CsaV3_1G026650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGGATTGAATAATAAGGTAAAAAGAAGTTTGGCTAAGTGTTGGAGGTTCAGAAAACAATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCGTATGCCACTATCTCTTACTTTTTCTGTCTTTGATTTGGAGTTTTGATTTGATTTGGGCTGAATTTTTTTGGTTTGGTTGATTGAACAGAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGATAAAAAAGATGTCTGACATTTTGATCCACAATGGACATTATTATAAAAGTTAAAATGGGGGTTTTGATGATATGGACAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGATGAGTGATGAGTGATGAGGGTTTACCGGCGGTGGGTTGTCAGAGAATCGGATGCTGTCTAATTAAAATATATCTCTTATGTTTTTTTGTTTTAAAATAGCAGTTTTTTAAGTTTGAATGACTGTATATGTAATGATATATTGAGAAAACTTAAACTTTAGATTATCTTTTTGACCTTATTTGTTTTTTTGTTGGGTAATACATGTTTAGGGATCTTAAATATATTAATTAATAAAAATAAAATATTATTACAATATATGTATTATATATAAATATATATATATATATGCTTATGCTT ATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA ATGTGGGTAAGAGAAAAGGAACATGAGAGCAATTGGGTCGGCCAAAGGCAGAGCATTGATACGGACATCTTAGACGTTTTTCCGTTCTCTTTCCAACACTTTGTCCCCACCATCCTCATTCTTTGTCCCACACCCGCACGCACAACCCCTCTTCTCCTTTTAAACCCACATCCTCTTTCCAATTTCCATAATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGCGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA MWVREKEHESNWVGQRQSIDTDILDVFPFSFQHFVPTILILCPTPARTTPLLLLNPHPLSNFHNSNSSFVLTFSSINLFPYLMAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: KGN65132.1 (hypothetical protein Csa_1G231530 [Cucumis sativus]) HSP 1 Score: 549.3 bits (1414), Expect = 8.2e-153 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_004150206.2 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus]) HSP 1 Score: 381.7 bits (979), Expect = 2.3e-102 Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_008443966.1 (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo]) HSP 1 Score: 350.1 bits (897), Expect = 7.3e-93 Identity = 204/220 (92.73%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_022987761.1 (uncharacterized protein LOC111485214 isoform X2 [Cucurbita maxima]) HSP 1 Score: 290.4 bits (742), Expect = 6.9e-75 Identity = 183/302 (60.60%), Postives = 213/302 (70.53%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. NCBI nr
Match: XP_022960765.1 (uncharacterized protein LOC111461467 isoform X2 [Cucurbita moschata]) HSP 1 Score: 253.8 bits (647), Expect = 7.2e-64 Identity = 128/215 (59.53%), Postives = 153/215 (71.16%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT4G32280.1 (indole-3-acetic acid inducible 29) HSP 1 Score: 72.8 bits (177), Expect = 4.1e-13 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein) HSP 1 Score: 71.2 bits (173), Expect = 1.2e-12 Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT2G33310.2 (auxin-induced protein 13) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-11 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT4G28640.2 (indole-3-acetic acid inducible 11) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11 Identity = 41/148 (27.70%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TAIR10
Match: AT1G04100.1 (indoleacetic acid-induced protein 10) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-10 Identity = 51/161 (31.68%), Postives = 74/161 (45.96%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q93WC4|IAA29_ARATH (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana OX=3702 GN=IAA29 PE=1 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 7.4e-12 Identity = 36/80 (45.00%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38830|IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana OX=3702 GN=IAA12 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.2e-11 Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38831|IAA13_ARATH (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 2.4e-10 Identity = 35/96 (36.46%), Postives = 52/96 (54.17%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q38829|IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana OX=3702 GN=IAA11 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 9.0e-10 Identity = 41/148 (27.70%), Postives = 68/148 (45.95%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. Swiss-Prot
Match: sp|Q6K846|IAA9_ORYSJ (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.0e-09 Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A0A0LWC5|A0A0A0LWC5_CUCSA (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_1G231530 PE=3 SV=1) HSP 1 Score: 549.3 bits (1414), Expect = 5.4e-153 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A1S3B8T8|A0A1S3B8T8_CUCME (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103487427 PE=3 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 4.9e-93 Identity = 204/220 (92.73%), Postives = 205/220 (93.18%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A2R3XZ44|A0A2R3XZ44_9ROSI (Auxin-responsive protein OS=Carya cathayensis OX=139927 PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 6.5e-29 Identity = 94/243 (38.68%), Postives = 117/243 (48.15%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|A0A2K1X018|A0A2K1X018_POPTR (Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28 Identity = 90/241 (37.34%), Postives = 122/241 (50.62%), Query Frame = 0
BLAST of CsaV3_1G026650 vs. TrEMBL
Match: tr|B9IMW1|B9IMW1_POPTR (Auxin-responsive protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G127800v3 PE=3 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 6.0e-27 Identity = 90/242 (37.19%), Postives = 122/242 (50.41%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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