CsaV3_2G007600 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G007600
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionF-box protein SKIP1
Locationchr2 : 3890528 .. 3893910 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTCATATACTTTTAAAATGTTTATTTCGGTTCCCATCAAAAGAGATGTTAGTACGAATATTCTTTTTCTTTTTAAGAATTGAGTTGACAATTACTCTTAGATCGAGTAATTTGAATAATTTACACAAAAATAACCGATGATAAATATGAATAATTGAATTGTAATAAAAGAAAAAATTGTAGAAAATATCCTGAAACTATGAGTTTGGTTACATTCACGTTTCTAAACTTTTAATTTGATCCGATCCCTAAAGGTTGTTAATTTTTTATTTATTGAATATCTGTATTTTTCTCTCTTTTCTCTAGTACCTCTCTTCAATTCACGATAAATTGAAGTATGGGTACAAGTACAACAAGAAGGTGGAGATATTGAGGTTGACAGGGTGGGTCCTCACTACTTTCAAATTCTCAAAAGTTCCTAATTCTCCTTTTTCAAATTCTCAACATATTGGGGTTTCACTCTTTTCTTCTCTAGTCTTTCTCTATGTTCTGTTTCTGTTTTATGATTTTCATTCCCTTTTTTGCGTTCGACATAGATATGTTTTCTGCTGCTTTTCTTCCCAGTCCTCCTTCCCACTCATACATATATACCTTTTCATAAATTGAAAATGAAGTCATATAGTTCGCTTCTCCTCGTAATGTTGTGCGGTTTCTTTCTTGTTTTTTTTGCAATTGAGAATGGAAGAGCATATGTCCTCTAGCTCCAATGAGTGGGTAATTTGTATGTAGAATTGAAGAATAATTGAAAAGGATTGAGAATTCAAATGGGGAATCGAAGAAAAATGTCTATGATTGATGATTTCAATTGCAACCTGACGAGAGAGATTAGAAAGATATATGAGGGGTTTGGTTATAGTTATTTTGGAGAGTTGAGTGGGTAGTTATTCTAAGAGAGAATAATTAGGAAAGTTGATTAAAATAACGAGGTGAAAAATACAAATTGAGAAATGCGAGATAATAGGAATAACACCATCCACGTAGTTGAAAATGGTTTTTGCAACTTTTTCGATTAAGAAAAGGGTCGGTTGAGACTATCTCCATTCTCACGCCAAATGATCGGATTGCGCTTTTGCTTCTACTCCGCGCATCTCAACGAAAACTCCAAACGAAAAGAAAAATAAAAACCTCTATTTCCTTTCTTCATTCCTAAATTTATTTCCAAGGTCACCCAAAAAATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCCCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCTTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGGTAATTAAATTAACTTTTCTTCTTTTAATACTAATTTTAATTTTATTGTTGGGGCCAAAAATGGAGCTTTATTGTTTGGTTATTAGGGTAGAAGATTTCATTTTTATTCTTCTCATATTTTTTTTTATTCAGCAAGCATCTTGATTGTGAGTTTTTTGTTTTCATTTTATAATTAAGTTAAGCATTATCACTTGATTTTTGCATCTGCTTTCAATTTTCAACAATCGATGTGCAGTTTTTTAGAATTAAAATTGTTGGGTTCCTCATTCAAGATGGGTTTTTTTAGGATGGTGGATGGGATGGGATGGGATGGGATGGGATGAATTTAGAAATTCTAATTGGTTAGGGATGTACCTTATAGAAAGGATTCCTTGTTTTGGAAACATGGTTTTTTTTTTTCAATTCATAAATATTTCATGGAATTTGATGTTCTCATAAATAGTCCACTTAGGGACTACGAGGATCTTTCTCAAACAATAGGGAATGAATTCTAATAGTAAACCATATGAACTCAATTTGAACTTTTTCCATATCGTATGGATAGTTTAATTGCAAAAAAAAGCAATTTCTAAAGATTGTTTGGATTGATTTTTTAAGTGCTTAGGAGTGTTTTTCAAGAGAGAAAAAATAGTGTTTTTACAAGTCCATACAGAGTTTTGACTCTAAATAGTCGATGAGGTCATGAGTATGGGCTTTGCAACAAAAATGGCTGTAGAATCTGGCATTGGAGATGAGTAAGATAGCATGGACACTAGGGATTATCAAAAGGGAAAAGGAAATCATATTATGGGTTGGCATATATTGATGGCTTTCAACTTACTTCACATTTTAGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGATGATTCTGCAAGTGCACTTTTAATACTATATGTATAGCTGCACTTAGAAACCAAGTTTAATGTTGCTTTCCTAAGTTGTACAGTTTTTAATTTACCTGTTCTGTTTTATGACAGTTACAAGTCTGTATTATATTTGTAACTTGTATGGTGGACTGATGTGGCACAAGGTTGGTACTCTTGTAGTTATTGTTATGGGTTTCAGGTTTCACCCTGTACATCTCTAATCTCTTAATATGCTAATGATGGGACAATTCACATGATATTACAACATTTAGAAAATTAATTTCTAAATATGTAGTCACCAGGGATCGCCCATCACTTCTTAGTTATTGAGACCGTCTCCTTTTCTACCACTATTTTTCTATATTTTCTTCCTCTAAAATTCCGATCCCTCCATCAATATAACTAGTCCAAATATCTGACTTAAAAAGCTCTGGTTTAGATGCATTTTAAGTTTTATACCTTATACCTACCA

mRNA sequence

ATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCCCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCTTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGA

Coding sequence (CDS)

ATGGCGGAGCCGTCACCATGGGCGGAGCTGACTCACGAGTGTCTAACCAACATCCTCTCCCGTCTAACCATGGAGCAGCGGTGGCGCGGCCCTATGCTCGTTTGCAAACACTGGTTCCGTGCCGCCACGGATCCTTCTCTTTTTTCACACTTCGATCTCGAAAAAAGGTTCGAGTCTGCCCCCACCGAGCTTCCGGCCTGGTGGTTGCCGGAGTTCGAGACCAAAATTGATTCCATGCTCCGATCTGCCGTCCGTTGGAGCCTTGGATCTCTTTCAGTTATTCGGATTAGACACTGCTCCGATTCTTCTCTCGATTTAGTCGCTCAAGGATGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCGCCAATGTTACTGATAGATCAATGGCTAAGATTGCTTTTGGCTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCAAACGTGTCTTTGGCATTAATCGGCAGGCATTGTCCAAATATCAAGACTCTAAAACGAAACTTTTTTAACAATCTAGATCCTTCCCAACATAAGGGAATTGTCCCTGACAATTATCTAGATGCCCGCCCACAAGATGTGGATTCAGAAGCTGCCGCTATTGCAAAATTCATGCACAACTTGGAGTACCTTGAACTCGGTTTCTCTAAACTATCAGCTAAAGCTCTAACTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACCAGCCGAGATATAATGAATGCTACATCAAGTTTGGAGCATTTGGAGATTAGGAAACCAAATTTCTACATTCCAAGGTCGGTCTTTCACACGGAGAGGTATGATCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCCGAATTTGA

Protein sequence

MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVLSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Homology
[Close]
BLAST of CsaV3_2G007600 vs. NCBI nr
Match: XP_004144728.1 (PREDICTED: F-box protein SKIP1-like [Cucumis sativus] >KGN61056.1 hypothetical protein Csa_2G036050 [Cucumis sativus])

HSP 1 Score: 496.1 bits (1276), Expect = 8.2e-137
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA
Sbjct: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60

Query: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120
           PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX
Sbjct: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL
Sbjct: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 299

[Close]
BLAST of CsaV3_2G007600 vs. NCBI nr
Match: XP_008452697.1 (PREDICTED: F-box protein SKIP1 [Cucumis melo])

HSP 1 Score: 451.4 bits (1160), Expect = 2.3e-123
Identity = 282/303 (93.07%), Postives = 286/303 (94.39%), Query Frame = 0 

Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNN 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     N
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]
BLAST of CsaV3_2G007600 vs. NCBI nr
Match: XP_022946543.1 (F-box protein SKIP1-like [Cucurbita moschata])

HSP 1 Score: 421.4 bits (1082), Expect = 2.6e-114
Identity = 266/299 (88.96%), Postives = 279/299 (93.31%), Query Frame = 0 

Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPS WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE RF+S 
Sbjct: 1   MAEPS-WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDST 60

Query: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120
           PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCSDSSL LVAQGCPNLEVXXXX
Sbjct: 61  PTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNFFN LDPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFFNTLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           Q KGIVPD+YL+A PQDVDSEA AIAKFM NLE+L+L FSKLSAKALTLIC+GCPNLKYL
Sbjct: 181 QQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI+NATS+LE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]
BLAST of CsaV3_2G007600 vs. NCBI nr
Match: XP_023545430.1 (F-box protein SKIP1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420.6 bits (1080), Expect = 4.4e-114
Identity = 267/299 (89.30%), Postives = 277/299 (92.64%), Query Frame = 0 

Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPS WAELT ECLTNI SRLT EQRWRGPMLVCK W RAATD SLFSHF+LE RF+S 
Sbjct: 1   MAEPS-WAELTQECLTNIFSRLTTEQRWRGPMLVCKLWLRAATDSSLFSHFNLEPRFDST 60

Query: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120
           PTE PAWW P+FE KIDSMLRSAV+WSLGSLS+IRIRHCSDSSL LVAQGCPNLEVXXXX
Sbjct: 61  PTESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNFFN LDPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFFNTLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           Q KGIVPD+YL A PQDVDSEA AIAKFM NLE+LEL FSKLSAKALTLIC+GCPNLKYL
Sbjct: 181 QQKGIVPDSYLSACPQDVDSEAVAIAKFMPNLEHLELCFSKLSAKALTLICKGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI+NATSSLE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]
BLAST of CsaV3_2G007600 vs. NCBI nr
Match: XP_022999743.1 (F-box protein SKIP1-like [Cucurbita maxima])

HSP 1 Score: 420.2 bits (1079), Expect = 5.7e-114
Identity = 266/299 (88.96%), Postives = 279/299 (93.31%), Query Frame = 0 

Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAE S WAELT ECLTNI SRLT+EQRWRGPMLVCK W RAATD SLFSHFDL+ RF+S 
Sbjct: 1   MAEAS-WAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDST 60

Query: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120
           PTE PAWW P+FETKIDSMLRSAV+WSLGSLS+IRIRHCSDSSL LVAQGCPNLEVXXXX
Sbjct: 61  PTESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNFFN LDPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFFNTLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           Q KGIVPD+YL+A PQDVDSEA AIAKFM NLE+LEL FSK+SAKALTLIC+GCPNLKYL
Sbjct: 181 QQKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDI+NATSSLE+LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]
BLAST of CsaV3_2G007600 vs. TAIR10
Match: AT5G57900.1 (SKP1 interacting partner 1)

HSP 1 Score: 242.7 bits (618), Expect = 3.0e-64
Identity = 138/298 (46.31%), Postives = 164/298 (55.03%), Query Frame = 0 

Query: 5   SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEL 64
           S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E 
Sbjct: 6   SDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ES 65

Query: 65  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXX 124
              W PEFE K+D MLRS V WS G L+ IR+RHCSD +L   A  CPNL+V        
Sbjct: 66  THLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPN 125

Query: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKG 184
                                                         RN  +    S+H G
Sbjct: 126 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIG 185

Query: 185 IVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFG 244
            VP  YLDA PQD D+EA AI K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFG
Sbjct: 186 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 245

Query: 245 CVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 300
           CV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 246 CVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]
BLAST of CsaV3_2G007600 vs. TAIR10
Match: AT4G30640.1 (RNI-like superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-50
Identity = 157/276 (56.88%), Postives = 190/276 (68.84%), Query Frame = 0 

Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPA 66
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P  +  
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFPESI-N 79

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXXXX 126
           WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL   A+ CPNLEV        XX
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNXX 139

Query: 127 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKGIV 186
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RN    L PS    + 
Sbjct: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLLPRLGPSLPTIVA 199

Query: 187 PDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCV 246
           P +YL   P+  + EA  I K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 247 NLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER 282
           +LT  DI   TS L++L EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]
BLAST of CsaV3_2G007600 vs. TAIR10
Match: AT5G52480.1 (RNI-like superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 4.8e-06
Identity = 24/52 (46.15%), Postives = 35/52 (67.31%), Query Frame = 0 

Query: 197 DVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNL 249
           D D +A AIA+ M  L +L+L  +KL+   L  I +GCP+L++LDL  C+NL
Sbjct: 119 DDDHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINL 170

[Close]
BLAST of CsaV3_2G007600 vs. TAIR10
Match: AT4G05497.1 (RNI-like superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05
Identity = 56/243 (23.05%), Postives = 86/243 (35.39%), Query Frame = 0 

Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPA 66
           WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+    +  
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-ENLVNSVEL 80

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LDLVAQGCPNLEVXXXXXXXXX 126
           +++      I+ +   AV  S G L  I I +  ++S L+ +A    NL           
Sbjct: 81  FYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 127 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKGI 186
                                                         N   ++        
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDV-------- 200

Query: 187 VPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGC 246
                     +  D  A AIA+ M  L +L+L  + LS   L  I EGCP+LK L L  C
Sbjct: 201 ----------KCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQC 238

Query: 247 VNL 249
           +N+
Sbjct: 261 LNI 238

[Close]
BLAST of CsaV3_2G007600 vs. TAIR10
Match: AT4G05470.1 (RNI-like superfamily protein)

HSP 1 Score: 45.4 bits (106), Expect = 7.0e-05
Identity = 21/58 (36.21%), Postives = 36/58 (62.07%), Query Frame = 0 

Query: 192 DARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCVNLT 250
           D  P + D +A AIA+ M  L +L+L  ++L+   L  I +GCP+L++LD+  C  ++
Sbjct: 216 DMGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRIS 273

[Close]
BLAST of CsaV3_2G007600 vs. Swiss-Prot
Match: sp|Q9FDX1|SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-63
Identity = 138/298 (46.31%), Postives = 164/298 (55.03%), Query Frame = 0 

Query: 5   SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEL 64
           S W  L  E L NI+SRLT+++ W GPM V K W     DP L+S FDLE  F+S P E 
Sbjct: 6   SDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ES 65

Query: 65  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXX 124
              W PEFE K+D MLRS V WS G L+ IR+RHCSD +L   A  CPNL+V        
Sbjct: 66  THLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPN 125

Query: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKG 184
                                                         RN  +    S+H G
Sbjct: 126 VTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIG 185

Query: 185 IVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFG 244
            VP  YLDA PQD D+EA AI K M NLE+LE+ FS+LS K L  ICEGCP L+YLDLFG
Sbjct: 186 SVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFG 245

Query: 245 CVNLTSRDIMNATSSLEHL-EIRKPNFYIPRS--VFHTERYDHWRLYDERFQTDIFRI 300
           CV+L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERY HWRLYDERF     RI
Sbjct: 246 CVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]
BLAST of CsaV3_2G007600 vs. Swiss-Prot
Match: sp|Q9M096|FBL19_ARATH (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.8e-49
Identity = 157/276 (56.88%), Postives = 190/276 (68.84%), Query Frame = 0 

Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPA 66
           W+ELT ECL +I SRL+ EQRW GPMLV K+W  A  DP+L + FDLE RF S P  +  
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFPESI-N 79

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXXXX 126
           WW PEFE K+DS LRS V  S G L+ IRIRHC++ SL   A+ CPNLEV        XX
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNXX 139

Query: 127 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKGIV 186
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RN    L PS    + 
Sbjct: 140 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLLPRLGPSLPTIVA 199

Query: 187 PDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCV 246
           P +YL   P+  + EA  I K+M  L++LE+ +S L+A+ L  +C+GC NL+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 247 NLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTER 282
           +LT  DI   TS L++L EI KP+F  P +V    R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPR 294

[Close]
BLAST of CsaV3_2G007600 vs. Swiss-Prot
Match: sp|Q9S9V8|FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.3e-04
Identity = 56/243 (23.05%), Postives = 86/243 (35.39%), Query Frame = 0 

Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPA 66
           WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  + E+    +  
Sbjct: 21  WAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-ENLVNSVEL 80

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSS-LDLVAQGCPNLEVXXXXXXXXX 126
           +++      I+ +   AV  S G L  I I +  ++S L+ +A    NL           
Sbjct: 81  FYV------IEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPV 140

Query: 127 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKGI 186
                                                         N   ++        
Sbjct: 141 LSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDV-------- 200

Query: 187 VPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGC 246
                     +  D  A AIA+ M  L +L+L  + LS   L  I EGCP+LK L L  C
Sbjct: 201 ----------KCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQC 238

Query: 247 VNL 249
           +N+
Sbjct: 261 LNI 238

[Close]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match: tr|A0A0A0LM72|A0A0A0LM72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 5.5e-137
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 

Query: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60
           MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA
Sbjct: 1   MAEPSPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESA 60

Query: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120
           PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX
Sbjct: 61  PTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPS 180

Query: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240
           QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL
Sbjct: 181 QHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYL 240

Query: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI
Sbjct: 241 DLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 299

[Close]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match: tr|A0A1S3BUE6|A0A1S3BUE6_CUCME (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.5e-123
Identity = 282/303 (93.07%), Postives = 286/303 (94.39%), Query Frame = 0 

Query: 1   MAEP----SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60
           MAEP    S WAELTHECLTNILSRLT+EQRWRGPMLVCKHWFRAA DPSLFSHFDLE R
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWWLPEFETKIDSMLRSAVRWSLGSLSVIR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNN 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     N
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180

Query: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240
           LDPSQHKGIVPDNYLDA PQDVDSEAAAIAKFMHNLE+LELGFSKLSAKALT ICEGCPN
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300
           LKYLDLFGCVNLTSRDI NATSSLE+LEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

[Close]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match: tr|A0A2R6QS71|A0A2R6QS71_ACTCH (F-box protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14569 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 2.5e-89
Identity = 218/296 (73.65%), Postives = 242/296 (81.76%), Query Frame = 0 

Query: 5   SPWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTEL 64
           S WAELT ECLTNILSRL++E RW GPMLVC+ W + + DPSL S FDLE RF+SAP EL
Sbjct: 16  SDWAELTRECLTNILSRLSLEDRWTGPMLVCRSWLQTSKDPSLNSVFDLETRFDSAPAEL 75

Query: 65  PAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXX 124
             WW PEFE +ID+MLRS V WS GSL+ IR+RHCSD SL   A+ CPNL+V        
Sbjct: 76  NRWWTPEFERRIDAMLRSVVDWSDGSLTEIRVRHCSDVSLSFAAERCPNLQVLSIKSCPN 135

Query: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKG 184
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RN  N LDPSQH G
Sbjct: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLMNWLDPSQHTG 195

Query: 185 IVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFG 244
           IVP  +L+A PQD DSEAAAI K M +L +LEL FSKLSAK L LI EGC NL+YLDLFG
Sbjct: 196 IVPQEFLNACPQDGDSEAAAIGKLMPHLLHLELRFSKLSAKGLALISEGCLNLEYLDLFG 255

Query: 245 CVNLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           CVN+TSRDI NA+SSL++L +I+KPNFYIPRSVFHTERY HWRLYDERFQTD+FRI
Sbjct: 256 CVNVTSRDIANASSSLKNLKDIKKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 311

[Close]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match: tr|A0A2I4F9T6|A0A2I4F9T6_9ROSI (F-box protein SKIP1 OS=Juglans regia OX=51240 GN=LOC108996828 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 217/297 (73.06%), Postives = 238/297 (80.13%), Query Frame = 0 

Query: 4   PSP-WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPT 63
           P P WAELTHECL NILSRLT+E RWRG MLVCK WF+A  DP L S FDLE  F+SA  
Sbjct: 16  PGPDWAELTHECLANILSRLTLEHRWRGTMLVCKSWFQACKDPCLHSSFDLEPHFDSA-A 75

Query: 64  ELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXX 123
           +  +WW P+FE K+DSML+S V WS GSLS IR RHCSD SL  VA+ CPNLEV      
Sbjct: 76  DSASWWAPDFERKMDSMLQSVVVWSDGSLSEIRTRHCSDPSLLFVAERCPNLEVLSIKSC 135

Query: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQH 183
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RN  N LDPSQH
Sbjct: 136 PNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLMNWLDPSQH 195

Query: 184 KGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDL 243
            G+VPD YL+A PQD DSEAAAI K +  LE+LE+ FSKLS + LT ICEGCPNLKYLDL
Sbjct: 196 VGVVPDEYLNACPQDGDSEAAAIGKSLPYLEHLEIQFSKLSGRGLTWICEGCPNLKYLDL 255

Query: 244 FGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
            GC+NLT RDI NA+  L+ +EI+KPNFYIPRSVFHTERY HWRLYDERFQTD+FRI
Sbjct: 256 SGCMNLTGRDITNASLGLKDMEIKKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 311

[Close]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match: tr|A0A067KR56|A0A067KR56_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04049 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.1e-88
Identity = 219/294 (74.49%), Postives = 240/294 (81.63%), Query Frame = 0 

Query: 7   WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKRFESAPTELPA 66
           W+ELTHECL NI++RLT+E RWRGPMLVCK W  A  D SL S FDL+  F+S+ TEL  
Sbjct: 26  WSELTHECLINIIARLTLEHRWRGPMLVCKSWLNACKDCSLNSTFDLDALFDSS-TELSR 85

Query: 67  WWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEVXXXXXXXXXX 126
           WW+PEFE K+DSMLRS V WS GSL+ IR RHCSD +L  VA+ CPNLEV        XX
Sbjct: 86  WWIPEFERKMDSMLRSVVAWSDGSLTEIRTRHCSDRALCFVAERCPNLEVLSIKSCPNXX 145

Query: 127 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNFFNNLDPSQHKGIV 186
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNF N LDPSQH GIV
Sbjct: 146 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFMNWLDPSQHMGIV 205

Query: 187 PDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPNLKYLDLFGCV 246
           PD YL+A PQD DSEAAAIAK M  LE+LEL FSKLS+K L  ICE C NL+YLDL GC 
Sbjct: 206 PDGYLNACPQDGDSEAAAIAKSMPQLEHLELRFSKLSSKGLASICEACLNLEYLDLCGCA 265

Query: 247 NLTSRDIMNATSSLEHL-EIRKPNFYIPRSVFHTERYDHWRLYDERFQTDIFRI 300
           NLTSRDI+NATS L++L EI+KPNFYIPRSVFHTERY HWRLYDERFQTD+FRI
Sbjct: 266 NLTSRDIINATSGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 318

The following BLAST results are available for this feature:
BLAST of CsaV3_2G007600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144728.18.2e-137100.00PREDICTED: F-box protein SKIP1-like [Cucumis sativus] >KGN61056.1 hypothetical p... [more]
XP_008452697.12.3e-12393.07PREDICTED: F-box protein SKIP1 [Cucumis melo][more]
XP_022946543.12.6e-11488.96F-box protein SKIP1-like [Cucurbita moschata][more]
XP_023545430.14.4e-11489.30F-box protein SKIP1-like [Cucurbita pepo subsp. pepo][more]
XP_022999743.15.7e-11488.96F-box protein SKIP1-like [Cucurbita maxima][more]
BLAST of CsaV3_2G007600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57900.13.0e-6446.31SKP1 interacting partner 1[more]
AT4G30640.13.2e-5056.88RNI-like superfamily protein[more]
AT5G52480.14.8e-0646.15RNI-like superfamily protein[more]
AT4G05497.12.4e-0523.05RNI-like superfamily protein[more]
AT4G05470.17.0e-0536.21RNI-like superfamily protein[more]
BLAST of CsaV3_2G007600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FDX1|SKIP1_ARATH5.4e-6346.31F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1[more]
sp|Q9M096|FBL19_ARATH5.8e-4956.88Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE... [more]
sp|Q9S9V8|FBL9_ARATH4.3e-0423.05Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4... [more]
BLAST of CsaV3_2G007600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LM72|A0A0A0LM72_CUCSA5.5e-137100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1[more]
tr|A0A1S3BUE6|A0A1S3BUE6_CUCME1.5e-12393.07F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1[more]
tr|A0A2R6QS71|A0A2R6QS71_ACTCH2.5e-8973.65F-box protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc14569... [more]
tr|A0A2I4F9T6|A0A2I4F9T6_9ROSI1.2e-8873.06F-box protein SKIP1 OS=Juglans regia OX=51240 GN=LOC108996828 PE=4 SV=1[more]
tr|A0A067KR56|A0A067KR56_JATCU2.1e-8874.49Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04049 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR032675LRR_dom_sf
IPR001810F-box_dom
IPR001611Leu-rich_rpt
IPR006553Leu-rich_rpt_Cys-con_subtyp
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G007600.1CsaV3_2G007600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 234..259
e-value: 0.014
score: 24.5
coord: 209..233
e-value: 590.0
score: 0.7
coord: 137..162
e-value: 0.0086
score: 25.3
coord: 111..136
e-value: 0.0012
score: 28.1
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 137..157
e-value: 0.33
score: 11.0
IPR001810F-box domainPFAMPF12937F-box-likecoord: 12..52
e-value: 1.3E-5
score: 24.9
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 74..273
e-value: 5.6E-33
score: 116.0
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 6..47
e-value: 3.8E-9
score: 38.4
NoneNo IPR availablePANTHERPTHR44078:SF5F-BOX PROTEIN SKIP19-RELATEDcoord: 3..250
NoneNo IPR availablePANTHERPTHR44078FAMILY NOT NAMEDcoord: 3..250
NoneNo IPR availableSUPERFAMILYSSF52047RNI-likecoord: 87..265
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 2..64

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G007600CSPI02G05250Wild cucumber (PI 183967)cpicucB080
CsaV3_2G007600Cucsa.090110Cucumber (Gy14) v1cgycucB097
CsaV3_2G007600CmaCh12G008520Cucurbita maxima (Rimu)cmacucB0205
CsaV3_2G007600CmaCh05G010300Cucurbita maxima (Rimu)cmacucB0934
CsaV3_2G007600CmoCh12G008560Cucurbita moschata (Rifu)cmocucB0187
CsaV3_2G007600CmoCh05G010420Cucurbita moschata (Rifu)cmocucB0924
CsaV3_2G007600Cp4.1LG11g08370Cucurbita pepo (Zucchini)cpecucB0115
CsaV3_2G007600Cp4.1LG07g07080Cucurbita pepo (Zucchini)cpecucB1017
CsaV3_2G007600CsGy2G005390Cucumber (Gy14) v2cgybcucB064
CsaV3_2G007600Carg11966Silver-seed gourdcarcucB0598
CsaV3_2G007600Carg16430Silver-seed gourdcarcucB0952
CsaV3_2G007600Cla020020Watermelon (97103) v1cucwmB159
CsaV3_2G007600MELO3C004126Melon (DHL92) v3.5.1cucmeB141
CsaV3_2G007600ClCG02G014400Watermelon (Charleston Gray)cucwcgB137
CsaV3_2G007600Lsi11G006910Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G007600MELO3C004126.2Melon (DHL92) v3.6.1cucmedB134
CsaV3_2G007600Cla97C02G040160Watermelon (97103) v2cucwmbB123
CsaV3_2G007600Bhi06G001222Wax gourdcucwgoB145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G007600Cucumber (Chinese Long) v3cuccucB008
CsaV3_2G007600Silver-seed gourdcarcucB0148
CsaV3_2G007600Silver-seed gourdcarcucB0538
CsaV3_2G007600Cucumber (Gy14) v2cgybcucB017
CsaV3_2G007600Cucurbita maxima (Rimu)cmacucB0083
CsaV3_2G007600Cucurbita maxima (Rimu)cmacucB0136
CsaV3_2G007600Cucurbita moschata (Rifu)cmocucB0072
CsaV3_2G007600Cucurbita moschata (Rifu)cmocucB0122
CsaV3_2G007600Cucurbita pepo (Zucchini)cpecucB0452
CsaV3_2G007600Cucurbita pepo (Zucchini)cpecucB0827
CsaV3_2G007600Wild cucumber (PI 183967)cpicucB020
CsaV3_2G007600Melon (DHL92) v3.5.1cucmeB118
CsaV3_2G007600Melon (DHL92) v3.6.1cucmedB111
CsaV3_2G007600Watermelon (Charleston Gray)cucwcgB158
CsaV3_2G007600Watermelon (97103) v1cucwmB182
CsaV3_2G007600Watermelon (97103) v2cucwmbB145
CsaV3_2G007600Wax gourdcucwgoB221