Carg16445 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCTGTTAAGTATTCTTCTCATCTGGTTTTAAATGCATAATCAAGTTGCATGTTTTTCCCTTTTCCAGTTCATCTCTTAGTGAAGATTAATGAGTTTCCTTATTGATTCTAATCTATTTAGTTACCATATAAATGGAAGCTATAGTATTCTGAATCTGAAGTTCGAATAGGTATCAGGTTAAGTTGCCTAAATACGAGTATGTTTGGGAGTACTTATAAACTTCTAAAATAAATGCTTATAACAAAAGTGTAACGGCCCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGCCTACTAGGGAGAGGTTTCCACACCCTTGTAAGGAAGGCTTCGTTACCCTCTCCAACTGATATGGGATCTCACAATCCACCTCTCTTGGGGGGCCAACGTCCCCGCCCGGTAATTGACTCTAATACCATTTGTAACGGTCTAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGTTTTCCCTTCCGCCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCATCTACTAGGGAGAGGTTTTCACACCCTTGTAAGGAAGGCTTCGTTCCCCTCTCCAACCGATGTGGGATTTCACAAAAAGTCTTTAATCACGAGCACCTTCGAAAAGAAGTGCTTAATGACGGATCATATTCGTGTTTGGTCCAACATTCTTAAGAATACTTTTCTTTTAGGTTCTTTCTCATCAAGCACTTGAGCCAATGGGGAAAATGCACTTTATCAGTGTTTTCTTACGAATCATTCAAGTGTTTTGAACAGTTTTTTTTTTATAAAAGAATACTTTTAAGTTACTTTCAAACATAGTATGCACACGACATTTCTCTGCCGGATTCGTTACATTTGTTGCCTTTCTTCTATGACTTTCTGGATGTAGTAGAAGCAAATTGAAGCACTTTTTCATTTATCTTTGATTAAATCAAGAACAATATTCAAGGTTAGATTCAAATCCAATGCAAAGCATCAGTTGTGGTGGTGCCTTTACAGTATTGAAGTAGATTGCCTGTGATCTCAGAGGGTTTTAATATTGCACTTATTAAGCTTGTGGGCTTCTGGATTCTGTTGTGTGATAGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAATTGACATTCAAAGCGCAATGATCTTAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGGCTCCATACAACCATGTATTCAGTTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCAAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTAGAATTAAAGTGACTCCAATTCCATTTCTTGAGTAGACATTTTTGTTATTTTCCCCCAAAAAAGAACTGTTTTTTTCAACTCATACATGATGTAGGTACACATCCCTTTTATTTTGTCCAATAAGAATCATAGTCCATACACTTTCTCTTACCAAACCGGAATTGACCTAAATTGTTTTCATTTGATGATTATGATCTCAATTCA ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAATTGACATTCAAAGCGCAATGATCTTAGTGTATTGCTTTTGAAGTTACAATTTTGTGTTTATGGTTGAGTACGTGATAGTTAACTATCTTGCCACGCACTCGGTTCGTTCATGGCTCCATACAACCATGTATTCAGTTACGTTGTTATTGTTAAGTTTCTCGACTCTTGTCATAGCTAAGGAGAAATTATTGGACGGAGTATGTTACAATGTGACAATGGCTTTGCAAAATGTATTTTCATAGGGACTAAATTGGTAACTTAATTTTAGATGTCGTATCGAGCTTTATATATTCCGACCCCATTAGTTGCTTGTTGGGGGTGGTTTCGAAAGTAGAATTAAAGTGACTCCAATTCCATTTCTTGAGTAGACATTTTTGTTATTTTCCCCCAAAAAAGAACTGTTTTTTTCAACTCATACATGATGTAGGTACACATCCCTTTTATTTTGTCCAATAAGAATCATAGTCCATACACTTTCTCTTACCAAACCGGAATTGACCTAAATTGTTTTCATTTGATGATTATGATCTCAATTCA ATGGCGCTTAGACGGTTCTTTGGTTTTTCTGATGGTGAGCTAATGAGATCGGACGCTAAACCGTGTTCACAGTTGATGAAACAGACTGCTGGATTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTTTGCAGATTACACTATGGTCCAAGAATTACAGTTCCTAGGAGTCTGCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCGACCTCGGCTTTGCTTGTTCGATTGTTTAGTCCAGAATGTGAACCTCAGAACATTGCTGCATATGACAAAGGGCAAGCTGCAAGGTAA MALRRFFGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKGQAAR
BLAST of Carg16445 vs. NCBI nr
Match: XP_022937466.1 (uncharacterized protein LOC111443868 [Cucurbita moschata]) HSP 1 Score: 206.8 bits (525), Expect = 3.3e-50 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg16445 vs. NCBI nr
Match: XP_022969628.1 (uncharacterized protein LOC111468599 [Cucurbita maxima]) HSP 1 Score: 205.3 bits (521), Expect = 9.6e-50 Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg16445 vs. NCBI nr
Match: XP_023538321.1 (uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.1 bits (518), Expect = 2.1e-49 Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Carg16445 vs. NCBI nr
Match: XP_022156333.1 (uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156334.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156335.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156336.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156337.1 uncharacterized protein LOC111023254 [Momordica charantia] >XP_022156338.1 uncharacterized protein LOC111023254 [Momordica charantia]) HSP 1 Score: 187.6 bits (475), Expect = 2.1e-44 Identity = 89/99 (89.90%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Carg16445 vs. NCBI nr
Match: XP_008453135.1 (PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453144.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo] >XP_008453150.1 PREDICTED: uncharacterized protein LOC103493937 [Cucumis melo]) HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Carg16445 vs. TAIR10
Match: AT1G57540.1 (unknown protein) HSP 1 Score: 160.6 bits (405), Expect = 4.9e-40 Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0
BLAST of Carg16445 vs. TrEMBL
Match: tr|A0A1U8BA55|A0A1U8BA55_NELNU (uncharacterized protein LOC104611304 OS=Nelumbo nucifera OX=4432 GN=LOC104611304 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.9e-44 Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Carg16445 vs. TrEMBL
Match: tr|A0A1S3BWM4|A0A1S3BWM4_CUCME (uncharacterized protein LOC103493937 OS=Cucumis melo OX=3656 GN=LOC103493937 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 8.9e-44 Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Carg16445 vs. TrEMBL
Match: tr|A0A2H5NT88|A0A2H5NT88_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_073870 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42 Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Carg16445 vs. TrEMBL
Match: tr|A0A067DQJ3|A0A067DQJ3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g034386mg PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42 Identity = 81/96 (84.38%), Postives = 91/96 (94.79%), Query Frame = 0
BLAST of Carg16445 vs. TrEMBL
Match: tr|A0A0A0LH12|A0A0A0LH12_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034810 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 8.3e-42 Identity = 85/93 (91.40%), Postives = 87/93 (93.55%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|