CsaV3_2G007390 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTCTCTCTTTCTCTTTAAACCTATAATTAATCAATCTCAATTATCTTCATAAATATCTCAATTTAATTACTTCACTTTTTTCCATCATGATTTTATTATATATATAAAACATTTTTTGTTTTATAATTTTGCCACAAAAAATAAATAAATAATAAAGTTGGATTTTGGAATTGGGAGAGGAAGTTCATAATGGGAAGGCACTCTTGTTGTTACAAGCAAAAGCTAAGGAAAGGGCTTTGGTCACCTGAGGAAGATGAAAAGCTTCATAACTATATCACCATTCATGGCCATGGCTGTTGGAGTTCTGTCCCTAAACTTGCAGGTTATTTTCTTCTTCTTTTTTCCCATTTCCCCCTTTCTCTTCTTCTCTTTCATTTTAATCCCTTTCTTCTCAGTTTGGTTTGAGAATTATCAAACCTTTGGATCTCAAAAGAAATTTATTTGTTTTTTTTTTTTTGAATTTTATAGGGTTGCAAAGGTGTGGAAAAAGTTGTAGATTAAGATGGATCAATTACCTTAGGCCAGATTTGAAGAGAGGTCCCTTCTCACAACAAGAAGAAGATTTAATCATTGAGCTCCATTCAGTTCTAGGCAACAGGTAAATTTGTTAACTCAATTATGAGACACATTTGTTTTTGTTTAAAGGGGTACCTCAAACAAAAAAGTCTTTTAGCTTTTATGGGTTTAGGGTAAATTAATTATGTACTCTCCCTTCTTTCTTCAGTACTCTCTCTTGTTGTAATTCTTTATTTTGTGGCCATGTTTAATGTATTTTACCAAATCAGATGGTCACAAATTGCTGCTCAATTACCTGGAAGAACCGACAACGAGATTAAGAATCTATGGAATTCGTGTATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCCAACACTCACAAGCCTCTCATAGAGAAAGAAATTATCAACAATAGTGACAATAACGACAACATTATTATCACATCAGATGATAAAAAAAGCCATGAAAAAACTTTCCCAATTGAAGAAGTAGTTCCTCCAACCAATTCAACAACAACAACTACAACAAGAAAATCCATTGAAAGCTGTTTCGACATGTCGACCACTACTACTTCTACTACTTCTTGTAATTTCTCAAACTTTCACCAGTTGAACGATGGATCGAGTCACATGGATCTCCCTATAATCCAAAACAATAACACTAATAATGCCAGTACTCCTTTTGAGGCTGCCATTTCAAATTTGTTTTTCCCATCTCCAAATTCATGTGGTGTAGCTCATGTGAGACCCTCTATTAATCTTATTCCTTCTGAAAACAATCCTTCTTCTACTGTAAGTTCTACTTCTGAAGTAGTAGCTCATAACAACAACAACAACAATAATGGCTTCTTGTGGCACTCAGACGACCAGTTTCTTCAAACAGCTTCAATTCTCATGAGAAACGATTGGCATCATCATCAAATCAATCACCGCCACACGACCCTTCAAGCTGAAATACTAGGGCAACCAACTTTCCCAAAATACTAGTCAAATGGTCTCATACCAATGAAAATGTGTTGTCTTTTACTTATATATACAGTACATTTTTTCTATGATATGTGACATTCTTCGTCTTCTCGAGATAAACCCCTTCGATTAATTAGGCTTTGAAGATACTCATATATTACATGGAAGAGTATAGTTGACATGAGCCACTTTTGAAGATGTGTAAATTTTTCTAAAGATATGAAATTTGTTTTCTATTTATTGTTAGTATATACATTTTGTTTGACAATATAATATGTGGGACGAATATGAAGATTTGAACCTATCATCTAGCTACGCTACTCTTTCATTCAAGTTGTAATCTA ATGGGAAGGCACTCTTGTTGTTACAAGCAAAAGCTAAGGAAAGGGCTTTGGTCACCTGAGGAAGATGAAAAGCTTCATAACTATATCACCATTCATGGCCATGGCTGTTGGAGTTCTGTCCCTAAACTTGCAGGGTTGCAAAGGTGTGGAAAAAGTTGTAGATTAAGATGGATCAATTACCTTAGGCCAGATTTGAAGAGAGGTCCCTTCTCACAACAAGAAGAAGATTTAATCATTGAGCTCCATTCAGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAATTACCTGGAAGAACCGACAACGAGATTAAGAATCTATGGAATTCGTGTATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCCAACACTCACAAGCCTCTCATAGAGAAAGAAATTATCAACAATAGTGACAATAACGACAACATTATTATCACATCAGATGATAAAAAAAGCCATGAAAAAACTTTCCCAATTGAAGAAGTAGTTCCTCCAACCAATTCAACAACAACAACTACAACAAGAAAATCCATTGAAAGCTGTTTCGACATGTCGACCACTACTACTTCTACTACTTCTTGTAATTTCTCAAACTTTCACCAGTTGAACGATGGATCGAGTCACATGGATCTCCCTATAATCCAAAACAATAACACTAATAATGCCAGTACTCCTTTTGAGGCTGCCATTTCAAATTTGTTTTTCCCATCTCCAAATTCATGTGGTGTAGCTCATGTGAGACCCTCTATTAATCTTATTCCTTCTGAAAACAATCCTTCTTCTACTGTAAGTTCTACTTCTGAAGTAGTAGCTCATAACAACAACAACAACAATAATGGCTTCTTGTGGCACTCAGACGACCAGTTTCTTCAAACAGCTTCAATTCTCATGAGAAACGATTGGCATCATCATCAAATCAATCACCGCCACACGACCCTTCAAGCTGAAATACTAGGGCAACCAACTTTCCCAAAATACTAG ATGGGAAGGCACTCTTGTTGTTACAAGCAAAAGCTAAGGAAAGGGCTTTGGTCACCTGAGGAAGATGAAAAGCTTCATAACTATATCACCATTCATGGCCATGGCTGTTGGAGTTCTGTCCCTAAACTTGCAGGGTTGCAAAGGTGTGGAAAAAGTTGTAGATTAAGATGGATCAATTACCTTAGGCCAGATTTGAAGAGAGGTCCCTTCTCACAACAAGAAGAAGATTTAATCATTGAGCTCCATTCAGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAATTACCTGGAAGAACCGACAACGAGATTAAGAATCTATGGAATTCGTGTATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCCAACACTCACAAGCCTCTCATAGAGAAAGAAATTATCAACAATAGTGACAATAACGACAACATTATTATCACATCAGATGATAAAAAAAGCCATGAAAAAACTTTCCCAATTGAAGAAGTAGTTCCTCCAACCAATTCAACAACAACAACTACAACAAGAAAATCCATTGAAAGCTGTTTCGACATGTCGACCACTACTACTTCTACTACTTCTTGTAATTTCTCAAACTTTCACCAGTTGAACGATGGATCGAGTCACATGGATCTCCCTATAATCCAAAACAATAACACTAATAATGCCAGTACTCCTTTTGAGGCTGCCATTTCAAATTTGTTTTTCCCATCTCCAAATTCATGTGGTGTAGCTCATGTGAGACCCTCTATTAATCTTATTCCTTCTGAAAACAATCCTTCTTCTACTGTAAGTTCTACTTCTGAAGTAGTAGCTCATAACAACAACAACAACAATAATGGCTTCTTGTGGCACTCAGACGACCAGTTTCTTCAAACAGCTTCAATTCTCATGAGAAACGATTGGCATCATCATCAAATCAATCACCGCCACACGACCCTTCAAGCTGAAATACTAGGGCAACCAACTTTCCCAAAATACTAG MGRHSCCYKQKLRKGLWSPEEDEKLHNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKPLIEKEIINNSDNNDNIIITSDDKKSHEKTFPIEEVVPPTNSTTTTTTRKSIESCFDMSTTTTSTTSCNFSNFHQLNDGSSHMDLPIIQNNNTNNASTPFEAAISNLFFPSPNSCGVAHVRPSINLIPSENNPSSTVSSTSEVVAHNNNNNNNGFLWHSDDQFLQTASILMRNDWHHHQINHRHTTLQAEILGQPTFPKY
BLAST of CsaV3_2G007390 vs. NCBI nr
Match: XP_004144800.1 (PREDICTED: transcription factor MYB86-like [Cucumis sativus]) HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. NCBI nr
Match: XP_008453024.1 (PREDICTED: transcription factor MYB86-like [Cucumis melo]) HSP 1 Score: 397.9 bits (1021), Expect = 3.3e-107 Identity = 281/329 (85.41%), Postives = 286/329 (86.93%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. NCBI nr
Match: KGN61035.1 (hypothetical protein Csa_2G035350 [Cucumis sativus]) HSP 1 Score: 331.3 bits (848), Expect = 3.8e-87 Identity = 288/327 (88.07%), Postives = 290/327 (88.69%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. NCBI nr
Match: XP_022156353.1 (transcription factor MYB61-like [Momordica charantia]) HSP 1 Score: 327.4 bits (838), Expect = 5.5e-86 Identity = 184/329 (55.93%), Postives = 195/329 (59.27%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. NCBI nr
Match: XP_022937953.1 (transcription factor MYB86-like [Cucurbita moschata]) HSP 1 Score: 311.2 bits (796), Expect = 4.1e-81 Identity = 177/328 (53.96%), Postives = 187/328 (57.01%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TAIR10
Match: AT5G26660.1 (myb domain protein 86) HSP 1 Score: 261.2 bits (666), Expect = 8.9e-70 Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TAIR10
Match: AT1G09540.1 (myb domain protein 61) HSP 1 Score: 259.6 bits (662), Expect = 2.6e-69 Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TAIR10
Match: AT1G57560.1 (myb domain protein 50) HSP 1 Score: 257.3 bits (656), Expect = 1.3e-68 Identity = 115/131 (87.79%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TAIR10
Match: AT4G01680.2 (myb domain protein 55) HSP 1 Score: 245.4 bits (625), Expect = 5.0e-65 Identity = 116/145 (80.00%), Postives = 122/145 (84.14%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TAIR10
Match: AT3G12720.1 (myb domain protein 67) HSP 1 Score: 215.7 bits (548), Expect = 4.3e-56 Identity = 90/123 (73.17%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. Swiss-Prot
Match: sp|Q8LPH6|MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.6e-68 Identity = 116/133 (87.22%), Postives = 122/133 (91.73%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. Swiss-Prot
Match: sp|Q8VZQ2|MYB61_ARATH (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 4.6e-68 Identity = 116/133 (87.22%), Postives = 125/133 (93.98%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. Swiss-Prot
Match: sp|P20027|MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3) HSP 1 Score: 220.7 bits (561), Expect = 2.4e-56 Identity = 101/131 (77.10%), Postives = 112/131 (85.50%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. Swiss-Prot
Match: sp|O49608|MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=2 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 8.0e-52 Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. Swiss-Prot
Match: sp|P80073|MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens OX=3218 GN=PP2 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 8.8e-51 Identity = 88/129 (68.22%), Postives = 108/129 (83.72%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TrEMBL
Match: tr|A0A1S3BV70|A0A1S3BV70_CUCME (transcription factor MYB86-like OS=Cucumis melo OX=3656 GN=LOC103493851 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 2.2e-107 Identity = 281/329 (85.41%), Postives = 286/329 (86.93%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TrEMBL
Match: tr|A0A0A0LGL1|A0A0A0LGL1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035350 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 2.5e-87 Identity = 288/327 (88.07%), Postives = 290/327 (88.69%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TrEMBL
Match: tr|A0A2P5DRA4|A0A2P5DRA4_9ROSA (MYB transcription factor OS=Trema orientalis OX=63057 GN=TorMYB58 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71 Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TrEMBL
Match: tr|A0A2P5D8D5|A0A2P5D8D5_PARAD (MYB transcription factor OS=Parasponia andersonii OX=3476 GN=PanMYB58 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.6e-71 Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of CsaV3_2G007390 vs. TrEMBL
Match: tr|A0A1S3BNQ4|A0A1S3BNQ4_CUCME (transcription factor MYB86 OS=Cucumis melo OX=3656 GN=LOC103492084 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.3e-71 Identity = 124/130 (95.38%), Postives = 128/130 (98.46%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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