CsaV3_1G031530 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTCCACACGCATTACTTCCTCCTTGTTTCTCAAGCTCCTACAGAAATTTCCAACCAATACCCATAACATTATTGTTAATTATATTATGCTTATTGCCGGCTATTAGCATTATAAATACCCCTAAGTTATCCCTTTCGTTTTTGTTAACGAACAAACTCCTACAACAACAACAACCAAGAGCAAGAGCAAGAAGAAGAAGAAAAAAAAGTCAAATCAGTTGAGGAAAAAATAAAAAAATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAATCATCAATATAATCCCACCTATATATTATATTCTTCTCCAATTTGGTGAGGCAGATTCAATTCGATTAGTTCAAGAAGATTTGAATTTGAAGATGGGGTTACTGGGAATGATGATCCATTTGATGAATATTCATAATGGCTAAATTAATTAGCCTTGCATTTGGAGTAGTATTTGAATTTCTTGTTGTGAAAATTCAATTATTGTGTGCTTTGATTAATTATCTTTTTTGGCTCTCAACAACAAGATGTCCCACTTGCTTTCATTGGATGACAAATTGAAGGCAATAATCGGGATAATTAGGATAATTTGGTTTTGAAATTTCAAGAATTTTGTTCTATTTTTTTCTTTTTTTAGTGAAAATAATGGAAAATACAATGATTTATTTATTCTTTATAATGTAATTACTTATTAATTGAAATTTCTCTTTCCTGTATATATTATATTGGTTGGTTCATTTGTAATGTAAATTGAATAAAGTGTCAACATCTCAATTTCTTGAAAATGCCTATAGATAAATGTCCCAATGAACCTTGTGAATAATATAACCAATCCAATATACTATGTTATGCTTTAAGAAGTC ATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAA ATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAA MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDIIMEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_011648497.1 (PREDICTED: uncharacterized protein LOC101218317 [Cucumis sativus] >KGN65448.1 hypothetical protein Csa_1G423060 [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 7.6e-57 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_008453609.1 (PREDICTED: uncharacterized protein LOC103494271 [Cucumis melo]) HSP 1 Score: 209.9 bits (533), Expect = 4.8e-51 Identity = 115/121 (95.04%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43 Identity = 98/119 (82.35%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_022987374.1 (uncharacterized protein LOC111484948 [Cucurbita maxima]) HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42 Identity = 96/118 (81.36%), Postives = 100/118 (84.75%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_022921804.1 (uncharacterized protein LOC111429947 [Cucurbita moschata]) HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42 Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TAIR10
Match: AT5G57510.1 (unknown protein) HSP 1 Score: 111.7 bits (278), Expect = 3.2e-25 Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A0A0LUK4|A0A0A0LUK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 5.0e-57 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1S3BWN6|A0A1S3BWN6_CUCME (uncharacterized protein LOC103494271 OS=Cucumis melo OX=3656 GN=LOC103494271 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.1e-51 Identity = 115/121 (95.04%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1R3KF19|A0A1R3KF19_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01854 PE=4 SV=1) HSP 1 Score: 150.2 bits (378), Expect = 3.0e-33 Identity = 76/120 (63.33%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1R3G4U7|A0A1R3G4U7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_36848 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 6.6e-33 Identity = 76/120 (63.33%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1Q3AVK8|A0A1Q3AVK8_CEPFO (DUF761 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03124 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-31 Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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