CSPI01G16780 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G16780
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAuxin-responsive protein
LocationChr1 : 12429382 .. 12430442 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCAAATTCATCTTTTGTTCTCACATTTTCTTCAATCAATCTCTTCCCCTACCTAATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGGGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCGTATGCCACTATCTCTTACTTTTTCTGTCTTTGATTTGGAGTTTTGATTTGATTTGGGCTGAATTTTTTTTGGTTTGGTTGATTGAACAGAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGGTGAGCTTGTGTTTGAAACATACATGCATCTAATGATCACTCAAACATTAACCCACTGTTTAATGTTACAACTTCAAAACACATTTCAAGCGATTTTCAAATTGTGTCTGTTAACAGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGTAAAGATAAAAAAGATGTCTGACATTTTGATCCACAGTGGACATTATTATAAAAGTTAAAATGGGGGTTTTGATGATATGGACAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGATGAGTGATGAGTGATGAGGGTTTACCGGCGGTGGGTTGTCAGAGAATCGGATGC

mRNA sequence

ATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGGGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA

Coding sequence (CDS)

ATGGCTATGGAGCTTCAACTTGGTCTTGCTTTAATCCCCACCAATCCCATCAAACCCTTCGACTTAAACACCCATAACAACAATCCCATTTCCTTGGTTTTTGATTCTATCAATCACAAAAAGCGTTCTCGTCATCTCGACTCCCCTGCGACATTTCGTCAAACACTTCCTCTGCTTCTTTGGAATGACCATCCCAATGATGGGGATGACGATGACCCTAATGACCCCCATTCTGCCTCCTCTAATGATTCAGACGAGGAGGAGGAAGAGGAGAATGGGCTTGTGGGATGGCCGCCGCTTAAGAAGAGGAGGAAGAGTCTTTTTATGAAGGAAGGGGTTGGACGGAGAGCGGTGATCCGCCGTCCAGCGGTGAAGAACGACGGCGTGTTTTGGAGAGGATTGGATTTGAATAATTCTCGATACGTGAAAGTGAAGATGGAGGGAGTGGGAATTGCTAGGAAGGTTGATTTGAGGGAACATCATTCTTTTGATGCGCTTAGAGCTACTTTGATGAAGATGTTTGATGAAACGAATTCGGAGGGTTACAAACTCACTTTCCAGAATACCAAGGGTGAATGGTTACTTGCTGAGAACGTAACTTGGAGGAATTTCATCGGAACTGTTCAACGGATCAATCTGGAAAAGAAGTCCGGGTGA
Homology
[Close]
BLAST of CSPI01G16780 vs. Swiss-Prot
Match: IAA29_ARATH (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana GN=IAA29 PE=2 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 9.3e-17
Identity = 79/252 (31.35%), Postives = 113/252 (44.84%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIK---PFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF------- 62
           MEL LGL+L P    K    FDLN H         +       +  L   ATF       
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKH------CAIEGAASCLGTEKLRFEATFGLGNVEE 60

Query: 63  RQTLP---LLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFM 122
              +P   L   N  PN+ D+D    P  + S+   ++EEE + +VGWPP+K    +  +
Sbjct: 61  NCYMPKQRLFALNGQPNEEDED----PLESESSIVYDDEEENSEVVGWPPVK----TCMI 120

Query: 123 KEGV-----------------GRRAVIRRPAVKNDGVFWRG------LDLNNSRYVKVKM 182
           K G                  GRR       + N      G      +   +S YVKVKM
Sbjct: 121 KYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKM 180

Query: 183 EGVGIARKVDLREHHSFDALRATLMKMFDE-----TNSEGYKLTFQNTKGEWLLAENVTW 214
           +GV IARKVD++  +S+++L  +L+ MF E          Y  TFQ  +G+WLL  +VTW
Sbjct: 181 DGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTW 238

[Close]
BLAST of CSPI01G16780 vs. Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-12
Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 1 

Query: 80  SSNDSDEEEEEENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGV 139
           SS+         + +VGWPP+   R          K+   +EG G + V++   +K D  
Sbjct: 56  SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVS 115

Query: 140 FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDE------------- 199
                 +    +VKV M+GVGI RKVD+R H S++ L  TL +MF               
Sbjct: 116 MKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPL 175

Query: 200 ---TNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINL 214
                S  + LT+++ +G+W+L  +V WR FI +V+R+ +
Sbjct: 176 RLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]
BLAST of CSPI01G16780 vs. Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 1 

Query: 94  LVGWPPLKKRRKSLFMKEGVGRRAV-----IRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMFDE----------------------TNSEGYKLTF 213
           + I RK+DL  H  +++L  TL +MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 214 QNTKGEWLLAENVTWRNFIGTVQRINLEKKS 218
           ++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]
BLAST of CSPI01G16780 vs. Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 42/148 (28.38%), Postives = 69/148 (46.62%), Query Frame = 1 

Query: 93  GLVGWPPLKK-RRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSR-----YVKVKM 152
           G+VGWPP+++ R  SLF +          +    N+    +  +    +     +VKV M
Sbjct: 111 GVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNM 170

Query: 153 EGVGIARKVDLREHHSFDALRATLMKMFDET-----------------NSEGYKLTFQNT 212
           +G  I RKVDL  H S+  L   L  MF +                  NS  Y+LT+++ 
Sbjct: 171 DGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDR 230

Query: 213 KGEWLLAENVTWRNFIGTVQRINLEKKS 218
            G+W+L  +V W  F+ +V+R+ + + S
Sbjct: 231 DGDWMLVGDVPWEMFVSSVKRLRIMRTS 258

[Close]
BLAST of CSPI01G16780 vs. Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.5e-11
Identity = 42/148 (28.38%), Postives = 69/148 (46.62%), Query Frame = 1 

Query: 93  GLVGWPPLKK-RRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSR-----YVKVKM 152
           G+VGWPP+++ R  SLF +          +    N+    +  +    +     +VKV M
Sbjct: 111 GVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNM 170

Query: 153 EGVGIARKVDLREHHSFDALRATLMKMFDET-----------------NSEGYKLTFQNT 212
           +G  I RKVDL  H S+  L   L  MF +                  NS  Y+LT+++ 
Sbjct: 171 DGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDR 230

Query: 213 KGEWLLAENVTWRNFIGTVQRINLEKKS 218
            G+W+L  +V W  F+ +V+R+ + + S
Sbjct: 231 DGDWMLVGDVPWEMFVSSVKRLRIMRTS 258

[Close]
BLAST of CSPI01G16780 vs. TrEMBL
Match: A0A0A0LWC5_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 3.3e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262

Query: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 219
           GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]
BLAST of CSPI01G16780 vs. TrEMBL
Match: M5VWY4_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010871mg PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 106/237 (44.73%), Postives = 137/237 (57.81%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIKPFDLNT--HNNNPISLVFDSINHKKRSRHLD------------S 62
           MELQLGLAL P+NPIK FDLN   +    ++ V   I++  + R  D            S
Sbjct: 1   MELQLGLAL-PSNPIKGFDLNNFGYEAKEVAAVSKHIHYDNKKRSFDQAFDEHNNNTSRS 60

Query: 63  PATFRQTLPLLLWNDH-PNDGD-DDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKS 122
            A   +TLPL LWN++ PN  D DDDP+     +S  +   + + +GLVGWPP+K  RK 
Sbjct: 61  TAAVPRTLPLFLWNNNQPNHHDKDDDPDKHQDNNSRFTIVIKNDGDGLVGWPPIKSWRKE 120

Query: 123 LFM---KEGVGRRAVIRRPAVKNDGVFWRGL-DLNNSRYVKVKMEGVGIARKVDLREHHS 182
                   G G R V         G   RG  + ++S +VKVKMEGVGIARK+DL  HHS
Sbjct: 121 ACFHNHNHGHGHRTV-----GNGSGGGGRGSSNHHHSTFVKVKMEGVGIARKIDLSLHHS 180

Query: 183 FDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 218
           F  L  TLM MFD  + +S  YKLT+Q+ +G+WLLA +V WR FI +VQR+ L KKS
Sbjct: 181 FRTLADTLMDMFDKCQMDSNNYKLTYQDREGDWLLARDVPWRTFIRSVQRLKLVKKS 231

[Close]
BLAST of CSPI01G16780 vs. TrEMBL
Match: B9IMW1_POPTR (Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0018s12790g PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.9e-33
Identity = 100/242 (41.32%), Postives = 139/242 (57.44%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIKPFDLNTHNNNPISL-------------VFDSINHKKRS------ 62
           MELQLGL L     +K  DLN++ + P  L                + N KKRS      
Sbjct: 1   MELQLGLGLPSEKTMKGLDLNSYVSEPKGLLGSGQLQLGQYSWFSTNANDKKRSFIDAFE 60

Query: 63  ---RHLDSPATFRQTLPLLLWNDHPNDGDDDDPN-DPHSASSNDSDEEEEEENGLVGWPP 122
               + D P    QTLPLL+WN+ PND DD   + D HS++S  S++ + E + +VGWPP
Sbjct: 61  ESSGNEDGP----QTLPLLVWNNQPNDEDDFPKDLDNHSSNSCASNKSDGESDWIVGWPP 120

Query: 123 LKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRY--VKVKMEGVGIARKVDL 182
           +K ++K L  +     RA+    AV N    +       S+Y  +KVKMEGVGIARK+D+
Sbjct: 121 IKFKKKKLSRQSS---RALEINRAVDNG---YEDCQARTSKYMYIKVKMEGVGIARKIDV 180

Query: 183 REHHSFDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEK 218
             HHSF  L+ TL+ MF   + NS  Y+LT+Q+ +G+WLLAE+V WRNF+GTVQ + L +
Sbjct: 181 SLHHSFPTLKQTLLDMFGICQENSSNYRLTYQDREGDWLLAEDVPWRNFLGTVQLLKLMR 232

[Close]
BLAST of CSPI01G16780 vs. TrEMBL
Match: W9SZ29_9ROSA (Auxin-responsive protein OS=Morus notabilis GN=L484_008968 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.0e-30
Identity = 98/237 (41.35%), Postives = 131/237 (55.27%), Query Frame = 1 

Query: 3   MELQLGLALIPTNP----IKPFDLNTHNNNPISLVFDSINHKKRSR-------------- 62
           MELQLGLAL+P+N     ++ FDLN       S     I   K+ R              
Sbjct: 1   MELQLGLALLPSNSSLDHVQGFDLNKEGLIIGSNHHHEIRSNKKPRFCQAFLENNDDDDD 60

Query: 63  ---HLDSPATFRQTLPLLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLK 122
              H DS     +TLPLL WN+ PN+GD+D   D H  S+  S  + E E+G+VGWPP+K
Sbjct: 61  DHHHQDS---LPKTLPLLCWNNQPNEGDNDPYRDLHKYSTF-SLSKNEGEDGVVGWPPIK 120

Query: 123 KRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHH 182
            RRK L     VG R+ I R           G+ ++   YVKVKMEG+ IARK+DL  H 
Sbjct: 121 SRRKRLCCN--VGDRSEINRTVENGCSC---GMRVSKFMYVKVKMEGMAIARKIDLSLHS 180

Query: 183 SFDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKK 217
            F  L  TLM MF   + +S  +KLT+Q+ +G+WLLA++V WR FI +VQR+ L ++
Sbjct: 181 CFGTLTDTLMDMFGKCQEDSGNHKLTYQDREGDWLLAQDVPWRTFIRSVQRLKLLRR 228

[Close]
BLAST of CSPI01G16780 vs. TrEMBL
Match: I3NNW8_GOSHI (Auxin-responsive protein OS=Gossypium hirsutum GN=Aux9 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.9e-29
Identity = 103/261 (39.46%), Postives = 136/261 (52.11%), Query Frame = 1 

Query: 3   MELQLGLALIPTN--PIKPFDLNTHNN-------------------NPISLVFDSINH-- 62
           MELQLGLAL P    PI+ FDLN++ N                    P     ++I+H  
Sbjct: 1   MELQLGLALPPPPLIPIETFDLNSYGNYETREALGSNALSWPLLKLGPADNDINNIHHHN 60

Query: 63  ----------------KKRS----RHLDSPATFRQTLPLLLWNDHPNDGDDDDPNDPHSA 122
                           KKRS       D      +TL LLLW + PND DDD  N  H  
Sbjct: 61  SSSSSSSSSSGGGAGCKKRSFDEAPFFDEKRNVPKTLHLLLWTNQPNDEDDDPSNVLHEN 120

Query: 123 SSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNS 182
           SS+   + + E  GLVGWPP+K  RK +  +   G     R P V+N G+  R    + S
Sbjct: 121 SSSAIFKNDGE--GLVGWPPVKTWRKKVHHQIPNGGAENNRLPKVEN-GIGGRA---SKS 180

Query: 183 RYVKVKMEGVGIARKVDLREHHSFDALRATLMKMF--DETNSEGYKLTFQNTKGEWLLAE 219
            YVKVKMEGV IARK+DL  HHSF+ L  TLM+MF   + N + +KLT+Q+ +G+WLLAE
Sbjct: 181 TYVKVKMEGVPIARKIDLSVHHSFEGLTNTLMRMFGISDGNPKIFKLTYQDREGDWLLAE 240

[Close]
BLAST of CSPI01G16780 vs. TAIR10
Match: AT4G32280.1 (AT4G32280.1 indole-3-acetic acid inducible 29)

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-18
Identity = 79/252 (31.35%), Postives = 113/252 (44.84%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIK---PFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF------- 62
           MEL LGL+L P    K    FDLN H         +       +  L   ATF       
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKH------CAIEGAASCLGTEKLRFEATFGLGNVEE 60

Query: 63  RQTLP---LLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFM 122
              +P   L   N  PN+ D+D    P  + S+   ++EEE + +VGWPP+K    +  +
Sbjct: 61  NCYMPKQRLFALNGQPNEEDED----PLESESSIVYDDEEENSEVVGWPPVK----TCMI 120

Query: 123 KEGV-----------------GRRAVIRRPAVKNDGVFWRG------LDLNNSRYVKVKM 182
           K G                  GRR       + N      G      +   +S YVKVKM
Sbjct: 121 KYGSYHHRHIRNHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKM 180

Query: 183 EGVGIARKVDLREHHSFDALRATLMKMFDE-----TNSEGYKLTFQNTKGEWLLAENVTW 214
           +GV IARKVD++  +S+++L  +L+ MF E          Y  TFQ  +G+WLL  +VTW
Sbjct: 181 DGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGDWLLRGDVTW 238

[Close]
BLAST of CSPI01G16780 vs. TAIR10
Match: AT1G04550.2 (AT1G04550.2 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.3e-13
Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 1 

Query: 80  SSNDSDEEEEEENGLVGWPPLKKRR----------KSLFMKEGVGRRAVIRRPAVKNDGV 139
           SS+         + +VGWPP+   R          K+   +EG G + V++   +K D  
Sbjct: 56  SSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEEGDGEKKVVKNDELK-DVS 115

Query: 140 FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDE------------- 199
                 +    +VKV M+GVGI RKVD+R H S++ L  TL +MF               
Sbjct: 116 MKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPL 175

Query: 200 ---TNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINL 214
                S  + LT+++ +G+W+L  +V WR FI +V+R+ +
Sbjct: 176 RLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]
BLAST of CSPI01G16780 vs. TAIR10
Match: AT4G28640.2 (AT4G28640.2 indole-3-acetic acid inducible 11)

HSP 1 Score: 71.2 bits (173), Expect = 8.7e-13
Identity = 43/151 (28.48%), Postives = 71/151 (47.02%), Query Frame = 1 

Query: 94  LVGWPPLKKRRKSLFMKEGVGRRAV-----IRRPAVKNDGVFWRGLDLNNSRYVKVKMEG 153
           +VGWPP++  R +  + +            I +   KN         + NS +VKV M+G
Sbjct: 89  VVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRS---DSTKMRNSMFVKVTMDG 148

Query: 154 VGIARKVDLREHHSFDALRATLMKMFDE----------------------TNSEGYKLTF 213
           + I RK+DL  H  +++L  TL +MF +                        S G  LT+
Sbjct: 149 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 208

Query: 214 QNTKGEWLLAENVTWRNFIGTVQRINLEKKS 218
           ++ +G+W+L  +V W  FIG+V+R+ + K S
Sbjct: 209 EDKEGDWMLVGDVPWGMFIGSVRRLRIMKTS 236

[Close]
BLAST of CSPI01G16780 vs. TAIR10
Match: AT5G25890.1 (AT5G25890.1 indole-3-acetic acid inducible 28)

HSP 1 Score: 68.6 bits (166), Expect = 5.6e-12
Identity = 38/128 (29.69%), Postives = 69/128 (53.91%), Query Frame = 1 

Query: 94  LVGWPPLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIAR 153
           +VGWPP++  R++L         A ++    K +       D     YVK+ MEGV I R
Sbjct: 49  VVGWPPVRSSRRNL--------TAQLKEEMKKKES------DEEKELYVKINMEGVPIGR 108

Query: 154 KVDLREHHSFDALRATLMKMFDETNS----EGYKLTFQNTKGEWLLAENVTWRNFIGTVQ 213
           KV+L  ++++  L   + ++F + +S      Y L +++T+G+ +L  +V W  F+ TV+
Sbjct: 109 KVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVK 162

Query: 214 RINLEKKS 218
           R+++ K S
Sbjct: 169 RLHVLKTS 162

[Close]
BLAST of CSPI01G16780 vs. TAIR10
Match: AT2G33310.2 (AT2G33310.2 auxin-induced protein 13)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 54/186 (29.03%), Postives = 82/186 (44.09%), Query Frame = 1 

Query: 58  LLLWNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRA 117
           LL   D P+ G     +    A S+      +    +VGWPP+   R +  +     + A
Sbjct: 45  LLTAKDFPSVGSKRAADSASHAGSSPPRSSSQ----VVGWPPIGSHRMNSLVNNQATKSA 104

Query: 118 VIRRPA----VKNDGVFWRGLDLNNS---RYVKVKMEGVGIARKVDLREHHSFDALRATL 177
                A    VK+D        +N      ++KV M+GV I RKVDL  H S++ L  TL
Sbjct: 105 REEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTL 164

Query: 178 MKMFDETN-------------------SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRI 218
             MF  TN                   S  + LT+++ +G+W+L  +V WR FI +V+R+
Sbjct: 165 EDMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRL 224

[Close]
BLAST of CSPI01G16780 vs. NCBI nr
Match: gi|700210036|gb|KGN65132.1| (hypothetical protein Csa_1G231530 [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 4.8e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262

Query: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 219
           GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]
BLAST of CSPI01G16780 vs. NCBI nr
Match: gi|778660006|ref|XP_004150206.2| (PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus])

HSP 1 Score: 445.7 bits (1145), Expect = 4.8e-122
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1 

Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60

Query: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120
           WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR
Sbjct: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120

Query: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180
           RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE
Sbjct: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180

Query: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 219
           GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG
Sbjct: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 218

[Close]
BLAST of CSPI01G16780 vs. NCBI nr
Match: gi|659086500|ref|XP_008443966.1| (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-110
Identity = 206/220 (93.64%), Postives = 207/220 (94.09%), Query Frame = 1 

Query: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATF-RQTLPLL 60
           MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDS  TF R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNDGDDDDPNDPHSASSNDSDEEEEE-ENGLVGWPPLKKRRKSLFMKEGVGRRAV 120
           LWNDHPNDGD DD NDP SASSNDSDEEEEE ENGLVGWPPLKKRRKSLFMKEGVGRRAV
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETN 180
           IRRPAVKNDG FWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLM MFDETN
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 181 SEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 219
           SEGY+LTFQNT GEWLLAENVTWRNFIG VQRI LEKKSG
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

[Close]
BLAST of CSPI01G16780 vs. NCBI nr
Match: gi|743806028|ref|XP_011017813.1| (PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica])

HSP 1 Score: 155.6 bits (392), Expect = 9.9e-35
Identity = 103/241 (42.74%), Postives = 141/241 (58.51%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIKPFDLNTHNNNPISLVFDS--------------INHKKRS----- 62
           MELQLGL L     +K  DLN++ + P  L   S              +N KKRS     
Sbjct: 1   MELQLGLGLPSEKTMKGLDLNSYVSEPKGLQLGSGQLQLGQCSWFSTNVNDKKRSFIDAF 60

Query: 63  ----RHLDSPATFRQTLPLLLWNDHPNDGDDDDPN-DPHSASSNDSDEEEEEENGLVGWP 122
                + D P    QTLPLL+WN+ PND DD   + D HS++S  S++ + E +G+VGWP
Sbjct: 61  EESSGNEDGP----QTLPLLVWNNQPNDEDDFPKDLDNHSSNSCASNKSDGESDGIVGWP 120

Query: 123 PLKKRRKSLFMKEGVGRRAVIRRPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLR 182
           P+K +RK L  ++  G   + R  AV N G        +   Y+KV MEGVGIARK+D+ 
Sbjct: 121 PIKFKRKKL-SRQSSGALEINR--AVDN-GCEDCQARTSKYMYIKVNMEGVGIARKIDVS 180

Query: 183 EHHSFDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKK 218
            HHSF AL+ TL+ MF   + NS  Y+LT+Q+ +G+WLLAE+V WRNF+GTV R+ L ++
Sbjct: 181 LHHSFPALKQTLLDMFGICQENSSSYRLTYQDREGDWLLAEDVPWRNFLGTVHRLKLMRR 233

[Close]
BLAST of CSPI01G16780 vs. NCBI nr
Match: gi|595820899|ref|XP_007204725.1| (hypothetical protein PRUPE_ppa010871mg [Prunus persica])

HSP 1 Score: 153.7 bits (387), Expect = 3.8e-34
Identity = 106/237 (44.73%), Postives = 137/237 (57.81%), Query Frame = 1 

Query: 3   MELQLGLALIPTNPIKPFDLNT--HNNNPISLVFDSINHKKRSRHLD------------S 62
           MELQLGLAL P+NPIK FDLN   +    ++ V   I++  + R  D            S
Sbjct: 1   MELQLGLAL-PSNPIKGFDLNNFGYEAKEVAAVSKHIHYDNKKRSFDQAFDEHNNNTSRS 60

Query: 63  PATFRQTLPLLLWNDH-PNDGD-DDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKS 122
            A   +TLPL LWN++ PN  D DDDP+     +S  +   + + +GLVGWPP+K  RK 
Sbjct: 61  TAAVPRTLPLFLWNNNQPNHHDKDDDPDKHQDNNSRFTIVIKNDGDGLVGWPPIKSWRKE 120

Query: 123 LFM---KEGVGRRAVIRRPAVKNDGVFWRGL-DLNNSRYVKVKMEGVGIARKVDLREHHS 182
                   G G R V         G   RG  + ++S +VKVKMEGVGIARK+DL  HHS
Sbjct: 121 ACFHNHNHGHGHRTV-----GNGSGGGGRGSSNHHHSTFVKVKMEGVGIARKIDLSLHHS 180

Query: 183 FDALRATLMKMFD--ETNSEGYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKS 218
           F  L  TLM MFD  + +S  YKLT+Q+ +G+WLLA +V WR FI +VQR+ L KKS
Sbjct: 181 FRTLADTLMDMFDKCQMDSNNYKLTYQDREGDWLLARDVPWRTFIRSVQRLKLVKKS 231

The following BLAST results are available for this feature:
BLAST of CSPI01G16780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA29_ARATH9.3e-1731.35Auxin-responsive protein IAA29 OS=Arabidopsis thaliana GN=IAA29 PE=2 SV=2[more]
IAA12_ARATH4.1e-1230.00Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1[more]
IAA11_ARATH1.5e-1128.48Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=1 SV=1[more]
IAA10_ORYSJ1.5e-1128.38Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=... [more]
IAA10_ORYSI1.5e-1128.38Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2[more]
BLAST of CSPI01G16780 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWC5_CUCSA3.3e-122100.00Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G231530 PE=3 SV=1[more]
M5VWY4_PRUPE2.6e-3444.73Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010871mg PE=3 SV=1[more]
B9IMW1_POPTR2.9e-3341.32Auxin-responsive protein OS=Populus trichocarpa GN=POPTR_0018s12790g PE=3 SV=1[more]
W9SZ29_9ROSA1.0e-3041.35Auxin-responsive protein OS=Morus notabilis GN=L484_008968 PE=3 SV=1[more]
I3NNW8_GOSHI1.9e-2939.46Auxin-responsive protein OS=Gossypium hirsutum GN=Aux9 PE=2 SV=1[more]
BLAST of CSPI01G16780 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32280.15.3e-1831.35 indole-3-acetic acid inducible 29[more]
AT1G04550.22.3e-1330.00 AUX/IAA transcriptional regulator family protein[more]
AT4G28640.28.7e-1328.48 indole-3-acetic acid inducible 11[more]
AT5G25890.15.6e-1229.69 indole-3-acetic acid inducible 28[more]
AT2G33310.22.8e-1129.03 auxin-induced protein 13[more]
BLAST of CSPI01G16780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210036|gb|KGN65132.1|4.8e-122100.00hypothetical protein Csa_1G231530 [Cucumis sativus][more]
gi|778660006|ref|XP_004150206.2|4.8e-122100.00PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus][more]
gi|659086500|ref|XP_008443966.1|2.5e-11093.64PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo][more]
gi|743806028|ref|XP_011017813.1|9.9e-3542.74PREDICTED: auxin-induced protein 22D-like isoform X1 [Populus euphratica][more]
gi|595820899|ref|XP_007204725.1|3.8e-3444.73hypothetical protein PRUPE_ppa010871mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009733 response to auxin
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0010033 response to organic substance
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G16780.1CSPI01G16780.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 139..216
score: 17
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 3..217
score: 5.1
NoneNo IPR availablePANTHERPTHR31734:SF38SUBFAMILY NOT NAMEDcoord: 3..217
score: 5.1
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 134..214
score: 3.6