CmoCh12G008720 (gene) Cucurbita moschata (Rifu)

NameCmoCh12G008720
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(DNA-binding protein, putative) (MYB transcription factor) (Myb domain protein 50)
LocationCmo_Chr12 : 7941615 .. 7943058 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGTAATTAACTTTTCATCCTCTTCCCTTTAATGGGTTCAAAAAAGTTACAAGATTTGAGATTTAGTTCTCGAATTTCGAGGAAGAAAAGAAAGAAAGTAAGAAAGTAAGAAAAGGTTAACTTTTTAACACGACCCTTATGGATCTCTAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGGTTTGTTTTCCCTTCTCTGTTCTTCCCTTTTGTTTTTGGTTTGTGACTCATTTTATAATATATTATTCGTTTAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG

mRNA sequence

TAATATTATATATATATTTGCCCATAAAAATTAAAGAGTTGGAGTTGAAGAAAAGGAGTTCATATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAATTCTATCATAGCAAGGTACGTGTTATGTTACTATATCTGTTTTAGATCTAAACCTTCGTAACTTTTCTCCACCAATGAGCCAAAGTTACGAGACTTATATATCAGAGATTCGAGGTTTTGTGACATAGTTCGTATTCTTTTAAAACAACCCTTTAATTAATTAGGATTTCAAGAAACGAGACACTCGTATCGACTATCGAATATGTATTTTGTAATGGGTTTTGAGAGTGATAATATAAAGCGTTATGAAATTATTAATGGACCATGGTTCTTTAAATGGCTGTCCATCATTGTCTCCTGAAGATGGGGACTTTTTTCACTTTTTGATGTGGCCATCCATCTATCCTTTTCTAAATTACTACTTTGAATCAACCTG

Coding sequence (CDS)

ATGGGAAGGCACTCTTGCTGTTACAAGCAGAAGCTAAGGAAAGGGCTTTGGTCACCTGAAGAAGATGAGAAGCTCCTTAACCATATCACCAAACATGGTCATGGCTGTTGGAGTTCGGTCCCTAAACTCGCAGGCTTACAAAGGTGCGGGAAGAGTTGTAGATTGAGATGGATTAATTATCTTAAGCCAGATTTAAAAAGAGGCCCGTTCTCACAACAAGAAGAAGATTTGATAATTGAGCTCCATTCCGTTCTAGGCAACAGATGGTCACAAATTGCTGCTCAACTACCTGGACGAACCGACAACGAAATAAAGAACCTATGGAACTCGTGCATAAAAAAGAAGCTAAAGCAAAAAGGCATCGACCCGAACACTCACAAGCCTTTCATAGACAAAGAAATCAGCAATGAAAACAACATTACCATATTAGATGATAAAAAAATCCATGAAAAGGCTTCATCCATTGAAGTAGTTCCAAAGCATTCAAGTTCCGACATGTCGACCACTACTACTTACTTGAACGACAAATCGGAGCACATGAGTATCCCTATAACTATTCCAAATAATAACACCAACCCTTTTGAAGCCATTTCAAATTTGCTTTTCCCCACTCCCAATTCATGTGAAAATCCTCCTATTGTAAGTTCTAACGCCTTCTCGTGGCAGCCCGATGAGTTGCTTCAAACCGCCTCCGATCTCATGAGAAGTGATTGGCATCATCAGATCAATCACCGTCACCCGACCCTCCAACCCGAACTATTAGGGCAACCGACCTACCCGTAA
BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.3e-69
Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSS 164
           IDP THKP I  E+ + N         I +K +S EVV    S
Sbjct: 121 IDPTTHKPLITNELQSLN--------VIDQKLTSSEVVKSTGS 155

BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56
Identity = 101/130 (77.69%), Postives = 111/130 (85.38%), Query Frame = 1

Query: 1   MGRHS--CCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWI 60
           MGR S     + K+RKGLWSPEEDEKL NHI +HG GCWSSVP+LA L RCGKSCRLRWI
Sbjct: 1   MGRPSSGAVGQPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWI 60

Query: 61  NYLKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQ 120
           NYL+PDLKRG FSQQEED I+ LH +LGNRWSQIA+ LPGRTDNEIKN WNSCIKKKL+Q
Sbjct: 61  NYLRPDLKRGCFSQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLRQ 120

Query: 121 KGIDPNTHKP 129
           +GIDP THKP
Sbjct: 121 QGIDPATHKP 130

BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 8.1e-52
Identity = 122/255 (47.84%), Postives = 150/255 (58.82%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAG---------LQRCGK 60
           MG HSCC KQK+++GLWSPEEDEKL+N+I  +GHGCWSSVPK AG         LQRCGK
Sbjct: 1   MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYTHIHGFCLQRCGK 60

Query: 61  SCRLRWINYLKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSC 120
           SCRLRWINYL+PDLKRG FS QE  LIIELHS+LGNRW+QIA  LPGRTDNE+KN WNS 
Sbjct: 61  SCRLRWINYLRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSS 120

Query: 121 IKKKLKQKGIDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTT 180
           IKKKL       + H                     +   AS +  +P H+  +    TT
Sbjct: 121 IKKKLMSHHHHGHHH-------------------HHLSSMASLLTNLPYHNGFN---PTT 180

Query: 181 YLNDKSEHMSIPITIPNNNTNPFEAISNLLFPTPNSCENPPIVSSNAF--SWQPDELLQT 240
             ++ S  MS  IT    NTNP     N + P+  S  +P +++   F  S + D    T
Sbjct: 181 VDDESSRFMSNIIT----NTNP-----NFITPSHLSLPSPHVMTPLMFPTSREGDFKFLT 223

Query: 241 ASDLMRSDWHHQINH 245
            ++  +S  HH  NH
Sbjct: 241 TNNPNQSH-HHDNNH 223

BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-51
Identity = 95/172 (55.23%), Postives = 123/172 (71.51%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K  LR+G W+ EED+KL++HIT +G  CW ++PKLAGL RCGKSCRLRW NY
Sbjct: 1   MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS+ EE+LI++LH+ LGNRWS+IAAQLPGRTDNEIKN WN+ +KK+L+ +G
Sbjct: 61  LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG 120

Query: 121 IDPNTHKPFIDKEISNENNIT----------ILDDKKIHEKASSIEVVPKHS 163
           +DPNTH P  D ++ +  + T           + D    EK S  +  PK +
Sbjct: 121 LDPNTHLPLEDSKLDDTEDDTDDEGGDSSDVTMSDASKSEKRSKKKSKPKET 172

BLAST of CmoCh12G008720 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.1e-51
Identity = 87/139 (62.59%), Postives = 112/139 (80.58%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGR  CC K    KG W+ EED+KL+++I  HG GCW S+P+ AGLQRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG F+ +E+DLII+LHS+LGN+WS IA +LPGRTDNEIKN WN+ +K+KL +KG
Sbjct: 61  LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG 120

Query: 121 IDPNTHKPFIDKEISNENN 140
           IDP TH+P  + + S +++
Sbjct: 121 IDPATHRPINETKTSQDSS 139

BLAST of CmoCh12G008720 vs. TrEMBL
Match: D9ZJ65_MALDO (MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.8e-73
Identity = 144/205 (70.24%), Postives = 157/205 (76.59%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+ +G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRLRG 120

Query: 121 IDPNTHKPF-------IDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYL 180
           IDPNTHKP        I KEI+N NNI +    K +EKAS         S+++S      
Sbjct: 121 IDPNTHKPLSEVLDQNIGKEINNNNNIKLSPTYKSNEKASV-------GSNELSLVEAV- 180

Query: 181 NDKSEHMSIPITIPNNNTNPFEAIS 199
              S H   P +   N  NP E  S
Sbjct: 181 --SSRH---PTSASKNRFNPVEVSS 192

BLAST of CmoCh12G008720 vs. TrEMBL
Match: K3Z6E4_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_022113mg PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71
Identity = 123/135 (91.11%), Postives = 130/135 (96.30%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKL+NHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ+EEDLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPFIDKEIS 136
           IDPNTHKP  + + S
Sbjct: 121 IDPNTHKPLAEADCS 135

BLAST of CmoCh12G008720 vs. TrEMBL
Match: J3M3T9_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 123/133 (92.48%), Postives = 129/133 (96.99%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKL+NHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ+EEDLIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQEEEDLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPFIDKE 134
           IDPNTHKP  D +
Sbjct: 121 IDPNTHKPLSDAD 133

BLAST of CmoCh12G008720 vs. TrEMBL
Match: V7CYN5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G221500g PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 127/171 (74.27%), Postives = 146/171 (85.38%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQQEE+ IIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSC+KKKL+Q+G
Sbjct: 61  LRPDLKRGAFSQQEENSIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTT 172
           IDPNTH+P    E+ N+ +  +  D+   + ++ + VV       ++TTTT
Sbjct: 121 IDPNTHQPLY--EVENDKDKPLTADRSNQKASNEVSVVEPPKQKPITTTTT 169

BLAST of CmoCh12G008720 vs. TrEMBL
Match: A5C8P8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020114 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 5.4e-71
Identity = 136/205 (66.34%), Postives = 158/205 (77.07%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL HITK+GHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLMHITKYGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQQEE LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGAFSQQEESLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDPNTHKP ++ E   +    + +  K +EKA+ + +V   +   +ST        +E  
Sbjct: 121 IDPNTHKPLVEAENGQDK---LPNSDKSNEKANELNLVEAENLKPLSTA-------AEQY 180

Query: 181 SIPITIPNNNTNPFEAISNLLFPTP 206
            + ++ P++  N     +NL  P P
Sbjct: 181 PVEVS-PSSKINSSSNGNNLTXPQP 194

BLAST of CmoCh12G008720 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86)

HSP 1 Score: 261.9 bits (668), Expect = 4.1e-70
Identity = 122/163 (74.85%), Postives = 135/163 (82.82%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCC+KQKLRKGLWSPEEDEKLLN+IT+HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FSQ EE LIIELH+ LGNRWSQIA +LPGRTDNEIKN WNSC+KKKL++KG
Sbjct: 61  LRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSS 164
           IDP THKP I  E+ + N         I +K +S EVV    S
Sbjct: 121 IDPTTHKPLITNELQSLN--------VIDQKLTSSEVVKSTGS 155

BLAST of CmoCh12G008720 vs. TAIR10
Match: AT1G09540.1 (AT1G09540.1 myb domain protein 61)

HSP 1 Score: 261.2 bits (666), Expect = 7.0e-70
Identity = 119/148 (80.41%), Postives = 134/148 (90.54%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL HIT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS +EE+LI+ELH+VLGNRWSQIA++LPGRTDNEIKNLWNS IKKKLKQ+G
Sbjct: 61  LRPDLKRGAFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLKQRG 120

Query: 121 IDPNTHKPFIDKE-ISNENNITILDDKK 148
           IDPNTHKP  + E  S+++  T  ++K+
Sbjct: 121 IDPNTHKPISEVESFSDKDKPTTSNNKR 148

BLAST of CmoCh12G008720 vs. TAIR10
Match: AT1G57560.1 (AT1G57560.1 myb domain protein 50)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-68
Identity = 129/218 (59.17%), Postives = 161/218 (73.85%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           M RHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGL+RCGKSCRLRWINY
Sbjct: 1   MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRG FS +E++LI+ELH+VLGNRWSQIAA+LPGRTDNEIKNLWNSCIKKKL +KG
Sbjct: 61  LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDP THKP    E+  E N +  ++       ++ ++  K  +SD +  + +  ++S  +
Sbjct: 121 IDPITHKPL--SEVGKETNRSDNNNSTSFSSETNQDLFVK-KTSDFAEYSAFQKEESNSV 180

Query: 181 SIPITIPNNNTNPFE----AISNLLFPTPNSCENPPIV 215
           S+  ++ +     F     ++SN  F T   C  P I+
Sbjct: 181 SLRNSLSSMIPTQFNIDDGSVSNAGFDT-QVCVKPSII 214

BLAST of CmoCh12G008720 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55)

HSP 1 Score: 251.9 bits (642), Expect = 4.3e-67
Identity = 125/192 (65.10%), Postives = 143/192 (74.48%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAG------------LQR 60
           MGRHSCCYKQKLRKGLWSPEEDEKLL +ITK+GHGCWSSVPK AG            LQR
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGTFLFIQIHLLFGLQR 60

Query: 61  CGKSCRLRWINYLKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLW 120
           CGKSCRLRWINYL+PDLKRG FSQ EE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLW
Sbjct: 61  CGKSCRLRWINYLRPDLKRGAFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLW 120

Query: 121 NSCIKKKLKQKGIDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMST 180
           NSC+KKKL+ +GIDP THK   + E   +      D  K  EK+    +V    SS  +T
Sbjct: 121 NSCLKKKLRLRGIDPVTHKLLTEIETGTD------DKTKPVEKSQQTYLVETDGSSSTTT 180

BLAST of CmoCh12G008720 vs. TAIR10
Match: AT3G12720.1 (AT3G12720.1 myb domain protein 67)

HSP 1 Score: 215.7 bits (548), Expect = 3.4e-56
Identity = 102/197 (51.78%), Postives = 135/197 (68.53%), Query Frame = 1

Query: 4   HSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINYLKP 63
           H CC K K+++GLWSPEEDEKLL +IT HGH  WSSVPKLAGLQRCGKSCRLRWINYL+P
Sbjct: 14  HRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCGKSCRLRWINYLRP 73

Query: 64  DLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKGIDP 123
           DL+RG F+++EE +II++H +LGN+W+QIA  LPGRTDNE+KN WNSCIKKKL  +G+DP
Sbjct: 74  DLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNSCIKKKLLSQGLDP 133

Query: 124 NTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTT---TYLNDKSEHM 183
           +TH      + S+ +N     +  I +   +  ++   +  D STT    T +N  +   
Sbjct: 134 STHNLMPSHKRSSSSN-----NNNIPKPNKTTSIMKNPTDLDQSTTAFSITNINPPTSTK 193

Query: 184 SIPITIPNNNTNPFEAI 198
              +  PN  T P + +
Sbjct: 194 PNKLKSPNQTTIPSQTV 205

BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|449454113|ref|XP_004144800.1| (PREDICTED: transcription factor MYB86-like [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 1.0e-102
Identity = 217/326 (66.56%), Postives = 230/326 (70.55%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKL N+IT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLHNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEI-----SNENNITILDDKKIHEKASSI-EVVPKHSSS---------- 180
           IDPNTHKP I+KEI     +N+N I   DDKK HEK   I EVVP  +S+          
Sbjct: 121 IDPNTHKPLIEKEIINNSDNNDNIIITSDDKKSHEKTFPIEEVVPPTNSTTTTTTRKSIE 180

Query: 181 ---DMSTTTT-----------YLNDKSEHMSIPITIPNNNTN----PFE-AISNLLFPTP 240
              DMSTTTT            LND S HM +PI I NNNTN    PFE AISNL FP+P
Sbjct: 181 SCFDMSTTTTSTTSCNFSNFHQLNDGSSHMDLPI-IQNNNTNNASTPFEAAISNLFFPSP 240

Query: 241 NSC--------------ENPP--IVSS-------------NAFSW-QPDELLQTASDLMR 261
           NSC              EN P   VSS             N F W   D+ LQTAS LMR
Sbjct: 241 NSCGVAHVRPSINLIPSENNPSSTVSSTSEVVAHNNNNNNNGFLWHSDDQFLQTASILMR 300

BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|659070035|ref|XP_008453024.1| (PREDICTED: transcription factor MYB86-like [Cucumis melo])

HSP 1 Score: 376.3 bits (965), Expect = 4.2e-101
Identity = 215/322 (66.77%), Postives = 233/322 (72.36%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+IT HGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITIHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120

Query: 121 IDPNTHKPFIDKEISN--ENNITIL---DDKKIHEKASSI-EVVPKHSSS---------D 180
           IDP+THKP I+KEI N  +NN +I+   DDKK HEK   I EVVP +S++         D
Sbjct: 121 IDPHTHKPLIEKEIINNSDNNDSIIITSDDKKSHEKTFPIEEVVPTNSTTTRKSIESCFD 180

Query: 181 MSTTTT----------YLNDKSEHMSIPITIPNNNTN---PFE-AISNLLFPTPNSC--- 240
           MSTTTT           LND S  M +PI I +NNTN   PFE AISNL FP+ NSC   
Sbjct: 181 MSTTTTSTTCNFSNFHQLNDGSSLMDLPI-IQHNNTNDATPFEAAISNLFFPSSNSCGVA 240

Query: 241 -----------ENPP--IVSS---------------NAFSW-QPDELLQTASDLMRSDWH 261
                      EN P  IVSS               N F W   D+ LQTAS LM++DWH
Sbjct: 241 HVRPSISLLPSENNPSSIVSSTSEVVVHNNNNNNSNNGFLWHSDDQFLQTASVLMKNDWH 300

BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|694379671|ref|XP_009366014.1| (PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri])

HSP 1 Score: 285.8 bits (730), Expect = 7.5e-74
Identity = 145/205 (70.73%), Postives = 159/205 (77.56%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+Q+G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQRG 120

Query: 121 IDPNTHKPF-------IDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYL 180
           IDPNTHKP        I KEI+N NNI +    K +EKAS         S+++S      
Sbjct: 121 IDPNTHKPLSEALDQNIGKEINNNNNINLSPTYKSNEKASV-------GSNELSLVEAV- 180

Query: 181 NDKSEHMSIPITIPNNNTNPFEAIS 199
              S+H   P +   N  NP E  S
Sbjct: 181 --SSKH---PTSASENRFNPVEVSS 192

BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|659099227|ref|XP_008450495.1| (PREDICTED: transcription factor MYB86 [Cucumis melo])

HSP 1 Score: 284.3 bits (726), Expect = 2.2e-73
Identity = 143/211 (67.77%), Postives = 166/211 (78.67%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSP+EDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPDEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+QKG
Sbjct: 61  LRPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRQKG 120

Query: 121 IDPNTHKPFIDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYLNDKSEHM 180
           IDPNTHKP +      EN      + K+  +++ I+    ++S + +   T  ND +  +
Sbjct: 121 IDPNTHKPVVSGGGDVENE----SESKLPARSNDID----NTSDEANNNNT--NDTTPPL 180

Query: 181 SIPITI-PNNNTNPFEAISNLLFPTPNSCEN 211
           SIPI I P+N+ +   + ++  FP   S  N
Sbjct: 181 SIPIIINPHNSNSQIYSQTHEFFPFQTSTTN 201

BLAST of CmoCh12G008720 vs. NCBI nr
Match: gi|302398947|gb|ADL36768.1| (MYB domain class transcription factor [Malus domestica])

HSP 1 Score: 282.3 bits (721), Expect = 8.3e-73
Identity = 144/205 (70.24%), Postives = 157/205 (76.59%), Query Frame = 1

Query: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNHITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60
           MGRHSCCYKQKLRKGLWSPEEDEKLLN+ITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY
Sbjct: 1   MGRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLQRCGKSCRLRWINY 60

Query: 61  LKPDLKRGPFSQQEEDLIIELHSVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLKQKG 120
           L+PDLKRGPFSQQEE+LIIELH+VLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKL+ +G
Sbjct: 61  LRPDLKRGPFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCIKKKLRLRG 120

Query: 121 IDPNTHKPF-------IDKEISNENNITILDDKKIHEKASSIEVVPKHSSSDMSTTTTYL 180
           IDPNTHKP        I KEI+N NNI +    K +EKAS         S+++S      
Sbjct: 121 IDPNTHKPLSEVLDQNIGKEINNNNNIKLSPTYKSNEKASV-------GSNELSLVEAV- 180

Query: 181 NDKSEHMSIPITIPNNNTNPFEAIS 199
              S H   P +   N  NP E  S
Sbjct: 181 --SSRH---PTSASKNRFNPVEVSS 192

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB86_ARATH7.3e-6974.85Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1[more]
MYB3_HORVU1.9e-5677.69Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3[more]
MYB26_ARATH8.1e-5247.84Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1[more]
MYB2_PHYPA1.1e-5155.23Myb-related protein Pp2 OS=Physcomitrella patens subsp. patens GN=PP2 PE=2 SV=1[more]
MYB32_ARATH3.1e-5162.59Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
D9ZJ65_MALDO5.8e-7370.24MYB domain class transcription factor OS=Malus domestica GN=MYB40 PE=2 SV=1[more]
K3Z6E4_SETIT2.4e-7191.11Uncharacterized protein OS=Setaria italica GN=SETIT_022113mg PE=4 SV=1[more]
J3M3T9_ORYBR3.2e-7192.48Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
V7CYN5_PHAVU3.2e-7174.27Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_001G221500g PE=4 SV=1[more]
A5C8P8_VITVI5.4e-7166.34Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020114 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G26660.14.1e-7074.85 myb domain protein 86[more]
AT1G09540.17.0e-7080.41 myb domain protein 61[more]
AT1G57560.12.3e-6859.17 myb domain protein 50[more]
AT4G01680.24.3e-6765.10 myb domain protein 55[more]
AT3G12720.13.4e-5651.78 myb domain protein 67[more]
Match NameE-valueIdentityDescription
gi|449454113|ref|XP_004144800.1|1.0e-10266.56PREDICTED: transcription factor MYB86-like [Cucumis sativus][more]
gi|659070035|ref|XP_008453024.1|4.2e-10166.77PREDICTED: transcription factor MYB86-like [Cucumis melo][more]
gi|694379671|ref|XP_009366014.1|7.5e-7470.73PREDICTED: transcription factor MYB86 [Pyrus x bretschneideri][more]
gi|659099227|ref|XP_008450495.1|2.2e-7367.77PREDICTED: transcription factor MYB86 [Cucumis melo][more]
gi|302398947|gb|ADL36768.1|8.3e-7370.24MYB domain class transcription factor [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G008720.1CmoCh12G008720.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 67..110
score: 2.3E-13coord: 14..61
score: 8.1
IPR001005SANT/Myb domainSMARTSM00717santcoord: 66..114
score: 1.7E-12coord: 13..63
score: 3.8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 6..64
score: 1.2E-27coord: 65..117
score: 5.4
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 12..108
score: 1.76
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..65
score: 24.873coord: 66..116
score: 20
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..211
score: 9.1E
NoneNo IPR availablePANTHERPTHR10641:SF465MYB TRANSCRIPTION FACTORcoord: 1..211
score: 9.1E