Carg16430 (gene) Silver-seed gourd

Overview
NameCarg16430
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box protein SKIP1
LocationCucurbita_argyrosperma_scaffold_130 : 419898 .. 421943 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCCGTCGTCGGAATCATCATTGGCGTCGCCGGCATGGGCGGAGCTGACGCACGAATGCCTAACCAACGTCTTCTCACGGCTCAGTATGGAGCAGCGGTGGCGCGGCCCGATGTTAGTGTGCAAGCACTGGCTCCATGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGACCTTGAGCCCATGTTCGACTCCGGCCCCACCGAGTCGCCGGCCTGGTGGACGCCCCAGTTCGAGACGAAGATTGATTCCATGCTGCGGTCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCTGTTCTTCGGATCAGACACTGCTCCGATTCATCTCTCGATTGTGTGGCTCAAAGGTAATTTAATTTACTGACCTTCTCATTGTTTCTTCGTGTTTTTATGGATGAGGATGGTTTGTTTTAATTAGGGTAATTAGGGTAATTAGGGTAATTAGGGCAAAGTTATGGTTTTCCCAAATTCTGTACTCCTGTTAAGGTGTTTTTTCCGATTCAGGAAACAGTTGGTGATTAGTCAATGATGCAATATCGCTTGATCTTTGCATATGTTTTCACCGATCATTATGCAGTTTCTTAGAATAAAAGATGTTGGATTTCATATACAAGATGTTGGGCTTTGGGATGCGATTGATGAGTAAAATCCTAATGGGCTACTTGTGTACTGTGATTATCTTAGAGATTACGTATCGGTTGGAGAGGAGAAGGAAGCAATCCTAATAAGAGTGTGGAAATCTCTCCCTAACCGACGCATTTTAAAACCTTGAGAGTGGAAGCCTGAAAGGGGAAGACAATATCGGCTAGTGGTGGGCTTAGGTACAAATGGTATCAAAGCTAGATACTGAGCGGTGTGTTAATGAGGACACTAGGCCTCCAAGGTGGTGGATTGTGAGATCCTATATCAGTTGGAGAGGGGAACGAAACATTTATAGCAACGGTGTTGAAATCTCTCCCTAGAGGGGAACAAAACATTTCTAATAAGGGTGTTGAAACTTCTTCCTAGCAGACGTGTTTTAAAACCTTGAGGGGAAGCCCGAAAGGAAAATTCAAAGAGGACAATATCTACTAGTGTCAGCTTGGGTTGTTACAAATGGTATCAAAGTCAGACACTAGACAGCGTGCCAGCAAGGACGCTGGCCCCCAAGGGGTGGATTGTGAGATCCGATATCGGTTGGAGAGGGAAATGAAACATTCCTAATAAAGCTAGCAGAAGCGTTTTAAAACCTTGAAGGAAAGCCTGAAATGAAAAGTCCAAAAAGGATAATATCTGTTAGCGGTGAACTTGGGCTAGGCTGTACGAACTTTGCATAAGGTAGATATTGTTAATCTTAGTAGTCTTTGAGGCCATAAGTTTGTGGTTGGAACAAATCAAGCAATGAGATAAGCTGAAATGTGTGCAAAAGGGGAAAACGATATAGAATTGGTTGGCTCGAATTAATGGCCTACTACTACTTCACAATTTAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGTCAAAAGCTTCGGGAAGTCGACATAAGCTACTGTCACGAAATCTCGAACATATCTTTGGCGTTGATTGGCAAGCACTGTTCGAATATCAAGACTCTAAAACGAAACTTTTTTAATAATCTAGATACTTCCCAACATATGGGAACTGTCCCTGACAGTTATCTAAATGCCTGCCCTCAAGAGGTGGATTCAGAAGCTGCGGCTATTGCAAAGTTCATGCCCAACTTAGAGCACCTTGAACTCTGCTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATATGTGAAGGATGTCTAAACCTCAAGTACTTGGATCTGTTTGGGTGTATGAACTTGACAAGCCGTGATATAGCAAATGCTACATCAAAATTGGAGAATTTGGAGGTTAGGAAACCGAGTTTCGATATTCCGAGGCCAGTCTTTCACACGGAGAGGTATGGTCATTGGAGGTTGTACGACGAGAGATTCCAAACAGATAGTTTCCGACTTTGA

mRNA sequence

ATGGCAGAGCCGTCGTCGGAATCATCATTGGCGTCGCCGGCATGGGCGGAGCTGACGCACGAATGCCTAACCAACGTCTTCTCACGGCTCAGTATGGAGCAGCGGTGGCGCGGCCCGATGTTAGTGTGCAAGCACTGGCTCCATGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGACCTTGAGCCCATGTTCGACTCCGGCCCCACCGAGTCGCCGGCCTGGTGGACGCCCCAGTTCGAGACGAAGATTGATTCCATGCTGCGGTCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCTGTTCTTCGGATCAGACACTGCTCCGATTCATCTCTCGATTGTGTGGCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGTCAAAAGCTTCGGGAAGTCGACATAAGCTACTGTCACGAAATCTCGAACATATCTTTGGCGTTGATTGGCAAGCACTGTTCGAATATCAAGACTCTAAAACGAAACTTTTTTAATAATCTAGATACTTCCCAACATATGGGAACTGTCCCTGACAGTTATCTAAATGCCTGCCCTCAAGAGGTGGATTCAGAAGCTGCGGCTATTGCAAAGTTCATGCCCAACTTAGAGCACCTTGAACTCTGCTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATATGTGAAGGATGTCTAAACCTCAAGTACTTGGATCTGTTTGGGTGTATGAACTTGACAAGCCGTGATATAGCAAATGCTACATCAAAATTGGAGAATTTGGAGGTTAGGAAACCGAGTTTCGATATTCCGAGGCCAGTCTTTCACACGGAGAGGTATGGTCATTGGAGGTTGTACGACGAGAGATTCCAAACAGATAGTTTCCGACTTTGA

Coding sequence (CDS)

ATGGCAGAGCCGTCGTCGGAATCATCATTGGCGTCGCCGGCATGGGCGGAGCTGACGCACGAATGCCTAACCAACGTCTTCTCACGGCTCAGTATGGAGCAGCGGTGGCGCGGCCCGATGTTAGTGTGCAAGCACTGGCTCCATGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGACCTTGAGCCCATGTTCGACTCCGGCCCCACCGAGTCGCCGGCCTGGTGGACGCCCCAGTTCGAGACGAAGATTGATTCCATGCTGCGGTCTGTCGTCCATTGGAGCCTTGGTTCTCTCTCTGTTCTTCGGATCAGACACTGCTCCGATTCATCTCTCGATTGTGTGGCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGTCAAAAGCTTCGGGAAGTCGACATAAGCTACTGTCACGAAATCTCGAACATATCTTTGGCGTTGATTGGCAAGCACTGTTCGAATATCAAGACTCTAAAACGAAACTTTTTTAATAATCTAGATACTTCCCAACATATGGGAACTGTCCCTGACAGTTATCTAAATGCCTGCCCTCAAGAGGTGGATTCAGAAGCTGCGGCTATTGCAAAGTTCATGCCCAACTTAGAGCACCTTGAACTCTGCTTCTCTAAACTATCTGCTAAAGCTCTTAGTTTGATATGTGAAGGATGTCTAAACCTCAAGTACTTGGATCTGTTTGGGTGTATGAACTTGACAAGCCGTGATATAGCAAATGCTACATCAAAATTGGAGAATTTGGAGGTTAGGAAACCGAGTTTCGATATTCCGAGGCCAGTCTTTCACACGGAGAGGTATGGTCATTGGAGGTTGTACGACGAGAGATTCCAAACAGATAGTTTCCGACTTTGA

Protein sequence

MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCSNIKTLKRNFFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL
Homology
[Close]
BLAST of Carg16430 vs. NCBI nr
Match: XP_022937978.1 (F-box protein SKIP1-like [Cucurbita moschata])

HSP 1 Score: 508.1 bits (1307), Expect = 2.1e-140
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0 

Query: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60
           MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD
Sbjct: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60

Query: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120
           LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP
Sbjct: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120

Query: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180
           NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN
Sbjct: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180

Query: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240
           FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE
Sbjct: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240

Query: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300
           GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Sbjct: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300

Query: 301 QTDSFRL 308
           QTDSFRL
Sbjct: 301 QTDSFRL 307

[Close]
BLAST of Carg16430 vs. NCBI nr
Match: XP_023536859.1 (F-box protein SKIP1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 499.6 bits (1285), Expect = 7.6e-138
Identity = 299/307 (97.39%), Postives = 302/307 (98.37%), Query Frame = 0 

Query: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60
           MAEPSSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHWLHAATDPSLF+HFD
Sbjct: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLTMEQRWRGPMLVCKHWLHAATDPSLFTHFD 60

Query: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120
           LEPMF+S PTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP
Sbjct: 61  LEPMFESAPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120

Query: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180
           NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   N
Sbjct: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKRN 180

Query: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240
            FNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE
Sbjct: 181 LFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240

Query: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300
           GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Sbjct: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300

Query: 301 QTDSFRL 308
           QTDSFRL
Sbjct: 301 QTDSFRL 307

[Close]
BLAST of Carg16430 vs. NCBI nr
Match: XP_022969584.1 (F-box protein SKIP1-like [Cucurbita maxima])

HSP 1 Score: 494.6 bits (1272), Expect = 2.5e-136
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0 

Query: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60
           MAE SSESSLASPAWAELTHECLTNVFSRL+MEQRWRGPMLVCKHW HAATDP LFSHFD
Sbjct: 1   MAEMSSESSLASPAWAELTHECLTNVFSRLTMEQRWRGPMLVCKHWFHAATDPCLFSHFD 60

Query: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120
           LEPMFDS PTESPAWWTP+FETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP
Sbjct: 61  LEPMFDSAPTESPAWWTPRFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120

Query: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180
           NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN
Sbjct: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180

Query: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240
           FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE
Sbjct: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240

Query: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300
           GCLNLKYLDLFGC+NLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF
Sbjct: 241 GCLNLKYLDLFGCVNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300

Query: 301 QTDSFRL 308
           QTDSFRL
Sbjct: 301 QTDSFRL 307

[Close]
BLAST of Carg16430 vs. NCBI nr
Match: XP_022946543.1 (F-box protein SKIP1-like [Cucurbita moschata])

HSP 1 Score: 411.0 bits (1055), Expect = 3.6e-111
Identity = 255/298 (85.57%), Postives = 271/298 (90.94%), Query Frame = 0 

Query: 10  LASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGP 69
           +A P+WAELT ECLTN+FSRL++EQRWRGPMLVCK WL AATD SLFSHFDLEP FDS P
Sbjct: 1   MAEPSWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLEPRFDSTP 60

Query: 70  TESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXX 129
           TESPAWW+PQFE KIDSMLRS V WSLGSLS++RIRHCSDSSL  VAQ CPNLEVXXXXX
Sbjct: 61  TESPAWWSPQFEAKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVXXXXX 120

Query: 130 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQ 189
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NFFN LD SQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFFNTLDPSQ 180

Query: 190 HMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLD 249
             G VPDSYLNACPQ+VDSEA AIAKFMPNLEHL+LCFSKLSAKAL+LIC+GC NLKYLD
Sbjct: 181 QKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLQLCFSKLSAKALTLICKGCPNLKYLD 240

Query: 250 LFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL 308
           LFGC+NLTSRDI NATS LENLE+RKP+F IPR VFHTERYGHWRLYDERFQTD FR+
Sbjct: 241 LFGCVNLTSRDIVNATSNLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]
BLAST of Carg16430 vs. NCBI nr
Match: XP_022999743.1 (F-box protein SKIP1-like [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110
Identity = 254/298 (85.23%), Postives = 271/298 (90.94%), Query Frame = 0 

Query: 10  LASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGP 69
           +A  +WAELT ECLTN+FSRL++EQRWRGPMLVCK WL AATD SLFSHFDL+P FDS P
Sbjct: 1   MAEASWAELTQECLTNIFSRLTIEQRWRGPMLVCKLWLRAATDSSLFSHFDLQPRFDSTP 60

Query: 70  TESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXX 129
           TESPAWW+PQFETKIDSMLRS V WSLGSLS++RIRHCSDSSL  VAQ CPNLEVXXXXX
Sbjct: 61  TESPAWWSPQFETKIDSMLRSAVQWSLGSLSLIRIRHCSDSSLQLVAQGCPNLEVXXXXX 120

Query: 130 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQ 189
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NFFN LD SQ
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFFNTLDPSQ 180

Query: 190 HMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLD 249
             G VPDSYLNACPQ+VDSEA AIAKFMPNLEHLELCFSK+SAKAL+LIC+GC NLKYLD
Sbjct: 181 QKGIVPDSYLNACPQDVDSEAVAIAKFMPNLEHLELCFSKVSAKALTLICKGCPNLKYLD 240

Query: 250 LFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL 308
           LFGC+NLTSRDI NATS LENLE+RKP+F IPR VFHTERYGHWRLYDERFQTD FR+
Sbjct: 241 LFGCVNLTSRDIVNATSSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 298

[Close]
BLAST of Carg16430 vs. TAIR10
Match: AT5G57900.1 (SKP1 interacting partner 1)

HSP 1 Score: 246.5 bits (628), Expect = 2.1e-65
Identity = 135/296 (45.61%), Postives = 171/296 (57.77%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           W  L  E L N+ SRL++++ W GPM V K WL    DP L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXXXX 134
            W+P+FE K+D MLRSVV WS G L+ +R+RHCSD +L   A RCPNL+V          
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGTV 194
                                                        N  +   +S+H+G+V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIGSV 187

Query: 195 PDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCM 254
           P  YL+ACPQ+ D+EA AI K M NLEHLE+ FS+LS K L+ ICEGC  L+YLDLFGC+
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 255 NLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL 308
           +L+SRDI +  S+L+ L EV+KP   +PR   V  TERYGHWRLYDERF   + R+
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]
BLAST of Carg16430 vs. TAIR10
Match: AT4G30640.1 (RNI-like superfamily protein)

HSP 1 Score: 201.4 bits (511), Expect = 7.8e-52
Identity = 162/283 (57.24%), Postives = 195/283 (68.90%), Query Frame = 0 

Query: 13  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTES 72
           P W+ELT ECL ++FSRLS EQRW GPMLV K+W++A  DP+L + FDLE  F S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 73  PAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXX 132
             WWTP+FE K+DS LRSVV  S G L+ +RIRHC++ SL   A+RCPNLEV        
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMG 192
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N    L  S    
Sbjct: 138 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLLPRLGPSLPTI 197

Query: 193 TVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFG 252
             P  YL   P+  + EA  I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 253 CMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR 295
           C++LT  DI   TS L+NL E+ KP F+ P  V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

[Close]
BLAST of Carg16430 vs. TAIR10
Match: AT5G52480.1 (RNI-like superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 0 

Query: 207 DSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNLTSRDIANATS 266
           D +A AIA+ MP L HL+LC +KL+   L+ I +GC +L++LDL  C+NL          
Sbjct: 121 DHDAIAIAESMPKLRHLQLCGNKLTKTGLNAILDGCPHLEHLDLRQCINLVGNLEKRCFE 180

Query: 267 KLENLEVRKPSFDIPRPVFHTERYGHW 294
           K+++L     S     P      Y HW
Sbjct: 181 KIKDLRRHNDSTSADYPFSFETYYFHW 207

[Close]
BLAST of Carg16430 vs. TAIR10
Match: AT4G05460.1 (RNI-like superfamily protein)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-07
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 199 LNACPQ-EVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL 257
           LN  PQ E D +A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Sbjct: 172 LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNV 230

[Close]
BLAST of Carg16430 vs. TAIR10
Match: AT4G05475.1 (RNI-like superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 54/244 (22.13%), Postives = 83/244 (34.02%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           W +L  E  T++  RLS+         +C+ W     DPS++   +L             
Sbjct: 40  WVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCL--------- 99

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRH-CSDSSLDCVAQRCPNLEVXXXXXXXXX 134
                +E   +SM R +V  S G L  + I H  SDS L  +  R  NL+          
Sbjct: 100 ----MYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPM 159

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGT 194
                                                                    +G 
Sbjct: 160 TNKGVMNGIEKLPLLETLVIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGY 219

Query: 195 VPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNL-KYLDLFG 254
           +P         E D +A AIA+ MP L HL+L  + L+   L+ I +GC +L ++LD+  
Sbjct: 220 IP-------LLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRK 263

Query: 255 CMNL 257
           C N+
Sbjct: 280 CFNI 263

[Close]
BLAST of Carg16430 vs. Swiss-Prot
Match: sp|Q9FDX1|SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.8e-64
Identity = 135/296 (45.61%), Postives = 171/296 (57.77%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           W  L  E L N+ SRL++++ W GPM V K WL    DP L+S FDLEP FDS P ES  
Sbjct: 8   WGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP-ESTH 67

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXXXX 134
            W+P+FE K+D MLRSVV WS G L+ +R+RHCSD +L   A RCPNL+V          
Sbjct: 68  LWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSSPNVT 127

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGTV 194
                                                        N  +   +S+H+G+V
Sbjct: 128 DASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRHIGSV 187

Query: 195 PDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCM 254
           P  YL+ACPQ+ D+EA AI K M NLEHLE+ FS+LS K L+ ICEGC  L+YLDLFGC+
Sbjct: 188 PTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDLFGCV 247

Query: 255 NLTSRDIANATSKLENL-EVRKPSFDIPR--PVFHTERYGHWRLYDERFQTDSFRL 308
           +L+SRDI +  S+L+ L EV+KP   +PR   V  TERYGHWRLYDERF   + R+
Sbjct: 248 HLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]
BLAST of Carg16430 vs. Swiss-Prot
Match: sp|Q9M096|FBL19_ARATH (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.4e-50
Identity = 162/283 (57.24%), Postives = 195/283 (68.90%), Query Frame = 0 

Query: 13  PAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTES 72
           P W+ELT ECL ++FSRLS EQRW GPMLV K+W++A  DP+L + FDLE  F S P ES
Sbjct: 18  PDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ES 77

Query: 73  PAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXX 132
             WWTP+FE K+DS LRSVV  S G L+ +RIRHC++ SL   A+RCPNLEV        
Sbjct: 78  INWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPN 137

Query: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMG 192
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  N    L  S    
Sbjct: 138 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNLLPRLGPSLPTI 197

Query: 193 TVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFG 252
             P  YL   P+  + EA  I K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL G
Sbjct: 198 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 257

Query: 253 CMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWR 295
           C++LT  DI   TS L+NL E+ KP F+ P  V    R G+ R
Sbjct: 258 CISLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

[Close]
BLAST of Carg16430 vs. Swiss-Prot
Match: sp|Q9S9V9|FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.2e-06
Identity = 62/272 (22.79%), Postives = 96/272 (35.29%), Query Frame = 0 

Query: 1   MAEPSSESSLASPA---------WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAAT 60
           +A  SS SS   P+         WAEL  +  +++  RL   +  +    VCK W     
Sbjct: 158 IASSSSLSSTPLPSLMKDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCK 217

Query: 61  DPSLFSHFDLEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSS 120
           DPS++   D++   D             F+  ++SM R  V  S G L  + I +   + 
Sbjct: 218 DPSMWRKIDIDNRNDRA----------AFKYDLESMCRHAVDRSHGGLIEIEIWYYGTND 277

Query: 121 LDC-VAQRCPNLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           L   +A R  NL+                                               
Sbjct: 278 LIMYIADRSSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGESLR------ 337

Query: 181 XXXXXXXXXNFFNNLDTSQHMGTVPDSYLNACPQEV------DSEAAAIAKFMPNLEHLE 240
                          D  +    +    LN  P+ +      D  A AIA+ MP L HL+
Sbjct: 338 ---------------DIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAESMPELRHLQ 397

Query: 241 LCFSKLSAKALSLICEGCLNLKYLDLFGCMNL 257
           L  + L+ K L+ I +GC +L++LDL  C N+
Sbjct: 398 LLGNGLTNKGLNAILDGCPHLEHLDLRQCFNI 398

[Close]
BLAST of Carg16430 vs. Swiss-Prot
Match: sp|Q9M0U9|SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.1e-06
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0 

Query: 199 LNACPQ-EVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCMNL 257
           LN  PQ E D +A AIA+ MP L HL+LC + LS   L+ I + C NL++LDL  C N+
Sbjct: 172 LNKHPQKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNV 230

[Close]
BLAST of Carg16430 vs. Swiss-Prot
Match: sp|Q9M0U7|FB221_ARATH (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 4.0e-05
Identity = 54/244 (22.13%), Postives = 83/244 (34.02%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           W +L  E  T++  RLS+         +C+ W     DPS++   +L             
Sbjct: 40  WVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCL--------- 99

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRH-CSDSSLDCVAQRCPNLEVXXXXXXXXX 134
                +E   +SM R +V  S G L  + I H  SDS L  +  R  NL+          
Sbjct: 100 ----MYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKSLGISIYEPM 159

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGT 194
                                                                    +G 
Sbjct: 160 TNKGVMNGIEKLPLLETLVIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGY 219

Query: 195 VPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNL-KYLDLFG 254
           +P         E D +A AIA+ MP L HL+L  + L+   L+ I +GC +L ++LD+  
Sbjct: 220 IP-------LLECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRK 263

Query: 255 CMNL 257
           C N+
Sbjct: 280 CFNI 263

[Close]
BLAST of Carg16430 vs. TrEMBL
Match: tr|A0A1S3BUE6|A0A1S3BUE6_CUCME (F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 7.6e-110
Identity = 260/307 (84.69%), Postives = 276/307 (89.90%), Query Frame = 0 

Query: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60
           MAEPSSESS    +WAELTHECLTN+ SRL++EQRWRGPMLVCKHW  AA DPSLFSHFD
Sbjct: 1   MAEPSSESS----SWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFD 60

Query: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120
           LEP F+S PTESPAWW P+FETKIDSMLRS V WSLGSLSV+R+RHCSDSSLD VAQ CP
Sbjct: 61  LEPRFESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCP 120

Query: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180
           NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240
              NLD SQH G VPD+YL+ACPQ+VDSEAAAIAKFM NLEHLEL FSKLSAKAL+ ICE
Sbjct: 181 XXXNLDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICE 240

Query: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300
           GC NLKYLDLFGC+NLTSRDIANATS LENLE+RKP+F IPR VFHTERY HWRLYDERF
Sbjct: 241 GCPNLKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERF 300

Query: 301 QTDSFRL 308
           QTD FR+
Sbjct: 301 QTDIFRI 303

[Close]
BLAST of Carg16430 vs. TrEMBL
Match: tr|A0A0A0LM72|A0A0A0LM72_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 9.3e-108
Identity = 257/307 (83.71%), Postives = 272/307 (88.60%), Query Frame = 0 

Query: 1   MAEPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFD 60
           MAEPS         WAELTHECLTN+ SRL+MEQRWRGPMLVCKHW  AATDPSLFSHFD
Sbjct: 1   MAEPS--------PWAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFD 60

Query: 61  LEPMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCP 120
           LE  F+S PTE PAWW P+FETKIDSMLRS V WSLGSLSV+RIRHCSDSSLD VAQ CP
Sbjct: 61  LEKRFESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCP 120

Query: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 180
           NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N
Sbjct: 121 NLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRN 180

Query: 181 FFNNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICE 240
           FFNNLD SQH G VPD+YL+A PQ+VDSEAAAIAKFM NLE+LEL FSKLSAKAL+LICE
Sbjct: 181 FFNNLDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICE 240

Query: 241 GCLNLKYLDLFGCMNLTSRDIANATSKLENLEVRKPSFDIPRPVFHTERYGHWRLYDERF 300
           GC NLKYLDLFGC+NLTSRDI NATS LE+LE+RKP+F IPR VFHTERY HWRLYDERF
Sbjct: 241 GCPNLKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERF 299

Query: 301 QTDSFRL 308
           QTD FR+
Sbjct: 301 QTDIFRI 299

[Close]
BLAST of Carg16430 vs. TrEMBL
Match: tr|F6HYK3|F6HYK3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00430 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.5e-89
Identity = 210/294 (71.43%), Postives = 235/294 (79.93%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           W+ELTHECLTNV SRL++  RW GPMLVCK WLHA  DPSLFS  DLE  FDS PTES  
Sbjct: 16  WSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTLDLEVHFDS-PTESAR 75

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXXXX 134
           WWTP+FE KID+MLRS+  WS GS++ +R+RHCSD SL   A RC NLEV         X
Sbjct: 76  WWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADRCSNLEVLSIKSCPNVX 135

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGTV 194
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      N  N LD SQH+G V
Sbjct: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKILKRNLMNWLDPSQHIGIV 195

Query: 195 PDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCM 254
           P+ YLNACPQ+ DSEAAAI K MP+LEHLEL FSK+SAK L+LIC+GCLNL+YLDL GC 
Sbjct: 196 PNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLALICDGCLNLEYLDLSGCA 255

Query: 255 NLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL 308
           NLTSRDIANATS L+NL ++ KP+F IPR VFH ERYGHWRLYD+RFQTD+FR+
Sbjct: 256 NLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLYDDRFQTDTFRI 308

[Close]
BLAST of Carg16430 vs. TrEMBL
Match: tr|A0A067KR56|A0A067KR56_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04049 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88
Identity = 220/306 (71.90%), Postives = 245/306 (80.07%), Query Frame = 0 

Query: 3   EPSSESSLASPAWAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLE 62
           E  +E+ L    W+ELTHECL N+ +RL++E RWRGPMLVCK WL+A  D SL S FDL+
Sbjct: 14  ETGTETELLGRDWSELTHECLINIIARLTLEHRWRGPMLVCKSWLNACKDCSLNSTFDLD 73

Query: 63  PMFDSGPTESPAWWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNL 122
            +FDS  TE   WW P+FE K+DSMLRSVV WS GSL+ +R RHCSD +L  VA+RCPNL
Sbjct: 74  ALFDSS-TELSRWWIPEFERKMDSMLRSVVAWSDGSLTEIRTRHCSDRALCFVAERCPNL 133

Query: 123 EVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFF 182
           EV        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NF 
Sbjct: 134 EVLSIKSCPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFM 193

Query: 183 NNLDTSQHMGTVPDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGC 242
           N LD SQHMG VPD YLNACPQ+ DSEAAAIAK MP LEHLEL FSKLS+K L+ ICE C
Sbjct: 194 NWLDPSQHMGIVPDGYLNACPQDGDSEAAAIAKSMPQLEHLELRFSKLSSKGLASICEAC 253

Query: 243 LNLKYLDLFGCMNLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWRLYDERFQ 302
           LNL+YLDL GC NLTSRDI NATS L+NL E++KP+F IPR VFHTERYGHWRLYDERFQ
Sbjct: 254 LNLEYLDLCGCANLTSRDIINATSGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQ 313

Query: 303 TDSFRL 308
           TD FR+
Sbjct: 314 TDVFRI 318

[Close]
BLAST of Carg16430 vs. TrEMBL
Match: tr|A0A1Q3CT10|A0A1Q3CT10_CEPFO (LRR_1 domain-containing protein/LRR_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26652 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88
Identity = 215/294 (73.13%), Postives = 240/294 (81.63%), Query Frame = 0 

Query: 15  WAELTHECLTNVFSRLSMEQRWRGPMLVCKHWLHAATDPSLFSHFDLEPMFDSGPTESPA 74
           WAELT ECLTN+ SRL++E+RWRGPMLVCK WL A+ DPSL S FDL+  FDS PTES  
Sbjct: 21  WAELTQECLTNILSRLTLEERWRGPMLVCKSWLKASQDPSLNSVFDLDAHFDS-PTESSR 80

Query: 75  WWTPQFETKIDSMLRSVVHWSLGSLSVLRIRHCSDSSLDCVAQRCPNLEVXXXXXXXXXX 134
           WW P FE K+DSMLRSVV WS GSL+ +R RHCSD  L+  AQRCPNL+V        XX
Sbjct: 81  WWPPDFERKMDSMLRSVVVWSDGSLTHIRTRHCSDLPLNLAAQRCPNLQVLSIKSCPNXX 140

Query: 135 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFFNNLDTSQHMGTV 194
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NF N LD SQH+G V
Sbjct: 141 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNFMNWLDPSQHVGIV 200

Query: 195 PDSYLNACPQEVDSEAAAIAKFMPNLEHLELCFSKLSAKALSLICEGCLNLKYLDLFGCM 254
           PD YLNACPQ+ D+EAAA+ KFMP+LEHLE+ FSKLS + L  ICEGCLNL+YLDL GC 
Sbjct: 201 PDKYLNACPQDGDAEAAAVGKFMPHLEHLEIRFSKLSGRGLGSICEGCLNLEYLDLSGCA 260

Query: 255 NLTSRDIANATSKLENL-EVRKPSFDIPRPVFHTERYGHWRLYDERFQTDSFRL 308
           NLT RDIANATS L+N+ +V+KP+F IPR VFH ERYGHWRLYDERFQTD FR+
Sbjct: 261 NLTGRDIANATSNLKNVKDVKKPNFYIPRSVFHAERYGHWRLYDERFQTDVFRI 313

The following BLAST results are available for this feature:
BLAST of Carg16430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022937978.12.1e-140100.00F-box protein SKIP1-like [Cucurbita moschata][more]
XP_023536859.17.6e-13897.39F-box protein SKIP1 [Cucurbita pepo subsp. pepo][more]
XP_022969584.12.5e-13697.72F-box protein SKIP1-like [Cucurbita maxima][more]
XP_022946543.13.6e-11185.57F-box protein SKIP1-like [Cucurbita moschata][more]
XP_022999743.11.8e-11085.23F-box protein SKIP1-like [Cucurbita maxima][more]
BLAST of Carg16430 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57900.12.1e-6545.61SKP1 interacting partner 1[more]
AT4G30640.17.8e-5257.24RNI-like superfamily protein[more]
AT5G52480.11.6e-0936.78RNI-like superfamily protein[more]
AT4G05460.14.5e-0749.15RNI-like superfamily protein[more]
AT4G05475.12.2e-0622.13RNI-like superfamily protein[more]
BLAST of Carg16430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FDX1|SKIP1_ARATH3.8e-6445.61F-box protein SKIP1 OS=Arabidopsis thaliana OX=3702 GN=SKIP1 PE=1 SV=1[more]
sp|Q9M096|FBL19_ARATH1.4e-5057.24Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana OX=3702 GN=FBL19 PE... [more]
sp|Q9S9V9|FBL23_ARATH6.2e-0622.79Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
sp|Q9M0U9|SKI19_ARATH8.1e-0649.15F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
sp|Q9M0U7|FB221_ARATH4.0e-0522.13Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE... [more]
BLAST of Carg16430 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BUE6|A0A1S3BUE6_CUCME7.6e-11084.69F-box protein SKIP1 OS=Cucumis melo OX=3656 GN=LOC103493639 PE=4 SV=1[more]
tr|A0A0A0LM72|A0A0A0LM72_CUCSA9.3e-10883.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G036050 PE=4 SV=1[more]
tr|F6HYK3|F6HYK3_VITVI1.5e-8971.43Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0037g00430 PE=4 SV=... [more]
tr|A0A067KR56|A0A067KR56_JATCU1.6e-8871.90Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_04049 PE=4 SV=1[more]
tr|A0A1Q3CT10|A0A1Q3CT10_CEPFO1.6e-8873.13LRR_1 domain-containing protein/LRR_6 domain-containing protein OS=Cephalotus fo... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf
IPR006553Leu-rich_rpt_Cys-con_subtyp
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg16430-RACarg16430-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..274
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 14..55
e-value: 1.4E-9
score: 39.8
NoneNo IPR availablePANTHERPTHR44078FAMILY NOT NAMEDcoord: 4..256
NoneNo IPR availablePANTHERPTHR44078:SF5F-BOX PROTEIN SKIP19-RELATEDcoord: 4..256
NoneNo IPR availableSUPERFAMILYSSF52047RNI-likecoord: 94..272
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 242..267
e-value: 5.3
score: 16.0
coord: 119..144
e-value: 3.1E-5
score: 33.4
coord: 96..118
e-value: 590.0
score: 0.7
coord: 145..170
e-value: 0.0038
score: 26.5
coord: 217..241
e-value: 330.0
score: 2.7
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 82..277
e-value: 1.2E-31
score: 111.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 145..161
e-value: 1.1
score: 9.3
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 15..70

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg16430Cla020020Watermelon (97103) v1carwmB0913
Carg16430Csa2G036050Cucumber (Chinese Long) v2carcuB0929
Carg16430MELO3C004126Melon (DHL92) v3.5.1carmeB0900
Carg16430ClCG02G014400Watermelon (Charleston Gray)carwcgB0889
Carg16430CSPI02G05250Wild cucumber (PI 183967)carcpiB0952
Carg16430Cucsa.090110Cucumber (Gy14) v1carcgyB1029
Carg16430CmaCh05G010300Cucurbita maxima (Rimu)carcmaB1255
Carg16430CmaCh12G008520Cucurbita maxima (Rimu)carcmaB1254
Carg16430CmoCh05G010420Cucurbita moschata (Rifu)carcmoB1224
Carg16430CmoCh12G008560Cucurbita moschata (Rifu)carcmoB1223
Carg16430Lsi11G006910Bottle gourd (USVL1VR-Ls)carlsiB829
Carg16430Cp4.1LG11g08370Cucurbita pepo (Zucchini)carcpeB1260
Carg16430Cp4.1LG07g07080Cucurbita pepo (Zucchini)carcpeB1263
Carg16430CsGy2G005390Cucumber (Gy14) v2carcgybB0902
Carg16430MELO3C004126.2Melon (DHL92) v3.6.1carmedB0908
Carg16430CsaV3_2G007600Cucumber (Chinese Long) v3carcucB0952
Carg16430Cla97C02G040160Watermelon (97103) v2carwmbB0955
Carg16430Bhi06G001222Wax gourdcarwgoB1054
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg16430Carg11966Silver-seed gourdcarcarB523
The following block(s) are covering this gene:
GeneOrganismBlock
Carg16430Silver-seed gourdcarcarB493
Carg16430Cucumber (Gy14) v2carcgybB0901
Carg16430Cucurbita maxima (Rimu)carcmaB1253
Carg16430Wild cucumber (PI 183967)carcpiB0951
Carg16430Cucumber (Chinese Long) v3carcucB0951
Carg16430Melon (DHL92) v3.5.1carmeB0898
Carg16430Melon (DHL92) v3.6.1carmedB0907
Carg16430Watermelon (Charleston Gray)carwcgB0892
Carg16430Watermelon (97103) v1carwmB0912
Carg16430Watermelon (97103) v1carwmB0915
Carg16430Watermelon (97103) v2carwmbB0959