CmaCh12G008660 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G008660
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMyb domain protein 55
LocationCma_Chr12 : 6448322 .. 6449364 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATATTTGCCCATAAAAATTAAAGGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGTACTCTTGCTGTTACAAGCAGAAGCTTAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTTCTTAACCATATCACCAAACATGGCCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGTAATTGGCTTTTCATCCTCTTGCCTCAAATCGATTCAAAAAAGTTACAAGATTCGAGATTAAGTTCTCTAATTTCGAGGAAGAAAAGAAAGAAAGTAAGAAAACGTTAACTTTTTAACACGACCCGTATGGATCTTTAGGGTTGCAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATCAATTATCTAAAGCCAGATTTGAAAAGAGGCCCGTTCTCGCAACCAGAAGAAGATTTAATCATTGAGCTTCATTCCGTTTTAGGCAACAGGTTTGTTTTCCCTCCTTAGTTCTTCCCTTTAGTTTTTGATTCGTGACTTGTTTTATAACATATTATTCGTTTAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAATCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTACGTAGACAAAGAAATCAGCAATGAAAACAACAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAACCATTCAAGTTCCGACATGTCGACCACTACCGACAAATCGGAGAACATGGGTATCGCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGTATCATCAGATCAATCACCATCACCCGACCCTCCAACCCGAACTATTAGGACATCAGACCTACCCATAA

mRNA sequence

ATATATATATTTGCCCATAAAAATTAAAGGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGTACTCTTGCTGTTACAAGCAGAAGCTTAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTTCTTAACCATATCACCAAACATGGCCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGGTTGCAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATCAATTATCTAAAGCCAGATTTGAAAAGAGGCCCGTTCTCGCAACCAGAAGAAGATTTAATCATTGAGCTTCATTCCGTTTTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAATCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTACGTAGACAAAGAAATCAGCAATGAAAACAACAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAACCATTCAAGTTCCGACATGTCGACCACTACCGACAAATCGGAGAACATGGGTATCGCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGTATCATCAGATCAATCACCATCACCCGACCCTCCAACCCGAACTATTAGGACATCAGACCTACCCATAA

Coding sequence (CDS)

ATGGGAAGGTACTCTTGCTGTTACAAGCAGAAGCTTAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTTCTTAACCATATCACCAAACATGGCCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGGTTGCAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATCAATTATCTAAAGCCAGATTTGAAAAGAGGCCCGTTCTCGCAACCAGAAGAAGATTTAATCATTGAGCTTCATTCCGTTTTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAATCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTACGTAGACAAAGAAATCAGCAATGAAAACAACAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAACCATTCAAGTTCCGACATGTCGACCACTACCGACAAATCGGAGAACATGGGTATCGCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGTATCATCAGATCAATCACCATCACCCGACCCTCCAACCCGAACTATTAGGACATCAGACCTACCCATAA

Protein sequence

MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTTDKSENMGIAITIPNNNTNPFEAISNLLFPTPNSCENPPISSNAFSWQPDELLQTASDLMRSDWYHQINHHHPTLQPELLGHQTYP
Homology
[Close]
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 8.8e-67
Identity = 134/234 (57.26%), Postives = 164/234 (70.09%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITILDDK----KIHEKASSIEVVPNHS---SSDMST--- 180
           IDP THKP +  E+ + N     ++D K    ++ +   SI  + + S   SS       
Sbjct: 121 IDPTTHKPLITNELQSLN-----VIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWF 180

Query: 181 ---TTDKSENMGIAITIPNNNTNPFEAISNLLFPTPNSCENPPISSNAFSWQPD 222
              TT  ++N     +  +N T   + I +L+     S    P++SN FS  P+
Sbjct: 181 PANTTTTNQNSAFCFS-SSNTTTVSDQIVSLISSMSTSSSPTPMTSN-FSPAPN 227

[Close]
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 218.4 bits (555), Expect = 9.2e-56
Identity = 96/118 (81.36%), Postives = 105/118 (88.98%), Query Frame = 1 

Query: 11  KLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLKPDLKRGPF 70
           K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWINYL+PDLKRG F
Sbjct: 13  KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 72

Query: 71  SQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDPNTHKP 129
           SQ EED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKL+Q+GIDP THKP
Sbjct: 73  SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQQGIDPATHKP 130

[Close]
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.8e-51
Identity = 96/176 (54.55%), Postives = 127/176 (72.16%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K  LR+G W+ EED+KL++HIT +G  CW ++PKLAGL RCGKSCRLRW NY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS+ EE+LI++LH+ LGNRWS+IAAQLPGRTDNEIKN WN+ +KK+L+ +G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTTDKSE 177
           +DPNTH P  D ++ +  ++     DD    E   S +V  + +S     +  KS+
Sbjct: 121 LDPNTHLPLEDSKLDDTEDDT----DD----EGGDSSDVTMSDASKSEKRSKKKSK 168

[Close]
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.9e-51
Identity = 111/215 (51.63%), Postives = 133/215 (61.86%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAG---------LQRCGK 60
           MG +SCC KQK+++GLWSPEEDEKL+N+I  +GHGCWSSVPK AG         LQRCGK
Sbjct: 1   MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYTHIHGFCLQRCGK 60

Query: 61  SCRLRWINYLKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSC 120
           SCRLRWINYL+PDLKRG FS  E  LIIELHS+LGNRW+QIA  LPGRTDNE+KN WNS 
Sbjct: 61  SCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSS 120

Query: 121 IKKKLKQKGIDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTT 180
           IKKKL       + H                       +   AS +  +P H+  + +T 
Sbjct: 121 IKKKLMSHHHHGHHH---------------------HHLSSMASLLTNLPYHNGFNPTTV 180

Query: 181 TDKSEN-MGIAITIPNNNTNP-FEAISNLLFPTPN 205
            D+S   M   IT    NTNP F   S+L  P+P+
Sbjct: 181 DDESSRFMSNIIT----NTNPNFITPSHLSLPSPH 190

[Close]
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50
Identity = 87/141 (61.70%), Postives = 113/141 (80.14%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K    KG W+ EED+KL+++I  HG GCW S+P+ AGLQRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG F+  E+DLII+LHS+LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +KG
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPNTHKPYVDKEISNENNNN 142
           IDP TH+P  + + S +++++
Sbjct: 121 IDPATHRPINETKTSQDSSDS 141

[Close]
BLAST of CmaCh12G008660 vs. TrEMBL
Match: D9ZJ65_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.4e-71
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+ +G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRLRG 120

Query: 121 IDPNTHKP---YVDKEISNE--NNNNITILDDKKIHEKAS 156
           IDPNTHKP    +D+ I  E  NNNNI +    K +EKAS
Sbjct: 121 IDPNTHKPLSEVLDQNIGKEINNNNNIKLSPTYKSNEKAS 160

[Close]
BLAST of CmaCh12G008660 vs. TrEMBL
Match: K3Z6E4_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_022113mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.0e-70
Identity = 122/135 (90.37%), Postives = 129/135 (95.56%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKL+NHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EEDLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPYVDKEIS 136
           IDPNTHKP  + + S
Sbjct: 121 IDPNTHKPLAEADCS 135

[Close]
BLAST of CmaCh12G008660 vs. TrEMBL
Match: J3M3T9_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.5e-70
Identity = 122/133 (91.73%), Postives = 128/133 (96.24%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKL+NHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EEDLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPYVDKE 134
           IDPNTHKP  D +
Sbjct: 121 IDPNTHKPLSDAD 133

[Close]
BLAST of CmaCh12G008660 vs. TrEMBL
Match: D7F2A8_SACOF (MYB18 OS=Saccharum officinarum PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.5e-70
Identity = 122/135 (90.37%), Postives = 129/135 (95.56%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKL+NHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EEDLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQDEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPYVDKEIS 136
           IDPNTHKP  + + S
Sbjct: 121 IDPNTHKPLTEADRS 135

[Close]
BLAST of CmaCh12G008660 vs. TrEMBL
Match: A5C8P8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020114 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.6e-70
Identity = 136/203 (67.00%), Postives = 157/203 (77.34%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLL HITK+GHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLMHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQQEESLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTTDKSENMGI 180
           IDPNTHKP V+ E     N    + +  K +EKA+ + +V   +   +ST    +E   +
Sbjct: 121 IDPNTHKPLVEAE-----NGQDKLPNSDKSNEKANELNLVEAENLKPLSTA---AEQYPV 180

Query: 181 AITIPNNNTNPFEAISNLLFPTP 204
            ++ P++  N     +NL  P P
Sbjct: 181 EVS-PSSKINSSSNGNNLTXPQP 194

[Close]
BLAST of CmaCh12G008660 vs. TAIR10
Match: AT1G57560.1 (AT1G57560.1 myb domain protein 50)

HSP 1 Score: 259.2 bits (661), Expect = 2.6e-69
Identity = 119/145 (82.07%), Postives = 131/145 (90.34%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           M R+SCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGL+RCGKSCRLRWINY
Sbjct: 1   MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS  E++LI+ELH+VLGNRWSQIAA+LPGRTDNEIKNLWNSCIKKKL +KG
Sbjct: 61  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 120

Query: 121 IDPNTHKPY--VDKEISNENNNNIT 144
           IDP THKP   V KE +  +NNN T
Sbjct: 121 IDPITHKPLSEVGKETNRSDNNNST 145

[Close]
BLAST of CmaCh12G008660 vs. TAIR10
Match: AT1G09540.1 (AT1G09540.1 myb domain protein 61)

HSP 1 Score: 256.9 bits (655), Expect = 1.3e-68
Identity = 126/194 (64.95%), Postives = 149/194 (76.80%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLL HIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS  EE+LI+ELH+VLGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKP------YVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMS----- 180
           IDPNTHKP      + DK+    +NN  +  D K     +++ +       SD+S     
Sbjct: 121 IDPNTHKPISEVESFSDKDKPTTSNNKRSGNDHKSPSSSSATNQDFFLERPSDLSDYFGF 180

Query: 181 TTTDKSENMGIAIT 184
              + + N+G+++T
Sbjct: 181 QKLNFNSNLGLSVT 194

[Close]
BLAST of CmaCh12G008660 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86)

HSP 1 Score: 255.0 bits (650), Expect = 5.0e-68
Identity = 134/234 (57.26%), Postives = 164/234 (70.09%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITILDDK----KIHEKASSIEVVPNHS---SSDMST--- 180
           IDP THKP +  E+ + N     ++D K    ++ +   SI  + + S   SS       
Sbjct: 121 IDPTTHKPLITNELQSLN-----VIDQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWF 180

Query: 181 ---TTDKSENMGIAITIPNNNTNPFEAISNLLFPTPNSCENPPISSNAFSWQPD 222
              TT  ++N     +  +N T   + I +L+     S    P++SN FS  P+
Sbjct: 181 PANTTTTNQNSAFCFS-SSNTTTVSDQIVSLISSMSTSSSPTPMTSN-FSPAPN 227

[Close]
BLAST of CmaCh12G008660 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55)

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-64
Identity = 122/189 (64.55%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAG------------LQR 60
           MGR+SCCYKQKLRKGLWSPEEDEKLL +ITK+GHGCWSSVPK AG            LQR
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGTFLFIQIHLLFGLQR 60

Query: 61  CGKSCRLRWINYLKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLW 120
           CGKSCRLRWINYL+PDLKRG FSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLW
Sbjct: 61  CGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 120

Query: 121 NSCIKKKLKQKGIDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDM 178
           NSC+KKKL+ +GIDP THK   + E   +        D  K  EK+    +V    SS  
Sbjct: 121 NSCLKKKLRLRGIDPVTHKLLTEIETGTD--------DKTKPVEKSQQTYLVETDGSSST 180

[Close]
BLAST of CmaCh12G008660 vs. TAIR10
Match: AT3G12720.1 (AT3G12720.1 myb domain protein 67)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-56
Identity = 114/222 (51.35%), Postives = 142/222 (63.96%), Query Frame = 1 

Query: 4   YSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLKP 63
           + CC K K+++GLWSPEEDEKLL +IT HGH  WSSVPKLAGLQRCGKSCRLRWINYL+P
Sbjct: 14  HRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCGKSCRLRWINYLRP 73

Query: 64  DLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDP 123
           DL+RG F++ EE +II++H +LGN+W+QIA  LPGRTDNE+KN WNSCIKKKL  +G+DP
Sbjct: 74  DLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKKKLLSQGLDP 133

Query: 124 NTHKPYVD-KEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTTDKSENMGIAI 183
           +TH      K  S+ NNNNI                  PN ++S M   TD  ++   A 
Sbjct: 134 STHNLMPSHKRSSSSNNNNIP----------------KPNKTTSIMKNPTDLDQST-TAF 193

Query: 184 TIPNNNTNPFEAISNLLFPTPNSCENP-----PISSNAFSWQ 220
           +I   N NP  +       +PN    P     PI+ N  S Q
Sbjct: 194 SI--TNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQ 216

[Close]
BLAST of CmaCh12G008660 vs. NCBI nr
Match: gi|449454113|ref|XP_004144800.1| (PREDICTED: transcription factor MYB86-like [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 1.8e-91
Identity = 202/328 (61.59%), Postives = 220/328 (67.07%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKL N+IT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLHNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITIL---DDKKIHEKASSI-EVVPNHSSS---------- 180
           IDPNTHKP ++KEI N ++NN  I+   DDKK HEK   I EVVP  +S+          
Sbjct: 121 IDPNTHKPLIEKEIINNSDNNDNIIITSDDKKSHEKTFPIEEVVPPTNSTTTTTTRKSIE 180

Query: 181 ---DMSTTT---------------DKSENMGIAITIPNNNTN----PFE-AISNLLFPTP 240
              DMSTTT               D S +M + I I NNNTN    PFE AISNL FP+P
Sbjct: 181 SCFDMSTTTTSTTSCNFSNFHQLNDGSSHMDLPI-IQNNNTNNASTPFEAAISNLFFPSP 240

Query: 241 NSC--------------ENPPIS----------------SNAFSWQPDELLQ---TASDL 258
           NSC              EN P S                +N F W      Q   TAS L
Sbjct: 241 NSCGVAHVRPSINLIPSENNPSSTVSSTSEVVAHNNNNNNNGFLWH--SDDQFLQTASIL 300

[Close]
BLAST of CmaCh12G008660 vs. NCBI nr
Match: gi|659070035|ref|XP_008453024.1| (PREDICTED: transcription factor MYB86-like [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 4.4e-90
Identity = 193/322 (59.94%), Postives = 218/322 (67.70%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLLN+IT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITIL---DDKKIHEKASSI-EVVPNHSSS---------D 180
           IDP+THKP ++KEI N ++NN +I+   DDKK HEK   I EVVP +S++         D
Sbjct: 121 IDPHTHKPLIEKEIINNSDNNDSIIITSDDKKSHEKTFPIEEVVPTNSTTTRKSIESCFD 180

Query: 181 MSTTT--------------DKSENMGIAITIPNNNTN---PFE-AISNLLFPTPNSC--- 240
           MSTTT              D S  M + I I +NNTN   PFE AISNL FP+ NSC   
Sbjct: 181 MSTTTTSTTCNFSNFHQLNDGSSLMDLPI-IQHNNTNDATPFEAAISNLFFPSSNSCGVA 240

Query: 241 -ENPPISSNAFSWQPDELLQTASD-----------------------------LMRSDWY 258
              P IS       P  ++ + S+                             LM++DW+
Sbjct: 241 HVRPSISLLPSENNPSSIVSSTSEVVVHNNNNNNSNNGFLWHSDDQFLQTASVLMKNDWH 300

[Close]
BLAST of CmaCh12G008660 vs. NCBI nr
Match: gi|694379671|ref|XP_009366014.1| (PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri])

HSP 1 Score: 280.8 bits (717), Expect = 2.4e-72
Identity = 133/160 (83.12%), Postives = 144/160 (90.00%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+Q+G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQRG 120

Query: 121 IDPNTHKPY---VDKEISNE--NNNNITILDDKKIHEKAS 156
           IDPNTHKP    +D+ I  E  NNNNI +    K +EKAS
Sbjct: 121 IDPNTHKPLSEALDQNIGKEINNNNNINLSPTYKSNEKAS 160

[Close]
BLAST of CmaCh12G008660 vs. NCBI nr
Match: gi|302398947|gb|ADL36768.1| (MYB domain class transcription factor [Malus domestica])

HSP 1 Score: 277.7 bits (709), Expect = 2.0e-71
Identity = 132/160 (82.50%), Postives = 143/160 (89.38%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+ +G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRLRG 120

Query: 121 IDPNTHKP---YVDKEISNE--NNNNITILDDKKIHEKAS 156
           IDPNTHKP    +D+ I  E  NNNNI +    K +EKAS
Sbjct: 121 IDPNTHKPLSEVLDQNIGKEINNNNNIKLSPTYKSNEKAS 160

[Close]
BLAST of CmaCh12G008660 vs. NCBI nr
Match: gi|659099227|ref|XP_008450495.1| (PREDICTED: transcription factor MYB86 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 4.5e-71
Identity = 138/209 (66.03%), Postives = 163/209 (77.99%), Query Frame = 1 

Query: 1   MGRYSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR+SCCYKQKLRKGLWSP+EDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQPEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQ EEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPYVDKEISNENNNNITILDDKKIHEKASSIEVVPNHSSSDMSTTTDKSENMGI 180
           IDPNTHKP V      EN +      + K+  +++ I+   + +++  + T D +  + I
Sbjct: 121 IDPNTHKPVVSGGGDVENES------ESKLPARSNDIDNTSDEANN--NNTNDTTPPLSI 180

Query: 181 AITI-PNNNTNPFEAISNLLFPTPNSCEN 209
            I I P+N+ +   + ++  FP   S  N
Sbjct: 181 PIIINPHNSNSQIYSQTHEFFPFQTSTTN 201

The following BLAST results are available for this feature:
BLAST of CmaCh12G008660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB86_ARATH8.8e-6757.26Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1[more]
MYB3_HORVU9.2e-5681.36Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3[more]
MYB2_PHYPA6.8e-5154.55Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1[more]
MYB26_ARATH8.9e-5151.63Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1[more]
MYB32_ARATH1.2e-5061.70Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1[more]
BLAST of CmaCh12G008660 vs. TrEMBL
Match NameE-valueIdentityDescription
D9ZJ65_MALDO1.4e-7182.50MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1[more]
K3Z6E4_SETIT2.0e-7090.37Uncharacterized protein OS=Setaria italica GN=SETIT_022113mg PE=4 SV=1[more]
J3M3T9_ORYBR3.5e-7091.73Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
D7F2A8_SACOF3.5e-7090.37MYB18 OS=Saccharum officinarum PE=4 SV=1[more]
A5C8P8_VITVI4.6e-7067.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020114 PE=4 SV=1[more]
BLAST of CmaCh12G008660 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G57560.12.6e-6982.07 myb domain protein 50[more]
AT1G09540.11.3e-6864.95 myb domain protein 61[more]
AT5G26660.15.0e-6857.26 myb domain protein 86[more]
AT4G01680.22.0e-6464.55 myb domain protein 55[more]
AT3G12720.15.7e-5651.35 myb domain protein 67[more]
BLAST of CmaCh12G008660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454113|ref|XP_004144800.1|1.8e-9161.59PREDICTED: transcription factor MYB86-like [Cucumis sativus][more]
gi|659070035|ref|XP_008453024.1|4.4e-9059.94PREDICTED: transcription factor MYB86-like [Cucumis melo][more]
gi|694379671|ref|XP_009366014.1|2.4e-7283.13PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri][more]
gi|302398947|gb|ADL36768.1|2.0e-7182.50MYB domain class transcription factor [Malus domestica][more]
gi|659099227|ref|XP_008450495.1|4.5e-7166.03PREDICTED: transcription factor MYB86 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G008660.1CmaCh12G008660.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..61
score: 8.0E-16coord: 67..110
score: 4.2
IPR001005SANT/Myb domainSMARTSM00717santcoord: 66..114
score: 2.3E-11coord: 13..63
score: 3.8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 6..64
score: 1.2E-27coord: 65..117
score: 3.1
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 12..108
score: 3.08
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..65
score: 24.873coord: 66..116
score: 18
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..235
score: 3.8E
NoneNo IPR availablePANTHERPTHR10641:SF465MYB TRANSCRIPTION FACTORcoord: 1..235
score: 3.8E