CsaV3_1G031530 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G031530
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDUF761 domain-containing protein
Locationchr1 : 18628018 .. 18629199 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCCACACGCATTACTTCCTCCTTGTTTCTCAAGCTCCTACAGAAATTTCCAACCAATACCCATAACATTATTGTTAATTATATTATGCTTATTGCCGGCTATTAGCATTATAAATACCCCTAAGTTATCCCTTTCGTTTTTGTTAACGAACAAACTCCTACAACAACAACAACCAAGAGCAAGAGCAAGAAGAAGAAGAAAAAAAAGTCAAATCAGTTGAGGAAAAAATAAAAAAATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAATCATCAATATAATCCCACCTATATATTATATTCTTCTCCAATTTGGTGAGGCAGATTCAATTCGATTAGTTCAAGAAGATTTGAATTTGAAGATGGGGTTACTGGGAATGATGATCCATTTGATGAATATTCATAATGGCTAAATTAATTAGCCTTGCATTTGGAGTAGTATTTGAATTTCTTGTTGTGAAAATTCAATTATTGTGTGCTTTGATTAATTATCTTTTTTGGCTCTCAACAACAAGATGTCCCACTTGCTTTCATTGGATGACAAATTGAAGGCAATAATCGGGATAATTAGGATAATTTGGTTTTGAAATTTCAAGAATTTTGTTCTATTTTTTTCTTTTTTTAGTGAAAATAATGGAAAATACAATGATTTATTTATTCTTTATAATGTAATTACTTATTAATTGAAATTTCTCTTTCCTGTATATATTATATTGGTTGGTTCATTTGTAATGTAAATTGAATAAAGTGTCAACATCTCAATTTCTTGAAAATGCCTATAGATAAATGTCCCAATGAACCTTGTGAATAATATAACCAATCCAATATACTATGTTATGCTTTAAGAAGTC

mRNA sequence

ATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAA

Coding sequence (CDS)

ATGGAGGCGATTAGCTTATTGGGTCGGCTGAGGAAGGCGGTGAAGAAGATTAGATTCATGATGAATTTTAGCATTCAAAGATGGCGGTTAGCGGCGATGTTAGGCCGGACTTCGTCGAGAAATCTCCGTCTTAGCTTCACCGAACGTCCGGGATTAAAGGCTTGTTCGGAAGATATTATTATGGAAGAAGAACAGTCGGTTTCTTCTTCATCTCGTGGGCTACAAAGAACCACCAGCTACGCTTCTGAAGATGACGTGGACTCCCGTGCGGAGGCTTTTATTGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGAAATAGTTTTGATTAA

Protein sequence

MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDIIMEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD
BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_011648497.1 (PREDICTED: uncharacterized protein LOC101218317 [Cucumis sativus] >KGN65448.1 hypothetical protein Csa_1G423060 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII
Sbjct: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120
           MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD
Sbjct: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120

BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_008453609.1 (PREDICTED: uncharacterized protein LOC103494271 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 4.8e-51
Identity = 115/121 (95.04%), Postives = 116/121 (95.87%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLK-ACSEDI 60
           MEAISLLGRLRKAVKKI+FMMNFSIQRWRLAAMLGRTSSRNLRLSF ERPGLK ACSEDI
Sbjct: 1   MEAISLLGRLRKAVKKIKFMMNFSIQRWRLAAMLGRTSSRNLRLSFNERPGLKAACSEDI 60

Query: 61  IMEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSF 120
           IMEEE  VSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCR NSF
Sbjct: 61  IMEEE-PVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRRNSF 120

BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43
Identity = 98/119 (82.35%), Postives = 104/119 (87.39%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           M A SLLGRLRKAV+K++FMM F+IQ WRLAAMLGRTSSRNLRLSF E PGLK C EDII
Sbjct: 1   MAATSLLGRLRKAVEKLKFMMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSF 120
              E S +SSSRGLQRT SYASEDDVD RAEAFIANFYRQLRIERQVSLEL+YCRGNSF
Sbjct: 61  ESSEHS-NSSSRGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGNSF 118

BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_022987374.1 (uncharacterized protein LOC111484948 [Cucurbita maxima])

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-42
Identity = 96/118 (81.36%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           M A SLLGRLR AV+K++FMM F+IQ WRLAAMLGRTSSRNLRLSF E PGLK C EDII
Sbjct: 1   MAATSLLGRLRNAVEKLKFMMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNS 119
              E S SSS  GLQRT SYASEDDVD RAEAFIANFYRQLRIERQVSLELQYCRGNS
Sbjct: 61  ESSEHSNSSSRGGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELQYCRGNS 118

BLAST of CsaV3_1G031530 vs. NCBI nr
Match: XP_022921804.1 (uncharacterized protein LOC111429947 [Cucurbita moschata])

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 95/118 (80.51%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           M A SLLGRLRKAV+K++F+M F+IQ WRLAAMLGRTSSRNLRLSF E PGLK C EDII
Sbjct: 1   MAATSLLGRLRKAVEKLKFVMKFNIQSWRLAAMLGRTSSRNLRLSFNESPGLKVCKEDII 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNS 119
              E S SSS RGLQRT SYASEDDVD RAEAFIANFYRQLRIERQVSLEL+YCRG+S
Sbjct: 61  ESSEHSNSSSRRGLQRTPSYASEDDVDKRAEAFIANFYRQLRIERQVSLELRYCRGSS 118

BLAST of CsaV3_1G031530 vs. TAIR10
Match: AT5G57510.1 (unknown protein)

HSP 1 Score: 111.7 bits (278), Expect = 3.2e-25
Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 0

Query: 5   SLLGRLRKAVKKIRFMMNFSIQR-WRLAAMLG-RTSSRNLRLSFTERPGLKACSEDIIME 64
           SLL RLR+AV K++F+++F I   W L  MLG  +SS +LRLSF +RPGL A       E
Sbjct: 8   SLLNRLRQAVNKVKFVLSFKINSLWGLVPMLGSSSSSSSLRLSFNDRPGLTAA----FTE 67

Query: 65  EEQSVSSSSRG-LQRTTSY--ASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNS 119
            E   + SSRG L RT SY  +S++D+D++AE FIANFYRQL+IERQ+SLEL+YC+GN+
Sbjct: 68  NEPDSTGSSRGALYRTVSYDQSSDEDIDNKAEMFIANFYRQLKIERQISLELKYCQGNN 122

BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A0A0LUK4|A0A0A0LUK4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.0e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII
Sbjct: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120
           MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD
Sbjct: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120

BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1S3BWN6|A0A1S3BWN6_CUCME (uncharacterized protein LOC103494271 OS=Cucumis melo OX=3656 GN=LOC103494271 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-51
Identity = 115/121 (95.04%), Postives = 116/121 (95.87%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLK-ACSEDI 60
           MEAISLLGRLRKAVKKI+FMMNFSIQRWRLAAMLGRTSSRNLRLSF ERPGLK ACSEDI
Sbjct: 1   MEAISLLGRLRKAVKKIKFMMNFSIQRWRLAAMLGRTSSRNLRLSFNERPGLKAACSEDI 60

Query: 61  IMEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSF 120
           IMEEE  VSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCR NSF
Sbjct: 61  IMEEE-PVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRRNSF 120

BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1R3KF19|A0A1R3KF19_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01854 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-33
Identity = 76/120 (63.33%), Postives = 98/120 (81.67%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           ME  SLLGRLR+AVKK++F++NF++ RWR+A M+G  SSR  RLSFT++PGL+AC  D +
Sbjct: 1   MENCSLLGRLRRAVKKVKFLLNFNMNRWRIANMIGARSSR--RLSFTDKPGLRACVADDL 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120
            + + S S SSR L RTTSY SEDD+D RAE FIANF++QL+IERQVSL+L+Y RGNSF+
Sbjct: 61  YDSDDSSSHSSRRLSRTTSYPSEDDIDKRAEMFIANFHKQLQIERQVSLQLKYLRGNSFN 118

BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1R3G4U7|A0A1R3G4U7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_36848 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.6e-33
Identity = 76/120 (63.33%), Postives = 98/120 (81.67%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           ME  SLLGRLR+AVKK++F++NF++ RWR+A M+G  SSR  RLSFT++PGL+AC  D +
Sbjct: 1   MENWSLLGRLRRAVKKVKFLLNFNMNRWRIANMIGARSSR--RLSFTDKPGLRACVADDL 60

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120
            + + S S SSR L RTTSY SEDD+D RAE FIANF++QL+IERQVSL+L+Y RGNSF+
Sbjct: 61  YDSDDSGSHSSRRLSRTTSYPSEDDIDKRAEMFIANFHKQLQIERQVSLQLKYLRGNSFN 118

BLAST of CsaV3_1G031530 vs. TrEMBL
Match: tr|A0A1Q3AVK8|A0A1Q3AVK8_CEPFO (DUF761 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03124 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.8e-31
Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 0

Query: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60
           M+  S+L  LR+AVKK++ +MN ++ RWRLA+M+G +SS+  RLSF +RPGL+AC  DI 
Sbjct: 3   MDKWSVLSSLRRAVKKVKILMNLNLHRWRLASMIGSSSSKR-RLSFNDRPGLRACITDI- 62

Query: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSF 120
            + E   S SSRGL RTTSYASEDD+D RA+ FIANF+RQL+ ERQVSLELQYCR NSF
Sbjct: 63  -DTESYDSGSSRGLHRTTSYASEDDIDKRADLFIANFHRQLQFERQVSLELQYCRANSF 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011648497.17.6e-57100.00PREDICTED: uncharacterized protein LOC101218317 [Cucumis sativus] >KGN65448.1 hy... [more]
XP_008453609.14.8e-5195.04PREDICTED: uncharacterized protein LOC103494271 [Cucumis melo][more]
XP_023515447.12.1e-4382.35uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo][more]
XP_022987374.11.4e-4281.36uncharacterized protein LOC111484948 [Cucurbita maxima][more]
XP_022921804.11.8e-4280.51uncharacterized protein LOC111429947 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT5G57510.13.2e-2555.46unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LUK4|A0A0A0LUK4_CUCSA5.0e-57100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1[more]
tr|A0A1S3BWN6|A0A1S3BWN6_CUCME3.1e-5195.04uncharacterized protein LOC103494271 OS=Cucumis melo OX=3656 GN=LOC103494271 PE=... [more]
tr|A0A1R3KF19|A0A1R3KF19_COCAP3.0e-3363.33Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01854 PE=4 ... [more]
tr|A0A1R3G4U7|A0A1R3G4U7_9ROSI6.6e-3363.33Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_36848 PE=4 SV=1[more]
tr|A0A1Q3AVK8|A0A1Q3AVK8_CEPFO2.8e-3163.03DUF761 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0071456 cellular response to hypoxia
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G031530.1CsaV3_1G031530.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 83..114
e-value: 4.0E-12
score: 45.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..81
NoneNo IPR availablePANTHERPTHR33098FAMILY NOT NAMEDcoord: 3..118
NoneNo IPR availablePANTHERPTHR33098:SF3SUBFAMILY NOT NAMEDcoord: 3..118

The following gene(s) are paralogous to this gene:

None