CmoCh12G008720 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGTAATTAACTTTTCATCCTCTTCCCTTTAATGGGTTCAAAAAAGTTACAAGATTTGAGATTTAGTTCTCGAATTTCGAGGAAGAAAAGAAAGAAAGTAAGAAAGTAAGAAAAGGTTAACTTTTTAACACGACCCTTATGGATCTCTAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGGTTTGTTTTCCCTTCTCTGTTCTTCCCTTTTGTTTTTGGTTTGTGACTCATTTTATAATATATTATTCGTTTAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG ATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAA
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 7.3e-69 Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 1
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3) HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56 Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 1
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 8.1e-52 Identity = 122/255 (47.84%), Postives = 150/255 (58.82%), Query Frame = 1
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-51 Identity = 95/172 (55.23%), Postives = 123/172 (71.51%), Query Frame = 1
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.1e-51 Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TrEMBL
Match: D9ZJ65_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 5.8e-73 Identity = 144/205 (70.24%), Postives = 157/205 (76.59%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TrEMBL
Match: K3Z6E4_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_022113mg PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71 Identity = 123/135 (91.11%), Postives = 130/135 (96.30%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TrEMBL
Match: J3M3T9_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71 Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TrEMBL
Match: V7CYN5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G221500g PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71 Identity = 127/171 (74.27%), Postives = 146/171 (85.38%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TrEMBL
Match: A5C8P8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020114 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 5.4e-71 Identity = 136/205 (66.34%), Postives = 158/205 (77.07%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86) HSP 1 Score: 261.9 bits (668), Expect = 4.1e-70 Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TAIR10
Match: AT1G09540.1 (AT1G09540.1 myb domain protein 61) HSP 1 Score: 261.2 bits (666), Expect = 7.0e-70 Identity = 119/148 (80.41%), Postives = 134/148 (90.54%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TAIR10
Match: AT1G57560.1 (AT1G57560.1 myb domain protein 50) HSP 1 Score: 256.1 bits (653), Expect = 2.3e-68 Identity = 129/218 (59.17%), Postives = 161/218 (73.85%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55) HSP 1 Score: 251.9 bits (642), Expect = 4.3e-67 Identity = 125/192 (65.10%), Postives = 143/192 (74.48%), Query Frame = 1
BLAST of CmoCh12G008720 vs. TAIR10
Match: AT3G12720.1 (AT3G12720.1 myb domain protein 67) HSP 1 Score: 215.7 bits (548), Expect = 3.4e-56 Identity = 102/197 (51.78%), Postives = 135/197 (68.53%), Query Frame = 1
BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|449454113|ref|XP_004144800.1| (PREDICTED: transcription factor MYB86-like [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 1.0e-102 Identity = 217/326 (66.56%), Postives = 230/326 (70.55%), Query Frame = 1
BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|659070035|ref|XP_008453024.1| (PREDICTED: transcription factor MYB86-like [Cucumis melo]) HSP 1 Score: 376.3 bits (965), Expect = 4.2e-101 Identity = 215/322 (66.77%), Postives = 233/322 (72.36%), Query Frame = 1
BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|694379671|ref|XP_009366014.1| (PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri]) HSP 1 Score: 285.8 bits (730), Expect = 7.5e-74 Identity = 145/205 (70.73%), Postives = 159/205 (77.56%), Query Frame = 1
BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|659099227|ref|XP_008450495.1| (PREDICTED: transcription factor MYB86 [Cucumis melo]) HSP 1 Score: 284.3 bits (726), Expect = 2.2e-73 Identity = 143/211 (67.77%), Postives = 166/211 (78.67%), Query Frame = 1
BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|302398947|gb|ADL36768.1| (MYB domain class transcription factor [Malus domestica]) HSP 1 Score: 282.3 bits (721), Expect = 8.3e-73 Identity = 144/205 (70.24%), Postives = 157/205 (76.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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