750	Cucurbita pepo (Zucchini)	cmocpeB534
CmoCh20G008470	MELO3C023313.2	Melon (DHL92) v3.6.1	cmomedB568
CmoCh20G008470	CsaV3_2G014930	Cucumber (Chinese Long) v3	cmocucB0637
CmoCh20G008470	Cla97C11G210970	Watermelon (97103) v2	cmowmbB544
CmoCh20G008470	Bhi10G001596	Wax gourd	cmowgoB0679
CmoCh20G008470	CsGy2G012390	Cucumber (Gy14) v2	cgybcmoB209
CmoCh20G008470	Carg26472	Silver-seed gourd	carcmoB0636
CmoCh20G008470	Carg24155	Silver-seed gourd	carcmoB0413

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh20G008470	CmoCh02G003920	Cucurbita moschata (Rifu)	cmocmoB404

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh20G008470	Silver-seed gourd	carcmoB0434
CmoCh20G008470	Cucumber (Chinese Long) v3	cmocucB0674
CmoCh20G008470	Watermelon (97103) v2	cmowmbB550
CmoCh20G008470	Wax gourd	cmowgoB0677
CmoCh20G008470	Cucurbita moschata (Rifu)	cmocmoB382
CmoCh20G008470	Cucumber (Gy14) v1	cgycmoB1038
CmoCh20G008470	Wild cucumber (PI 183967)	cmocpiB567
CmoCh20G008470	Cucumber (Chinese Long) v2	cmocuB561
CmoCh20G008470	Melon (DHL92) v3.5.1	cmomeB503
CmoCh20G008470	Watermelon (Charleston Gray)	cmowcgB485
CmoCh20G008470	Watermelon (97103) v1	cmowmB516
CmoCh20G008470	Cucurbita pepo (Zucchini)	cmocpeB514
CmoCh20G008470	Cucurbita pepo (Zucchini)	cmocpeB521
CmoCh20G008470	Bottle gourd (USVL1VR-Ls)	cmolsiB500
CmoCh20G008470	Cucumber (Gy14) v2	cgybcmoB940
CmoCh20G008470	Melon (DHL92) v3.6.1	cmomedB579