CsaV3_1G026650 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G026650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAuxin-responsive protein
Locationchr1 : 14426233 .. 14427781 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGATTGAATAATAAGGTAAAAAGAAGTTTGGCTAAGTGTTGGAGGTTCAGAAAACAATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCGTATGCCACTATCTCTTACTTTTTCTGTCTTTGATTTGGAGTTTTGATTTGATTTGGGCTGAATTTTTTTGGTTTGGTTGATTGAACAGAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGATAAAAAAGATGTCTGACATTTTGATCCACAATGGACATTATTATAAAAGTTAAAATGGGGGTTTTGATGATATGGACAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGATGAGTGATGAGTGATGAGGGTTTACCGGCGGTGGGTTGTCAGAGAATCGGATGCTGTCTAATTAAAATATATCTCTTATGTTTTTTTGTTTTAAAATAGCAGTTTTTTAAGTTTGAATGACTGTATATGTAATGATATATTGAGAAAACTTAAACTTTAGATTATCTTTTTGACCTTATTTGTTTTTTTGTTGGGTAATACATGTTTAGGGATCTTAAATATATTAATTAATAAAAATAAAATATTATTACAATATATGTATTATATATAAATATATATATATATATGCTTATGCTT

mRNA sequence

ATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA

Coding sequence (CDS)

ATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA

Protein sequence

MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLSNFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: KGN65132.1 (hypothetical protein Csa_1G231530 [Cucumis sativus])

HSP 1 Score: 549.3 bits (1414), Expect = 8.2e-153
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0

Query: 1   MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS 60
           MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS
Sbjct: 1   MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS 60

Query: 61  NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN 120
           NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN
Sbjct: 61  NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN 120

Query: 121 HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP 180
           HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP
Sbjct: 121 HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP 180

Query: 181 PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR 240
           PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR
Sbjct: 181 PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR 240

Query: 241 EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300
           EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 241 EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_004150206.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0

Query: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60

Query: 143 WNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAVIR 202
           WNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 61  WNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAVIR 120

Query: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE
Sbjct: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180

Query: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 301
           GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 218

BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_008443966.1 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 7.3e-93
Identity = 204/220 (92.73%), Postives = 205/220 (93.18%), Query Frame = 0

Query: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 142
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 143 LWNDHPN-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAV 202
           LWNDHPN  XXXXXXXXXXXXXXXXXXXXXXXXX    WPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 203 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 262
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 263 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 301
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_022987761.1 (uncharacterized protein LOC111485214 isoform X2 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 6.9e-75
Identity = 183/302 (60.60%), Postives = 213/302 (70.53%), Query Frame = 0

Query: 1   MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTP-----ARTTPLLLLN 60
           MWVR KE + +WVGQRQSIDTDI D F  S QHFVP I IL P P     AR +      
Sbjct: 1   MWVRIKEQQGSWVGQRQSIDTDISDHFRLSIQHFVP-IHILVPLPHVCTHARPSSAPFKP 60

Query: 61  PHPLSNFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLV 120
           P P   F  S+     T   ++  P  MAMELQLGLAL PTNP KPF LNTH+     L 
Sbjct: 61  PPP---FFPSSP----TNPHVSSIP-SMAMELQLGLALFPTNPTKPFHLNTHHRALPCLD 120

Query: 121 FDSINHKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           FDSI+ KKR   +D  + FR+TLPLLLWNDHPND   XXXXXXXXXXXXXXXXX      
Sbjct: 121 FDSISGKKRPLDIDPSSAFRRTLPLLLWNDHPND-GDXXXXXXXXXXXXXXXXXKEQEIE 180

Query: 181 XXXWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIAR 240
              WPPLKKRRK+LF+++ + R  VIRRPA++N G   R L+ NNS YVKVKMEGVGI R
Sbjct: 181 LVGWPPLKKRRKTLFVQKRIRRAVVIRRPAMENGGGVHRELNSNNSLYVKVKMEGVGIGR 240

Query: 241 KVDLREHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINL 298
           KVD+R+HH FDALRATLM MFD+ +S+GY LT+Q+T G+WLLA++VTWR+FI TVQRI L
Sbjct: 241 KVDIRQHHCFDALRATLMNMFDKPDSDGYNLTYQDTDGDWLLADDVTWRDFIRTVQRIKL 292

BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_022960765.1 (uncharacterized protein LOC111461467 isoform X2 [Cucurbita moschata])

HSP 1 Score: 253.8 bits (647), Expect = 7.2e-64
Identity = 128/215 (59.53%), Postives = 153/215 (71.16%), Query Frame = 0

Query: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60

Query: 143 WNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAVIR 202
           WNDHPN+                             WPPLKKRRK+LF+++ +GR   IR
Sbjct: 61  WNDHPNN-GDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120

Query: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262
           RPA++NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MFD+ +S+
Sbjct: 121 RPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSD 180

Query: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEK 298
           GY LT+Q+T G+WLLAE+VTWR+FI TVQRI LEK
Sbjct: 181 GYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEK 214

BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29)

HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0

Query: 221 SRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDE-----TNSEGYKLTFQNTKGEW 280
           S YVKVKM+GV IARKVD++  +S+++L  +L+ MF E          Y  TFQ  +G+W
Sbjct: 159 SMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDW 218

Query: 281 LLAENVTWRNFIGTVQRINL 296
           LL  +VTW+ F  +V RI++
Sbjct: 219 LLRGDVTWKIFAESVHRISI 238

BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0

Query: 179 WPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKM 238
           WPP+   R          K+   +EG G + V++   +K D        +    +VKV M
Sbjct: 73  WPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVSMKVNPKVQGLGFVKVNM 132

Query: 239 EGVGIARKVDLREHHSFDALRATLMKMFDE----------------TNSEGYKLTFQNTK 296
           +GVGI RKVD+R H S++ L  TL +MF                    S  + LT+++ +
Sbjct: 133 DGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKE 192

BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT2G33310.2 (auxin-induced protein 13)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 223 YVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN-------------------SEG 282
           ++KV M+GV I RKVDL  H S++ L  TL  MF  TN                   S  
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 283 YKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 300
           + LT+++ +G+W+L  +V WR FI +V+R+ + K S
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 226

BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11
Identity = 41/148 (27.70%), Postives = 68/148 (45.95%), Query Frame = 0

Query: 179 WPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGI 238
           WPP++  R +  + +            I +   KN         + NS +VKV M+G+ I
Sbjct: 92  WPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDGIPI 151

Query: 239 ARKVDLREHHSFDALRATLMKMFDE----------------------TNSEGYKLTFQNT 298
            RK+DL  H  +++L  TL +MF +                        S G  LT+++ 
Sbjct: 152 GRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDK 211

Query: 299 KGEWLLAENVTWRNFIGTVQRINLEKKS 300
           +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 212 EGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT1G04100.1 (indoleacetic acid-induced protein 10)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10
Identity = 51/161 (31.68%), Postives = 74/161 (45.96%), Query Frame = 0

Query: 179 WPPLKKRR--------KSLFMKEGVG-------RRAVIRRPAVKNDGVFWRGLDLNNSRY 238
           WPPL+  R        KSL  + G+         ++V+   A KND   +       S  
Sbjct: 97  WPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVV--VAAKNDDACFI-KSSRTSML 156

Query: 239 VKVKMEGVGIARKVDLREHHSFDALRATLMKMF-------DETNSEGYK----------- 298
           VKV M+GV I RKVDL    S+ AL  TL  MF         +N++GYK           
Sbjct: 157 VKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTSKLL 216

Query: 299 -------LTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 300
                  +T+Q+  G+W+L  +V W+ F+G+V R+ + K S
Sbjct: 217 DGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTS 254

BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q93WC4|IAA29_ARATH (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 7.4e-12
Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0

Query: 221 SRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDE-----TNSEGYKLTFQNTKGEW 280
           S YVKVKM+GV IARKVD++  +S+++L  +L+ MF E          Y  TFQ  +G+W
Sbjct: 159 SMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDW 218

Query: 281 LLAENVTWRNFIGTVQRINL 296
           LL  +VTW+ F  +V RI++
Sbjct: 219 LLRGDVTWKIFAESVHRISI 238

BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38830|IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0

Query: 179 WPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKM 238
           WPP+   R          K+   +EG G + V++   +K D        +    +VKV M
Sbjct: 73  WPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVSMKVNPKVQGLGFVKVNM 132

Query: 239 EGVGIARKVDLREHHSFDALRATLMKMFDE----------------TNSEGYKLTFQNTK 296
           +GVGI RKVD+R H S++ L  TL +MF                    S  + LT+++ +
Sbjct: 133 DGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKE 192

BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38831|IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.4e-10
Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 223 YVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN-------------------SEG 282
           ++KV M+GV I RKVDL  H S++ L  TL  MF  TN                   S  
Sbjct: 131 FIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSE 190

Query: 283 YKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 300
           + LT+++ +G+W+L  +V WR FI +V+R+ + K S
Sbjct: 191 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMKTS 226

BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38829|IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10
Identity = 41/148 (27.70%), Postives = 68/148 (45.95%), Query Frame = 0

Query: 179 WPPLKKRRKSLFMKEGVGR-----RAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGI 238
           WPP++  R +  + +            I +   KN         + NS +VKV M+G+ I
Sbjct: 92  WPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDGIPI 151

Query: 239 ARKVDLREHHSFDALRATLMKMFDE----------------------TNSEGYKLTFQNT 298
            RK+DL  H  +++L  TL +MF +                        S G  LT+++ 
Sbjct: 152 GRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTYEDK 211

Query: 299 KGEWLLAENVTWRNFIGTVQRINLEKKS 300
           +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 212 EGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q6K846|IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 0

Query: 221 SRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSEGYK--------------L 280
           + YVKVK EG  I RKVDL  H S+D L ATL +MF   + +G K              +
Sbjct: 92  ANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGPVV 151

Query: 281 TFQNTKGEWLLAENVTWRNFIGTVQRINL 296
           T+++  G+W+L  +V W +F  +V+R+ +
Sbjct: 152 TYEDGDGDWMLVGDVPWDDFARSVKRLKI 180

BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A0A0LWC5|A0A0A0LWC5_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 5.4e-153
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0

Query: 1   MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS 60
           MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS
Sbjct: 1   MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLS 60

Query: 61  NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN 120
           NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN
Sbjct: 61  NFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSIN 120

Query: 121 HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP 180
           HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP
Sbjct: 121 HKKRSRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWP 180

Query: 181 PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR 240
           PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR
Sbjct: 181 PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR 240

Query: 241 EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300
           EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 241 EHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A1S3B8T8|A0A1S3B8T8_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 4.9e-93
Identity = 204/220 (92.73%), Postives = 205/220 (93.18%), Query Frame = 0

Query: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 142
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 143 LWNDHPN-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKKRRKSLFMKEGVGRRAV 202
           LWNDHPN  XXXXXXXXXXXXXXXXXXXXXXXXX    WPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 203 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 262
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 263 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 301
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A2R3XZ44|A0A2R3XZ44_9ROSI (Auxin-responsive protein OS=Carya cathayensis OX=139927 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 6.5e-29
Identity = 94/243 (38.68%), Postives = 117/243 (48.15%), Query Frame = 0

Query: 85  MELQLGLALIPTNPIKPFDLNTHNNNPISLV--------------FDSINHKKRSRHLD- 144
           MELQLGLAL P+NP K FDLN   + P  +                + IN   R R  D 
Sbjct: 1   MELQLGLAL-PSNPSKGFDLNYFASEPKEIAVSNRSFTVASSCTDINDINDNNRKRSFDQ 60

Query: 145 -----SPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPLKK 204
                + +T  +TLPLLLWN HPN+                             WPP++ 
Sbjct: 61  TFENETDSTVPRTLPLLLWNLHPNEEDDPKDLENHSLVTFNDKKDGDNGDGLVGWPPIRS 120

Query: 205 R-RKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHH 264
           R R      E  G        AV  +  F  G+  +NS YVKVKMEGV IARK+DL  HH
Sbjct: 121 RWRNKRLCHENNG--------AVGLENGFACGIRGSNSTYVKVKMEGVPIARKIDLGLHH 180

Query: 265 SFDALRATLMKMF-------DETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLE 300
           SF  L  TLM MF        + +S  YKL +Q+ +G+WL AE+V+WR F  +VQRI L 
Sbjct: 181 SFQTLTETLMDMFGQWWLETGQKDSNQYKLAYQDREGDWLFAEDVSWRTFSRSVQRIKLL 234

BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A2K1X018|A0A2K1X018_POPTR (Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28
Identity = 90/241 (37.34%), Postives = 122/241 (50.62%), Query Frame = 0

Query: 85  MELQLGLALIPTNPIKPFDLNTHNNNPISLV-------------FDSINHKKR------- 144
           MELQLGL L     +K  DLN++ + P  L+               + N KKR       
Sbjct: 1   MELQLGLGLPSEKTMKGLDLNSYVSEPKGLLGSGQLQLGQYSWFSTNANDKKRSFIDAFE 60

Query: 145 --SRHLDSPATFRQTLPLLLWNDHPNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPPL 204
             S + D P    QTLPLL+WN+ PND                             WPP+
Sbjct: 61  ESSGNEDGP----QTLPLLVWNNQPNDEDDFPKDLDNHSSNSCASNNDGESDWIVGWPPI 120

Query: 205 KKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSR--YVKVKMEGVGIARKVDLR 264
           K ++K L  +     RA+    AV N    +       S+  Y+KVKMEGVGIARK+D+ 
Sbjct: 121 KFKKKKLSRQSS---RALEINRAVDNG---YEDCQARTSKYMYIKVKMEGVGIARKIDVS 180

Query: 265 EHHSFDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKK 300
            HHSF  L+ TL+ MF   + NS  Y+LT+Q+ +G+WLLAE+V WRNF+GTVQ + L ++
Sbjct: 181 LHHSFPTLKQTLLDMFGICQENSSNYRLTYQDREGDWLLAEDVPWRNFLGTVQLLKLMRR 231

BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|B9IMW1|B9IMW1_POPTR (Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27
Identity = 90/242 (37.19%), Postives = 122/242 (50.41%), Query Frame = 0

Query: 85  MELQLGLALIPTNPIKPFDLNTHNNNPISLV-------------FDSINHKKR------- 144
           MELQLGL L     +K  DLN++ + P  L+               + N KKR       
Sbjct: 1   MELQLGLGLPSEKTMKGLDLNSYVSEPKGLLGSGQLQLGQYSWFSTNANDKKRSFIDAFE 60

Query: 145 --SRHLDSPATFRQTLPLLLWNDHPND-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWPP 204
             S + D P    QTLPLL+WN+ PND                              WPP
Sbjct: 61  ESSGNEDGP----QTLPLLVWNNQPNDEDDFPKDLDNHSSNSCASNKSDGESDWIVGWPP 120

Query: 205 LKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSR--YVKVKMEGVGIARKVDL 264
           +K ++K L  +     RA+    AV N    +       S+  Y+KVKMEGVGIARK+D+
Sbjct: 121 IKFKKKKLSRQSS---RALEINRAVDNG---YEDCQARTSKYMYIKVKMEGVGIARKIDV 180

Query: 265 REHHSFDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEK 300
             HHSF  L+ TL+ MF   + NS  Y+LT+Q+ +G+WLLAE+V WRNF+GTVQ + L +
Sbjct: 181 SLHHSFPTLKQTLLDMFGICQENSSNYRLTYQDREGDWLLAEDVPWRNFLGTVQLLKLMR 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65132.18.2e-153100.00hypothetical protein Csa_1G231530 [Cucumis sativus][more]
XP_004150206.22.3e-102100.00PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus][more]
XP_008443966.17.3e-9392.73PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo][more]
XP_022987761.16.9e-7560.60uncharacterized protein LOC111485214 isoform X2 [Cucurbita maxima][more]
XP_022960765.17.2e-6459.53uncharacterized protein LOC111461467 isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT4G32280.14.1e-1345.00indole-3-acetic acid inducible 29[more]
AT1G04550.21.2e-1230.77AUX/IAA transcriptional regulator family protein[more]
AT2G33310.21.3e-1136.46auxin-induced protein 13[more]
AT4G28640.25.0e-1127.70indole-3-acetic acid inducible 11[more]
AT1G04100.11.9e-1031.68indoleacetic acid-induced protein 10[more]
Match NameE-valueIdentityDescription
sp|Q93WC4|IAA29_ARATH7.4e-1245.00Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=... [more]
sp|Q38830|IAA12_ARATH2.2e-1130.77Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=... [more]
sp|Q38831|IAA13_ARATH2.4e-1036.46Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=... [more]
sp|Q38829|IAA11_ARATH9.0e-1027.70Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=... [more]
sp|Q6K846|IAA9_ORYSJ2.0e-0937.08Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LWC5|A0A0A0LWC5_CUCSA5.4e-153100.00Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1[more]
tr|A0A1S3B8T8|A0A1S3B8T8_CUCME4.9e-9392.73Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1[more]
tr|A0A2R3XZ44|A0A2R3XZ44_9ROSI6.5e-2938.68Auxin-responsive protein OS=Carya cathayensis OX=139927 PE=2 SV=1[more]
tr|A0A2K1X018|A0A2K1X018_POPTR2.5e-2837.34Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE... [more]
tr|B9IMW1|B9IMW1_POPTR6.0e-2737.19Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
IPR033389AUX/IAA_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0009733 response to auxin
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0010033 response to organic substance
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G026650.1CsaV3_1G026650.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 217..300
e-value: 1.1E-18
score: 69.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..163
NoneNo IPR availablePANTHERPTHR31734:SF44AUXIN-RESPONSIVE PROTEIN IAA29coord: 85..297
NoneNo IPR availableSUPERFAMILYSSF54277CAD & PB1 domainscoord: 216..296
IPR033389AUX/IAA domainPFAMPF02309AUX_IAAcoord: 155..258
e-value: 1.3E-16
score: 61.1
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 85..297
IPR000270PB1 domainPROSITEPS51745PB1coord: 221..298
score: 17.797