CmaCh05G010520 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGAGGCATTATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGTCATATTCCCATATCCTTTCTTTATCTCTTTTAGCTTCTCTCTCTTCTCTTTTCTCTCTCTCTCTCGATCGAAAAAGAGAGAGAATTGGATAAGTTTTGGTTCGGGAATTCGAACTTTTGATTTCAAAAGAATGTACATATGTCTTCACAGTTCTAGGTTGTGAGGAGAGAGAGAGAACTTTTTTCTTTTTCTAAGGACGAAATGGAAAAAGGTTAACTTTTACGAGAACCCTTTTGGATCCACAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGGTTTGTTCTTCCATCTTCATTCTCGTTCTTAGTTTCGAACTCCGTTTAACCTATATTACCCACTCAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAAACCTTCACACGTACCCATGAAAATGTTGTCGTCCTCATTCCTGAGATAAACTCGTTAATCAATCAGAGTTTGAAGATACTCGTACAGTCGACCTGAGCTATATCTGAAAGTGTGTAAAGCTCTCGTCGTTATCTATTATAATTATTTTTTTGAATTTGATAATATGTGAGACGGAGATTTGAAATTATAATATCATAACTATCTGAATTGTGTTCATGTTCGCAATGGATCGATA GGAGGAGGCATTATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAAACCTTCACACGTACCCATGAAAATGTTGTCGTCCTCATTCCTGAGATAAACTCGTTAATCAATCAGAGTTTGAAGATACTCGTACAGTCGACCTGAGCTATATCTGAAAGTGTGTAAAGCTCTCGTCGTTATCTATTATAATTATTTTTTTGAATTTGATAATATGTGAGACGGAGATTTGAAATTATAATATCATAACTATCTGAATTGTGTTCATGTTCGCAATGGATCGATA ATGGGAAGACACTCTTGTTGTTTCAAGCAGAAGCTGAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAGCTTCTTAACTATATCACCAAACATGGCCATGGCTGTTGGAGCACTGTCCCTAAACTTGCAGGCTTGCAAAGGTGTGGAAAGAGCTGTCGATTAAGATGGATCAATTACCTTAGACCAAATTTGAAAAGAGGCCCGTTCTCACAACAGGAAGAAGACTTGATCGTTGAGCTCCATTCAATTCTAGGCAACAGATGGTCACAAATTGCTGCTCAGCTACCAGGAAGAACAGATAACGAGATAAAAAATCTATGGAATTCGTGCATTAAAAAGAAGTTGAAGCAAAAAGGCATCGACCCAAACACTCACAAGCCTTATCTAGACGAAGAAACCAACAATAATGGGAAGAACAACAGCCTTATCATCACATCAAATGATCAAAAAAGCCATGAAAAAGCTTCCCCAATTCAAAGTCCAGACATGTCCACCACTACTTTTGAGGCCTTTTCAAATTTATTCTCCCCAGCTCTCAATTCATGTGCTGTAGCTCCAAGTTCTACTTCTCAAGTTGTTCATAATAGCAACAACAATGGCTTCTTATGGCAGCCAGATGAGTTTCTTTCCGCTCCCTCCGAGCTCATGAGAAGTGATTGGCATCGCCACCCGACCCTCCAACCCGAACTCTTTTGGATCTAA MGRHSCCFKQKLRKGLWSPEEDEKLLNYITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYLRPNLKRGPFSQQEEDLIVELHSILGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKPYLDEETNNNGKNNSLIITSNDQKSHEKASPIQSPDMSTTTFEAFSNLFSPALNSCAVAPSSTSQVVHNSNNNGFLWQPDEFLSAPSELMRSDWHRHPTLQPELFWI
BLAST of CmaCh05G010520 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.6e-67 Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 1
BLAST of CmaCh05G010520 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 219.2 bits (557), Expect = 4.9e-56 Identity = 102/136 (75.00%), Postives = 113/136 (83.09%), Query Frame = 1
BLAST of CmaCh05G010520 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 4.3e-52 Identity = 93/125 (74.40%), Postives = 103/125 (82.40%), Query Frame = 1
BLAST of CmaCh05G010520 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.6e-51 Identity = 87/142 (61.27%), Postives = 114/142 (80.28%), Query Frame = 1
BLAST of CmaCh05G010520 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 4.7e-51 Identity = 97/190 (51.05%), Postives = 132/190 (69.47%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TrEMBL
Match: M5W530_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019718mg PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 145/203 (71.43%), Postives = 170/203 (83.74%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TrEMBL
Match: D9ZJ65_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 5.8e-72 Identity = 145/211 (68.72%), Postives = 165/211 (78.20%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TrEMBL
Match: A0A067JTK3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_23158 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 9.9e-72 Identity = 135/200 (67.50%), Postives = 158/200 (79.00%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TrEMBL
Match: G7IAD1_MEDTR (Myb transcription factor OS=Medicago truncatula GN=MTR_1g085040 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.1e-70 Identity = 138/214 (64.49%), Postives = 171/214 (79.91%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TrEMBL
Match: V7CYN5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G221500g PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.4e-70 Identity = 129/200 (64.50%), Postives = 158/200 (79.00%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TAIR10
Match: AT1G57560.1 (AT1G57560.1 myb domain protein 50) HSP 1 Score: 260.8 bits (665), Expect = 8.2e-70 Identity = 119/149 (79.87%), Postives = 134/149 (89.93%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86) HSP 1 Score: 257.3 bits (656), Expect = 9.1e-69 Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TAIR10
Match: AT1G09540.1 (AT1G09540.1 myb domain protein 61) HSP 1 Score: 255.0 bits (650), Expect = 4.5e-68 Identity = 122/172 (70.93%), Postives = 145/172 (84.30%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55) HSP 1 Score: 241.9 bits (616), Expect = 4.0e-64 Identity = 121/186 (65.05%), Postives = 136/186 (73.12%), Query Frame = 1
BLAST of CmaCh05G010520 vs. TAIR10
Match: AT3G12720.1 (AT3G12720.1 myb domain protein 67) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-56 Identity = 102/178 (57.30%), Postives = 133/178 (74.72%), Query Frame = 1
BLAST of CmaCh05G010520 vs. NCBI nr
Match: gi|659070035|ref|XP_008453024.1| (PREDICTED: transcription factor MYB86-like [Cucumis melo]) HSP 1 Score: 307.0 bits (785), Expect = 2.8e-80 Identity = 145/179 (81.01%), Postives = 161/179 (89.94%), Query Frame = 1
BLAST of CmaCh05G010520 vs. NCBI nr
Match: gi|449454113|ref|XP_004144800.1| (PREDICTED: transcription factor MYB86-like [Cucumis sativus]) HSP 1 Score: 302.8 bits (774), Expect = 5.4e-79 Identity = 143/172 (83.14%), Postives = 156/172 (90.70%), Query Frame = 1
BLAST of CmaCh05G010520 vs. NCBI nr
Match: gi|694379671|ref|XP_009366014.1| (PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri]) HSP 1 Score: 282.0 bits (720), Expect = 9.8e-73 Identity = 146/211 (69.19%), Postives = 166/211 (78.67%), Query Frame = 1
BLAST of CmaCh05G010520 vs. NCBI nr
Match: gi|470132921|ref|XP_004302323.1| (PREDICTED: transcription factor MYB86 [Fragaria vesca subsp. vesca]) HSP 1 Score: 281.2 bits (718), Expect = 1.7e-72 Identity = 136/201 (67.66%), Postives = 166/201 (82.59%), Query Frame = 1
BLAST of CmaCh05G010520 vs. NCBI nr
Match: gi|595838238|ref|XP_007207615.1| (hypothetical protein PRUPE_ppa019718mg [Prunus persica]) HSP 1 Score: 281.2 bits (718), Expect = 1.7e-72 Identity = 145/203 (71.43%), Postives = 170/203 (83.74%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|