Cp4.1LG07g06960 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g06960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	WD40 repeat-containing protein
Location	Cp4.1LG07 : 5823005 .. 5825951 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGGCCAGGACGGCGTCCCATAAAATTCACATTTTCAGTTGCCGTCGTCACTCTGATTCCCAGTCTTCCTGGAAAGTGAGACAACTGAGCTTGCTTAAACCCTAACAATGGCGATCGTGAGTCCCCAGCAGCAACCTCAAATCCACAGGTTTCCGCAATTCAAGTATGTTGACGGCGTTCGATGGCTTCCACCGCTCTCCGCATTCGGCCGGTTTGCCGTCGTTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCCTTACTCAAAACCCGCTGGATATGGCTCCTCAGTCGGCTTGGACGTCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAATTCTACCAAAACCCTCTCGTCTTCGCTTCGACTTATACGGGCTCTCTTCATGTTCTATCTGTCGAGCCAATGGATGCGTCGCTCGATTCGGAGCTCTCCGTGCCTGAGAAGGTATTGCACGATAGACCTATTTCTTGTGTCGATGTGATGGATGGTGGAGGTGAATGTCTGACCGTTGCGGAAGATGGACGGGTGAATTTGGTTAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTGCAGCGAAATGGGCATCCCCCACTGAGTTTGCGACAGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGGCGACTGGTATGTGAATTTGCGTAATTTTCCTGGCATCCTTTCATATATAGTTGAACGTTTAGCATCTAGGACTGGAACAGAATTGTAGGAAACACCCTGTTTTCTGAAACAAGAAGTGGCTTCTGAGACTGCCTTACTACACTACAGATGAACGTATGTAGTGTAGATTGATGAAAGAACAATCGGTTCCTCAAAATGTTCTCTGGTTTGACTATAAAAATTAGGAAATTAAATTTTGATATTGTGAAATCCTAAAAAGTGCAAGGCGCCGTAGTTGATTAATAGATGTGTTGAATTCATTCTTGTGGCAATTTTGCAGGGCTTCTGGTATTGTTCACTGCATGGACATCCATCCATCGCGAAAACACACTTGTTTGGTAAGCTCTGTTGCCTTAGATTCTTATCCTTACATCACACCTAAGTAGTCATAAAATCACGTGTGTTCGTATAAACTCCGCAGAAGATCAGGACTCCGAACTTGTGTTTCCTTTCCGAACATATATATATATTTTTTTTTTGTCCTAAAACTTTTTGAGAGATATCATGATTGGGTCGCCCAAGCCAGATCTAGGGTCTAATAATGAGGGTAGTATTTTATCACGGTGGAGTTTTCTTGCTCTCGCTATCGTTTGCCTCGGAGACATGGTCGAGAAGTACCATGCATGGTTGCTTCTGACTCCCTATGAGCCGTTTGACGACCTGAGTTTCTGTACTTTCTTCCGTTAAGTTTGGTTTATAGTGCTAAACATGCCTCTTAAGAATTCTCGACCTAACACTTTTAGTAGATTACTTGAGCAGAGTTATTGAGCTAATTAATTCAAAGACATATAGTTGTTATTTGTTATCTCTTGTGTGAGTTCAGGTCGATAGTGAAATTGATTTTCCAGCCTTAGAATCATCACATTATAGAAATTTTTAATGGTTCTTTTTTCTTGTTTAGGTTGATACCACTTCATGTTGTTCCATCTTTCTTATCTTGCCCTTATTTATGAGCTTCAGTATAAGTGTGCTTATTATTCCCCATGTTAGGCAGGAGGCTCTTTCGGAACTGTCTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATCATTCTCTCAGGTCTAGAAGGGAGCAAAACATCAAATTTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACATTGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATCTGCTCCGAGGATGGGATTATAACTAGTATTGAACAAGGTAGAAACTGGTGCTGTGACCATGTTTGATTGGTCGGGGCGAACCATCGTTTATCCAAAGTCTTTTTGTTGCTACATATCTAATATATAAGTAGTTTCCTTTTTCGTTCTGTTATCTAATGCCTGTTGGCTATTGTCTTATTTTCTGTTCCACATCCATAAAGTGGCTCAACTTTTCTATTTATGTGACTTGTAGGCAAGCAGCCTGTGGAACTGCTAGCAGAACCTTGTGCAATTAATGGTTTTGACATCGACCGTCAACGCCCATCGGTAAGTTGCCCATATAACTATTATATGAAAACTTATGTTGTATACTTTATTCACTGTGTTGTCCCTATCTCTAAAATAAGCGTCTTATCTAAAAGCTTTGAAAATAAATGGTGAGAGGGTTTAAGTGGTGGTTCTCGCTATGTTTAAGACTCTCTAAATATGCTATGCAGGAAGTGATATGTAATTTGGAATGGGAATCCGTGGCCATCCTCTCAAGACCTTGATTTTCAGAAGTCATTGTCTTTTCTAAATCGTTTGGTTCCGATCCACTATATCGATCCCTTTGACGATGTAAGGTTTTTTGTATCTATAGCTTTTTTACCTCTCGCAGAATGCATGCGATTTCTTAGTTTTAGGCTCATGTAAAATTTGAGGCTGTTGCTGGGTTTGGTTACACCACGTAATTTGAACTTAATTTTGAGATGGATTATCATATTGGTCTTGACCATATCAGGGTGATATGAATGATGTAACTTTGCATTGTCTTTTTAATGTATTTCTTCTGTTTTTCATTCTACTTCTCAACATGACGATTTTACCTTTTAATTTTTGTACCAATTAATGTTTACAGAATGTGAAGTACTTAGCTGAGCTTTATTGGAAATTTTTAATTGGCATTATTAGTTGTTGTGACTTAATTACAGGTTGGCAGACAGGTATTTTGTCTTGTAATTTTTTTA

mRNA sequence

TACGGCCAGGACGGCGTCCCATAAAATTCACATTTTCAGTTGCCGTCGTCACTCTGATTCCCAGTCTTCCTGGAAAGTGAGACAACTGAGCTTGCTTAAACCCTAACAATGGCGATCGTGAGTCCCCAGCAGCAACCTCAAATCCACAGGTTTCCGCAATTCAAGTATGTTGACGGCGTTCGATGGCTTCCACCGCTCTCCGCATTCGGCCGGTTTGCCGTCGTTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCCTTACTCAAAACCCGCTGGATATGGCTCCTCAGTCGGCTTGGACGTCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAATTCTACCAAAACCCTCTCGTCTTCGCTTCGACTTATACGGGCTCTCTTCATGTTCTATCTGTCGAGCCAATGGATGCGTCGCTCGATTCGGAGCTCTCCGTGCCTGAGAAGGTATTGCACGATAGACCTATTTCTTGTGTCGATGTGATGGATGGTGGAGGTGAATGTCTGACCGTTGCGGAAGATGGACGGGTGAATTTGGTTAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTGCAGCGAAATGGGCATCCCCCACTGAGTTTGCGACAGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATGGACATCCATCCATCGCGAAAACACACTTGTTTGGCAGGAGGCTCTTTCGGAACTGTCTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATCATTCTCTCAGGTCTAGAAGGGAGCAAAACATCAAATTTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACATTGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATCTGCTCCGAGGATGGGATTATAACTAGTATTGAACAAGGCAAGCAGCCTGTGGAACTGCTAGCAGAACCTTGTGCAATTAATGGTTTTGACATCGACCGTCAACGCCCATCGGAAGTGATATGTAATTTGGAATGGGAATCCGTGGCCATCCTCTCAAGACCTTGATTTTCAGAAGTCATTGTCTTTTCTAAATCGTTTGGTTCCGATCCACTATATCGATCCCTTTGACGATGTAAGGTTTTTTGTATCTATAGCTTTTTTACCTCTCGCAGAATGCATGCGATTTCTTAGTTTTAGGCTCATGTAAAATTTGAGGCTGTTGCTGGGTTTGGTTACACCACGTAATTTGAACTTAATTTTGAGATGGATTATCATATTGGTCTTGACCATATCAGGGTGATATGAATGATGTAACTTTGCATTGTCTTTTTAATGTATTTCTTCTGTTTTTCATTCTACTTCTCAACATGACGATTTTACCTTTTAATTTTTGTACCAATTAATGTTTACAGAATGTGAAGTACTTAGCTGAGCTTTATTGGAAATTTTTAATTGGCATTATTAGTTGTTGTGACTTAATTACAGGTTGGCAGACAGGTATTTTGTCTTGTAATTTTTTTA

Coding sequence (CDS)

ATGGCGATCGTGAGTCCCCAGCAGCAACCTCAAATCCACAGGTTTCCGCAATTCAAGTATGTTGACGGCGTTCGATGGCTTCCACCGCTCTCCGCATTCGGCCGGTTTGCCGTCGTTGCCCTTTTCGACTCTGATTCCGACTCATCCTCCATTGAAATTCACTCCCTTACTCAAAACCCGCTGGATATGGCTCCTCAGTCGGCTTGGACGTCACCTTCAAGAGTCTCTTCCCTTAAAACCTCTCAATTCTACCAAAACCCTCTCGTCTTCGCTTCGACTTATACGGGCTCTCTTCATGTTCTATCTGTCGAGCCAATGGATGCGTCGCTCGATTCGGAGCTCTCCGTGCCTGAGAAGGTATTGCACGATAGACCTATTTCTTGTGTCGATGTGATGGATGGTGGAGGTGAATGTCTGACCGTTGCGGAAGATGGACGGGTGAATTTGGTTAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTGCAGCGAAATGGGCATCCCCCACTGAGTTTGCGACAGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCAGTTTCTCAGTTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATGGACATCCATCCATCGCGAAAACACACTTGTTTGGCAGGAGGCTCTTTCGGAACTGTCTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATCATTCTCTCAGGTCTAGAAGGGAGCAAAACATCAAATTTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAACATTGGTGGCATGTCATCTTCGCAGATTTTACCTGCCATGATCTGCTCCGAGGATGGGATTATAACTAGTATTGAACAAGGCAAGCAGCCTGTGGAACTGCTAGCAGAACCTTGTGCAATTAATGGTTTTGACATCGACCGTCAACGCCCATCGGAAGTGATATGTAATTTGGAATGGGAATCCGTGGCCATCCTCTCAAGACCTTGA

Protein sequence

MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKVLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP

Homology

[Close]

BLAST of Cp4.1LG07g06960 vs. Swiss-Prot
Match: NUP43_ARATH (Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana GN=NUP43 PE=1 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.4e-110
Identity = 211/364 (57.97%), Postives = 250/364 (68.68%), Query Frame = 1


Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---MAPQSAWTSPSRVSSLKTS-------QFYQNPLVFASTYTGSLHVLSVEPMDASLDS 126
              +   S+WTSPSRVSSL+ +        F   P+V A+T +GSLHVL ++ ++ +   
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSF--KPMVSAATSSGSLHVLMIDLVEGAAIE 124

Query: 127 ELSVPE-KVLHDRPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVS 186
           E    E +  H   +  VD  +GG EC+TV EDGRVN+V  V   GL YR++FD NGLV+
Sbjct: 125 EFYAAEGERFHVGRVEGVDWREGG-ECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVA 184

Query: 187 YTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASG----IVHCMDIHPSRKH 246
           Y A KWASPTEF TGG GF LQ WDQRK G AVSQ KG+W  G    IVH +DIHPSRKH
Sbjct: 185 YRAVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKH 244

Query: 247 TCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGM 306
           TC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +
Sbjct: 245 TCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NV 304

Query: 307 SSSQILPAMICSEDGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAI 351
           SSS+ILP M CSEDGI+  IEQG++P+ELLAEPCAIN FDIDRQ P +VIC+LEWES+A+
Sbjct: 305 SSSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAV 361

[Close]

BLAST of Cp4.1LG07g06960 vs. TrEMBL
Match: A0A0A0LJ46_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036670 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 3.5e-190
Identity = 319/350 (91.14%), Postives = 335/350 (95.71%), Query Frame = 1


Query: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120
           LD+ P S W SPSRVSSLKTSQ ++NPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180
           LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK +WASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300
           DLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 351
           GI+TSIEQGK+PVELLAEPCAINGFDI+RQ PSEVICNLEWESVAILSRP
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of Cp4.1LG07g06960 vs. TrEMBL
Match: M5XD93_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007862mg PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 6.1e-142
Identity = 245/354 (69.21%), Postives = 291/354 (82.20%), Query Frame = 1


Query: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60
           MAI +  + PQIHR  Q KY+D VRWLPPLSA  R AV+A+FDSDSDS++IE HS   +P
Sbjct: 1   MAITALSEPPQIHRLRQSKYIDAVRWLPPLSALDRLAVIAVFDSDSDSAAIETHSFAPDP 60

Query: 61  LDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMD-ASLDSELSVPEK 120
            ++  QS W SPSR+SSLKTSQ +  P V A+T  GS+H+L  + MD ASL+SEL +PEK
Sbjct: 61  ENLTQQSQWFSPSRISSLKTSQSHHKPFVAAATLAGSIHILFGDSMDPASLESELLMPEK 120

Query: 121 VLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASP 180
            LH+ PISCVD+MDGG EC++V EDGRVNLVSVGES L+Y+RIFDS+GLVS+T AKWASP
Sbjct: 121 ALHEGPISCVDIMDGGVECVSVGEDGRVNLVSVGESELSYQRIFDSSGLVSFTTAKWASP 180

Query: 181 TEFATGGCGFSLQWWDQRKPGGAVSQFKGDWAS----GIVHCMDIHPSRKHTCLAGGSFG 240
           +EFATGG GFSLQWWDQRKPG AVSQFKG W+     GIVH +DIHPSRKHTCLAGGS G
Sbjct: 181 SEFATGGYGFSLQWWDQRKPGAAVSQFKGSWSQRTTPGIVHSIDIHPSRKHTCLAGGSLG 240

Query: 241 TVFAWDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAM 300
           TVFAWDLRW QQPI+LSG+   +T++ SPCESEVWEVH+D Y KS N+G + SS+ILP M
Sbjct: 241 TVFAWDLRWPQQPILLSGVGAGETTH-SPCESEVWEVHFDHYAKSSNVGNV-SSRILPTM 300

Query: 301 ICSEDGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSR 350
           ICSEDGI+  +EQG++PVELLAEPCAIN FDIDRQ PS+VIC+LEWES+AIL+R
Sbjct: 301 ICSEDGILAVVEQGEEPVELLAEPCAINSFDIDRQYPSDVICSLEWESIAILTR 352

[Close]

BLAST of Cp4.1LG07g06960 vs. TrEMBL
Match: I1JGT1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G206900 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 3.8e-136
Identity = 239/342 (69.88%), Postives = 274/342 (80.12%), Query Frame = 1


Query: 12  IHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQSAWTS 71
           I RFPQ +YVD VRWLP  SAF RFAV+ALFD DSD+SSIEIH+L QNP  + P S+W+S
Sbjct: 8   IQRFPQHRYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHALNQNPFSLEPHSSWSS 67

Query: 72  PSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKVLHDRPISCVDV 131
           PSRVSSLK S F Q PL+ AST +GSLH L  +  DASL SE+S+PE  LH  P SCVD+
Sbjct: 68  PSRVSSLKPSHFLQKPLIVASTSSGSLHFLFSDSSDASLLSEVSLPEGALHSLPASCVDL 127

Query: 132 MDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSL 191
           MDGG EC++V EDG+VNLV +G+S LNYRR+FDS GLVSYTA +WASP EFATGG GF L
Sbjct: 128 MDGGVECVSVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVRWASPMEFATGGFGFGL 187

Query: 192 QWWDQRKPGGAVSQFKGDW----ASGIVHCMDIHPSRKHTCLAGGSFGTVFAWDLRWQQQ 251
           QWWDQRKPGG VSQFKG+W     SGIVH +DIHPSRKHTCLAGGS GTVFAWDLRWQQQ
Sbjct: 188 QWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 247

Query: 252 PIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGIITSIE 311
           PIILSG   + T+  S  ESEVWEV YD  IKS      SS++ILP+MICSEDGI+  IE
Sbjct: 248 PIILSGAGAANTAVQSISESEVWEVQYDRCIKSNT----SSTRILPSMICSEDGILGVIE 307

Query: 312 QGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSR 350
           QG++P+ELLAEPCAIN FDIDR  PS+VIC+LEWE+VAIL+R
Sbjct: 308 QGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 345

[Close]

BLAST of Cp4.1LG07g06960 vs. TrEMBL
Match: A0A151S9K3_CAJCA (Nucleoporin Nup43 OS=Cajanus cajan GN=KK1_026732 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 3.6e-134
Identity = 239/341 (70.09%), Postives = 267/341 (78.30%), Query Frame = 1


Query: 13  HRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQSAWTSP 72
           HRFPQFKYVD VRWLP  S F RFAV+ALFDSD+DSSSI+IHS   NPL    Q +W SP
Sbjct: 7   HRFPQFKYVDAVRWLPLQSPFHRFAVLALFDSDTDSSSIQIHSFNPNPLSFDSQFSWPSP 66

Query: 73  SRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKVLHDRPISCVDVM 132
           SR+SSL+TS F Q PL+ AST +GSLH L  +P  A L SE S+P+  LH  P S VD+M
Sbjct: 67  SRISSLRTSHFLQKPLIVASTSSGSLHFLFADPSHAELLSEASLPDAALHSLPASSVDLM 126

Query: 133 DGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSLQ 192
           D   EC+TV EDGRVNLV+VGES L+YRRIFDS GLVSYTA +WASP EFATGG GFSLQ
Sbjct: 127 DAAVECVTVGEDGRVNLVNVGESNLSYRRIFDSGGLVSYTAVRWASPMEFATGGYGFSLQ 186

Query: 193 WWDQRKPGGAVSQFKGDW----ASGIVHCMDIHPSRKHTCLAGGSFGTVFAWDLRWQQQP 252
           WWDQRKPGG VSQFKGDW     SGIVH +DIHPSRKHTCLAGGS GTVFAWDLRWQQQP
Sbjct: 187 WWDQRKPGGPVSQFKGDWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQP 246

Query: 253 IILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGIITSIEQ 312
           IILSG      +  S  ESEVWEV YD  IKS      SS++ILP+MICSEDGI+  IEQ
Sbjct: 247 IILSGAGAGNAAVQSISESEVWEVQYDCCIKSNT----SSTRILPSMICSEDGILGVIEQ 306

Query: 313 GKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSR 350
           G++PVELLAEPCAIN FDIDR  PS+VIC+LEWE+VAIL+R
Sbjct: 307 GEEPVELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 343

[Close]

BLAST of Cp4.1LG07g06960 vs. TrEMBL
Match: I1MSZ4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_17G071100 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 6.1e-134
Identity = 238/345 (68.99%), Postives = 271/345 (78.55%), Query Frame = 1


Query: 12  IHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQSAWTS 71
           I RFPQ KYVD VRWLP  SAF RFAV+ALFD DSD+SSIEIHSL  NPL + P S+W+S
Sbjct: 6   IQRFPQHKYVDAVRWLPLQSAFDRFAVLALFDFDSDASSIEIHSLNPNPLSLEPHSSWSS 65

Query: 72  PSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKVLHDRPISCVDV 131
           PSRVSSLK S F Q PL+ AST +GSLH L  +   A+L+SE+S+PE  LH  P SCVD+
Sbjct: 66  PSRVSSLKASHFLQKPLIVASTSSGSLHFLFSDSSVATLESEVSIPEGALHSVPASCVDL 125

Query: 132 MDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGGCGFSL 191
           +DGG EC+TV EDG+VNLV +G+S LNYRR+FDS GLVSYTA  WASP EFATGG GF L
Sbjct: 126 LDGGVECVTVGEDGKVNLVGIGDSNLNYRRLFDSAGLVSYTAVSWASPMEFATGGYGFGL 185

Query: 192 QWWDQRKPGGAVSQFKGDW----ASGIVHCMDIHPSRKHTCLAGGSFGTVFAWDLRWQQQ 251
            WWDQRKPGG VSQFKG+W     SGIVH +DIHPSRKHTCLAGGS GTVFAWDLRWQQQ
Sbjct: 186 HWWDQRKPGGPVSQFKGNWDKKLTSGIVHSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQ 245

Query: 252 PIILSGL---EGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGIIT 311
           PIILSG     G  T+  S  ESEVWEV YD  IK       SS++ILP+MICSEDGI+ 
Sbjct: 246 PIILSGAGAGAGGNTAVQSISESEVWEVQYDRCIKPNT----SSTRILPSMICSEDGILG 305

Query: 312 SIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSR 350
            IEQG++P+ELLAEPCAIN FDIDR  PS+VIC+LEWE+VAIL+R
Sbjct: 306 VIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVAILTR 346

[Close]

BLAST of Cp4.1LG07g06960 vs. TAIR10
Match: AT4G30840.1 (AT4G30840.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 401.0 bits (1029), Expect = 7.6e-112
Identity = 211/364 (57.97%), Postives = 250/364 (68.68%), Query Frame = 1


Query: 7   QQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLD---- 66
           Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP      
Sbjct: 5   QDSFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLDPNPRGNHNT 64

Query: 67  ---MAPQSAWTSPSRVSSLKTS-------QFYQNPLVFASTYTGSLHVLSVEPMDASLDS 126
              +   S+WTSPSRVSSL+ +        F   P+V A+T +GSLHVL ++ ++ +   
Sbjct: 65  NPLIESLSSWTSPSRVSSLEVAGNGGGGGSF--KPMVSAATSSGSLHVLMIDLVEGAAIE 124

Query: 127 ELSVPE-KVLHDRPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVS 186
           E    E +  H   +  VD  +GG EC+TV EDGRVN+V  V   GL YR++FD NGLV+
Sbjct: 125 EFYAAEGERFHVGRVEGVDWREGG-ECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVA 184

Query: 187 YTAAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASG----IVHCMDIHPSRKH 246
           Y A KWASPTEF TGG GF LQ WDQRK G AVSQ KG+W  G    IVH +DIHPSRKH
Sbjct: 185 YRAVKWASPTEFVTGGYGFGLQLWDQRKSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRKH 244

Query: 247 TCLAGGSFGTVFAWDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGM 306
           TC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +
Sbjct: 245 TCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTKS----NV 304

Query: 307 SSSQILPAMICSEDGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAI 351
           SSS+ILP M CSEDGI+  IEQG++P+ELLAEPCAIN FDIDRQ P +VIC+LEWES+A+
Sbjct: 305 SSSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAV 361

[Close]

BLAST of Cp4.1LG07g06960 vs. NCBI nr
Match: gi|659069929|ref|XP_008452472.1| (PREDICTED: nucleoporin Nup43 [Cucumis melo])

HSP 1 Score: 674.5 bits (1739), Expect = 1.0e-190
Identity = 321/349 (91.98%), Postives = 334/349 (95.70%), Query Frame = 1


Query: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60
           MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNP
Sbjct: 1   MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNP 60

Query: 61  LDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120
           LD+AP S W SPSRVSSLKTSQ +QNPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180
           LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK DWASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300
           DLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSR 350
           GI+TSIEQGK+PVELLAEPCAINGFDIDRQ PSEVICNLEWESVAILSR
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR 349

[Close]

BLAST of Cp4.1LG07g06960 vs. NCBI nr
Match: gi|449453944|ref|XP_004144716.1| (PREDICTED: nuclear pore complex protein NUP43 [Cucumis sativus])

HSP 1 Score: 672.2 bits (1733), Expect = 5.0e-190
Identity = 319/350 (91.14%), Postives = 335/350 (95.71%), Query Frame = 1


Query: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNP 60
           MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSDSDSSSIEIHSLTQNP
Sbjct: 1   MAIASPQQQPQIHRFPQFKYVDGVRWLPPLSAFSRFAVIALFDSDSDSSSIEIHSLTQNP 60

Query: 61  LDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMDASLDSELSVPEKV 120
           LD+ P S W SPSRVSSLKTSQ ++NPLVFASTYTGSLHVLSVEPM+ASLDSELSVPEK+
Sbjct: 61  LDIVPHSTWISPSRVSSLKTSQLHRNPLVFASTYTGSLHVLSVEPMEASLDSELSVPEKM 120

Query: 121 LHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPT 180
           LHD PISCVDVMDGGGECLTV+EDGRV+LVSVGESGL+YRRIFDSNGLVSY A KWASPT
Sbjct: 121 LHDGPISCVDVMDGGGECLTVSEDGRVSLVSVGESGLSYRRIFDSNGLVSYNAVKWASPT 180

Query: 181 EFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCMDIHPSRKHTCLAGGSFGTVFAW 240
           EF TGGCGFSLQWWDQRKPGGAVSQFK +WASGIVHC+DIHPSRKHTCLAGGSFGTVFAW
Sbjct: 181 EFVTGGCGFSLQWWDQRKPGGAVSQFKANWASGIVHCIDIHPSRKHTCLAGGSFGTVFAW 240

Query: 241 DLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSED 300
           DLR QQQPIILSGLEGSKTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Sbjct: 241 DLRSQQQPIILSGLEGSKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED 300

Query: 301 GIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 351
           GI+TSIEQGK+PVELLAEPCAINGFDI+RQ PSEVICNLEWESVAILSRP
Sbjct: 301 GILTSIEQGKEPVELLAEPCAINGFDINRQHPSEVICNLEWESVAILSRP 350

[Close]

BLAST of Cp4.1LG07g06960 vs. NCBI nr
Match: gi|694323444|ref|XP_009352790.1| (PREDICTED: uncharacterized protein LOC103944108 [Pyrus x bretschneideri])

HSP 1 Score: 524.2 bits (1349), Expect = 1.7e-145
Identity = 250/348 (71.84%), Postives = 291/348 (83.62%), Query Frame = 1


Query: 8   QQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQS 67
           + PQIHR PQ KY+D VRWLPPLSA  R AV+A+FDSDSDSSS+E HS T NP  + PQS
Sbjct: 5   EPPQIHRLPQSKYLDSVRWLPPLSALDRLAVIAVFDSDSDSSSVETHSFTPNPATLTPQS 64

Query: 68  AWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMD-ASLDSELSVPEKVLHDRPI 127
            W SPSR+SSLKTSQ +  PLV A+T++GSLH+L  + MD A L SELSVPEK LH+ PI
Sbjct: 65  QWVSPSRISSLKTSQSHHKPLVAAATFSGSLHILYGDSMDPAYLQSELSVPEKELHEGPI 124

Query: 128 SCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGG 187
           SCVDVMDGG EC++V EDGRVNLVS+G+S L+YRR+FDS+GLVS+TAAKWASP+EFATGG
Sbjct: 125 SCVDVMDGGSECVSVGEDGRVNLVSLGDSELSYRRVFDSSGLVSFTAAKWASPSEFATGG 184

Query: 188 CGFSLQWWDQRKPGGAVSQFKGDWAS----GIVHCMDIHPSRKHTCLAGGSFGTVFAWDL 247
            GFSLQWWDQRK GGAVSQFKG W+     GIVH +DIHPSRKHTCLAGGS GTVFAWDL
Sbjct: 185 YGFSLQWWDQRKRGGAVSQFKGGWSQPSTPGIVHSIDIHPSRKHTCLAGGSLGTVFAWDL 244

Query: 248 RWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGI 307
           RW QQPI+LSG+ G+  +  SPCESEVWEV YD Y KS N+G + SS+ILP MICSEDGI
Sbjct: 245 RWPQQPILLSGV-GAGEATHSPCESEVWEVQYDHYAKSSNVGNV-SSRILPTMICSEDGI 304

Query: 308 ITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 351
           +  +EQG++P+ELLAEPCAIN FDIDRQ PS+VIC+LEWES+AIL+RP
Sbjct: 305 LAVVEQGEEPIELLAEPCAINSFDIDRQYPSDVICSLEWESIAILTRP 350

[Close]

BLAST of Cp4.1LG07g06960 vs. NCBI nr
Match: gi|1009109732|ref|XP_015891792.1| (PREDICTED: nuclear pore complex protein NUP43 [Ziziphus jujuba])

HSP 1 Score: 518.5 bits (1334), Expect = 9.3e-144
Identity = 250/357 (70.03%), Postives = 293/357 (82.07%), Query Frame = 1


Query: 1   MAIVSPQQQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSS--IEIHSLTQ 60
           MA+ +  + PQ+HRFPQ KYVD VRWLPP+    RFAVVA FD+DSDS    IEI SL+ 
Sbjct: 1   MAVTALSESPQVHRFPQSKYVDAVRWLPPVLPLKRFAVVAFFDTDSDSDPYFIEIQSLSS 60

Query: 61  NPLDMAPQSAWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMD-ASLDSELSVP 120
           NPL++   S+W SPSR+SSLKTSQ +  PLV A T+ GSLHVLS   +D ASL+  LSVP
Sbjct: 61  NPLNLNSHSSWVSPSRISSLKTSQSHYVPLVVAGTFAGSLHVLSAGSVDRASLEPVLSVP 120

Query: 121 EKVLHDRPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWA 180
           EKV+H+ P+SC+D+MDGG EC+ V EDGRVNLVS+G+S LN+RR+FDS+GLVSYTAAKW 
Sbjct: 121 EKVMHNGPVSCLDLMDGGVECVIVGEDGRVNLVSIGDSRLNHRRVFDSSGLVSYTAAKWG 180

Query: 181 SPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWA----SGIVHCMDIHPSRKHTCLAGGS 240
           S TEFATGG GFSLQWWDQRKP GAVSQFKG WA    SGIVH +DIHPSRKHTCLAGGS
Sbjct: 181 SSTEFATGGYGFSLQWWDQRKPDGAVSQFKGSWAQRKTSGIVHSIDIHPSRKHTCLAGGS 240

Query: 241 FGTVFAWDLRWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILP 300
            GTVFAWDLRW QQPI+LSGL G+  +  SP ESEVWEV YD + KS N+G +SSS+ILP
Sbjct: 241 LGTVFAWDLRWPQQPIVLSGL-GAGNTEHSPSESEVWEVQYDRFAKSSNVGNISSSRILP 300

Query: 301 AMICSEDGIITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 351
           AMICSEDGI++ +EQG++P+ELLAEPCAIN FDIDRQ PS+VIC+LEWESVAIL+RP
Sbjct: 301 AMICSEDGILSVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESVAILTRP 356

[Close]

BLAST of Cp4.1LG07g06960 vs. NCBI nr
Match: gi|658027562|ref|XP_008349208.1| (PREDICTED: uncharacterized protein LOC103412422 [Malus domestica])

HSP 1 Score: 517.7 bits (1332), Expect = 1.6e-143
Identity = 247/348 (70.98%), Postives = 287/348 (82.47%), Query Frame = 1


Query: 8   QQPQIHRFPQFKYVDGVRWLPPLSAFGRFAVVALFDSDSDSSSIEIHSLTQNPLDMAPQS 67
           + PQIHR PQ KY+D VRWLPPLSA  R AV+A+FDSDSDSSS+E HS T N   + PQS
Sbjct: 5   EPPQIHRLPQSKYIDSVRWLPPLSALDRLAVIAVFDSDSDSSSVETHSFTPNSATLTPQS 64

Query: 68  AWTSPSRVSSLKTSQFYQNPLVFASTYTGSLHVLSVEPMD-ASLDSELSVPEKVLHDRPI 127
            W SPSR+SSLKTSQ +  PLV A+T++GSLH+L  + MD A L SELSVPEK  H+ PI
Sbjct: 65  QWVSPSRISSLKTSQSHHKPLVAAATFSGSLHILYGDSMDPAYLQSELSVPEKESHEGPI 124

Query: 128 SCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTAAKWASPTEFATGG 187
           SCVDVMDGG EC++V EDGRVNLVS+G+S L+YRR+FDS GLVS+TAAKWASP+EFATGG
Sbjct: 125 SCVDVMDGGSECVSVGEDGRVNLVSLGDSELSYRRVFDSGGLVSFTAAKWASPSEFATGG 184

Query: 188 CGFSLQWWDQRKPGGAVSQFKGDWAS----GIVHCMDIHPSRKHTCLAGGSFGTVFAWDL 247
            GFSLQWWDQRK GGAVSQFKG W+     GIVH +DIHPSRKHTCLAGGS GTVFAWDL
Sbjct: 185 YGFSLQWWDQRKHGGAVSQFKGGWSQPSTPGIVHSIDIHPSRKHTCLAGGSLGTVFAWDL 244

Query: 248 RWQQQPIILSGLEGSKTSNFSPCESEVWEVHYDPYIKSGNIGGMSSSQILPAMICSEDGI 307
           RW QQPI+LSG+ G+  +  SPCESEVWEV YD Y KS N+G + SS+ILP MICSEDGI
Sbjct: 245 RWPQQPILLSGV-GAGEATHSPCESEVWEVQYDHYAKSSNVGNV-SSRILPTMICSEDGI 304

Query: 308 ITSIEQGKQPVELLAEPCAINGFDIDRQRPSEVICNLEWESVAILSRP 351
           +  +EQG++P+ELLAEPCAIN FDIDRQ PS+VIC+LEWES+ IL+RP
Sbjct: 305 LAVVEQGEEPIELLAEPCAINSFDIDRQYPSDVICSLEWESIVILTRP 350

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g06960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NUP43_ARATH	1.4e-110	57.97	Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana GN=NUP43 PE=1 SV=1	[more]

BLAST of Cp4.1LG07g06960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ46_CUCSA	3.5e-190	91.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036670 PE=4 SV=1	[more]
M5XD93_PRUPE	6.1e-142	69.21	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007862mg PE=4 SV=1	[more]
I1JGT1_SOYBN	3.8e-136	69.88	Uncharacterized protein OS=Glycine max GN=GLYMA_02G206900 PE=4 SV=1	[more]
A0A151S9K3_CAJCA	3.6e-134	70.09	Nucleoporin Nup43 OS=Cajanus cajan GN=KK1_026732 PE=4 SV=1	[more]
I1MSZ4_SOYBN	6.1e-134	68.99	Uncharacterized protein OS=Glycine max GN=GLYMA_17G071100 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g06960 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30840.1	7.6e-112	57.97	Transducin/WD40 repeat-like superfamily protein	[more]

BLAST of Cp4.1LG07g06960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069929\|ref\|XP_008452472.1\|	1.0e-190	91.98	PREDICTED: nucleoporin Nup43 [Cucumis melo]	[more]
gi\|449453944\|ref\|XP_004144716.1\|	5.0e-190	91.14	PREDICTED: nuclear pore complex protein NUP43 [Cucumis sativus]	[more]
gi\|694323444\|ref\|XP_009352790.1\|	1.7e-145	71.84	PREDICTED: uncharacterized protein LOC103944108 [Pyrus x bretschneideri]	[more]
gi\|1009109732\|ref\|XP_015891792.1\|	9.3e-144	70.03	PREDICTED: nuclear pore complex protein NUP43 [Ziziphus jujuba]	[more]
gi\|658027562\|ref\|XP_008349208.1\|	1.6e-143	70.98	PREDICTED: uncharacterized protein LOC103412422 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0031080	nuclear pore outer ring
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g06960.1	Cp4.1LG07g06960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 71..276 score: 7.0
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 16..281 score: 3.46
None	No IPR available	PANTHER	PTHR22652	NUCLEOPORIN NUP43	coord: 7..349 score: 1.8E
None	No IPR available	PANTHER	PTHR22652:SF0	NUCLEOPORIN NUP43	coord: 7..349 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g06960	Cucsa.089970	Cucumber (Gy14) v1	cgycpeB0178
Cp4.1LG07g06960	CmaCh12G008380	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g06960	CmoCh12G008430	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g06960	Cla020035	Watermelon (97103) v1	cpewmB807
Cp4.1LG07g06960	Csa2G036670	Cucumber (Chinese Long) v2	cpecuB823
Cp4.1LG07g06960	MELO3C004111	Melon (DHL92) v3.5.1	cpemeB773
Cp4.1LG07g06960	ClCG02G014260	Watermelon (Charleston Gray)	cpewcgB734
Cp4.1LG07g06960	CSPI02G05380	Wild cucumber (PI 183967)	cpecpiB824
Cp4.1LG07g06960	Lsi11G007030	Bottle gourd (USVL1VR-Ls)	cpelsiB661
Cp4.1LG07g06960	MELO3C004111.2	Melon (DHL92) v3.6.1	cpemedB909
Cp4.1LG07g06960	CsaV3_2G007740	Cucumber (Chinese Long) v3	cpecucB1017
Cp4.1LG07g06960	CsGy2G005510	Cucumber (Gy14) v2	cgybcpeB274
Cp4.1LG07g06960	Carg16418	Silver-seed gourd	carcpeB1263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g06960	Wax gourd	cpewgoB1007
Cp4.1LG07g06960	Cucurbita pepo (Zucchini)	cpecpeB143
Cp4.1LG07g06960	Cucurbita maxima (Rimu)	cmacpeB795
Cp4.1LG07g06960	Cucurbita moschata (Rifu)	cmocpeB748
Cp4.1LG07g06960	Melon (DHL92) v3.5.1	cpemeB752
Cp4.1LG07g06960	Silver-seed gourd	carcpeB0806