CsaV3_2G007740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G007740
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionnuclear pore complex protein NUP43
Locationchr2 : 4014610 .. 4021507 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTTTAGAATAAGGTTATAAAGTAAACCCTAAACCCTAATAATAATAAAATAATTAAGTACCCCTAAACTTAATTTGGCCGGACCGGCGTCTCAAAAAGTTAAATTCCGACGTCATTCTCATTTCTCAATCTAAGTTCCCTTAAACCCTAACAATGGCGATCGCTAGTCCCCAACAGCAACCGCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTAGCCGGTTTGCCGTCATTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGTCCCTCATTCGACATGGATTTCACCTTCAAGAGTATCTTCACTTAAAACATCTCAACTCCACCGAAACCCTCTTGTTTTCGCTTCGACTTACACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTTGACTCGGAGCTTTCGGTACCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGGGTGAGTTTGGTGAGCGTTGGGGAATCTGGATTGAGTTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCTGTGAAATGGGCATCGCCTACCGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCAATTGGTATGTGAATTTGTTTATCTTCCCTTGCATCCTATCATATGCATTGGAACATTTAGAACTAGGACTAGAATAGAGTTCTGGGAATCACCCAGCTTTCTAAAACTGGAATTGGCTTGCATTTGGTAAATCAGAGGCTGTTGCCTGTATGAGAGAGCGTTCCTACATTATGATTGTAGAAAAATTAAGAAGTCATTGCGAAAAAGTAATTGGTTCTTCTCTAGGTTGGCTAGAAATTTTAGGATATGAAACTTTGAGTTGATAGTTGAATCTTCAAAAGTAAAAGGTGTCGAAGTTGACAAACACATCTGCTGAATTCCTTATGCCAATGTTGCAGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGTAAAATCTGTTATATTTCTTTCATATTTCTATATGATACTCAAGCAGTCATAGTTACGTTTGTTTATTTATGTTCTGCAAAAGATCTTTGAGTGTTGAATTGTGCTTTTTTTATAACTTAATATATTATATGGGTTCTTCCAAAATATTGTAAACTGGACCAAAATATTCACAAATATACCAAAATTTCACTATCTGTCTTCACATATAGAGTCTATCATGATCTATTGATGATAGATAGTGAAATTTTGCTATATTTGTAAATATGAGTAGCTTTGTCATTTAAAACAATTTTCCATATTATTATTATTATATTTAGTATTTAATATTTTCATTTTCATTTTTTTTTTAAATTAAGAAGCTATCTCACTAATAAATGAATGGAGCTAACTCCAAGCACCTAAAGAAGAACTACAACAAGATCTGGAATTGAAAATAAAAAAGGATAAGTTGTGATGAACAAACACTTTTCTAGCTTTACACCAAAAGAAAGTAGTAGAAAGAACCAAATTCATGAATAGATAAAAAGAGGAGGAAGTATCTCTGAAAAGACGACCATTGCCTTTACCCCAAAGATGCCAAAAGAAAGCCTGCATAAGGCTAACCACAATGCCTTCATGCATCATAGGATATCCCACGATTCTATCTAGACAGTAGCTAGTGGATGAAAAACATAGTTAGGGAGCAACAAATACCAATCAAAAGTATCCAAAATGACAAGCCAATGATGGGAAGCAAAAGGATGATGCGTGAAGAGATGACTAGTAGTCTCATCACTAGAGTTGCACATAACACACTAGGTAGGGTACAAGTGCATATAAGGCAAGGCATTCACTGCTGCAATCGACCTGCTGTTCCAAGACTAAGCTTTCCAAAGAAATTGGGATGATGATCCTTCCAAATCATCATATAAAGATATTTGAAAAGAAGATATGCATGATTCACCAAATCTTCCACAAGCGATTTCACATAGTATTTCATAGAAGGTTCAAGAGGGGGTCCATGATTCAGAAGAGTGTCAAAAGTGGATTGGGGACAAAAGATGAGAAAGACTACCCCACTCGGTAGTTCCCAAGTCATTAAAATTTCTGCATAGATTTTTTTGTTTGAACAAGAAACAAACCTCTTCATTAAGATAATGATATGAGGCTAATGCTCAAAGTACAATGGAAATAACAAGCATAAAGCTACAAATCTGATGTAAACTCTTCTGTTATATTTCATCGTTAAGCTACAAGTATTGTTATGCTTTAATTCATTGTTAGGCTTCAATTCATTGTTAGTTAACTACCTAGTTAGTTACTATGTAACCAACCATTTTTCCTATGAATAAACTATCTTCTCTCACTTTGAGAGGCAGAACATACACTCAAATAAAGGACTCTTTGGTTCACACCAAATTGGTATCAGAGCGCTAACAGTTTATAGGCCAAATGGCTGTTCGATGTGCTAACTTGGCAGCAGCAAAGCAACTTGCTCAAAACCACTGTCTTTCTTTTCCTCAAGTATAGCCACTGTCTTTCTTTTGGGACAGGCATCTGAGAGATGGCCAGTTTGACCTTAGTGAAAACACTTGCTTAGATTCGGCCTTTGGTAGGCATTTTCTGCTTGCTTCTTAGGGACTACTTCAGCCTTCTTCCCATTCATTTCATTAGTTTTATCCTTCTCTTGATAACGAGTCAGAGAGGATTGTGTTGCAACCGGATTGGGGTTAGTGTTCCATGGTCCCTTCTTTGTGTTTTTCTTCAAATTCAACCCAATAATTTCTTCAACAGACTTTGCATAGGTAATAGCATCAACAAGACTTAAAAAAGGTTGTAACTTTACCTTTTCTTTGATGTCAAACCTTAATCCTTCTACAAGCTGGGCAATAAGGTGTTGCTCATTCTCCATTAGATTGGTTCTTGCGCTCAACCGGTGAAATTTCTCTATATAATCAACAACTGTTCTTGCTCCTTGCCAGCAATTATGGTACTGATTATAAAGAGTCTACTTATAATTGGGATGAAGGAAACGAGCCTTCATTAGTTTCTTATAATTGAAAGCATACACAAGCATACAAAAAAAAACCCGCCCACCAAAACACCCCAACTAGTAGAAGGGGGACCAACTAAGTAAAAAGTCACCTATAGAATAATCACAAAAAAACTCTAAATTGAAGCCCTAAGGAAACATGAAATCTAGCCAAAGGCCAAATTTCACTATAATAGCACACACCTGACCACCCAGCAAAATTGACAACAAGCTCCTACAGGAAGGAGCTCCACACTGCCCTCGCAATCTGACAGTCCCAGAAAGGCAGAAAAAATGATCAAGATCTTCCTCCGCCTTTCGACAAAGCATACAACAAAAAAGGACTAAAAAGGCCGACAAGCAAAGTCCTTTTCCTAACAAGCCTATTCACAGTGTTAACATGCCCAAGCAATACTTGCCTGATAAAGAACCTAACTTTCTTGGGAACCTTCGTCTTCCAAACCACATCAAAAACCGACTCAGAGTATGAAAACGAATCTAACAAAAGACTAAACAGGGACTTATTCGTGAAACCTCTACTAGGATTAGGATTCCACACCATTGGCCTTTGGTAGCCACTTTCCTTTGTATCAAATCTCCAAATCCACTTATGTACTAAAGCATCATTACGTTGCTGAAAATTTCATATACCCATACCACCCATCAATTTTGGAAAATAGGTAATCTCTAAATTCACATTAGGTGTACTGCCATCACCATGAGAGTTTTCCCAAAAACAATCTCAAGTTAATTTGACTAGAATCTTTGTAACCTTGGGAGGAGATAGAAACAAAGATGAATAAGTTGGCATACTAGCTAGAGTAGATTGGATAAACATATGTGATATGTCTACCTTCCTATGAAATAAAAGCATACTTTAAATTATGAAGCTTGGCTGGATGCGCCCAATGACAGGGTGCTAAAAGGAAACAATCTTAGAGTTGCCACCCAAGGGAAGACTTAGGTATGGCGATGGCCAATGAACCTGTTAGCAACAAAATGTTGTCTCATAATCGTCAATACAAATCCCAAGCAATTCACTATTAGAGAGATTGTGTTTTTAAGCCAGAGACCTTCTAACAAATATTAATAATCTCAAAAAGATGTACCGAGGTAGTTGAAAACAAAGGGTGTCATCAAACCTGCCATGTTACCTAGACGAGCACTATGGGCCATAAGTCAACTAAGGCAATCCAAAAGCACTATAAATAATAAGCACGAAAGAAGATCACCTTAATGCACTCCACAACATGGAGCCACTTATATTTTCGTCAACCTCATTGAGCCACTTCAATTTGTAGTGTTGATGTCAATAAATATGCTCGACTTGTCAGTAATTCAATTTGTTCTTGAAGATTCCTACGAGAGATAATTTGATCATGAAATAAAGGACAAGTGTCTTCCAAACTTGAAATTGCAGGGCTCTTTGCAAAGGGTGCTGAAGGAATGGGCAAGCCGGTCAAGAGCTTTTCAGGATAGTGAAATGGTTTGGTGGATAAGAATAATCTTTCTTGTTCAATTATCTTGGTCTGAGTGCCCCTTGAGGTTTCTTAAATGGCAATAGAGGATTTTTTCTGATTAATAAGGATTGATCGGGTGGTGAGGGTCTGATAAGAAATGGTTGCAGTAAAAGGCATGGTTGCTTGAGACGATTATGGCTCAAGATGAGAAGAGAGAGGACGTTTCATTACATTAAATATGGGTCTCAAGCCTTATTGCACTCTTCAATCAAAGTTTTCAAACTTAATATTTCTATCCTAAAACTTTGTGAGAGAGTTTCTTTACTCTCTTCCATTTGTGATATAATAAAAATGTTCCGATACCAAATGATGTGAAAACTCTAGTGATAACTAGGAACTCTTGGGAGACGTGAGCTAAGTCACAAACACTAAAACTCCCAACTCCATTTGATTTCAACTCTAAGTTTAGGTTTGATGTGGAGAGTCTTAGGATCAAAATCACAAGAGAAAGATCAAGGTTTTAGCCCTAAAGTTGAACACTCCACAAGATTGAATGATTAATCCTACTTGAATGTCCTTGACGTCAAACTTGAAAGGAAAAGTGGAAAGGGTAAAACTCAATTCATCACACTCTATCCTCAACAGCTTAATGCTAATGGCAAGGCTTCCGATGGTTTGCCAACAAAATCCTAAATTCACATCATCAACATGACAAAAAGACTAACCTTGGCCTTTTTAATAACGTTTAGAAAGGAAAGGATAAAATTGGATCAAAATTATTGAATAAAAAATCTAAAGACCTTGGCAGTTCATATCAATTCAGTTTGGATAGTTGCTAAATGAGCCATCTGTCAAACTCCTCAATAGTCTTCTTGATCTTATTCTTTTAGTAGATTAATTTGGCAGAGTTATTGAGCTATTTAATAAAATTAAATCAGACACACAAACATTGCCCGCAGACTATTTTATGCGACTGGTGTTGTCTACTTTGCCTGTGATGTTCAGATCTCCAGTTCTAAATGAAATTGTGTTGCCCCTTAACTGTGCAAATTGGTTTCTCATCTAAAAGTGTCGTGACTTGTTCCATATTTCTTTTTCTGCTCTTCATCTTTGATATTAGAGTGCTTATTATTTCTCATGTTAGGCAGGGGGCTCTTTTGGGACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGTATGAGCTGGTGCTGTACCCCTGTTTGGTTGGCAAGTTAACCATTGTTTATCCAACGTCATTTTGTTGGTTTATATTGTTTCTGTTTTCTAATGCCTGAAAAGAATTATTTTCTAGTCCATATTGCTTAATTTTTTTAATTATGTCACTTTTAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTAACCGTCAACATCCATCAGTAAGTTTCCCATATACTATTTTATGCAAACTTGTTTTGTGTACTTGTGATGATAAGATTTCTAGTTCCAACTGAAATTGTGTGTTGTCCCTTAACTGTGAAAATTGGCATCTTATGTGAAAGATCTGTGAGGGTTTAGGTTGGGGTAGCGTGGCTACGTTTTGAGACTCTCTAAATATGTTATGCAGGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGATTTTCAGAATCAGAAGTCATCGTTCTTCCCAAATTATCAGGTTCCAATCCACTATATAAATTCCTTCAACGATTTAAGGAGTATCCTTAGCTTTCTATCTCTCATTGAGTGCATGCAATTTCTTAGCTTTAGGCTCATGTAAATTTGGCTGTGTTTACCACATAATTGGAACTCAATTTTGATATGAATTTTCATACTGGTCAGAGACCATATTAGGGGGATATTTATGATATTATTTTGCTTTGTATTTTATATGTATTTAACCTGTTCTTCATTCAACTTCTCAGCTTGACGCTTTCACTTTTAATTTTTTTTATACCAAATAGAACAACTTTTTCTCCCAATATAGTGTTACAGAACGTAAAATCTTTGCTATATCGAATATTTTTTATTTGG

mRNA sequence

ATGGCGATCGCTAGTCCCCAACAGCAACCGCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTAGCCGGTTTGCCGTCATTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGTCCCTCATTCGACATGGATTTCACCTTCAAGAGTATCTTCACTTAAAACATCTCAACTCCACCGAAACCCTCTTGTTTTCGCTTCGACTTACACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTTGACTCGGAGCTTTCGGTACCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGGGTGAGTTTGGTGAGCGTTGGGGAATCTGGATTGAGTTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCTGTGAAATGGGCATCGCCTACCGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCAATTGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGGACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTAACCGTCAACATCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGA

Coding sequence (CDS)

ATGGCGATCGCTAGTCCCCAACAGCAACCGCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTAGCCGGTTTGCCGTCATTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGTCCCTCATTCGACATGGATTTCACCTTCAAGAGTATCTTCACTTAAAACATCTCAACTCCACCGAAACCCTCTTGTTTTCGCTTCGACTTACACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTTGACTCGGAGCTTTCGGTACCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATGGGGGAGGTGAATGTCTGACTGTTTCGGAAGATGGACGGGTGAGTTTGGTGAGCGTTGGGGAATCTGGATTGAGTTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCTGTGAAATGGGCATCGCCTACCGAGTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCAATTGGGCGTCTGGTATAGTTCACTGCATTGATATCCATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGGACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAGCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACTAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTAACCGTCAACATCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTGTCAAGACCTTGA

Protein sequence

MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKMLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
Homology
[Close]
BLAST of CsaV3_2G007740 vs. NCBI nr
Match: XP_004144716.1 (PREDICTED: nuclear pore complex protein NUP43 [Cucumis sativus] >KGN61069.1 hypothetical protein Csa_2G036670 [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 2.6e-206
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 350

[Close]
BLAST of CsaV3_2G007740 vs. NCBI nr
Match: XP_008452472.1 (PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo])

HSP 1 Score: 705.7 bits (1820), Expect = 8.0e-200
Identity = 337/349 (96.56%), Postives = 345/349 (98.85%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 350
           GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]
BLAST of CsaV3_2G007740 vs. NCBI nr
Match: XP_022937892.1 (nuclear pore complex protein NUP43 [Cucurbita moschata])

HSP 1 Score: 676.4 bits (1744), Expect = 5.2e-191
Identity = 320/350 (91.43%), Postives = 336/350 (96.00%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+ P S W SPSR+SSLKTSQ ++NPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSFWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK +WASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           GI+TSIEQGK+PVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSRP
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP 350

[Close]
BLAST of CsaV3_2G007740 vs. NCBI nr
Match: XP_023538014.1 (nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 673.3 bits (1736), Expect = 4.4e-190
Identity = 319/350 (91.14%), Postives = 335/350 (95.71%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+ P S W SPSRVSSLKTSQ ++NPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK +WASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           GI+TSIEQGK+PVELLAEPCAINGFDI+RQ PSEVICNLEWESVAILSRP
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 350

[Close]
BLAST of CsaV3_2G007740 vs. NCBI nr
Match: XP_022969681.1 (nuclear pore complex protein NUP43 [Cucurbita maxima])

HSP 1 Score: 666.4 bits (1718), Expect = 5.4e-188
Identity = 314/350 (89.71%), Postives = 332/350 (94.86%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIVSPQQQPQIHRFPQFKYIDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LD+ P S W SPSR+SSLKTSQ ++NPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDMAPQSAWTSPSRISSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKI 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHD PISCVDVMD GGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDRPISCVDVMDSGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAV QFK +WASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFATGGCGFSLQWWDQRKPGGAVCQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLR QQQPIILSGLEGSKTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVRYDPYIKSGNIGGMSSSQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           GI+TSIEQGK+PVELLAEPCAINGFDI+ QHPSEVICNLEWESVAILSRP
Sbjct: 301 GIITSIEQGKQPVELLAEPCAINGFDIDHQHPSEVICNLEWESVAILSRP 350

[Close]
BLAST of CsaV3_2G007740 vs. TAIR10
Match: AT4G30840.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 401.0 bits (1029), Expect = 7.7e-112
Identity = 213/362 (58.84%), Postives = 251/362 (69.34%), Query Frame = 0 

Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---IVPHSTWISPSRVSSLKTSQL-----HRNPLVFASTYTGSLHVLSVEPMEASLDSEL 126
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ +E +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 127 SVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYN 186
              E +  H G +  VD  + GGEC+TV EDGRV++V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 187 AVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTC 246
           AVKWASPTEFVTGG GF LQ WDQRK G AVSQ K NW     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 247 LAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS 306
           +AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 307 TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILS 351
           ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDI+RQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 361

[Close]
BLAST of CsaV3_2G007740 vs. Swiss-Prot
Match: sp|Q24JJ9|NUP43_ARATH (Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-110
Identity = 213/362 (58.84%), Postives = 251/362 (69.34%), Query Frame = 0 

Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA +RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---IVPHSTWISPSRVSSLKTSQL-----HRNPLVFASTYTGSLHVLSVEPMEASLDSEL 126
              I   S+W SPSRVSSL+ +          P+V A+T +GSLHVL ++ +E +   E 
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLVEGAAIEEF 124

Query: 127 SVPE-KMLHDGPISCVDVMDGGGECLTVSEDGRVSLVS-VGESGLSYRRIFDSNGLVSYN 186
              E +  H G +  VD  + GGEC+TV EDGRV++V  V   GL YR++FD NGLV+Y 
Sbjct: 125 YAAEGERFHVGRVEGVDWRE-GGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVAYR 184

Query: 187 AVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKANW----ASGIVHCIDIHPSRKHTC 246
           AVKWASPTEFVTGG GF LQ WDQRK G AVSQ K NW     S IVH IDIHPSRKHTC
Sbjct: 185 AVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKHTC 244

Query: 247 LAGGSFGTVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS 306
           +AGGS GTVFAWDLR  QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Sbjct: 245 IAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NVSS 304

Query: 307 TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILS 351
           ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDI+RQ+P +VIC+LEWES+A+ S
Sbjct: 305 SRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAVFS 361

[Close]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match: tr|A0A0A0LJ46|A0A0A0LJ46_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036670 PE=4 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 1.7e-206
Identity = 350/350 (100.00%), Postives = 350/350 (100.00%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 350

[Close]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match: tr|A0A1S3BTA6|A0A1S3BTA6_CUCME (nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 5.3e-200
Identity = 337/349 (96.56%), Postives = 345/349 (98.85%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120
           LDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180
           LHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240
           EFVTGGCGFSLQWWDQRKPGGAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300
           DLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 350
           GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match: tr|M5XD93|M5XD93_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G102000 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.8e-139
Identity = 243/354 (68.64%), Postives = 288/354 (81.36%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI +  + PQIHR  Q KY+D VRWLPPLSA  R AVIA+FDSDSDS++IE HS   +P
Sbjct: 1   MAITALSEPPQIHRLRQSKYIDAVRWLPPLSALDRLAVIAVFDSDSDSAAIETHSFAPDP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPME-ASLDSELSVPEK 120
            ++   S W SPSR+SSLKTSQ H  P V A+T  GS+H+L  + M+ ASL+SEL +PEK
Sbjct: 61  ENLTQQSQWFSPSRISSLKTSQSHHKPFVAAATLAGSIHILFGDSMDPASLESELLMPEK 120

Query: 121 MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 180
            LH+GPISCVD+MDGG EC++V EDGRV+LVSVGES LSY+RIFDS+GLVS+   KWASP
Sbjct: 121 ALHEGPISCVDIMDGGVECVSVGEDGRVNLVSVGESELSYQRIFDSSGLVSFTTAKWASP 180

Query: 181 TEFVTGGCGFSLQWWDQRKPGGAVSQFKANWAS----GIVHCIDIHPSRKHTCLAGGSFG 240
           +EF TGG GFSLQWWDQRKPG AVSQFK +W+     GIVH IDIHPSRKHTCLAGGS G
Sbjct: 181 SEFATGGYGFSLQWWDQRKPGAAVSQFKGSWSQRTTPGIVHSIDIHPSRKHTCLAGGSLG 240

Query: 241 TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 300
           TVFAWDLR  QQPI+LSG+   +T++ SPCESEVWEVH+D Y KS N+G +SS +ILP M
Sbjct: 241 TVFAWDLRWPQQPILLSGVGAGETTH-SPCESEVWEVHFDHYAKSSNVGNVSS-RILPTM 300

Query: 301 ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSR 350
           ICSEDGIL  +EQG+EPVELLAEPCAIN FDI+RQ+PS+VIC+LEWES+AIL+R
Sbjct: 301 ICSEDGILAVVEQGEEPVELLAEPCAINSFDIDRQYPSDVICSLEWESIAILTR 352

[Close]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match: tr|A0A2P5FNF8|A0A2P5FNF8_9ROSA (Guanine nucleotide-binding protein, beta subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_048620 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 5.2e-139
Identity = 239/355 (67.32%), Postives = 284/355 (80.00%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI    + PQIHRFPQ KYVD VRWLPP +A  R+A +A FDSDSDSSS+EI+S+  NP
Sbjct: 1   MAITPHSESPQIHRFPQSKYVDAVRWLPPATALHRYAALAFFDSDSDSSSVEIYSIGSNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEA-SLDSELSVPEK 120
             ++P S+W+SPSRVSSLK S     P V   T++ SLHVL  +PM+A SL+SE+SVP K
Sbjct: 61  PTLIPQSSWVSPSRVSSLKASHSQHRPFVATGTFSSSLHVLFCDPMDASSLESEVSVPGK 120

Query: 121 MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 180
           +LH+GPISCVD+MDGG ECLTV EDG+++LV +G S L++RR+FDS+GLVSY A KW SP
Sbjct: 121 VLHEGPISCVDLMDGGLECLTVGEDGKINLVGIGVSNLNHRRVFDSSGLVSYTAAKWGSP 180

Query: 181 TEFVTGGCGFSLQWWDQRKPGGAVSQFKANWA----SGIVHCIDIHPSRKHTCLAGGSFG 240
            EF TGG GFSLQWWDQRKPGGAVSQFK +WA    SG+VH IDIHPSRKHTCLAGGS G
Sbjct: 181 AEFATGGYGFSLQWWDQRKPGGAVSQFKGDWAKRRTSGMVHSIDIHPSRKHTCLAGGSLG 240

Query: 241 TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 300
           +VFAWDLR  QQPIILSG+        SP ESEVWEV YD + KS N+G +SS++ILPAM
Sbjct: 241 SVFAWDLRWPQQPIILSGVGAGDGGVHSPSESEVWEVQYDRHAKSMNMGNISSSKILPAM 300

Query: 301 ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           ICSEDGIL  IEQG+E +EL AEPCAIN FDI+RQ+PS+VIC+LEWES+AIL+RP
Sbjct: 301 ICSEDGILAVIEQGEELLELAAEPCAINSFDIDRQNPSDVICSLEWESIAILTRP 355

[Close]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match: tr|A0A2P5DAU4|A0A2P5DAU4_PARAD (Guanine nucleotide-binding protein, beta subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080770 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 9.8e-138
Identity = 236/355 (66.48%), Postives = 283/355 (79.72%), Query Frame = 0 

Query: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60
           MAI +  + PQIHRFPQ KYVD VRWLPP +A  R+A +A FDSDSDSSS+EI+S+  NP
Sbjct: 1   MAITTHSEPPQIHRFPQSKYVDAVRWLPPATALHRYAALAFFDSDSDSSSVEIYSIGSNP 60

Query: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEA-SLDSELSVPEK 120
             ++P S+W+ PSRVSSLK S     P V A T++ SLHVL  + M+A SL+SE+ VP K
Sbjct: 61  ATLIPQSSWVCPSRVSSLKASHSQHRPFVAAGTFSSSLHVLFCDLMDASSLESEVLVPGK 120

Query: 121 MLHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASP 180
           ++H+GPISCVD+MDG  ECLTV EDG+++LV +G S L++RR+FDS+GL+SY A KW SP
Sbjct: 121 VIHEGPISCVDLMDGELECLTVGEDGKINLVGIGVSNLNHRRVFDSSGLISYTAAKWGSP 180

Query: 181 TEFVTGGCGFSLQWWDQRKPGGAVSQFKANWA----SGIVHCIDIHPSRKHTCLAGGSFG 240
            EF TGG GFSLQWWDQRKPGGAVSQFK +WA    SGIVH IDIHPSRKHTCLAGGS G
Sbjct: 181 AEFATGGYGFSLQWWDQRKPGGAVSQFKGDWAQRRTSGIVHSIDIHPSRKHTCLAGGSLG 240

Query: 241 TVFAWDLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAM 300
           +VFAWDLR  QQPIILSG+        SP ESEVWEV YD + KS N+G +SS++ILPAM
Sbjct: 241 SVFAWDLRWPQQPIILSGVGAGDIGVHSPSESEVWEVQYDRHAKSMNMGNISSSKILPAM 300

Query: 301 ICSEDGILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 351
           ICSEDGIL  IEQG+EP+EL AEPCAIN FDI+RQ+PS+VIC+LEWES+AIL+RP
Sbjct: 301 ICSEDGILAVIEQGEEPLELAAEPCAINSFDIDRQNPSDVICSLEWESIAILTRP 355

The following BLAST results are available for this feature:
BLAST of CsaV3_2G007740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144716.12.6e-206100.00PREDICTED: nuclear pore complex protein NUP43 [Cucumis sativus] >KGN61069.1 hypo... [more]
XP_008452472.18.0e-20096.56PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo][more]
XP_022937892.15.2e-19191.43nuclear pore complex protein NUP43 [Cucurbita moschata][more]
XP_023538014.14.4e-19091.14nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo][more]
XP_022969681.15.4e-18889.71nuclear pore complex protein NUP43 [Cucurbita maxima][more]
BLAST of CsaV3_2G007740 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30840.17.7e-11258.84Transducin/WD40 repeat-like superfamily protein[more]
BLAST of CsaV3_2G007740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q24JJ9|NUP43_ARATH1.4e-11058.84Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana OX=3702 GN=NUP43 PE=1... [more]
BLAST of CsaV3_2G007740 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LJ46|A0A0A0LJ46_CUCSA1.7e-206100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036670 PE=4 SV=1[more]
tr|A0A1S3BTA6|A0A1S3BTA6_CUCME5.3e-20096.56nuclear pore complex protein NUP43 OS=Cucumis melo OX=3656 GN=LOC103493491 PE=4 ... [more]
tr|M5XD93|M5XD93_PRUPE1.8e-13968.64Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G102000 PE=4 SV=1[more]
tr|A0A2P5FNF8|A0A2P5FNF8_9ROSA5.2e-13967.32Guanine nucleotide-binding protein, beta subunit OS=Trema orientalis OX=63057 GN... [more]
tr|A0A2P5DAU4|A0A2P5DAU4_PARAD9.8e-13866.48Guanine nucleotide-binding protein, beta subunit OS=Parasponia andersonii OX=347... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0031080nuclear pore outer ring
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR037628Nup43
IPR015943WD40/YVTN_repeat-like_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006261 DNA-dependent DNA replication
cellular_component GO:0031080 nuclear pore outer ring
cellular_component GO:0009507 chloroplast
cellular_component GO:0005635 nuclear envelope
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G007740.1CsaV3_2G007740.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 18..348
e-value: 1.5E-28
score: 102.2
IPR037628Nucleoporin Nup43PANTHERPTHR22652NUCLEOPORIN NUP43coord: 9..349
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 40..276

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G007740CSPI02G05380Wild cucumber (PI 183967)cpicucB080
CsaV3_2G007740Cucsa.089970Cucumber (Gy14) v1cgycucB097
CsaV3_2G007740CmaCh12G008380Cucurbita maxima (Rimu)cmacucB0205
CsaV3_2G007740CmoCh12G008430Cucurbita moschata (Rifu)cmocucB0187
CsaV3_2G007740Cp4.1LG07g06960Cucurbita pepo (Zucchini)cpecucB1017
CsaV3_2G007740CsGy2G005510Cucumber (Gy14) v2cgybcucB064
CsaV3_2G007740Carg16418Silver-seed gourdcarcucB0952
CsaV3_2G007740Cla020035Watermelon (97103) v1cucwmB159
CsaV3_2G007740MELO3C004111Melon (DHL92) v3.5.1cucmeB141
CsaV3_2G007740ClCG02G014260Watermelon (Charleston Gray)cucwcgB137
CsaV3_2G007740Lsi11G007030Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G007740MELO3C004111.2Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G007740Cla97C02G040030Watermelon (97103) v2cucwmbB123
CsaV3_2G007740Bhi06G001203Wax gourdcucwgoB145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G007740Cucumber (Chinese Long) v3cuccucB008
CsaV3_2G007740Silver-seed gourdcarcucB0148
CsaV3_2G007740Silver-seed gourdcarcucB0538
CsaV3_2G007740Silver-seed gourdcarcucB0598
CsaV3_2G007740Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G007740Cucumber (Gy14) v2cgybcucB017
CsaV3_2G007740Cucurbita maxima (Rimu)cmacucB0083
CsaV3_2G007740Cucurbita maxima (Rimu)cmacucB0136
CsaV3_2G007740Cucurbita moschata (Rifu)cmocucB0072
CsaV3_2G007740Cucurbita moschata (Rifu)cmocucB0122
CsaV3_2G007740Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G007740Cucurbita pepo (Zucchini)cpecucB0009
CsaV3_2G007740Cucurbita pepo (Zucchini)cpecucB0115
CsaV3_2G007740Cucurbita pepo (Zucchini)cpecucB0452
CsaV3_2G007740Cucurbita pepo (Zucchini)cpecucB0827
CsaV3_2G007740Wild cucumber (PI 183967)cpicucB020
CsaV3_2G007740Bottle gourd (USVL1VR-Ls)cuclsiB146
CsaV3_2G007740Melon (DHL92) v3.5.1cucmeB118
CsaV3_2G007740Melon (DHL92) v3.6.1cucmedB111
CsaV3_2G007740Watermelon (Charleston Gray)cucwcgB158
CsaV3_2G007740Watermelon (97103) v1cucwmB182
CsaV3_2G007740Watermelon (97103) v2cucwmbB145
CsaV3_2G007740Wax gourdcucwgoB221