CsaV3_2G007320 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G007320
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	40S ribosomal protein
Location	chr2 : 3699159 .. 3702304 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAATAAAAAAATATTGTAAATTGAAAATTTAAAGTTTAGAAAAGCAATTTGTCAAGGGAAGGGAACTTCACTCTCTCCTTTGGTACTCAAACCTCAAATTCTTTAACCGGCGGCCGGCCGCGCCCAAAGCATCGGTACGCCGACGAAGACTTGTGGTCATCGCCTCAACAATTCATCTGTGTTTTTTCTCGCCCCCATTTTCTTTCGGTATAATATAGCTTCTTTCTTATCTTTCTTTTTAGTTCAATTTCTCTGCCTTCGTGATTCATTATTGTTAAAGTCTCTTAGTGATTGTTAGTAATTTCTTGCAAATCGAAAAACTGAACCCAGAAATCATAATTGGAATCCATTTATACTTTATGTAAAGTAAAACATAAATCTTCTAATTTGAAGAACCCACGCTCAGAATATGAAATGTCACATTTAAGACAAGGACTTTTGTTGGCATTGGTAATTCTGTTAGAATCTTCCTTTGTAGAATCAAGTGTTGTTTCTTGCCTTTAGAACAATCTAGCAGTGGGAATTAGAATCGAATCATCTTTAGAATCTTGATTTAGTGAAGTGAAATGATAATTGATGAGTGTAAAGTTTTTTACCCTTCATTGTCCATAGTCTTTATGTTTTGATCGTACATTGTTTTTTATCGATGGTTTCATTTCGAATTGTGGTGTATGTTCATGGTAATTTCAGGATTAGCTCGTATTTTTTACAGAAAAAAAAGCCTCAAAAGTTCATTTGGCCTCTAAAATTGTTTATACCCTAATTCTAAGGATCTCGTGATTATCATTTCTGTTGATATTACAAGGTCGTGATTAACGTTTGGAACATTGACTCAACTATTTTGGATTGGGTTTGCATTCATTTTATTGTTCCAATGACTGAATTCTGGACAAGAAACGATTGTTCTAAGCTTAGTTTATGAAATTGCCAATTTTTTATCTGGTCCAGGAAATTAGCAGATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCTGTCAAGTATTCTTCTCAGCTCATTTGGTTTGATGTGCATTATCAAGTTTCGTGTCTTTCCTTTTTCCTGATCAACTTCTAGTGAACTCAAATGGCACTTTAATCGTCAATTGTTTTCTAATTGATTCTACTATATTTACTTACTCCATTTGAATAGAAACCACAATGTTCTAGAATTGTCTTTAGATGTACATGGATTCAGTTGAAGCAGTTTTTTTGGACCAATGTGAAAATCGAGGTTGGTTAGGTTAGCTACCCAAAAGAGCAGAATAGGGTCTCCAACCCCTCCACTAAATTTTGGTTTGGGTTCAAAAGAACAGTTGAGGCCCAAGAGTGAGAGTTGAGGGAAAAAAATGGAATCAAGATTAGGATTGTGAAGACTGAAAAAGAAAGGTAGTCGAATAAAGGGGAGATGAGAGATTGATATAATTAAGCGGGGACGAGATATGAACGCCACACGAAGATGGAGAGGTTGAGATGGAGATTCTATGAATGAGACGAGAGGAGATGATAGAGAGATAGAAATAAGTTGTGTATGATTCAAGATGGAGAGAGATGGGGGAGACGTGAGAAGGAATTGAGAAGTAGACAGGAGTTTGAGATGAAGAGAAACAACATGAATGAACCCTAGAAATTCCTCAACCCAAAAACTGAACCAAATTTTCAATTCTCTAAAAATCCAACCCAATGCAAACCCAAAGAAAATTCTAACTCAATCCAATCCAAACCCAAAAATAAAAAATCTAACCCACACTACTTTGGTTTGGGTAGCCGGGTTTGCTCGAGTTCTTGTTCTTGGGTCATTTGAACACCCTATATTGTGGAGTTTTGTTAAGTATCATGACTAAGTTTACCAAGTATGAGTATCTCTGGAAGAACTTTTGAAACAGAAGTTTTTTTTAAAAAAGTCTTTAATTACAACCGCAGAAAAAAAGTGCTTAATTATGGAAAACATCTGTGTTTGGTTCTGCTTTCTTAATTGTACTTTTAGATTCTTTCTCATCAAGCACTTGGTTGAATGGGTCAAATGCACTTTATTAGTGTTTCTCAGGAAACATTTAAGTGTTCTGGACTTGGTTACTTTCAAACTCGTGCGAGTGATCTGTGCTTTTTATCTGTGCTAGAAGCACTCCCATACAGCATATGCATGATAGTTTGCTGACGTTTCTCACCTAACCTTTCATTCATGGCTTTTTGGCTGCAGTACTAGGAAATTGAAACATTTTTTCATGTTCTTTGAAAATAGAAAACAATTGCGACTTTGTTTAAATCAAAACCAATATTTATCCACCCTTTCCATTTAAAGTGGATTGCCTGTCGTCCTAGGGGATTTTAATACTGTACTCTTAAGATGCACATACATCAAACCACTTTTTTTCGCATATAAATGCATTAACCTGTCGACTTTAAATTTCAGCGATGTCCATGCCAAAGTTCTAAACTCTTAAAAATGACATGGCACTATGTTTATATTCATATCCATATCCATGCTTCTTTACTCGTACTTAAGCTTGTGCGATGCTGGATTGTGTTGTGTGATAGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAAGGTAATTGACATTTATAGATTAATAATCTTATTGTATCATTAAAAAGTATTATTCAGATGTTTCCTTATTAGGAGCTAACTGATGTAATTAGTTTTGGTTAGTTTATGCTCTTGTTATTGTTATGTCTTGTTGACTCTTATCAAAGCCAAGATCCATGTTTAGATTGTATGTGTGGCTTCATGCCATAAAACTAAAAAGGAGCCTTAGGTCTACCTTTGTATTTTGTTTTTCTCAATAAAAGTTAGTTTATGAGTAGAAAAAAAGCTTTTAGTCATGTAACAAAGACCAAATTTTCTAATTTTATTGAATTGGATTGGTGAATATTATGTTAACTTTTTT

mRNA sequence

ATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAA

Coding sequence (CDS)

ATGGCACTTAGACGATTGTTAGGCTTTTCAGATGGTGAGATCATGAGATCAGATGCTAAGCCTTGTTCACAGTTGATGAAACAGACTGCTGGGTTATGTTCTGTTGAAGGAGCACTTGGGTTCTGGATTCTTTGTAGATTACATTATGGTCCAAGAATTACAGTACGTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCGATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCAGAATGTGAACCCCAGAATATAGCTGCTTATGACAATAGAAAGTTGTAA

Protein sequence

MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL

Homology

[Close]

BLAST of CsaV3_2G007320 vs. NCBI nr
Match: XP_004144737.1 (PREDICTED: uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hypothetical protein Csa_2G034810 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of CsaV3_2G007320 vs. NCBI nr
Match: XP_008453135.1 (PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453150.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 4.9e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of CsaV3_2G007320 vs. NCBI nr
Match: XP_022156333.1 (uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156335.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156336.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156337.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156338.1 uncharacterized protein LOC111023254 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 3.3e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGA SMSATSALLVRLFSPECEPQNIAAYD RK+
Sbjct: 61 WAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV 97

[Close]

BLAST of CsaV3_2G007320 vs. NCBI nr
Match: XP_022969628.1 (uncharacterized protein LOC111468599 [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 3.3e-42
Identity = 86/96 (89.58%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR  GFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of CsaV3_2G007320 vs. NCBI nr
Match: XP_023538321.1 (uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.1 bits (453), Expect = 7.3e-42
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR  GFSDG++MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of CsaV3_2G007320 vs. TAIR10
Match: AT1G57540.1 (unknown protein)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-40
Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALR+ LG+S+G++MRSDAKPCS+LMKQTA + +V GALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYDN K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of CsaV3_2G007320 vs. TrEMBL
Match: tr|A0A0A0LH12|A0A0A0LH12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.2e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 97

[Close]

BLAST of CsaV3_2G007320 vs. TrEMBL
Match: tr|A0A1S3BWM4|A0A1S3BWM4_CUCME (uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRKL 98
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  KL
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGKL 97

[Close]

BLAST of CsaV3_2G007320 vs. TrEMBL
Match: tr|A0A218VR93|A0A218VR93_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020167 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.5e-40
Identity = 78/96 (81.25%), Postives = 91/96 (94.79%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR+LG+SDGE+MRSDAKPCS+LM+QTA +C+V GALGFW+LCRLHYGPR+TV RSLR
Sbjct: 1  MALRRMLGWSDGELMRSDAKPCSRLMRQTAAVCTVGGALGFWVLCRLHYGPRVTVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WAACGA ++S+TSALLVRLFSPECEPQNIAAYD+ K
Sbjct: 61 WAACGAVTVSSTSALLVRLFSPECEPQNIAAYDHGK 96

[Close]

BLAST of CsaV3_2G007320 vs. TrEMBL
Match: tr|A0A2R6Q1S2|A0A2R6Q1S2_ACTCH (Plancitoxin-1 subunit beta like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24312 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 7.7e-40
Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR LGFSDGE+MRSDAKPCS+L + TAG+C+  GALGFW+LCRLHYGPRIT+ RSLR
Sbjct: 1  MALRRFLGFSDGELMRSDAKPCSRLTRHTAGICTFGGALGFWVLCRLHYGPRITIPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 97
          WA CGA S+S+T ALLVRLFSPECEPQNIAAYDN+K
Sbjct: 61 WAGCGAVSVSSTGALLVRLFSPECEPQNIAAYDNKK 96

[Close]

BLAST of CsaV3_2G007320 vs. TrEMBL
Match: tr|A0A1S4B0T3|A0A1S4B0T3_TOBAC (uncharacterized protein LOC107803245 OS=Nicotiana tabacum OX=4097 GN=LOC107803245 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-39
Identity = 78/95 (82.11%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60
          MALRR+LG+SDGE+MRSDAKPCS+LM+QTAG+ SV GALGFW+LCRLHYGPRITV RSLR
Sbjct: 1  MALRRMLGYSDGELMRSDAKPCSRLMRQTAGIFSVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNR 96
          WA CGA SMS+++ALLVRLFSPECEPQNIAAYD +
Sbjct: 61 WATCGAISMSSSTALLVRLFSPECEPQNIAAYDKK 95

The following BLAST results are available for this feature:

BLAST of CsaV3_2G007320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144737.1	1.8e-48	100.00	PREDICTED: uncharacterized protein LOC101221073 [Cucumis sativus] >KGN61028.1 hy...	[more]
XP_008453135.1	4.9e-46	95.88	PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 P...	[more]
XP_022156333.1	3.3e-42	87.63	uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncha...	[more]
XP_022969628.1	3.3e-42	89.58	uncharacterized protein LOC111468599 [Cucurbita maxima]	[more]
XP_023538321.1	7.3e-42	88.54	uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G007320 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G57540.1	2.9e-40	77.08	unknown protein	[more]

BLAST of CsaV3_2G007320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G007320 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LH12\|A0A0A0LH12_CUCSA	1.2e-48	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1	[more]
tr\|A0A1S3BWM4\|A0A1S3BWM4_CUCME	3.2e-46	95.88	uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=...	[more]
tr\|A0A218VR93\|A0A218VR93_PUNGR	4.5e-40	81.25	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr020167 PE=4 SV=1	[more]
tr\|A0A2R6Q1S2\|A0A2R6Q1S2_ACTCH	7.7e-40	80.21	Plancitoxin-1 subunit beta like OS=Actinidia chinensis var. chinensis OX=1590841...	[more]
tr\|A0A1S4B0T3\|A0A1S4B0T3_TOBAC	2.2e-39	82.11	uncharacterized protein LOC107803245 OS=Nicotiana tabacum OX=4097 GN=LOC10780324...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G007320.1	CsaV3_2G007320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36331	FAMILY NOT NAMED	coord: 1..95

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G007320	CSPI02G04990	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G007320	Cucsa.090350	Cucumber (Gy14) v1	cgycucB097
CsaV3_2G007320	CmaCh12G008690	Cucurbita maxima (Rimu)	cmacucB0205
CsaV3_2G007320	CmoCh12G008750	Cucurbita moschata (Rifu)	cmocucB0187
CsaV3_2G007320	Cp4.1LG07g07180	Cucurbita pepo (Zucchini)	cpecucB1017
CsaV3_2G007320	CsGy2G005130	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G007320	Carg16445	Silver-seed gourd	carcucB0952
CsaV3_2G007320	Cla019995	Watermelon (97103) v1	cucwmB159
CsaV3_2G007320	MELO3C004152	Melon (DHL92) v3.5.1	cucmeB141
CsaV3_2G007320	ClCG02G014650	Watermelon (Charleston Gray)	cucwcgB137
CsaV3_2G007320	Lsi11G006640	Bottle gourd (USVL1VR-Ls)	cuclsiB108
CsaV3_2G007320	MELO3C004152.2	Melon (DHL92) v3.6.1	cucmedB134
CsaV3_2G007320	Cla97C02G040420	Watermelon (97103) v2	cucwmbB123
CsaV3_2G007320	Bhi06G001232	Wax gourd	cucwgoB141

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G007320	Wax gourd	cucwgoB136
CsaV3_2G007320	Silver-seed gourd	carcucB0598
CsaV3_2G007320	Cucurbita maxima (Rimu)	cmacucB0934
CsaV3_2G007320	Cucurbita moschata (Rifu)	cmocucB0069
CsaV3_2G007320	Cucurbita moschata (Rifu)	cmocucB0924
CsaV3_2G007320	Cucurbita pepo (Zucchini)	cpecucB0115
CsaV3_2G007320	Melon (DHL92) v3.5.1	cucmeB119
CsaV3_2G007320	Melon (DHL92) v3.6.1	cucmedB113