Cp4.1LG07g07180 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g07180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	40S ribosomal protein S23-1
Location	Cp4.1LG07 : 6116574 .. 6123813 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGGTGTTCACAGGCTGTCAGTCGAGTTGGAGGAGCGTTCGAGAGTTATTCAGTTACAAGAGGGTCGTTCCACAGCATCAGTCTATCTTTGTATTCGAGTCATTTGTATAAGCCCTAAAAATAATAATAAGGGAGAAAAAAAAATTGTAAAAAAAATATTTAGTTCATCAGCGCAGCCCCCAAATTCTGCGCTAGTATCTTCTTCTTCGCTAGTCCATTACGCGTTCGATTTCAGTCCTCTCTGTAATTCCGAAGCTCAGAGTCTGGGACCGGCGGCGGCAGAAGCACCGGCTACGCCCAAATTGCATTCGCCGTTGTTCTTCAGGTATTATATCGCTTCGTTTATCTTTCTTTTGATTTCAATTTCTCTGTCTCATGATTCATTACTGGTAAACTCTCTATGTGAGTGCTTGCAATTTGTTACAACCCGAAATATTGAACCCAGAAAACCGAATCGAAACCCCTTTGATTTAATCCCTTGCCTCCTTTATTCATTTTGGTGATTGGCGATTCTGGCATTTGATCCTAACCGTAGCCGCCTCTGTGCTCATTCCTAGGCCTTTGTCTTTGGGTTCTTCGTCTTCCAGTCCTCTGTGATTAGGTTCTTAAACAAAACTTAACTTGTGTTCTTCTGTTCTCAGTAACGAATTCAACCTCGAACATGATTGTGTTGCTCATTTAGTTCATAACGTTCATATTCTCATTTATTTTGGTTATTAACTTTCATTTAGTTTATAACCATTTTGTTTCGTATTCTCATTTATTTGGTTTATGTCTGAGAATTAGTATTATTATGTTTATATAAATGCTTGTCTAGCATTGTTTTGAGGCGTGGAGTCGAGTGGAATCATTATCATTTTGTATTTGCCTAAAAGCAATTGGGAGGAACTTTTGTTGAGAGGCTTGTAAACACTTTGGTTATAGTGATTGGCTACCACATGTGGATGTAGGAGAATTTCTTCTCTCCGAACCACGTAAATTTTTGTGTCTCTTTGTTTAATTTCTGTTTGTGAGTGTGTGAGTGCGATCGATCTTGCTTCCACTTCTGCTGCAACAATTTGGTATCATAACATTTTTTGTTGTGGCATTACAACACAACAAGTGGTATCTCAGAGCATTGAAGGTTGTGGCATTACGGTACAACAAATTGCATCTAAAATGGATGGATTAACATTTCCTATATAGGATAAGAGAGAAGAAATCTTGTATTGGTTGGCTTGTTGGTTCATTTTCCCTCTGCTCAGGTTCCATCAGGCTCCAATTTTTCATATGATTTGTTTAAAGATTCAAACCAGAATCACAATCAACTTTGAACTCTTTCTAATCTCCTGGCTAATCCTAAGCCTCTGCATTCTAGCCTGTTGGATAAGTAGCCTAAAGCTCTAGATGTGTTTGTGTTCTCAAATCAAACTGACCAAAAACTCCTTTTATTGGGTTGATTTTTGAATATGCTCTTGTACATTACTTAATTTTTGTGATTGAAAGCTCAGTTTCTCATCAGAAAAAACTTTGACGCCCAAAAAGTCCCATGTCCGGACTAACCGCCGGAGATTTTCAAAACGTATTTTCCCGTTTTTTGCGGGAGCAGAGCAGTCAAAGAAAAGTTTCAAAACAAAGGAATAGCACAGAGCTCATACTAAATGATAATCCAACGCTTAACTACACCTTATGATGAATACAGATTTGACTTCCTTCCCTTCCTTAGCTACCTATGAAACTCTTTCTTCAACAGCGTCCGACGCCTGACTTGGTCAAATTTGTGCTGAATACAGCAGGTGTGTGCATGAAGCCGGGGGGTTATTACCCCCTAAATGGTCCATGCCTGATTGAAAATTGGGATATTGCCTCTAGTGATGTTTTAGAAAGGGTCCATACTCATTTTTTATTCTACTGACTGAATTATGGTTTCTGCAAAGATTTTAAACTCAATTTATGAAGCTATCAATTTTGATTTGGTCCAGGAATTTAGCAGATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGATCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCTGTTAAGTATTCTTCTCATCTGGTTTTAAATGCATAATGAAGTTGCATGTTTTTCCCTTTTCCAGTTCATCTCTTAGTGAAGATTAATGAGTTTCCTTATTGATTCTAATCTATTTAGTTACCATATAAATGGAAGCTATAGTATTCTGAATCTGAAGTTCGAATAGGTATCAGGTTAAGTTGCCTAAATACGAGTATGTTTGGGAGTACTTATAAACTTCTAAAATAAATGCTTATAACAAAAGTGTAACGGCCCAAGCCCACCGCTAGCATATATTGTCCTCCTCAAGATTTTTAAAACGTGTCGTTTAGGGAGAGGTTTCCACACCCTTGTAAGGAAGGCTTTGTTCCCTCTCCAACCGATGTGGGATCTTACAATCCACCCCCCTTGGGGGCCAACGTCTCTGCTGGCACACCGCCCGGTGACTGGCTTTGATACCATTTGTAACGGCCTAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCTGTTAAAGATCACGTATTTGTTTAGATTGCTGTCAGTTAGTATCTAACTAAATCTCTGTGTTAGGAGTTAGATTTAGTTTTTGATTTGATTTAGTTTTGATTTGATTTGATTTGATTTTGATTTGTTTACTGGTTTGCTACCAGATTTTCTCCCGATATTTTAGGTAGATTTTCTGAATATCTTTTGTATTCTCTGTATAAATATGGAGCATTCTTGCTCTCCAAAATTCAATCTTCTCATCAATTATTCAATCAATCCCTCTTTCACTAACAATTGGTATCAGAGCTATCTTCTTAAGGGATCTGTGAGATCAAAATGGGAGGAGAATCCAGTTTTTCCGCTGTTGCACCACCAGTTTTCGATGGAGACAATTATCAAATGTGGGCAGTTCGTATGGAGACTTATTTGGAGGCCTTGGATCTTTGGGAAGCAATAGAAGAGGATTACGAGGTCCCTCCGCTTCCAGCAAATCCTACTGTAGCACAAATCAAATTACAGAAGGAAAAGAAGACAAGGAAATCAAAGGCGAAAGCTTGCCTATTTGCCGCTGTATCACAAATGATCTTCATGCGAATAATGTCCCTCAAAACAGCAAAGGAAATCTGGGATTATCTCAAGGCCGAATATGAAGGAGATGAGAGGATTCGTGGAATGAAAGCCCTAAATTTGATTAGGGATTTCGAGTTGCAGAAGATGAAGGAGTCAGAGTCGGTGAAAGAGTACTCTGACAGACTTCTCAGCATTGCCAACAAGGTGAGATTGCTTGGTTCTGTTTTAAATGATTCAAGGATCGTTGAAAAGCTGCTAGTCACTATTCCAGAGAAGTTTGAAGCCACCATTACTACTCTGGAGAACACCAAAGACTTGTCAAAGATTTCTCTTACAGAGCTCTTGAATGCTTTACAAGCACAAGAGCAAAGGAGGTCGATGAGGCAAGAAGGGGTGATTGAAGGTGCCTTACGTGTTAAGCATCAAGACAGCAGCAGGTATAAAAACAATAAAAATTTCAAAAATCAATTGACGTATGGAGATTCATCTGCCAATTATCAGAAGACGAAAGGAGGAGGTTTCAAAAAATCCTATCCACCTTGCCGCCATTGTGAGAAGAAAGGTCATCCACCATACAAGTGTTGGAGAAGACCTGACGCCTTCTGCTTCAAATGCAATCAACTTGGACATGAAGCTGTGATCTGCAAAGCCAAAGGTCTGGTGAAAGAAGTAGATGCACAGGTCGTTGATCAAGAAGAAGAAGAAGAAGATCAATTGTGTATGGTCACTTCTTCCTCAAGCAAAGAATCAAGCGAGAGCTAGTTGATTAACAGTGGGTGCACAAATCACATGACATATGACAAGGAGTCTTTTGAGGAATTAAGAGACACCGAAGAAGATAAGAGAGTGAGCATTGGCAATGGTGAACACTTGGAAGTCAAGGGTAAAGGCACAGTAGCTATAACAAGTTATGAAGGTACAAAATTTATTCCAGATGTTTTATTTGTGCCTAAAATTGATCAAAATATCTTAAGTGTTGGTCAGTTACTTGATAAAGGCTATAAAGTGTTGTTTGAGAATAAGCCGTGCTTGATCAAAGATGCTAGTGGCAAAGACTTGTTCCATGTCAAAATGGAAGGAAAAAGCTTTGCTCTAAATCCGACGGCCTTTATATCCAGAGTTAGTGCCACTGAGATTTGGCACAAAAGACTTAGACATTTTCATCATCGAGGTTTGCTTCAGATGCAGTCAAAGAAGTTGGTAGAAGAACTCACTAACATTGATGATGACATGCCTCCTTACCGTGCTTGTATTTTTGGGAAGCAACATAGGCAACCCTTTCCTAAACAGGCATGGAGAGTCTCGAAAAAACTGCAGCTGGTTCATATTGATCTTTGTGGTCCTCAGCGAACACCATCATTAAATGGTAATCTTTATTACATTGCTTTTATTAATGATCTAACAAGAATGTGTTGGATATTCTTGCTGAAGCAAAAGTCAGAAGTTGCGGGTGTATTTTGGAAATTCAAAGCCAAAGTTGAGAATGAAGGTGCATGCTTGATTCAGACTATAAGATCAGATAATAGCAAGGAGTACACTTCAGAAACTTTTAACCGGTTTTGTGAAGAGGCTGGAATTGAACATCAATTGACAACACCATACACTCCTCAACAGAATGACGTCACTGAAAGGAGGAATAAATTCATAATGGAGATGATGAGATGCATGCTTCATGAGAAGGATCTTCCAAAACGTTTTTGGGGAAAAGCAGCAAACACTGTTGTGTGCTTGCAAAATCGAATTTCAACAAAAGCTGTGAAGGATCTGACACCATTTGAAGTTTGGTATGGTTACAAACGTTCTTTAAAGTTCCTTAGAGTATTTAGGTGTCTTTGCTTCACTCACATTCCACAGGTCAAGCGTGATAAGCTTGACAAAAAGTCAGAAGTTGGCATCTTGACAAAAAGTCAGAAGTTGGCATCTTTGTTGGGTATAGCACTGTATCCAAAGCTTATAAAGTTTTTCAACCACACACTAGTCATGTTATTGTGAACCGAGATGTTCATTTTGCTGGAAATGAGCAATGGAATTGGGAAGAACTGACGAAGGTGAATCAGATTTCTAATGCACCAAACAATTTAATCTTTGGTAGCATGTTAGAAGAGTCTAAAGATGAACGACAAGATGCTTTGGTTGATGATGCACCTGTCCGAGGAGGAGCTTTTCGTGATCGAGAAAAACAAAATCTGGAGTTTGGTTGATCGACCTCTGAACAGAAAGATAATTGGAGCAAGATAGGTGTTTAGAAAAAAGCTTGGAGTTCACAGCATCTAAACAAGGAGGAGTGTTAAAGATCACGTATTTGTTTAGATTGCTGTCAGTTAGTATCTAACTAAATCTCTGTGTTAGGAGTTAGATTTAGTTTTTGATTTGATTTAGTTTTGATTTGATTTGATTTTGATTTGTTTACTGGTTTGTTACCAGATTTTCTCCCGATATTTTAGGTAGATTTTCTGAATATCTTTTGTATTCTCTGTATAAATATGGAGCATTCTTGCTCTCCAAAATTCAATCTTCTCATCAATTATTCAATCAATCCCTCTTTCACTAACACTTCCCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTTCACAACCTTGTAAGGAAGGCTTCGTTGGGATCTCACAATCCACCTCCCTTGGGGGGCCAACGTCCCTGCTCGGTGACTGACTCTGATACCATTTGTAACGGCCTAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTTAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTTGTAAGGAAGGCTTCGTTCCCCTCTCCAACTGATGTGGGATCTCACAATCCACCTCCCTTGGGGGGCCAACGTCCCCACCCGGTGACTGACTCTGATACCATTTGTAACGGTCTAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTTCCTTCCGCCTTTCCCTTTCGGGCTTCCCCTCAAGATTTTTAAAACGCATCTACTAGGGAGAGGTTTTTACACCCTTGTAAGGAAGGCTTCGTTCCCCTCTCCAACCGATGTGGGATTTCACAAAAAGTCTTTAATCACGAGCACCTTCGAAAAGAAGTGCTTAATGACGGATCATATTCGTGTTTGGTCCAACATTTTAAGAATACTTTTCTTTAGGTTCTTTCTCATCAAGCACTTGAGCCAATGGGGAAAATGCACTTTATCAGCGTTTTCTTACGAATCATTCAAGTGTTTTGAACAGTTTTTTTTTTTATAAAAGAATACTTTTAAGTTACTTTCAAACATAGTATGCACACATGACATTTCTCTGCCGGATTCGTTACATTTGTTGCCTTTCTTCTATGACTTTCTGGATGTCGTAGAAGCAAATTGAAGCACTTTTTCATGTAACTTTGATTAAATCAAGAACAATATTCAAGGTTAGATTCAAATCCAATGCAAAGCATCAGTTGTGGTGGCGCCTTTACAGTATTGAAGTAGATTGCCTGTGATCTCAGAGGGTTTTAATATTGCACTTATTAAGCTTGTGGGCTTCTGGATTCTGTTGTGTGATAGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGAAAGCTGCAAGGTAATTGACATTCAAACCGCAATGATCATAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGACTCCATACAACCATGTATTCAATTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCGAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTATAA

mRNA sequence

TCAGGTGTTCACAGGCTGTCAGTCGAGTTGGAGGAGCGTTCGAGAGTTATTCAGTTACAAGAGGGTCGTTCCACAGCATCAGTCTATCTTTGTATTCGAGTCATTTGTATAAGCCCTAAAAATAATAATAAGGGAGAAAAAAAAATTGTAAAAAAAATATTTAGTTCATCAGCGCAGCCCCCAAATTCTGCGCTAGTATCTTCTTCTTCGCTAGTCCATTACGCGTTCGATTTCAGTCCTCTCTGTAATTCCGAAGCTCAGAGTCTGGGACCGGCGGCGGCAGAAGCACCGGCTACGCCCAAATTGCATTCGCCGTTGTTCTTCAGATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGATCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGAAAGCTGCAAGGTAATTGACATTCAAACCGCAATGATCATAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGACTCCATACAACCATGTATTCAATTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCGAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTATAA

Coding sequence (CDS)

ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGATCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGAAAGCTGCAAGGTAA

Protein sequence

MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKGKAAR

Homology

[Close]

BLAST of Cp4.1LG07g07180 vs. TrEMBL
Match: A0A067DQJ3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034386mg PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRFFGFSDG+LMRSDAKPCS+LM+QTAG+ TVGG L FW+LCRLHYGPR+TVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WA CGA S+S+T+ALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. TrEMBL
Match: A0A0A0LH12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034810 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.5e-42
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRR  GFSDG++MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. TrEMBL
Match: D7UAA5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00340 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.9e-42
Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRR FGFSDG+LMRSDAKPCS+LMKQTAGL TVGGG AFWILCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLFGFSDGELMRSDAKPCSRLMKQTAGLFTVGGGFAFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGA S+S++SALLVRLFSP CEPQNIAAYD  K
Sbjct: 61 WAACGAVSVSSSSALLVRLFSPACEPQNIAAYDNKK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. TrEMBL
Match: V4SWJ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013195mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.0e-41
Identity = 80/96 (83.33%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRFFGFSDG+LMRSDAKPCS+LM+QTAG+ TVGG L FW+LCRLHYGPR+TVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WA CGA S+S+T+ALLV LFSPECEPQNIAAYD+GK
Sbjct: 61 WAGCGAVSVSSTTALLVCLFSPECEPQNIAAYDRGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. TrEMBL
Match: M5W2I7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025034mg PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-41
Identity = 81/95 (85.26%), Postives = 88/95 (92.63%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRF GFSDG+LMRSDAKPCS+LM+ TAG+ +VGG L FWILCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFLGFSDGELMRSDAKPCSRLMRHTAGIFSVGGALGFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKG 96
          WAACGA SMS+T+ALLVRLFSPECEPQNIA YDKG
Sbjct: 61 WAACGAVSMSSTTALLVRLFSPECEPQNIATYDKG 95

[Close]

BLAST of Cp4.1LG07g07180 vs. TAIR10
Match: AT1G57540.1 (AT1G57540.1 unknown protein)

HSP 1 Score: 162.5 bits (410), Expect = 1.3e-40
Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALR+  G+S+GDLMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRQKLGWSEGDLMRSDAKPCSRLMKQTAAIFTVGGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAGCGALSVSTSTAMLVRLFSPECEPQNIAAYDNIK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. NCBI nr
Match: gi|720066668|ref|XP_010276591.1| (PREDICTED: uncharacterized protein LOC104611304 [Nelumbo nucifera])

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-44
Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRFFGFSDG+LMRSDAKPCS+LM+ TAG+ TVGG LAFW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSRLMRHTAGVFTVGGALAFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGA SMS+TSALLVRLFSPECEPQNIAAYDKGK
Sbjct: 61 WAACGAVSMSSTSALLVRLFSPECEPQNIAAYDKGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. NCBI nr
Match: gi|659070047|ref|XP_008453135.1| (PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-44
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRR  GFSDG++MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWVLCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDRGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. NCBI nr
Match: gi|641825997|gb|KDO45244.1| (hypothetical protein CISIN_1g034386mg [Citrus sinensis])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRRFFGFSDG+LMRSDAKPCS+LM+QTAG+ TVGG L FW+LCRLHYGPR+TVPRSLR
Sbjct: 1  MALRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGALGFWVLCRLHYGPRVTVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WA CGA S+S+T+ALLVRLFSPECEPQNIAAYD+GK
Sbjct: 61 WAGCGAVSVSSTTALLVRLFSPECEPQNIAAYDRGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. NCBI nr
Match: gi|1009116492|ref|XP_015874802.1| (PREDICTED: uncharacterized protein LOC107411684 [Ziziphus jujuba])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 83/96 (86.46%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          M+LRRFFGFSDG+LMRSDAKPCS+LM+QTAG+ TVGGGL FWILCRLHYGPRITVPRSLR
Sbjct: 1  MSLRRFFGFSDGELMRSDAKPCSRLMRQTAGIFTVGGGLGFWILCRLHYGPRITVPRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGA ++S+TSALLVRL SPECEPQNIAAYD GK
Sbjct: 61 WAACGAVTVSSTSALLVRLLSPECEPQNIAAYDTGK 96

[Close]

BLAST of Cp4.1LG07g07180 vs. NCBI nr
Match: gi|449453986|ref|XP_004144737.1| (PREDICTED: uncharacterized protein LOC101221073 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 6.5e-42
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MALRRFFGFSDGDLMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLR 60
          MALRR  GFSDG++MRSDAKPCSQLMKQTAGLC+V G L FWILCRLHYGPRITV RSLR
Sbjct: 1  MALRRLLGFSDGEIMRSDAKPCSQLMKQTAGLCSVEGALGFWILCRLHYGPRITVRRSLR 60

Query: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDKGK 97
          WAACGAASMSATSALLVRLFSPECEPQNIAAYD  K
Sbjct: 61 WAACGAASMSATSALLVRLFSPECEPQNIAAYDNRK 96

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07180 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g07180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067DQJ3_CITSI	1.2e-42	84.38	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034386mg PE=4 SV=1	[more]
A0A0A0LH12_CUCSA	4.5e-42	88.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034810 PE=4 SV=1	[more]
D7UAA5_VITVI	5.9e-42	87.50	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00340 PE=4 SV=...	[more]
V4SWJ5_9ROSI	1.0e-41	83.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013195mg PE=4 SV=1	[more]
M5W2I7_PRUPE	2.2e-41	85.26	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025034mg PE=4 SV=1	[more]

BLAST of Cp4.1LG07g07180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G57540.1	1.3e-40	78.13	unknown protein	[more]

BLAST of Cp4.1LG07g07180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|720066668\|ref\|XP_010276591.1\|	5.3e-44	89.58	PREDICTED: uncharacterized protein LOC104611304 [Nelumbo nucifera]	[more]
gi\|659070047\|ref\|XP_008453135.1\|	5.3e-44	89.58	PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo]	[more]
gi\|641825997\|gb\|KDO45244.1\|	1.7e-42	84.38	hypothetical protein CISIN_1g034386mg [Citrus sinensis]	[more]
gi\|1009116492\|ref\|XP_015874802.1\|	1.7e-42	86.46	PREDICTED: uncharacterized protein LOC107411684 [Ziziphus jujuba]	[more]
gi\|449453986\|ref\|XP_004144737.1\|	6.5e-42	88.54	PREDICTED: uncharacterized protein LOC101221073 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07180.1	Cp4.1LG07g07180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36331	FAMILY NOT NAMED	coord: 2..99 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g07180	Cucsa.090350	Cucumber (Gy14) v1	cgycpeB0178
Cp4.1LG07g07180	CmaCh12G008690	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g07180	CmoCh12G008750	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g07180	Cla019995	Watermelon (97103) v1	cpewmB807
Cp4.1LG07g07180	Csa2G034810	Cucumber (Chinese Long) v2	cpecuB823
Cp4.1LG07g07180	MELO3C004152	Melon (DHL92) v3.5.1	cpemeB773
Cp4.1LG07g07180	ClCG02G014650	Watermelon (Charleston Gray)	cpewcgB734
Cp4.1LG07g07180	CSPI02G04990	Wild cucumber (PI 183967)	cpecpiB824
Cp4.1LG07g07180	Lsi11G006640	Bottle gourd (USVL1VR-Ls)	cpelsiB661
Cp4.1LG07g07180	MELO3C004152.2	Melon (DHL92) v3.6.1	cpemedB909
Cp4.1LG07g07180	CsaV3_2G007320	Cucumber (Chinese Long) v3	cpecucB1017
Cp4.1LG07g07180	Bhi06G001232	Wax gourd	cpewgoB1022
Cp4.1LG07g07180	CsGy2G005130	Cucumber (Gy14) v2	cgybcpeB274
Cp4.1LG07g07180	Carg16445	Silver-seed gourd	carcpeB1263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g07180	Silver-seed gourd	carcpeB0806
Cp4.1LG07g07180	Cucurbita pepo (Zucchini)	cpecpeB143
Cp4.1LG07g07180	Cucurbita pepo (Zucchini)	cpecpeB499
Cp4.1LG07g07180	Cucurbita maxima (Rimu)	cmacpeB163
Cp4.1LG07g07180	Cucurbita maxima (Rimu)	cmacpeB795
Cp4.1LG07g07180	Cucurbita moschata (Rifu)	cmocpeB748