Cla020020 (gene) Watermelon (97103) v1

Overview
NameCla020020
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionF-box/LRR-repeat protein (AHRD V1 ***- F1L4H8_ASCSU); contains Interpro domain(s) IPR006553 Leucine-rich repeat, cysteine-containing subtype
LocationChr2 : 24792143 .. 24793818 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGCACCGCGCCGCCACCGACTCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGCCCCCACCGAGTCTCCGGCCTGGTGGTCGCCGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCATTATTCGGATCAGACACTGCTCCGATTCATCTCTCGACCTCGTCGCTCAAGGGTAATTAAATTAATTTTTTTTCCCCTTGAAATTTTAATTCTTTTTGGTTGGGAAAAAAAATGGAGCTTTATTGCTTGATTAGGGTAGAAGATTTAATTTTTCCCCATTTTTTCTGTTTAGCAAGCACTTTGTTTGTGAATTTTATGATTAAGTTAATTAAGCACTATCACTTGATCTTTGCATCTGTTTTCATCAATCAATGTGCAATTTTTTAGAATAAAAATTGTTGGATTCCTCATTCAAGATGAGTTTTGGGATGGGATGAATGTGGAAATCCTAATTGGCTAGGTATGTACCTTATAGAAAGGATTTCTTGTTTTGGAAACATCATTTGCTTTATTCTCTTGGTTGATCCTTTTCTTGTTAGTTGGATATGCAAAAGTATAGGGATTGGTTGTTTTAATGAACACTATTGGGTTTTAAGCAGCTTGTTTTGAATTTGGTTATGTTTGCATAAGTGAAATTCTTTATAAAAATTTGGCTGTAATTTTAAGAGGGTTGAATCGATCCACCGTGGATCATCTCAATTGCAAAAAGAGCAAATTCTAAGGGTATGTTTGGATTGAGATTTTAAGTGCTTAAAAAAAATGTTTTTAGACACTTAAATCTAAATAGTTGATGAGGTTGGGCTTTGGAACAACAATGGCTATAGAGTCGAGCATTTAGATTAGCTGAGATGTGTAAGCTGGCATGAACTCTAGAGATTATCAAAAAGGGAAAAGGAATGGCTAAAATTGATGGTCTTCAACTTACTCACGTTTTAGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAACATTACCGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCGAACATATCGTTGGCATTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTTCTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTTCCTGACAATTATCTAAATTCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGCCCAACTTGGAGCACCTTGAACTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAAACTCAAGTACTTGGATCTGTTTGGGTGTGTGAGTTTGACAAGCCGTGATATAGCAAATGCTACATCAAGTCTGCAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACGGAGAGATATGGCCATTGGAGGTTGTATGATGAGAGATTCCAAACAGATATTTTCCGAATTTGA

mRNA sequence

ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGCACCGCGCCGCCACCGACTCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGCCCCCACCGAGTCTCCGGCCTGGTGGTCGCCGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCATTATTCGGATCAGACACTGCTCCGATTCATCTCTCGACCTCGTCGCTCAAGGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAACATTACCGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCGAACATATCGTTGGCATTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTTCTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTTCCTGACAATTATCTAAATTCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGCCCAACTTGGAGCACCTTGAACTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAAACTCAAGTACTTGGATCTGTTTGGGTGTGTGAGTTTGACAAGCCGTGATATAGCAAATGCTACATCAAGTCTGCAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACGGAGAGATATGGCCATTGGAGGTTGTATGATGAGAGATTCCAAACAGATATTTTCCGAATTTGA

Coding sequence (CDS)

ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTGACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGCCCCATGCTCGTCTGCAAGCTCTGGCACCGCGCCGCCACCGACTCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGCCCCCACCGAGTCTCCGGCCTGGTGGTCGCCGGAGTTCGAGACCAAGATCGATTCCATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCATTATTCGGATCAGACACTGCTCCGATTCATCTCTCGACCTCGTCGCTCAAGGGTGTCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAACATTACCGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCGAACATATCGTTGGCATTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTTCTTTAACAATCTAGATCCTTCCCAACACAAGGGAATTGTTCCTGACAATTATCTAAATTCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGCCCAACTTGGAGCACCTTGAACTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAAACTCAAGTACTTGGATCTGTTTGGGTGTGTGAGTTTGACAAGCCGTGATATAGCAAATGCTACATCAAGTCTGCAGAATTTGGAGATTAGGAAACCAAATTTCTATATTCCAAGGTCGGTCTTTCACACGGAGAGATATGGCCATTGGAGGTTGTATGATGAGAGATTCCAAACAGATATTTTCCGAATTTGA

Protein sequence

MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Homology
[Close]
BLAST of Cla020020 vs. Swiss-Prot
Match: SKIP1_ARATH (F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.0e-93
Identity = 175/300 (58.33%), Postives = 213/300 (71.00%), Query Frame = 1 

Query: 7   ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPT 66
           + S W  L  E L NI+SRLTI++ W GPM V K W     D  L+S FDLEP F+S P 
Sbjct: 4   DGSDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYP- 63

Query: 67  ESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSC 126
           ES   WSPEFE K+D MLRS V WS G L+ IR+RHCSD +L   A  CPNL+VL+I+S 
Sbjct: 64  ESTHLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQVLAIRSS 123

Query: 127 PNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQH 186
           PN+TD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  +    S+H
Sbjct: 124 PNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMIGRNCPNLRILKRNLMD--WSSRH 183

Query: 187 KGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDL 246
            G VP  YL++CPQD D+EA AI K M NLEHLE+ FS+LS K L+ ICEGCPKL+YLDL
Sbjct: 184 IGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFSRLSVKGLASICEGCPKLEYLDL 243

Query: 247 FGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI 304
           FGCV L+SRDI +  S L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Sbjct: 244 FGCVHLSSRDITSNVSRLKWLKEVKKPDVYVPRSGDVAQTERYGHWRLYDERFDIQAMRI 300

[Close]
BLAST of Cla020020 vs. Swiss-Prot
Match: FBL19_ARATH (Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana GN=FBL19 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-73
Identity = 147/281 (52.31%), Postives = 186/281 (66.19%), Query Frame = 1 

Query: 11  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPA 70
           W+ELT ECL +I SRL+ EQRW GPMLV K W  A  D +L + FDLE RF S P ES  
Sbjct: 20  WSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLETRFLSFP-ESIN 79

Query: 71  WWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNIT 130
           WW+PEFE K+DS LRS V  S G L+ IRIRHC++ SL   A+ CPNLEVL IK+CPN+T
Sbjct: 80  WWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLEVLWIKNCPNVT 139

Query: 131 DRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIV 190
           D SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + 
Sbjct: 140 DASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTIVA 199

Query: 191 PDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCV 250
           P +YL + P+  + EA  I K+M  L+HLE+ +S L+A+ L  +C+GC  L+Y+DL GC+
Sbjct: 200 PLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRGCI 259

Query: 251 SLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWR 291
           SLT  DI   TS L+NL EI KP+F  P +V    R G+ R
Sbjct: 260 SLTRSDINTNTSGLKNLTEIIKPDFNPPIAVLRVPRPGNPR 299

[Close]
BLAST of Cla020020 vs. Swiss-Prot
Match: FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.4e-24
Identity = 83/244 (34.02%), Postives = 119/244 (48.77%), Query Frame = 1 

Query: 10  SWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESP 69
           +WAEL  +  ++IL RL   +  +    VCK WHR   D S++   D++ R + A     
Sbjct: 180 NWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA---- 239

Query: 70  AWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDL-VAQGCPNLEVLSIKSCPN 129
                 F+  ++SM R AV  S G L  I I +   + L + +A    NL+ L +  C  
Sbjct: 240 ------FKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFP 299

Query: 130 ITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKG 189
           ITD  +AK       L  +++SYC   S  SL  IG+ CPN+KTLK N    +       
Sbjct: 300 ITDEGVAKAVSKVPLLEYLEVSYCL-FSGESLRDIGRSCPNLKTLKLNRAPEI------- 359

Query: 190 IVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFG 249
                + NS     D  A AIA+ MP L HL+L  + L+ K L+ I +GCP L++LDL  
Sbjct: 360 ----MFSNS---GFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQ 398

Query: 250 CVSL 253
           C ++
Sbjct: 420 CFNI 398


HSP 2 Score: 38.5 bits (88), Expect = 1.5e-01
Identity = 23/71 (32.39%), Postives = 34/71 (47.89%), Query Frame = 1 

Query: 203 DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATS 262
           D E  AIA+ MP L HL+L  + L+   L  I + C  L +LDL  C ++          
Sbjct: 19  DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRC 78

Query: 263 SLQNLEIRKPN 274
           S +  ++R+P+
Sbjct: 79  SERIRDLRRPD 89

[Close]
BLAST of Cla020020 vs. Swiss-Prot
Match: FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.8e-22
Identity = 80/255 (31.37%), Postives = 114/255 (44.71%), Query Frame = 1 

Query: 2   AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRF 61
           A  + E  +WAEL  E  ++IL RL   +  +    VCK W R   D S++   D+  + 
Sbjct: 12  AMKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKE 71

Query: 62  ESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSS-LDLVAQGCPNLEV 121
                      S E    I+ +   AV  S G L  I I +  ++S L+ +A    NL  
Sbjct: 72  NLVN-------SVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLRR 131

Query: 122 LSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNN 181
           L +  C  +  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N    
Sbjct: 132 LGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN---- 191

Query: 182 LDPSQHKGIVPDNYLNSCPQDV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEG 241
                            C  DV   D  A AIA+ MP L HL+L  + LS   L+ I EG
Sbjct: 192 -----------------CTGDVKCCDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEG 238

Query: 242 CPKLKYLDLFGCVSL 253
           CP LK L L  C+++
Sbjct: 252 CPHLKNLGLHQCLNI 238

[Close]
BLAST of Cla020020 vs. Swiss-Prot
Match: FBL4_ARATH (F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 9.9e-17
Identity = 54/183 (29.51%), Postives = 88/183 (48.09%), Query Frame = 1 

Query: 92  LGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISY 151
           L  L+++  +   +S+L  + +GC +LE+L +  C  I D +M  IA GC+ L+++ I  
Sbjct: 374 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 433

Query: 152 CHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGI-----VPDNYLNSCPQDVDSEA 211
           C+EI N  +  IGKHC ++  L   F + +       I     +    ++ C Q  D+  
Sbjct: 434 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGI 493

Query: 212 AAIAKFMPNLEHLELG-FSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANATSSLQ 269
            AIA+  P L HL++     +    L+ + EGCP LK L L  C  +T   + +     +
Sbjct: 494 TAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCK 553


HSP 2 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 49/184 (26.63%), Postives = 78/184 (42.39%), Query Frame = 1 

Query: 91  SLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDIS 150
           SL  L++   +H +D  +  + +G   L+ L++  C  ++ + +  IA GC++L  V+I+
Sbjct: 295 SLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEIN 354

Query: 151 YCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDVDSEAAAIA 210
            CH I    +  IGK CP +K L                     L  C +  +S    I 
Sbjct: 355 GCHNIGTRGIEAIGKSCPRLKELA--------------------LLYCQRIGNSALQEIG 414

Query: 211 KFMPNLEHLEL-GFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSR---DIANATSSLQN 270
           K   +LE L L   S +   A+  I +GC  LK L +  C  + ++    I     SL  
Sbjct: 415 KGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTE 458


HSP 3 Score: 60.8 bits (146), Expect = 2.9e-08
Identity = 47/169 (27.81%), Postives = 76/169 (44.97%), Query Frame = 1 

Query: 104 SDSSLDLVAQGCPNLEVLSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALI 163
           +D+ L  +A G P +E LS+  CPN++   +  +A  C  L+ +D+  C+ + +  LA +
Sbjct: 128 TDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCY-VGDQGLAAV 187

Query: 164 GKHCPNIKTLKRNFFNNLDPSQHKGIVPDNYLNSCPQDV------------DSEAAAIAK 223
           GK C  ++ L   F   L      G++  + +  C + +            D    A+  
Sbjct: 188 GKFCKQLEELNLRFCEGL---TDVGVI--DLVVGCSKSLKSIGVAASAKITDLSLEAVGS 247

Query: 224 FMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCVSLTSRDIANA 261
               LE L L    +  K L  + +GC +LK L L  CVS+T  D+A A
Sbjct: 248 HCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKL-QCVSVT--DVAFA 287

[Close]
BLAST of Cla020020 vs. TrEMBL
Match: A0A0A0LM72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036050 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.7e-156
Identity = 272/303 (89.77%), Postives = 284/303 (93.73%), Query Frame = 1 

Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPR 60
           MAEPS     WAELTHECLTNILSRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE R
Sbjct: 1   MAEPSP----WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60

Query: 61  FESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWW PEFETKIDSMLRSAV WSLGSLS+IRIRHCSDSSLDLVAQGCPNLEV
Sbjct: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120

Query: 121 LSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNN 180
           LSIKSC N+TDRSMAKIA GCQKLREVDISYCHEISN+SLALIG+HCPNIKTLKRNFFNN
Sbjct: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180

Query: 181 LDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPK 240
           LDPSQHKGIVPDNYL++ PQDVDSEAAAIAKFM NLE+LELGFSKLSAKAL+LICEGCP 
Sbjct: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240

Query: 241 LKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 300
           LKYLDLFGCV+LTSRDI NATSSL++LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 299

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 299

[Close]
BLAST of Cla020020 vs. TrEMBL
Match: A0A067KR56_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04049 PE=4 SV=1)

HSP 1 Score: 439.1 bits (1128), Expect = 4.3e-120
Identity = 214/294 (72.79%), Postives = 242/294 (82.31%), Query Frame = 1 

Query: 11  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPA 70
           W+ELTHECL NI++RLT+E RWRGPMLVCK W  A  D SL S FDL+  F+S+ TE   
Sbjct: 26  WSELTHECLINIIARLTLEHRWRGPMLVCKSWLNACKDCSLNSTFDLDALFDSS-TELSR 85

Query: 71  WWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNIT 130
           WW PEFE K+DSMLRS V WS GSL+ IR RHCSD +L  VA+ CPNLEVLSIKSCPN+T
Sbjct: 86  WWIPEFERKMDSMLRSVVAWSDGSLTEIRTRHCSDRALCFVAERCPNLEVLSIKSCPNVT 145

Query: 131 DRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIV 190
           D SMAK+A  C KL+EVDISYC+EIS+ SL +IG++CPN+K LKRNF N LDPSQH GIV
Sbjct: 146 DASMAKVAFKCTKLKEVDISYCYEISHESLVMIGRNCPNLKVLKRNFMNWLDPSQHMGIV 205

Query: 191 PDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCV 250
           PD YLN+CPQD DSEAAAIAK MP LEHLEL FSKLS+K L+ ICE C  L+YLDL GC 
Sbjct: 206 PDGYLNACPQDGDSEAAAIAKSMPQLEHLELRFSKLSSKGLASICEACLNLEYLDLCGCA 265

Query: 251 SLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 304
           +LTSRDI NATS L+NL EI+KPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 266 NLTSRDIINATSGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 318

[Close]
BLAST of Cla020020 vs. TrEMBL
Match: F6HYK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00430 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 9.6e-120
Identity = 212/300 (70.67%), Postives = 243/300 (81.00%), Query Frame = 1 

Query: 5   SSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESA 64
           S  +S W+ELTHECLTN+LSRLT+  RW GPMLVCK W  A  D SLFS  DLE  F+S 
Sbjct: 10  SELNSDWSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTLDLEVHFDS- 69

Query: 65  PTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIK 124
           PTES  WW+PEFE KID+MLRS   WS GS++ IR+RHCSD SL   A  C NLEVLSIK
Sbjct: 70  PTESARWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADRCSNLEVLSIK 129

Query: 125 SCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPS 184
           SCPN+TD SMA++A  C KLREVDISYC+EIS+ SL L+G++CPN+K LKRN  N LDPS
Sbjct: 130 SCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKILKRNLMNWLDPS 189

Query: 185 QHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYL 244
           QH GIVP+ YLN+CPQD DSEAAAI K MP+LEHLEL FSK+SAK L+LIC+GC  L+YL
Sbjct: 190 QHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLALICDGCLNLEYL 249

Query: 245 DLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 304
           DL GC +LTSRDIANATS+L+NL +I KPNFYIPRSVFH ERYGHWRLYD+RFQTD FRI
Sbjct: 250 DLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLYDDRFQTDTFRI 308

[Close]
BLAST of Cla020020 vs. TrEMBL
Match: A0A103XDR8_CYNCS (F-box domain, cyclin-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_025214 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 8.2e-119
Identity = 212/303 (69.97%), Postives = 242/303 (79.87%), Query Frame = 1 

Query: 2   AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRF 61
           A+ S   S WAELTHECL NIL+RLT E RWRG MLVCK W +A+ DSSL S FDLE  F
Sbjct: 12  ADDSGLYSGWAELTHECLLNILTRLTFEDRWRGAMLVCKSWLQASMDSSLHSVFDLESTF 71

Query: 62  ESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVL 121
            S P+ES  WW+P+FE K+D+MLRS V+WS G L+ IR+RHCSD SL LVAQ CPNLEVL
Sbjct: 72  HSRPSESVRWWTPQFERKVDNMLRSVVNWSDGGLTQIRVRHCSDRSLSLVAQRCPNLEVL 131

Query: 122 SIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNL 181
           SIKSCPN+TD SM  +A GC KLRE+DISYC+EIS+ SL ++G+ C  I TLKRN  N L
Sbjct: 132 SIKSCPNVTDESMVNLASGCPKLRELDISYCYEISHESLVMLGRKCTKIVTLKRNLMNWL 191

Query: 182 DPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKL 241
           DPSQH GIVP +YLN+CPQD DSE AAI  FMP L HLEL FSKLSAK L+L+ EGC  L
Sbjct: 192 DPSQHIGIVPTDYLNACPQDGDSEVAAIGHFMPQLLHLELRFSKLSAKGLALVSEGCKNL 251

Query: 242 KYLDLFGCVSLTSRDIANATSSLQNLE-IRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 301
           +YLDL GCV++TSRDIANA S+L  L+ I+KPNFYIPRSVFHTERYGHWRLYDERFQTD 
Sbjct: 252 EYLDLSGCVNVTSRDIANAASNLTKLKNIKKPNFYIPRSVFHTERYGHWRLYDERFQTDA 311

Query: 302 FRI 304
           FRI
Sbjct: 312 FRI 314

[Close]
BLAST of Cla020020 vs. TrEMBL
Match: A0A059CSD7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02501 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.4e-118
Identity = 208/300 (69.33%), Postives = 244/300 (81.33%), Query Frame = 1 

Query: 5   SSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESA 64
           S  S  WAELTHECLTN+LSRLT EQ W GPMLVCK W RA+ D SL + FDLE RFES+
Sbjct: 17  SGPSPDWAELTHECLTNVLSRLTAEQLWTGPMLVCKSWLRASADPSLHTAFDLEARFESS 76

Query: 65  PTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIK 124
             ES  WWSPEFE ++D+MLRSAV WS G L+ IR RHCSD +LDLVA+ CPNL+VLSIK
Sbjct: 77  -RESIGWWSPEFERRVDAMLRSAVGWSDGGLAAIRARHCSDRALDLVAERCPNLQVLSIK 136

Query: 125 SCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPS 184
           SC ++TD SMA+IA  C  LRE+DISYCHE+S++SL LIG++CPN+K LKRN  N LDPS
Sbjct: 137 SCQSVTDASMARIASCCTSLRELDISYCHEVSHVSLVLIGRNCPNLKVLKRNLINWLDPS 196

Query: 185 QHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYL 244
           QH G+VP  YLN+CPQ+ DSEAA I K+MP LEHLE+ FSKL+AK L+ IC GC  L +L
Sbjct: 197 QHVGVVPAEYLNACPQEGDSEAATIGKYMPQLEHLEIRFSKLTAKGLTSICNGCLDLMHL 256

Query: 245 DLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 304
           DL GC +LTSRDI NATS+L+NL +I KPNFYIPRSV+HTERYGHW+LYDERFQTD+FRI
Sbjct: 257 DLSGCANLTSRDIVNATSNLKNLQDIIKPNFYIPRSVYHTERYGHWQLYDERFQTDVFRI 315

[Close]
BLAST of Cla020020 vs. NCBI nr
Match: gi|659069973|ref|XP_008452697.1| (PREDICTED: F-box protein SKIP1 [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 1.3e-162
Identity = 279/303 (92.08%), Postives = 289/303 (95.38%), Query Frame = 1 

Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPR 60
           MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA D SLFSHFDLEPR
Sbjct: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKHWFRAARDPSLFSHFDLEPR 60

Query: 61  FESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+RHCSDSSLD VAQGCPNLEV
Sbjct: 61  FESAPTESPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRVRHCSDSSLDFVAQGCPNLEV 120

Query: 121 LSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNN 180
           LSIKSC N+TD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FNN
Sbjct: 121 LSIKSCANVTDSSMAKIAFGCQKLREVDISYCHEISNISLALIGRHCPNIKTLKRNYFNN 180

Query: 181 LDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPK 240
           LDPSQHKGIVPDNYL++CPQDVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCP 
Sbjct: 181 LDPSQHKGIVPDNYLDACPQDVDSEAAAIAKFMHNLEHLELGFSKLSAKALTSICEGCPN 240

Query: 241 LKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 300
           LKYLDLFGCV+LTSRDIANATSSL+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIANATSSLENLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 300

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 303

[Close]
BLAST of Cla020020 vs. NCBI nr
Match: gi|449453968|ref|XP_004144728.1| (PREDICTED: F-box protein SKIP1-like [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 5.4e-156
Identity = 272/303 (89.77%), Postives = 284/303 (93.73%), Query Frame = 1 

Query: 1   MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPR 60
           MAEPS     WAELTHECLTNILSRLT+EQRWRGPMLVCK W RAATD SLFSHFDLE R
Sbjct: 1   MAEPSP----WAELTHECLTNILSRLTMEQRWRGPMLVCKHWFRAATDPSLFSHFDLEKR 60

Query: 61  FESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEV 120
           FESAPTE PAWW PEFETKIDSMLRSAV WSLGSLS+IRIRHCSDSSLDLVAQGCPNLEV
Sbjct: 61  FESAPTELPAWWLPEFETKIDSMLRSAVRWSLGSLSVIRIRHCSDSSLDLVAQGCPNLEV 120

Query: 121 LSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNN 180
           LSIKSC N+TDRSMAKIA GCQKLREVDISYCHEISN+SLALIG+HCPNIKTLKRNFFNN
Sbjct: 121 LSIKSCANVTDRSMAKIAFGCQKLREVDISYCHEISNVSLALIGRHCPNIKTLKRNFFNN 180

Query: 181 LDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPK 240
           LDPSQHKGIVPDNYL++ PQDVDSEAAAIAKFM NLE+LELGFSKLSAKAL+LICEGCP 
Sbjct: 181 LDPSQHKGIVPDNYLDARPQDVDSEAAAIAKFMHNLEYLELGFSKLSAKALTLICEGCPN 240

Query: 241 LKYLDLFGCVSLTSRDIANATSSLQNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI 300
           LKYLDLFGCV+LTSRDI NATSSL++LEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Sbjct: 241 LKYLDLFGCVNLTSRDIMNATSSLEHLEIRKPNFYIPRSVFHTERYDHWRLYDERFQTDI 299

Query: 301 FRI 304
           FRI
Sbjct: 301 FRI 299

[Close]
BLAST of Cla020020 vs. NCBI nr
Match: gi|802592335|ref|XP_012071528.1| (PREDICTED: F-box protein SKIP1-like [Jatropha curcas])

HSP 1 Score: 439.1 bits (1128), Expect = 6.2e-120
Identity = 214/294 (72.79%), Postives = 242/294 (82.31%), Query Frame = 1 

Query: 11  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESAPTESPA 70
           W+ELTHECL NI++RLT+E RWRGPMLVCK W  A  D SL S FDL+  F+S+ TE   
Sbjct: 26  WSELTHECLINIIARLTLEHRWRGPMLVCKSWLNACKDCSLNSTFDLDALFDSS-TELSR 85

Query: 71  WWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIKSCPNIT 130
           WW PEFE K+DSMLRS V WS GSL+ IR RHCSD +L  VA+ CPNLEVLSIKSCPN+T
Sbjct: 86  WWIPEFERKMDSMLRSVVAWSDGSLTEIRTRHCSDRALCFVAERCPNLEVLSIKSCPNVT 145

Query: 131 DRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPSQHKGIV 190
           D SMAK+A  C KL+EVDISYC+EIS+ SL +IG++CPN+K LKRNF N LDPSQH GIV
Sbjct: 146 DASMAKVAFKCTKLKEVDISYCYEISHESLVMIGRNCPNLKVLKRNFMNWLDPSQHMGIV 205

Query: 191 PDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYLDLFGCV 250
           PD YLN+CPQD DSEAAAIAK MP LEHLEL FSKLS+K L+ ICE C  L+YLDL GC 
Sbjct: 206 PDGYLNACPQDGDSEAAAIAKSMPQLEHLELRFSKLSSKGLASICEACLNLEYLDLCGCA 265

Query: 251 SLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 304
           +LTSRDI NATS L+NL EI+KPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Sbjct: 266 NLTSRDIINATSGLKNLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI 318

[Close]
BLAST of Cla020020 vs. NCBI nr
Match: gi|1012001816|ref|XP_015933019.1| (PREDICTED: F-box protein SKIP1 [Arachis duranensis])

HSP 1 Score: 438.3 bits (1126), Expect = 1.1e-119
Identity = 214/304 (70.39%), Postives = 251/304 (82.57%), Query Frame = 1 

Query: 3   EPSSESSS--WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPR 62
           E SSES    WAELTHECLTNI SRLTI+ RWRG MLVCK W RA  D SL + F+L+P+
Sbjct: 7   EQSSESGGPDWAELTHECLTNIFSRLTIQDRWRGTMLVCKSWLRAFKDPSLHTIFNLDPQ 66

Query: 63  FESAPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEV 122
           F+  P E P WW+P+FE KIDSML S V WS GSL+ IR+RHCSD SL LVA+ CPNLEV
Sbjct: 67  FDPPP-ELPIWWAPDFERKIDSMLSSVVRWSHGSLTEIRVRHCSDRSLALVAESCPNLEV 126

Query: 123 LSIKSCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNN 182
           LSI+SCP++TD S+++IAL C KLRE+D+SYC+EIS++SLAL+GK+CPN+K LKRN  N 
Sbjct: 127 LSIRSCPHVTDDSISRIALRCPKLRELDVSYCYEISHVSLALVGKNCPNLKVLKRNLMNW 186

Query: 183 LDPSQHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPK 242
           LDPSQH GIVP+ YLN+CPQD +SEAAAIA  MP+LE LE+ FSKLSAK LSLICE C  
Sbjct: 187 LDPSQHIGIVPNEYLNACPQDGESEAAAIANSMPHLESLEIRFSKLSAKGLSLICERCSN 246

Query: 243 LKYLDLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTD 302
           L++LDL GC +LTSRDI NAT +L +L EI+KPNFYIPRSVFHTERYGHWRLYDERFQTD
Sbjct: 247 LEFLDLSGCANLTSRDIVNATPNLAHLKEIKKPNFYIPRSVFHTERYGHWRLYDERFQTD 306

Query: 303 IFRI 304
           +FRI
Sbjct: 307 VFRI 309

[Close]
BLAST of Cla020020 vs. NCBI nr
Match: gi|225445832|ref|XP_002277519.1| (PREDICTED: F-box protein SKIP1 [Vitis vinifera])

HSP 1 Score: 438.0 bits (1125), Expect = 1.4e-119
Identity = 212/300 (70.67%), Postives = 243/300 (81.00%), Query Frame = 1 

Query: 5   SSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDSSLFSHFDLEPRFESA 64
           S  +S W+ELTHECLTN+LSRLT+  RW GPMLVCK W  A  D SLFS  DLE  F+S 
Sbjct: 10  SELNSDWSELTHECLTNVLSRLTLHDRWTGPMLVCKSWLHACKDPSLFSTLDLEVHFDS- 69

Query: 65  PTESPAWWSPEFETKIDSMLRSAVHWSLGSLSIIRIRHCSDSSLDLVAQGCPNLEVLSIK 124
           PTES  WW+PEFE KID+MLRS   WS GS++ IR+RHCSD SL   A  C NLEVLSIK
Sbjct: 70  PTESARWWTPEFERKIDAMLRSIAEWSGGSITEIRVRHCSDRSLSFAADRCSNLEVLSIK 129

Query: 125 SCPNITDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNNLDPS 184
           SCPN+TD SMA++A  C KLREVDISYC+EIS+ SL L+G++CPN+K LKRN  N LDPS
Sbjct: 130 SCPNVTDASMARVAFRCLKLREVDISYCYEISHESLILLGRNCPNLKILKRNLMNWLDPS 189

Query: 185 QHKGIVPDNYLNSCPQDVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPKLKYL 244
           QH GIVP+ YLN+CPQD DSEAAAI K MP+LEHLEL FSK+SAK L+LIC+GC  L+YL
Sbjct: 190 QHIGIVPNEYLNACPQDGDSEAAAIGKTMPHLEHLELRFSKISAKGLALICDGCLNLEYL 249

Query: 245 DLFGCVSLTSRDIANATSSLQNL-EIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI 304
           DL GC +LTSRDIANATS+L+NL +I KPNFYIPRSVFH ERYGHWRLYD+RFQTD FRI
Sbjct: 250 DLSGCANLTSRDIANATSNLKNLKKIEKPNFYIPRSVFHAERYGHWRLYDDRFQTDTFRI 308

The following BLAST results are available for this feature:
BLAST of Cla020020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKIP1_ARATH1.0e-9358.33F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1[more]
FBL19_ARATH2.0e-7352.31Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana GN=FBL19 PE=4 SV=1[more]
FBL23_ARATH6.4e-2434.02Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana GN=FBL23 PE=3 SV=1[more]
FBL9_ARATH7.8e-2231.37Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9 PE=3 SV=1[more]
FBL4_ARATH9.9e-1729.51F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2 SV=1[more]
BLAST of Cla020020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LM72_CUCSA3.7e-15689.77Uncharacterized protein OS=Cucumis sativus GN=Csa_2G036050 PE=4 SV=1[more]
A0A067KR56_JATCU4.3e-12072.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04049 PE=4 SV=1[more]
F6HYK3_VITVI9.6e-12070.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00430 PE=4 SV=... [more]
A0A103XDR8_CYNCS8.2e-11969.97F-box domain, cyclin-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_02... [more]
A0A059CSD7_EUCGR2.4e-11869.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02501 PE=4 SV=1[more]
BLAST of Cla020020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069973|ref|XP_008452697.1|1.3e-16292.08PREDICTED: F-box protein SKIP1 [Cucumis melo][more]
gi|449453968|ref|XP_004144728.1|5.4e-15689.77PREDICTED: F-box protein SKIP1-like [Cucumis sativus][more]
gi|802592335|ref|XP_012071528.1|6.2e-12072.79PREDICTED: F-box protein SKIP1-like [Jatropha curcas][more]
gi|1012001816|ref|XP_015933019.1|1.1e-11970.39PREDICTED: F-box protein SKIP1 [Arachis duranensis][more]
gi|225445832|ref|XP_002277519.1|1.4e-11970.67PREDICTED: F-box protein SKIP1 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR001810F-box_dom
IPR006553Leu-rich_rpt_Cys-con_subtyp
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0061630 ubiquitin protein ligase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU60771watermelon EST collection version 2.0transcribed_cluster
WMU79576watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020020Cla020020.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU79576WMU79576transcribed_cluster
WMU60771WMU60771transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 141..157
score: 0.66coord: 115..138
score:
IPR001810F-box domainunknownSSF81383F-box domaincoord: 2..66
score: 1.2
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 115..140
score: 1.6E-5coord: 213..237
score: 400.0coord: 238..263
score: 0.29coord: 141..166
score: 0.
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 1..269
score: 2.5
NoneNo IPR availableunknownSSF52047RNI-likecoord: 84..267
score: 4.19