CmoCh10G005700 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh10G005700
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAuxin-responsive protein
LocationCmo_Chr10 : 2588911 .. 2589898 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGGAGCTTCAGCTGAGTCTTGCTCTGTTCCCCACCAATCCCACTAAACCCTTCGACCTAAACACCCATCACCGCGCTCTCCCTTGCTTGGATTTCGACTCAATCAGCCGCAAAAAGCGCCCTCTCGATATCGACCCCTCTTCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGGCGATGACGACCCTAAAAACCCCAATTCCGCCTCCTCCAATCATCCGTACGCTACTCCTACCCATTTTTCTCTCTTTAATTTCGAATTCCGCGGCTGAATTTGTTAATTTGATTGATTTAACAGAGACAATCCGGAGGAACAGGAAATTGAGCTTGTCGGATGGCCGCCGCTTAAAAAGAGGAGGAAGACACTTTTCGTACAGAAGCGCATCGGAAGGGCCGTAGCGATCAGGCGTCCGGCGATGGAGAACGACGGCGGGGTTTACAGGGAATTGAATTCGAATAATTCCCGGTACGTGAAGGTGAAGATGGAGGGAGTGGGAATTGGTAGGAAGGTTGATATACGGCAACACCATTGTTTGGATGCGCTTAGAGCTACTTTGATGAACATGTTTGGTGAGCTGGTGTTGTTATCCCAATTAAGAATAGTTTATCCGGGTTACTGTGTACTGATTTTCGGGTTGTTTGGAAACAGATAAGCCGGATTCCGACGGCTACAACCTCACCTACCAGGATACCGACGGTGATTGGTTGCTTGCTGAGGACGTAACGTGGAGGTAAAGCCAAAGACTCACAAAAATAATAATATTTATATATTAGTTTAAAAAAATCTGAGTGGGTTTTGATTATGACAGAGATTTCATCCGAACCGTCCAACGGATCAAACTGGAAAAGAACGGCGGCTGATTAGGGGTTACCGACACCGGCGGTCAGAGAACCAGATGCTGTCTAATTAAATAGATTTTTTTTTTTAGCACTTTAATTTTTAACGACCGTATGAATGGG

mRNA sequence

ATGGCTATGGAGCTTCAGCTGAGTCTTGCTCTGTTCCCCACCAATCCCACTAAACCCTTCGACCTAAACACCCATCACCGCGCTCTCCCTTGCTTGGATTTCGACTCAATCAGCCGCAAAAAGCGCCCTCTCGATATCGACCCCTCTTCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGGCGATGACGACCCTAAAAACCCCAATTCCGCCTCCTCCAATCATCCAGACAATCCGGAGGAACAGGAAATTGAGCTTGTCGGATGGCCGCCGCTTAAAAAGAGGAGGAAGACACTTTTCGTACAGAAGCGCATCGGAAGGGCCGTAGCGATCAGGCGTCCGGCGATGGAGAACGACGGCGGGGTTTACAGGGAATTGAATTCGAATAATTCCCGGTACGTGAAGGTGAAGATGGAGGGAGTGGGAATTGGTAGGAAGGTTGATATACGGCAACACCATTGTTTGGATGCGCTTAGAGCTACTTTGATGAACATGTTTGATAAGCCGGATTCCGACGGCTACAACCTCACCTACCAGGATACCGACGGTGATTGGTTGCTTGCTGAGGACGTAACGTGGAGAGATTTCATCCGAACCGTCCAACGGATCAAACTGGAAAAGAACGGCGGCTGATTAGGGGTTACCGACACCGGCGGTCAGAGAACCAGATGCTGTCTAATTAAATAGATTTTTTTTTTTAGCACTTTAATTTTTAACGACCGTATGAATGGG

Coding sequence (CDS)

ATGGCTATGGAGCTTCAGCTGAGTCTTGCTCTGTTCCCCACCAATCCCACTAAACCCTTCGACCTAAACACCCATCACCGCGCTCTCCCTTGCTTGGATTTCGACTCAATCAGCCGCAAAAAGCGCCCTCTCGATATCGACCCCTCTTCGGCATTTCGTCGAACACTTCCTCTGCTTCTCTGGAATGACCATCCCAATAATGGCGATGACGACCCTAAAAACCCCAATTCCGCCTCCTCCAATCATCCAGACAATCCGGAGGAACAGGAAATTGAGCTTGTCGGATGGCCGCCGCTTAAAAAGAGGAGGAAGACACTTTTCGTACAGAAGCGCATCGGAAGGGCCGTAGCGATCAGGCGTCCGGCGATGGAGAACGACGGCGGGGTTTACAGGGAATTGAATTCGAATAATTCCCGGTACGTGAAGGTGAAGATGGAGGGAGTGGGAATTGGTAGGAAGGTTGATATACGGCAACACCATTGTTTGGATGCGCTTAGAGCTACTTTGATGAACATGTTTGATAAGCCGGATTCCGACGGCTACAACCTCACCTACCAGGATACCGACGGTGATTGGTTGCTTGCTGAGGACGTAACGTGGAGAGATTTCATCCGAACCGTCCAACGGATCAAACTGGAAAAGAACGGCGGCTGA
Homology
[Close]
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match: IAA29_ARATH (Auxin-responsive protein IAA29 OS=Arabidopsis thaliana GN=IAA29 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18
Identity = 76/242 (31.40%), Postives = 109/242 (45.04%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTK---PFDLNTH---HRALPCLDFDSISRKKR-PLDIDPSSAFRRT 62
           MEL L L+L P   +K    FDLN H     A  CL  + +  +    L     + +   
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 63  LPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKK-------------R 122
             L   N  PN  D+DP    S+      + EE+  E+VGWPP+K              R
Sbjct: 61  QRLFALNGQPNEEDEDPLESESSIVY---DDEEENSEVVGWPPVKTCMIKYGSYHHRHIR 120

Query: 123 RKTLFVQKRIGRAVAIRRPAMEND------GGVYRELNSNNSRYVKVKMEGVGIGRKVDI 182
                     GR +      + N             ++S +S YVKVKM+GV I RKVDI
Sbjct: 121 NHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDI 180

Query: 183 RQHHCLDALRATLMNMF------DKPDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRI 213
           +  +  ++L  +L+ MF      D+ D++ Y  T+Q  +GDWLL  DVTW+ F  +V RI
Sbjct: 181 KLFNSYESLTNSLITMFTEYEDCDREDTN-YTFTFQGKEGDWLLRGDVTWKIFAESVHRI 238

[Close]
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match: IAA10_ORYSI (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 50/162 (30.86%), Postives = 78/162 (48.15%), Query Frame = 1 

Query: 74  NPNSASSNHPDNPEEQEIELVGWPPLKK-RRKTLFVQKRIGRAVAIRRPAMENDGGVYRE 133
           +P + +S HP +       +VGWPP+++ R  +LF Q +   +    +    N+  V ++
Sbjct: 97  SPGTVASGHPHS----SFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKD 156

Query: 134 LNSNNSR-----YVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKP----------- 193
                 +     +VKV M+G  IGRKVD+  H     L   L  MF KP           
Sbjct: 157 KEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTN 216

Query: 194 ------DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
                 +S  Y LTY+D DGDW+L  DV W  F+ +V+R+++
Sbjct: 217 SLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRI 254

[Close]
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match: IAA10_ORYSJ (Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 1.7e-15
Identity = 50/162 (30.86%), Postives = 78/162 (48.15%), Query Frame = 1 

Query: 74  NPNSASSNHPDNPEEQEIELVGWPPLKK-RRKTLFVQKRIGRAVAIRRPAMENDGGVYRE 133
           +P + +S HP +       +VGWPP+++ R  +LF Q +   +    +    N+  V ++
Sbjct: 97  SPGTVASGHPHS----SFGVVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKD 156

Query: 134 LNSNNSR-----YVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKP----------- 193
                 +     +VKV M+G  IGRKVD+  H     L   L  MF KP           
Sbjct: 157 KEEGEKKGRVAGWVKVNMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTN 216

Query: 194 ------DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
                 +S  Y LTY+D DGDW+L  DV W  F+ +V+R+++
Sbjct: 217 SLKLLDNSAEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRI 254

[Close]
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 1 

Query: 92  ELVGWPPLKKRRKTLFVQKRIGRAVAIRRPAMENDGGVYRELNSN----NSRYVKVKMEG 151
           ++VGWPP++  R    V +   +A A   P +E    V +  + +    NS +VKV M+G
Sbjct: 88  QVVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDG 147

Query: 152 VGIGRKVDIRQHHCLDALRATLMNMFDKP-------DSDGYNLTYQ-------------- 211
           + IGRK+D+  H C ++L  TL  MF KP       ++DG+  T                
Sbjct: 148 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 207

Query: 212 -DTDGDWLLAEDVTWRDFIRTVQRIKLEK 215
            D +GDW+L  DV W  FI +V+R+++ K
Sbjct: 208 EDKEGDWMLVGDVPWGMFIGSVRRLRIMK 234

[Close]
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match: IAA12_ARATH (Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14
Identity = 58/180 (32.22%), Postives = 87/180 (48.33%), Query Frame = 1 

Query: 58  LLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVA 117
           +L   D P+ G       ++ SS+H      +  ++VGWPP+   R    V  +  +A  
Sbjct: 39  ILTAKDFPSVGS----KRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAAR 98

Query: 118 IR-----RPAMENDG--GVYRELNSN--NSRYVKVKMEGVGIGRKVDIRQHHCLDALRAT 177
                  +  ++ND    V  ++N       +VKV M+GVGIGRKVD+R H   + L  T
Sbjct: 99  AEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQT 158

Query: 178 LMNMFD-----------KP-----DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
           L  MF            KP      S  + LTY+D +GDW+L  DV WR FI +V+R+++
Sbjct: 159 LEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]
BLAST of CmoCh10G005700 vs. TrEMBL
Match: A0A0A0LWC5_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G231530 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.9e-78
Identity = 147/218 (67.43%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNNGDDD-PKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120
           WNDHPN+GDDD P +P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+++ +GR   IR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSD 180
           RPA++NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MFD+ +S+
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262

Query: 181 GYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           GY LT+Q+T G+WLLAE+VTWR+FI TVQRI LEK  G
Sbjct: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]
BLAST of CmoCh10G005700 vs. TrEMBL
Match: W9SZ29_9ROSA (Auxin-responsive protein OS=Morus notabilis GN=L484_008968 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33
Identity = 94/230 (40.87%), Postives = 119/230 (51.74%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPT----KPFDLNTHHRALPCLDFDSISRKKRPL-------------- 62
           MELQL LAL P+N +    + FDLN     +       I   K+P               
Sbjct: 1   MELQLGLALLPSNSSLDHVQGFDLNKEGLIIGSNHHHEIRSNKKPRFCQAFLENNDDDDD 60

Query: 63  DIDPSSAFRRTLPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRK 122
           D     +  +TLPLL WN+ PN GD+DP       S    +  E E  +VGWPP+K RRK
Sbjct: 61  DHHHQDSLPKTLPLLCWNNQPNEGDNDPYRDLHKYSTFSLSKNEGEDGVVGWPPIKSRRK 120

Query: 123 TLFVQKRIGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDA 182
            L     +G    I R     + G    +  +   YVKVKMEG+ I RK+D+  H C   
Sbjct: 121 RLCCN--VGDRSEINRTV---ENGCSCGMRVSKFMYVKVKMEGMAIARKIDLSLHSCFGT 180

Query: 183 LRATLMNMFDK--PDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
           L  TLM+MF K   DS  + LTYQD +GDWLLA+DV WR FIR+VQR+KL
Sbjct: 181 LTDTLMDMFGKCQEDSGNHKLTYQDREGDWLLAQDVPWRTFIRSVQRLKL 225

[Close]
BLAST of CmoCh10G005700 vs. TrEMBL
Match: M5VWY4_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010871mg PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-32
Identity = 100/233 (42.92%), Postives = 123/233 (52.79%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISR------KKRPLD----------I 62
           MELQL LAL P+NP K FDLN         +  ++S+      KKR  D           
Sbjct: 1   MELQLGLAL-PSNPIKGFDLNNF--GYEAKEVAAVSKHIHYDNKKRSFDQAFDEHNNNTS 60

Query: 63  DPSSAFRRTLPLLLWNDHPNNG---DDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRR 122
             ++A  RTLPL LWN++  N    DDDP      +S      +     LVGWPP+K  R
Sbjct: 61  RSTAAVPRTLPLFLWNNNQPNHHDKDDDPDKHQDNNSRFTIVIKNDGDGLVGWPPIKSWR 120

Query: 123 KTLFVQKRIGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLD 182
           K              R     + GG     N ++S +VKVKMEGVGI RK+D+  HH   
Sbjct: 121 KEACFHNH-NHGHGHRTVGNGSGGGGRGSSNHHHSTFVKVKMEGVGIARKIDLSLHHSFR 180

Query: 183 ALRATLMNMFDK--PDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEK 215
            L  TLM+MFDK   DS+ Y LTYQD +GDWLLA DV WR FIR+VQR+KL K
Sbjct: 181 TLADTLMDMFDKCQMDSNNYKLTYQDREGDWLLARDVPWRTFIRSVQRLKLVK 229

[Close]
BLAST of CmoCh10G005700 vs. TrEMBL
Match: A0A0B0NMH8_GOSAR (Auxin-responsive protein OS=Gossypium arboreum GN=F383_20304 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 92/237 (38.82%), Postives = 128/237 (54.01%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTKPFDLNTH--------------HRALPCLDFDSISRKKRPLD--I 62
           MELQL LAL   N  K FDLN H              ++A  C       + KR  +   
Sbjct: 1   MELQLGLALPTPNMLKGFDLNNHGLDQLKEMGGLEAWNKAAGCFADKDCVKSKRSFEQAF 60

Query: 63  DPSSAFRRTLPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTL 122
              +   RT PLLLW+  PN  +D      +  S   +N  E++ ++VGWPP+K  RK +
Sbjct: 61  GNFTEECRTKPLLLWSGQPNEEEDHKDQKKATFSTTDENDAEEDDQVVGWPPIKTWRKKI 120

Query: 123 FVQK---RIGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLD 182
           F Q+   R+GRA   R    EN+ G         S YVKVKMEGV I RK+DI+ +H   
Sbjct: 121 FQQQQQPRVGRAENNR--VAENENG--------RSIYVKVKMEGVAITRKIDIKVYHSYQ 180

Query: 183 ALRATLMNMFDKP---DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           +L  +L+ MF K    + D Y LTYQD +GDWL+A D+ W++F+R+VQR+++ +N G
Sbjct: 181 SLTNSLITMFTKDKECNEDDYILTYQDKEGDWLIAGDIPWQNFVRSVQRMEIVRNWG 227

[Close]
BLAST of CmoCh10G005700 vs. TrEMBL
Match: A0A0D2UH54_GOSRA (Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G058600 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.4e-32
Identity = 93/237 (39.24%), Postives = 128/237 (54.01%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTKPFDLNTH--------------HRALPCLDFDSISRKKRPLD--I 62
           MELQL LAL   N  K FDLN H              ++A  C       + KR  +   
Sbjct: 1   MELQLGLALPTPNMVKGFDLNNHGLDQLKEMGGLEAWNKAAGCFADKDCVKSKRSFEQAF 60

Query: 63  DPSSAFRRTLPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTL 122
              +   RT PLLLW+  PN  +D      +  S   +N  E++ ++VGWPP+K  R  +
Sbjct: 61  GNFTEECRTKPLLLWSGQPNEEEDHKDQKKATFSTTDENDAEEDDQVVGWPPIKTWRNKI 120

Query: 123 FVQK---RIGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLD 182
           F Q+   R+GRA   RR A EN+ G         S YVKVKMEGV I RK+DI+ +    
Sbjct: 121 FQQQQQPRVGRAENNRRVA-ENENG--------RSIYVKVKMEGVAITRKIDIKLYQSYQ 180

Query: 183 ALRATLMNMFDKP---DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           +L  +L+ MF K    D D Y LTYQD +GDWL+A D+ W++F+R+VQR+++ +N G
Sbjct: 181 SLTNSLITMFAKDKKCDEDDYILTYQDKEGDWLIAGDIPWQNFVRSVQRMEIVRNWG 228

[Close]
BLAST of CmoCh10G005700 vs. TAIR10
Match: AT4G32280.1 (AT4G32280.1 indole-3-acetic acid inducible 29)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19
Identity = 76/242 (31.40%), Postives = 109/242 (45.04%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTK---PFDLNTH---HRALPCLDFDSISRKKR-PLDIDPSSAFRRT 62
           MEL L L+L P   +K    FDLN H     A  CL  + +  +    L     + +   
Sbjct: 1   MELDLGLSLSPHKSSKLGFNFDLNKHCAIEGAASCLGTEKLRFEATFGLGNVEENCYMPK 60

Query: 63  LPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKK-------------R 122
             L   N  PN  D+DP    S+      + EE+  E+VGWPP+K              R
Sbjct: 61  QRLFALNGQPNEEDEDPLESESSIVY---DDEEENSEVVGWPPVKTCMIKYGSYHHRHIR 120

Query: 123 RKTLFVQKRIGRAVAIRRPAMEND------GGVYRELNSNNSRYVKVKMEGVGIGRKVDI 182
                     GR +      + N             ++S +S YVKVKM+GV I RKVDI
Sbjct: 121 NHHHCPYHHRGRRITAMNNNISNPTTATVGSSSSSSISSRSSMYVKVKMDGVAIARKVDI 180

Query: 183 RQHHCLDALRATLMNMF------DKPDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRI 213
           +  +  ++L  +L+ MF      D+ D++ Y  T+Q  +GDWLL  DVTW+ F  +V RI
Sbjct: 181 KLFNSYESLTNSLITMFTEYEDCDREDTN-YTFTFQGKEGDWLLRGDVTWKIFAESVHRI 238

[Close]
BLAST of CmoCh10G005700 vs. TAIR10
Match: AT4G28640.2 (AT4G28640.2 indole-3-acetic acid inducible 11)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 49/149 (32.89%), Postives = 76/149 (51.01%), Query Frame = 1 

Query: 92  ELVGWPPLKKRRKTLFVQKRIGRAVAIRRPAMENDGGVYRELNSN----NSRYVKVKMEG 151
           ++VGWPP++  R    V +   +A A   P +E    V +  + +    NS +VKV M+G
Sbjct: 88  QVVGWPPIRTYRMNSMVNQ--AKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDG 147

Query: 152 VGIGRKVDIRQHHCLDALRATLMNMFDKP-------DSDGYNLTYQ-------------- 211
           + IGRK+D+  H C ++L  TL  MF KP       ++DG+  T                
Sbjct: 148 IPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDGSSGLVLTY 207

Query: 212 -DTDGDWLLAEDVTWRDFIRTVQRIKLEK 215
            D +GDW+L  DV W  FI +V+R+++ K
Sbjct: 208 EDKEGDWMLVGDVPWGMFIGSVRRLRIMK 234

[Close]
BLAST of CmoCh10G005700 vs. TAIR10
Match: AT1G04550.2 (AT1G04550.2 AUX/IAA transcriptional regulator family protein)

HSP 1 Score: 80.1 bits (196), Expect = 1.9e-15
Identity = 58/180 (32.22%), Postives = 87/180 (48.33%), Query Frame = 1 

Query: 58  LLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVA 117
           +L   D P+ G       ++ SS+H      +  ++VGWPP+   R    V  +  +A  
Sbjct: 39  ILTAKDFPSVGS----KRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAAR 98

Query: 118 IR-----RPAMENDG--GVYRELNSN--NSRYVKVKMEGVGIGRKVDIRQHHCLDALRAT 177
                  +  ++ND    V  ++N       +VKV M+GVGIGRKVD+R H   + L  T
Sbjct: 99  AEEGDGEKKVVKNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQT 158

Query: 178 LMNMFD-----------KP-----DSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
           L  MF            KP      S  + LTY+D +GDW+L  DV WR FI +V+R+++
Sbjct: 159 LEEMFFGMTGTTCREKVKPLRLLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214

[Close]
BLAST of CmoCh10G005700 vs. TAIR10
Match: AT2G33310.2 (AT2G33310.2 auxin-induced protein 13)

HSP 1 Score: 78.6 bits (192), Expect = 5.4e-15
Identity = 53/183 (28.96%), Postives = 85/183 (46.45%), Query Frame = 1 

Query: 58  LLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVA 117
           LL   D P+ G    K    ++S+   +P     ++VGWPP+   R    V  +  ++  
Sbjct: 45  LLTAKDFPSVGS---KRAADSASHAGSSPPRSSSQVVGWPPIGSHRMNSLVNNQATKSAR 104

Query: 118 IRRPAM------ENDGGVYRELNSN-NSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLM 177
               A       +    V +++N      ++KV M+GV IGRKVD+  H   + L  TL 
Sbjct: 105 EEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 164

Query: 178 NMFDKPD-------------------SDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIK 215
           +MF + +                   S  + LTY+D +GDW+L  DV WR FI +V+R++
Sbjct: 165 DMFFRTNPGTVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLR 224

[Close]
BLAST of CmoCh10G005700 vs. TAIR10
Match: AT5G25890.1 (AT5G25890.1 indole-3-acetic acid inducible 28)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-13
Identity = 46/153 (30.07%), Postives = 76/153 (49.67%), Query Frame = 1 

Query: 66  NNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIRRPAMEN 125
           NN +   +  ++  ++   N   +   +VGWPP++  R+ L  Q        ++    + 
Sbjct: 22  NNINGSKQKSSTKETSFLSNNRVEVAPVVGWPPVRSSRRNLTAQ--------LKEEMKKK 81

Query: 126 DGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDS----DGY 185
           +    +EL      YVK+ MEGV IGRKV++  ++    L   +  +F K DS      Y
Sbjct: 82  ESDEEKEL------YVKINMEGVPIGRKVNLSAYNNYQQLSHAVDQLFSKKDSWDLNRQY 141

Query: 186 NLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEK 215
            L Y+DT+GD +L  DV W  F+ TV+R+ + K
Sbjct: 142 TLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLK 160

[Close]
BLAST of CmoCh10G005700 vs. NCBI nr
Match: gi|700210036|gb|KGN65132.1| (hypothetical protein Csa_1G231530 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 4.2e-78
Identity = 147/218 (67.43%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 83  MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 142

Query: 61  WNDHPNNGDDD-PKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120
           WNDHPN+GDDD P +P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+++ +GR   IR
Sbjct: 143 WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 202

Query: 121 RPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSD 180
           RPA++NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MFD+ +S+
Sbjct: 203 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 262

Query: 181 GYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           GY LT+Q+T G+WLLAE+VTWR+FI TVQRI LEK  G
Sbjct: 263 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 300

[Close]
BLAST of CmoCh10G005700 vs. NCBI nr
Match: gi|778660006|ref|XP_004150206.2| (PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 4.2e-78
Identity = 147/218 (67.43%), Postives = 175/218 (80.28%), Query Frame = 1 

Query: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAFRRTLPLLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D  + FR+TLPLLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSPATFRQTLPLLL 60

Query: 61  WNDHPNNGDDD-PKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKRIGRAVAIR 120
           WNDHPN+GDDD P +P+SASSN  D  EE+E  LVGWPPLKKRRK+LF+++ +GR   IR
Sbjct: 61  WNDHPNDGDDDDPNDPHSASSNDSDEEEEEENGLVGWPPLKKRRKSLFMKEGVGRRAVIR 120

Query: 121 RPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPDSD 180
           RPA++NDG  +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLM MFD+ +S+
Sbjct: 121 RPAVKNDGVFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMKMFDETNSE 180

Query: 181 GYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           GY LT+Q+T G+WLLAE+VTWR+FI TVQRI LEK  G
Sbjct: 181 GYKLTFQNTKGEWLLAENVTWRNFIGTVQRINLEKKSG 218

[Close]
BLAST of CmoCh10G005700 vs. NCBI nr
Match: gi|659086500|ref|XP_008443966.1| (PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 6.7e-76
Identity = 149/220 (67.73%), Postives = 175/220 (79.55%), Query Frame = 1 

Query: 1   MAMELQLSLALFPTNPTKPFDLNTHHRALPCLDFDSISRKKRPLDIDPSSAF-RRTLPLL 60
           MAMELQL LAL PTNP KPFDLNTH+     L FDSI+ KKR   +D S  F R TLPLL
Sbjct: 1   MAMELQLGLALIPTNPIKPFDLNTHNNNPISLVFDSINHKKRSRHLDSSPTFPRTTLPLL 60

Query: 61  LWNDHPNNGD-DDPKNPNSASSNHPDNPEEQ-EIELVGWPPLKKRRKTLFVQKRIGRAVA 120
           LWNDHPN+GD DD  +P SASSN  D  EE+ E  LVGWPPLKKRRK+LF+++ +GR   
Sbjct: 61  LWNDHPNDGDGDDSNDPLSASSNDSDEEEEERENGLVGWPPLKKRRKSLFMKEGVGRRAV 120

Query: 121 IRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATLMNMFDKPD 180
           IRRPA++NDGG +R L+ NNSRYVKVKMEGVGI RKVD+R+HH  DALRATLMNMFD+ +
Sbjct: 121 IRRPAVKNDGGFWRGLDLNNSRYVKVKMEGVGIARKVDLREHHSFDALRATLMNMFDETN 180

Query: 181 SDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           S+GY LT+Q+T+G+WLLAE+VTWR+FI  VQRIKLEK  G
Sbjct: 181 SEGYRLTFQNTNGEWLLAENVTWRNFIGDVQRIKLEKKSG 220

[Close]
BLAST of CmoCh10G005700 vs. NCBI nr
Match: gi|225445577|ref|XP_002285354.1| (PREDICTED: auxin-responsive protein IAA9-like isoform X1 [Vitis vinifera])

HSP 1 Score: 154.8 bits (390), Expect = 1.7e-34
Identity = 100/230 (43.48%), Postives = 127/230 (55.22%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPTKPFDLNTH-------HRALPCLDFDSI----SRKKRPLDIDPSSA 62
           MELQL LAL PT+P   FDLN H         +  C   D +    S KKR   I+    
Sbjct: 1   MELQLGLAL-PTSPVNDFDLNCHVSDPTEAASSDLCGRGDDMISGRSNKKRGF-IEAFEL 60

Query: 63  FRRTLPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRKTLFVQKR 122
             +TLPLLLWNDHPN+ DDD       +S+      +    +VGWPP+K RRK +    R
Sbjct: 61  PPQTLPLLLWNDHPNDDDDDDDRKGVENSSFIAKKNDDGYCIVGWPPIKFRRKKICSHNR 120

Query: 123 --IGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDALRATL 182
               R V     A    GG      + NS+YVKVKM GVGI RK+D+ +HH    L  TL
Sbjct: 121 DDNDRTVLHNGSARAGVGGGV----NPNSKYVKVKMVGVGIARKIDLSRHHSYQTLTNTL 180

Query: 183 MNMFDK--PDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKLEKNGG 218
           +NMF K   D+  + L YQD +GDWLLA DV WR FI++V+R+K+ + GG
Sbjct: 181 INMFGKCQQDAQSFKLAYQDREGDWLLAGDVPWRTFIQSVERLKILRIGG 224

[Close]
BLAST of CmoCh10G005700 vs. NCBI nr
Match: gi|703160307|ref|XP_010112480.1| (Auxin-responsive protein IAA29 [Morus notabilis])

HSP 1 Score: 149.8 bits (377), Expect = 5.4e-33
Identity = 94/230 (40.87%), Postives = 119/230 (51.74%), Query Frame = 1 

Query: 3   MELQLSLALFPTNPT----KPFDLNTHHRALPCLDFDSISRKKRPL-------------- 62
           MELQL LAL P+N +    + FDLN     +       I   K+P               
Sbjct: 1   MELQLGLALLPSNSSLDHVQGFDLNKEGLIIGSNHHHEIRSNKKPRFCQAFLENNDDDDD 60

Query: 63  DIDPSSAFRRTLPLLLWNDHPNNGDDDPKNPNSASSNHPDNPEEQEIELVGWPPLKKRRK 122
           D     +  +TLPLL WN+ PN GD+DP       S    +  E E  +VGWPP+K RRK
Sbjct: 61  DHHHQDSLPKTLPLLCWNNQPNEGDNDPYRDLHKYSTFSLSKNEGEDGVVGWPPIKSRRK 120

Query: 123 TLFVQKRIGRAVAIRRPAMENDGGVYRELNSNNSRYVKVKMEGVGIGRKVDIRQHHCLDA 182
            L     +G    I R     + G    +  +   YVKVKMEG+ I RK+D+  H C   
Sbjct: 121 RLCCN--VGDRSEINRTV---ENGCSCGMRVSKFMYVKVKMEGMAIARKIDLSLHSCFGT 180

Query: 183 LRATLMNMFDK--PDSDGYNLTYQDTDGDWLLAEDVTWRDFIRTVQRIKL 213
           L  TLM+MF K   DS  + LTYQD +GDWLLA+DV WR FIR+VQR+KL
Sbjct: 181 LTDTLMDMFGKCQEDSGNHKLTYQDREGDWLLAQDVPWRTFIRSVQRLKL 225

The following BLAST results are available for this feature:
BLAST of CmoCh10G005700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA29_ARATH2.2e-1831.40Auxin-responsive protein IAA29 OS=Arabidopsis thaliana GN=IAA29 PE=2 SV=2[more]
IAA10_ORYSI1.7e-1530.86Auxin-responsive protein IAA10 OS=Oryza sativa subsp. indica GN=IAA10 PE=2 SV=2[more]
IAA10_ORYSJ1.7e-1530.86Auxin-responsive protein IAA10 OS=Oryza sativa subsp. japonica GN=IAA10 PE=2 SV=... [more]
IAA11_ARATH1.9e-1432.89Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=1 SV=1[more]
IAA12_ARATH3.3e-1432.22Auxin-responsive protein IAA12 OS=Arabidopsis thaliana GN=IAA12 PE=1 SV=1[more]
BLAST of CmoCh10G005700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWC5_CUCSA2.9e-7867.43Auxin-responsive protein OS=Cucumis sativus GN=Csa_1G231530 PE=3 SV=1[more]
W9SZ29_9ROSA3.8e-3340.87Auxin-responsive protein OS=Morus notabilis GN=L484_008968 PE=3 SV=1[more]
M5VWY4_PRUPE1.4e-3242.92Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010871mg PE=3 SV=1[more]
A0A0B0NMH8_GOSAR2.4e-3238.82Auxin-responsive protein OS=Gossypium arboreum GN=F383_20304 PE=3 SV=1[more]
A0A0D2UH54_GOSRA2.4e-3239.24Auxin-responsive protein OS=Gossypium raimondii GN=B456_009G058600 PE=3 SV=1[more]
BLAST of CmoCh10G005700 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G32280.11.2e-1931.40 indole-3-acetic acid inducible 29[more]
AT4G28640.21.1e-1532.89 indole-3-acetic acid inducible 11[more]
AT1G04550.21.9e-1532.22 AUX/IAA transcriptional regulator family protein[more]
AT2G33310.25.4e-1528.96 auxin-induced protein 13[more]
AT5G25890.13.9e-1330.07 indole-3-acetic acid inducible 28[more]
BLAST of CmoCh10G005700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210036|gb|KGN65132.1|4.2e-7867.43hypothetical protein Csa_1G231530 [Cucumis sativus][more]
gi|778660006|ref|XP_004150206.2|4.2e-7867.43PREDICTED: auxin-responsive protein IAA29-like [Cucumis sativus][more]
gi|659086500|ref|XP_008443966.1|6.7e-7667.73PREDICTED: auxin-responsive protein IAA29-like [Cucumis melo][more]
gi|225445577|ref|XP_002285354.1|1.7e-3443.48PREDICTED: auxin-responsive protein IAA9-like isoform X1 [Vitis vinifera][more]
gi|703160307|ref|XP_010112480.1|5.4e-3340.87Auxin-responsive protein IAA29 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009733 response to auxin
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0009734 auxin-activated signaling pathway
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh10G005700.1CmoCh10G005700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 138..217
score: 2
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 3..212
score: 1.7
NoneNo IPR availableGENE3DG3DSA:3.10.20.240coord: 141..207
score: 1.
NoneNo IPR availablePANTHERPTHR31734:SF38SUBFAMILY NOT NAMEDcoord: 3..212
score: 1.7
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 132..212
score: 7.85

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh10G005700Cucsa.036190Cucumber (Gy14) v1cgycmoB0020
CmoCh10G005700CmaCh10G005340Cucurbita maxima (Rimu)cmacmoB067
CmoCh10G005700CmaCh11G005320Cucurbita maxima (Rimu)cmacmoB099
CmoCh10G005700Cla012214Watermelon (97103) v1cmowmB063
CmoCh10G005700Cla020976Watermelon (97103) v1cmowmB049
CmoCh10G005700Csa1G231530Cucumber (Chinese Long) v2cmocuB041
CmoCh10G005700MELO3C010317Melon (DHL92) v3.5.1cmomeB049
CmoCh10G005700ClCG05G016850Watermelon (Charleston Gray)cmowcgB059
CmoCh10G005700ClCG06G011420Watermelon (Charleston Gray)cmowcgB064
CmoCh10G005700CSPI01G16780Wild cucumber (PI 183967)cmocpiB044
CmoCh10G005700Lsi04G021240Bottle gourd (USVL1VR-Ls)cmolsiB045
CmoCh10G005700Lsi06G009920Bottle gourd (USVL1VR-Ls)cmolsiB060
CmoCh10G005700Lsi08G012110Bottle gourd (USVL1VR-Ls)cmolsiB070
CmoCh10G005700Cp4.1LG18g05170Cucurbita pepo (Zucchini)cmocpeB055
CmoCh10G005700Cp4.1LG04g09290Cucurbita pepo (Zucchini)cmocpeB068
CmoCh10G005700Cp4.1LG11g03150Cucurbita pepo (Zucchini)cmocpeB050
CmoCh10G005700MELO3C011268.2Melon (DHL92) v3.6.1cmomedB070
CmoCh10G005700MELO3C010317.2Melon (DHL92) v3.6.1cmomedB052
CmoCh10G005700CsaV3_1G026650Cucumber (Chinese Long) v3cmocucB0054
CmoCh10G005700CsaV3_2G032150Cucumber (Chinese Long) v3cmocucB0071
CmoCh10G005700Cla97C05G097940Watermelon (97103) v2cmowmbB061
CmoCh10G005700Cla97C08G156790Watermelon (97103) v2cmowmbB075
CmoCh10G005700Cla97C06G120580Watermelon (97103) v2cmowmbB070
CmoCh10G005700Bhi04G000778Wax gourdcmowgoB0054
CmoCh10G005700Bhi02G000800Wax gourdcmowgoB0070
CmoCh10G005700CsGy2G023370Cucumber (Gy14) v2cgybcmoB147
CmoCh10G005700CsGy1G016970Cucumber (Gy14) v2cgybcmoB014
CmoCh10G005700Carg02880Silver-seed gourdcarcmoB0866
CmoCh10G005700Carg09932Silver-seed gourdcarcmoB0172
CmoCh10G005700Carg12118Silver-seed gourdcarcmoB0047
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh10G005700CmoCh09G004620Cucurbita moschata (Rifu)cmocmoB000
CmoCh10G005700CmoCh11G005280Cucurbita moschata (Rifu)cmocmoB038
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh10G005700Cucumber (Chinese Long) v3cmocucB0070
CmoCh10G005700Watermelon (97103) v2cmowmbB044
CmoCh10G005700Wax gourdcmowgoB0043
CmoCh10G005700Cucurbita moschata (Rifu)cmocmoB050
CmoCh10G005700Cucurbita moschata (Rifu)cmocmoB069
CmoCh10G005700Cucurbita moschata (Rifu)cmocmoB075
CmoCh10G005700Cucumber (Gy14) v1cgycmoB0355
CmoCh10G005700Cucurbita maxima (Rimu)cmacmoB169
CmoCh10G005700Cucurbita maxima (Rimu)cmacmoB757
CmoCh10G005700Wild cucumber (PI 183967)cmocpiB066
CmoCh10G005700Cucumber (Chinese Long) v2cmocuB065
CmoCh10G005700Melon (DHL92) v3.5.1cmomeB067
CmoCh10G005700Watermelon (Charleston Gray)cmowcgB039
CmoCh10G005700Watermelon (97103) v1cmowmB059
CmoCh10G005700Cucurbita pepo (Zucchini)cmocpeB048
CmoCh10G005700Cucurbita pepo (Zucchini)cmocpeB077
CmoCh10G005700Bottle gourd (USVL1VR-Ls)cmolsiB035
CmoCh10G005700Cucumber (Gy14) v2cgybcmoB146
CmoCh10G005700Melon (DHL92) v3.6.1cmomedB073
CmoCh10G005700Silver-seed gourdcarcmoB0353
CmoCh10G005700Silver-seed gourdcarcmoB0772