Cp4.1LG04g12950 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g12950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDUF761 domain protein
LocationCp4.1LG04 : 10704006 .. 10704371 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAATTTATGATGAACTTCAACGTCCAAAGCTGGCGTTTGGCGGCGAGGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGGTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCAGCTTAGGATCGAGCGCCAGGTTTCGCTTGACCTTCAATACTGCCGTGGGAATAGCTTTAACCAGCTTTAG

mRNA sequence

ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAATTTATGATGAACTTCAACGTCCAAAGCTGGCGTTTGGCGGCGAGGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGGTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCAGCTTAGGATCGAGCGCCAGGTTTCGCTTGACCTTCAATACTGCCGTGGGAATAGCTTTAACCAGCTTTAG

Coding sequence (CDS)

ATGGCGGCGATTAGCTTGTTGGGTCGGCTGAGGAAGGCAGTGAAGAAGCTGAAATTTATGATGAACTTCAACGTCCAAAGCTGGCGTTTGGCGGCGAGGTTTGGACGAAGTTTGTCGAGAAGCCTCCGCGTCAGCTTCAAGGAAGCGCCGGGATTGAAAGGGTGTAGGGAAGAGGATGTTAGAGAGTTGTGTGGAGAGTCGATTTCGTGGAGAGGGGTTCAAAGAACAAGGAGCTACGCTTCTGAAGACGATGTGGACATGCGTGCGGAGGCTTTCATAGCCAATTTCTATCGCCAGCTTAGGATCGAGCGCCAGGTTTCGCTTGACCTTCAATACTGCCGTGGGAATAGCTTTAACCAGCTTTAG

Protein sequence

MAAISLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELCGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFNQL
Homology
[Close]
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match: A0A0A0LUK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423060 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-39
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 1 

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDV 60
           M AISLLGRLRKAVKK++FMMNF++Q WRLAA  GR+ SR+LR+SF E PGLK C E+ +
Sbjct: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60

Query: 61  -RELCGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
             E    S S RG+QRT SYASEDDVD RAEAFIANFYRQLRIERQVSL+LQYCRGNSF+
Sbjct: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120

[Close]
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match: A0A061GQY6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_039000 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.8e-24
Identity = 63/115 (54.78%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELC 64
           SLL RLR+AVKK+KF++NFN+  WR+A+  G S S S R+SF + PGL+ C ++   +  
Sbjct: 5   SLLSRLRRAVKKVKFLLNFNMNRWRIASMIGASPS-SQRLSFTDRPGLRACADDYDSDDS 64

Query: 65  GESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
           G     R + RT SY SEDD+D RAE FIANF++QL+IERQVSL L+Y R NSF+
Sbjct: 65  GS----RRLARTTSYLSEDDIDKRAEMFIANFHKQLQIERQVSLQLKYLRANSFD 114

[Close]
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match: A0A059CJY9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00167 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 60/115 (52.17%), Postives = 77/115 (66.96%), Query Frame = 1 

Query: 6   LLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELCG 65
           LLGRLR+AV K++F++NF++  W   +  GR  S    +SF    GL+ C   D +E   
Sbjct: 6   LLGRLRRAVHKVRFLLNFDLHRWISNSATGRGPSSKRLLSFSNPSGLRACASMDDKEYQD 65

Query: 66  ESISWRG--VQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSF 119
              S RG  +QRT SY SEDDVD RAE FI NF+RQL++ERQ+S+DL YCRGNSF
Sbjct: 66  SPGSSRGSGLQRTISYPSEDDVDSRAEMFITNFHRQLQLERQISMDLHYCRGNSF 120

[Close]
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match: A0A0D2R228_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G100700 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.3e-22
Identity = 61/116 (52.59%), Postives = 83/116 (71.55%), Query Frame = 1 

Query: 6   LLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELCG 65
           LL RLR+AV K+K ++NFN+  WR+A+  G S S S R+SF + PGL+ C +++  E  G
Sbjct: 6   LLSRLRRAVNKVKVLLNFNMNRWRIASMIGTSRS-SKRLSFTDRPGLRACADDNDSEDSG 65

Query: 66  ESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFNQL 122
              +   + RT SY SEDD+D RAE FIANF+RQL+IERQVSL+L+Y R NSF+ +
Sbjct: 66  YCCN--RLARTTSYPSEDDIDKRAEMFIANFHRQLQIERQVSLELKYLRLNSFDNI 118

[Close]
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match: A0A067KMD1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07021 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.4e-21
Identity = 57/114 (50.00%), Postives = 82/114 (71.93%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELC 64
           +++G L++AVKKL F+++FN++ WRLA+    +     R+SF +  GL GC E DV    
Sbjct: 7   TVVGHLKRAVKKLNFLLSFNLRQWRLASILHNASKSRRRLSFNDRLGLHGCIE-DVESDQ 66

Query: 65  GESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSF 119
            +S+  R +Q+TRSYAS++D+D RAE FI+NF RQL +ERQVSL ++Y RGNSF
Sbjct: 67  NKSV--RALQKTRSYASQEDIDQRAEIFISNFRRQLLLERQVSLQIRYNRGNSF 117

[Close]
BLAST of Cp4.1LG04g12950 vs. TAIR10
Match: AT5G57510.1 (AT5G57510.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.3e-22
Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQS-WRLAARFGRSLSRS-LRVSFKEAPGLKGCREEDVRE 64
           SLL RLR+AV K+KF+++F + S W L    G S S S LR+SF + PGL     E+  +
Sbjct: 8   SLLNRLRQAVNKVKFVLSFKINSLWGLVPMLGSSSSSSSLRLSFNDRPGLTAAFTENEPD 67

Query: 65  LCGESISWRG-VQRTRSY--ASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGN--S 120
             G S   RG + RT SY  +S++D+D +AE FIANFYRQL+IERQ+SL+L+YC+GN  S
Sbjct: 68  STGSS---RGALYRTVSYDQSSDEDIDNKAEMFIANFYRQLKIERQISLELKYCQGNNQS 126

[Close]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match: gi|778665135|ref|XP_011648497.1| (PREDICTED: uncharacterized protein LOC101218317 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 8.2e-39
Identity = 88/120 (73.33%), Postives = 100/120 (83.33%), Query Frame = 1 

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDV 60
           M AISLLGRLRKAVKK++FMMNF++Q WRLAA  GR+ SR+LR+SF E PGLK C E+ +
Sbjct: 1   MEAISLLGRLRKAVKKIRFMMNFSIQRWRLAAMLGRTSSRNLRLSFTERPGLKACSEDII 60

Query: 61  -RELCGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
             E    S S RG+QRT SYASEDDVD RAEAFIANFYRQLRIERQVSL+LQYCRGNSF+
Sbjct: 61  MEEEQSVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRGNSFD 120

[Close]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match: gi|659107312|ref|XP_008453609.1| (PREDICTED: uncharacterized protein LOC103494271 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 6.9e-38
Identity = 88/120 (73.33%), Postives = 99/120 (82.50%), Query Frame = 1 

Query: 1   MAAISLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKG-CREED 60
           M AISLLGRLRKAVKK+KFMMNF++Q WRLAA  GR+ SR+LR+SF E PGLK  C E+ 
Sbjct: 1   MEAISLLGRLRKAVKKIKFMMNFSIQRWRLAAMLGRTSSRNLRLSFNERPGLKAACSEDI 60

Query: 61  VRELCGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
           + E    S S RG+QRT SYASEDDVD RAEAFIANFYRQLRIERQVSL+LQYCR NSF+
Sbjct: 61  IMEEEPVSSSSRGLQRTTSYASEDDVDSRAEAFIANFYRQLRIERQVSLELQYCRRNSFD 120

[Close]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match: gi|747047839|ref|XP_011069905.1| (PREDICTED: uncharacterized protein LOC105155682 [Sesamum indicum])

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-29
Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREEDVRELC 64
           SL+GRL++AVKK+KF+++FNV  W+LA+  GR+ SR  R+SF + PGL+ C EED     
Sbjct: 8   SLVGRLKRAVKKIKFLLDFNVNRWKLASMIGRTSSRKRRLSFNDRPGLRACMEEDQDPND 67

Query: 65  GESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
            +  S RG+ RT SY SEDD+D RA+AFIANF+RQLR ERQ+SL+L+Y RGNSF+
Sbjct: 68  HDPGSSRGLHRTISYPSEDDIDKRADAFIANFHRQLRFERQISLELRYYRGNSFD 122

[Close]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match: gi|747065582|ref|XP_011079433.1| (PREDICTED: uncharacterized protein LOC105162951 [Sesamum indicum])

HSP 1 Score: 122.9 bits (307), Expect = 3.9e-25
Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQSWRLAARFGR-SLSR--SLRV-SFKEAPGLKGCREEDV 64
           +LLGRL++AV+K+KF++NFNV  W+LA+  G  SLS+  S R+ SF + PGL+ C E+  
Sbjct: 4   ALLGRLKRAVRKIKFLLNFNVNRWKLASIIGTASLSKRSSARLMSFNDRPGLRACVEDSG 63

Query: 65  RELCGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSFN 120
            +    S +  G+QRT SY SEDDVD RA+AFIANFYRQL+ ERQ+SL+L+YCR NS +
Sbjct: 64  SDGSQGSSTRPGLQRTMSYPSEDDVDKRADAFIANFYRQLQYERQISLELRYCRANSLD 122

[Close]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match: gi|225446076|ref|XP_002272519.1| (PREDICTED: uncharacterized protein LOC100264996 [Vitis vinifera])

HSP 1 Score: 120.6 bits (301), Expect = 2.0e-24
Identity = 64/115 (55.65%), Postives = 84/115 (73.04%), Query Frame = 1 

Query: 5   SLLGRLRKAVKKLKFMMNFNVQSWRLAARFGRSLSRSLRVSFKEAPGLKGCREE-DVREL 64
           SLL RLR+AVKK+ F++NF +  W +A+   R+ S + R SF + PGL+GC E+ D  + 
Sbjct: 11  SLLSRLRRAVKKVGFLLNFGIHRWHVASML-RTSSETRRFSFNDRPGLRGCTEDTDSEDQ 70

Query: 65  CGESISWRGVQRTRSYASEDDVDMRAEAFIANFYRQLRIERQVSLDLQYCRGNSF 119
            G S   RG+QRT S   E+DVD RAE FIANFYRQL++ERQVSL+L+YC+GNSF
Sbjct: 71  PGSS---RGIQRTISGPCEEDVDKRAEVFIANFYRQLQMERQVSLELRYCKGNSF 121

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g12950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG04g12950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUK4_CUCSA5.7e-3973.33Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423060 PE=4 SV=1[more]
A0A061GQY6_THECC6.8e-2454.78Uncharacterized protein OS=Theobroma cacao GN=TCM_039000 PE=4 SV=1[more]
A0A059CJY9_EUCGR1.3e-2252.17Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00167 PE=4 SV=1[more]
A0A0D2R228_GOSRA1.3e-2252.59Uncharacterized protein OS=Gossypium raimondii GN=B456_004G100700 PE=4 SV=1[more]
A0A067KMD1_JATCU2.4e-2150.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07021 PE=4 SV=1[more]
BLAST of Cp4.1LG04g12950 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57510.14.3e-2251.64 unknown protein[more]
BLAST of Cp4.1LG04g12950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778665135|ref|XP_011648497.1|8.2e-3973.33PREDICTED: uncharacterized protein LOC101218317 [Cucumis sativus][more]
gi|659107312|ref|XP_008453609.1|6.9e-3873.33PREDICTED: uncharacterized protein LOC103494271 [Cucumis melo][more]
gi|747047839|ref|XP_011069905.1|1.2e-2958.26PREDICTED: uncharacterized protein LOC105155682 [Sesamum indicum][more]
gi|747065582|ref|XP_011079433.1|3.9e-2555.46PREDICTED: uncharacterized protein LOC105162951 [Sesamum indicum][more]
gi|225446076|ref|XP_002272519.1|2.0e-2455.65PREDICTED: uncharacterized protein LOC100264996 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:1903959 regulation of anion transmembrane transport
biological_process GO:0071456 cellular response to hypoxia
cellular_component GO:0005575 cellular_component
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0008308 voltage-gated anion channel activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g12950.1Cp4.1LG04g12950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 82..113
score: 4.0
NoneNo IPR availablePANTHERPTHR33098FAMILY NOT NAMEDcoord: 5..120
score: 1.9
NoneNo IPR availablePANTHERPTHR33098:SF3SUBFAMILY NOT NAMEDcoord: 5..120
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g12950Cucsa.092440Cucumber (Gy14) v1cgycpeB0182
Cp4.1LG04g12950CmaCh10G004000Cucurbita maxima (Rimu)cmacpeB092
Cp4.1LG04g12950CmaCh11G003990Cucurbita maxima (Rimu)cmacpeB153
Cp4.1LG04g12950CmoCh11G003940Cucurbita moschata (Rifu)cmocpeB129
Cp4.1LG04g12950CmoCh10G004310Cucurbita moschata (Rifu)cmocpeB068
Cp4.1LG04g12950Cla018822Watermelon (97103) v1cpewmB679
Cp4.1LG04g12950Csa1G423060Cucumber (Chinese Long) v2cpecuB637
Cp4.1LG04g12950ClCG06G013270Watermelon (Charleston Gray)cpewcgB616
Cp4.1LG04g12950CSPI01G20200Wild cucumber (PI 183967)cpecpiB641
Cp4.1LG04g12950Lsi06G011350Bottle gourd (USVL1VR-Ls)cpelsiB558
Cp4.1LG04g12950CsaV3_1G031530Cucumber (Chinese Long) v3cpecucB0797
Cp4.1LG04g12950CsGy1G020040Cucumber (Gy14) v2cgybcpeB110
Cp4.1LG04g12950Carg09020Silver-seed gourdcarcpeB0847
Cp4.1LG04g12950Carg15246Silver-seed gourdcarcpeB1106
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g12950Cp4.1LG18g06190Cucurbita pepo (Zucchini)cpecpeB360
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g12950Cucurbita pepo (Zucchini)cpecpeB129
Cp4.1LG04g12950Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG04g12950Cucumber (Gy14) v1cgycpeB0176
Cp4.1LG04g12950Cucurbita maxima (Rimu)cmacpeB195
Cp4.1LG04g12950Cucurbita maxima (Rimu)cmacpeB782
Cp4.1LG04g12950Cucurbita moschata (Rifu)cmocpeB168
Cp4.1LG04g12950Cucurbita moschata (Rifu)cmocpeB736
Cp4.1LG04g12950Wild cucumber (PI 183967)cpecpiB669
Cp4.1LG04g12950Cucumber (Chinese Long) v2cpecuB666
Cp4.1LG04g12950Bottle gourd (USVL1VR-Ls)cpelsiB530
Cp4.1LG04g12950Watermelon (Charleston Gray)cpewcgB587
Cp4.1LG04g12950Watermelon (97103) v1cpewmB677
Cp4.1LG04g12950Melon (DHL92) v3.5.1cpemeB615
Cp4.1LG04g12950Cucumber (Gy14) v2cgybcpeB233
Cp4.1LG04g12950Cucumber (Gy14) v2cgybcpeB236
Cp4.1LG04g12950Melon (DHL92) v3.6.1cpemedB727
Cp4.1LG04g12950Silver-seed gourdcarcpeB0084
Cp4.1LG04g12950Cucumber (Chinese Long) v3cpecucB0827
Cp4.1LG04g12950Cucumber (Chinese Long) v3cpecucB0830
Cp4.1LG04g12950Wax gourdcpewgoB0896