CsaV3_1G009620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G009620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRibonucleoside-diphosphate reductase subunit beta
Locationchr1 : 5963526 .. 5966271 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTTAATGGATACTTTTGGAATTAAAAAGTGGAGGAGGAGAAGTGTTTGTTTGTTTTAGTTGTAAAATTATGTGATGTTAACGAAAAAAATGGTTAATTAGATTTATGAAGAATGCGGCATAGGAAATCGCAATCAGAGCAGCTTCTTCCTTCTTAATCTTCAAAAAGTGGAAGTAAAATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGTCATACCACTACTTTACACTACTTATTACTTTCTTTTGCATTCTGCTTCTTCTTCGTGCTTAGAATTGAATGTTCATGATGTAGAGCTTGAATTGTTATGGCTTTTGTTTCAGAGGTAGTTTGTCAGGCAATGCTCTTTGTTCTTTAAGAGTTTTAGGGCATGTTTGGGAGTGATGAATCATTATCACACTAACCCAATTGTGATGATATAAAAACATTAAATTAATTAAATATGGTAGAATAATTTTAACAATTTCAAGATGACTGCTGAATATGAACTTACTATCCAAGTCCTTTTGTTGATGGATAAATAACTTCTAGATTCTGGTTATTGATTTGGTTTAGACTTATGAATTATTTGTAGTTCGATGAAACTGTTGTGCTTTCAGTGGCTAAACTGTTAAGGTACTGTAGTGTTTTTTCCTTTCATTGTCTTACCTCTAGCCATTCATCTGTGGTTGTTACATTTTTCTTTAATGAACCCTAAATGAAACTTATGATTTGTAATTTGATATGTTCCATGACAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGTATCTATTCATTTGTCATATGAACTGTTAGAGGATTCAGTTCACAGTGAAAGTTTTGACTGTTTAAGTGCCTAAAATTAGATTTACATTTAGAAAGTCAATCTAAACAGGTCTTGAGTCAACTAATTGAAACATTCTACTGATGATGATGTTCTGTGTTCTTAAGTTCTACAAAATCTCGTTGACTTATTTCGTTTGCCAGTATCTTATTACCTCATTTTATCTGGCATGTGTGAAGAAACATGGCATACAAACTAATCAATTTTACTCTTGTTTTGTTTTTTAATGAAGTTTTATTGTTTCTTGGGCAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTAAACTTTTTTTTTTTTTCTGCATACTATATTTTCCTTAAAAGACTTCTTATCATCTCACCTTTCTTATAAGTTTACTTAAAGTTCATATTCAAACTTGATTTCTAAATGCTGGAACTGAAGGTTAGGATACAATTAAAAATAGTCTTTGCCCTCACAAATAACACCACTCTTATGTGTACTCGAACTTTCCTTTTGTTATTGTAGGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATGTAAGTTCACAATGTGACTTTTCAGTTTCGTTTTTGGTTAAATCGCACCTTGCTGTCAAAGAAATAGGGTGGTTTGTTTATAAATTTTGTTGAATCTTTCAGTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAGAGAAACCTTGGGGACTGCCATCACTCTTGAGTTCGGAATATGGATCCAATTCCAAGTTTGTAGTCATTGCCAAGTTTTTTACCTTGTTCACTGCTGAATATTGTTGCCCCATTGCCTTGCTTTCTCACTCTAGAATAGAGTACTAGATCAGGCAAATCTATTAGATATTTAACTAACCTAATATGTTATATACCTCCATACCTTAGAAAATATTGATATCCCTTCGATCATGTATGGTGTGCCTCTAGTTCTATGCGTCATGTCGAATTTTAGATGATAACGTTGAGAATACTTTTTCTATGATATTTGATATTTCACTTCAATGTTCATTGAATTGATTAGGCTTACATTTTGTATAACGTTTTAGGAGAATGTTGAGGTAAAGTGTAAGCAAATGCATCGATAAAATATATCATTACTTCATAAAAGGATTGACGTTTATAAACAGTGTGAATGAATGTTTATTCTGAACAATTCATTCATATAGTATTGTTGTTCATGTATAAGAATTTCATCCTTAAATATCGTTGGTGGTGTTCAACTTAACTCGAGCTCTTTTCCAACAAACAAACCTACAATTTGAATAAGCCAAGTACTTGTGTAGATATGAATTTCGTATAAATGCTCTTCAATTATTAT

mRNA sequence

ATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAG

Coding sequence (CDS)

ATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAG

Protein sequence

MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVNN
Homology
[Close]
BLAST of CsaV3_1G009620 vs. NCBI nr
Match: XP_004152526.1 (PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hypothetical protein Csa_1G050460 [Cucumis sativus])

HSP 1 Score: 522.3 bits (1344), Expect = 9.3e-145
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGVNN 259
           ELEKLLASKFSKSQGVNN
Sbjct: 241 ELEKLLASKFSKSQGVNN 258

[Close]
BLAST of CsaV3_1G009620 vs. NCBI nr
Match: XP_016901626.1 (PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 4.3e-134
Identity = 247/263 (93.92%), Postives = 250/263 (95.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGE--EEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+TREG E  E EDPKPSDVNP+DHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEG---DQGDLPH 120
           AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDE        LPH
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEAXXXXXXXLPH 120

Query: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYL KRKEAFRK
Sbjct: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAFRK 240

Query: 241 YEILVELEKLLASKFSKSQGVNN 259
           YEILVELEKLLA+KFSKSQGVNN
Sbjct: 241 YEILVELEKLLAAKFSKSQGVNN 263

[Close]
BLAST of CsaV3_1G009620 vs. NCBI nr
Match: XP_022137036.1 (uncharacterized protein LOC111008597 isoform X1 [Momordica charantia])

HSP 1 Score: 430.6 bits (1106), Expect = 3.7e-117
Identity = 217/256 (84.77%), Postives = 228/256 (89.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP E+T     + E PKPSD+NP+D  D SQEWE MARAWLCSFPEA+AGSMEEVEAW
Sbjct: 1   MSNPAEET-----QGEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I  Q        LPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSNQGKEEI--QXXXXXXXXLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQ +EVVKSK+ISDWLTENP+IRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQ+PDKSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQMPDKSPLKVHKDVLMKPALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGV 257
           ELEKLLA  FSKSQGV
Sbjct: 241 ELEKLLAPNFSKSQGV 249

[Close]
BLAST of CsaV3_1G009620 vs. NCBI nr
Match: XP_022994449.1 (uncharacterized protein LOC111490167 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 8.5e-114
Identity = 216/267 (80.90%), Postives = 227/267 (85.02%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIH-------KQQDEGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I                   
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGXXXXXXXXXXXXXXXXX 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPD----KSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240
           KCHLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240

Query: 241 KEAFRKYEILVELEKLLASKFSKSQGV 257
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 263

[Close]
BLAST of CsaV3_1G009620 vs. NCBI nr
Match: XP_023542742.1 (uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 403.7 bits (1036), Expect = 4.8e-109
Identity = 210/267 (78.65%), Postives = 220/267 (82.40%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIH-------KQQDEGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I                   
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGXXXXXXXXXXXXXXXXX 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQL----PDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240
           KCHLKILKRKEKKKGSQL           VHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240

Query: 241 KEAFRKYEILVELEKLLASKFSKSQGV 257
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 263

[Close]
BLAST of CsaV3_1G009620 vs. TAIR10
Match: AT5G50410.1 (unknown protein)

HSP 1 Score: 235.7 bits (600), Expect = 3.1e-62
Identity = 137/257 (53.31%), Postives = 176/257 (68.48%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSD---VNPNDHGDQSQEWEIMARAWLCSFPEAKA-GSMEE 60
           MSN  ++T E  + ++    SD    N N   + SQEWE MARAW+ +FP+AKA  S  E
Sbjct: 1   MSNSSDKTLEDEKVQQQQLESDDKISNTNQRTEPSQEWETMARAWVSAFPDAKAVVSAGE 60

Query: 61  VEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHA 120
           VE WI +N  SLP +L+ MPRS++  RL+SIQ+ MR +     D ++Q  E DQ     A
Sbjct: 61  VETWIGTNLDSLPADLRHMPRSEIVDRLLSIQHYMRPTP--SSDQNEQNVEADQQH--PA 120

Query: 121 RFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCH 180
           RFQRTDQW+PVYSWLESL   E+VKSK+IS+WL  NP ++ +L SRHSRYHL HY+KKCH
Sbjct: 121 RFQRTDQWLPVYSWLESLDNGELVKSKDISEWLDANPEVKQELSSRHSRYHLTHYVKKCH 180

Query: 181 LKILKRKEKKKGSQLPDKSPLKVHKDVFMK-PALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           LKILKRKEKK   +L   + ++VHK+   K  A    D  S++PKDSD+Y TK+KEA R+
Sbjct: 181 LKILKRKEKKGLIRLSRATAMEVHKEFGEKHHATLSADPMSNIPKDSDLYRTKQKEAKRR 240

Query: 241 YEILVELEKLLASKFSK 253
           +EILVELEK LA  F+K
Sbjct: 241 FEILVELEKRLAPHFAK 253

[Close]
BLAST of CsaV3_1G009620 vs. TrEMBL
Match: tr|A0A0A0LUD5|A0A0A0LUD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 6.1e-145
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGVNN 259
           ELEKLLASKFSKSQGVNN
Sbjct: 241 ELEKLLASKFSKSQGVNN 258

[Close]
BLAST of CsaV3_1G009620 vs. TrEMBL
Match: tr|A0A1S4E072|A0A1S4E072_CUCME (uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.9e-134
Identity = 247/263 (93.92%), Postives = 250/263 (95.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGE--EEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+TREG E  E EDPKPSDVNP+DHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEG---DQGDLPH 120
           AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDE        LPH
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEAXXXXXXXLPH 120

Query: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYL KRKEAFRK
Sbjct: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAFRK 240

Query: 241 YEILVELEKLLASKFSKSQGVNN 259
           YEILVELEKLLA+KFSKSQGVNN
Sbjct: 241 YEILVELEKLLAAKFSKSQGVNN 263

[Close]
BLAST of CsaV3_1G009620 vs. TrEMBL
Match: tr|M5WA44|M5WA44_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.5e-84
Identity = 179/271 (66.05%), Postives = 202/271 (74.54%), Query Frame = 0 

Query: 1   MSNPVEQT------REGGEEEEDPKPSDVNPNDH-GDQSQEWEIMARAWLCSFPEAKAGS 60
           MSN  EQT         GEE E      V+ ND+  +QSQEWE MARAWLCSFPEAKA S
Sbjct: 1   MSNSAEQTLAIVAAATDGEEAE----QRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVS 60

Query: 61  MEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDL 120
           M+EVEAWIDSN   +P  +KSMPR DLCQRLISIQN MRL  Q       ++ E +QGD+
Sbjct: 61  MDEVEAWIDSNFDFIPEGIKSMPRPDLCQRLISIQNCMRLPNQ-------EEKEENQGDI 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTENP I++QLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTENPDIQEQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPD-KSPLKVHKDVFMK-PALPPR-----DSFSDLPKDSDIYL 240
           KCH+KILKR+EKKKG Q PD  +PLKVHKDV MK PA  P      +S  ++PKDSD+YL
Sbjct: 181 KCHMKILKRREKKKGVQQPDTPAPLKVHKDVLMKQPAQLPSPLSVCNSLINVPKDSDVYL 240

Query: 241 TKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
           TKRKEA +KYEIL ELEKLLA  F K +  N
Sbjct: 241 TKRKEALQKYEILAELEKLLAPTFLKREDGN 260

[Close]
BLAST of CsaV3_1G009620 vs. TrEMBL
Match: tr|I1KC32|I1KC32_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100820572 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.5e-82
Identity = 163/229 (71.18%), Postives = 182/229 (79.48%), Query Frame = 0 

Query: 31  QSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNL 90
           QS+EWE MARAWLCSFPE K  SM EVEAWIDSN ASLP  L+SMPR DLC RLIS QN 
Sbjct: 21  QSEEWETMARAWLCSFPEPKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLCHRLISFQNC 80

Query: 91  MRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLT 150
           MRL          Q+ E +Q DLPHARFQRTDQWIPVYSWLE+L +++VVKSKEISDWLT
Sbjct: 81  MRLP--------NQEREVNQLDLPHARFQRTDQWIPVYSWLETLDKEDVVKSKEISDWLT 140

Query: 151 ENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDK-SPLKVHKDVFMK-PA 210
           +NP +++QLCSRHSRYHLMHYIKKCHLKILKR+EKKKG + PDK S LKV KDV MK PA
Sbjct: 141 DNPKVQEQLCSRHSRYHLMHYIKKCHLKILKRREKKKGVEQPDKDSSLKVQKDVAMKHPA 200

Query: 211 LPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
            PP  S S+LPKDSD++L KR EA+RKYEIL+ELEKLL   F K   VN
Sbjct: 201 PPPCSSVSNLPKDSDLFLAKRNEAYRKYEILLELEKLLTPVFKKQPSVN 241

[Close]
BLAST of CsaV3_1G009620 vs. TrEMBL
Match: tr|A0A0B2RJM9|A0A0B2RJM9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040735 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.5e-82
Identity = 163/229 (71.18%), Postives = 182/229 (79.48%), Query Frame = 0 

Query: 31  QSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNL 90
           QS+EWE MARAWLCSFPE K  SM EVEAWIDSN ASLP  L+SMPR DLC RLIS QN 
Sbjct: 21  QSEEWETMARAWLCSFPEPKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLCHRLISFQNC 80

Query: 91  MRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLT 150
           MRL          Q+ E +Q DLPHARFQRTDQWIPVYSWLE+L +++VVKSKEISDWLT
Sbjct: 81  MRLP--------NQEREVNQLDLPHARFQRTDQWIPVYSWLETLDKEDVVKSKEISDWLT 140

Query: 151 ENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDK-SPLKVHKDVFMK-PA 210
           +NP +++QLCSRHSRYHLMHYIKKCHLKILKR+EKKKG + PDK S LKV KDV MK PA
Sbjct: 141 DNPKVQEQLCSRHSRYHLMHYIKKCHLKILKRREKKKGVEQPDKDSSLKVQKDVAMKHPA 200

Query: 211 LPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
            PP  S S+LPKDSD++L KR EA+RKYEIL+ELEKLL   F K   VN
Sbjct: 201 PPPCSSVSNLPKDSDLFLAKRNEAYRKYEILLELEKLLTPVFKKQPSVN 241

The following BLAST results are available for this feature:
BLAST of CsaV3_1G009620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152526.19.3e-145100.00PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hy... [more]
XP_016901626.14.3e-13493.92PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo][more]
XP_022137036.13.7e-11784.77uncharacterized protein LOC111008597 isoform X1 [Momordica charantia][more]
XP_022994449.18.5e-11480.90uncharacterized protein LOC111490167 [Cucurbita maxima][more]
XP_023542742.14.8e-10978.65uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_1G009620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50410.13.1e-6253.31unknown protein[more]
BLAST of CsaV3_1G009620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G009620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LUD5|A0A0A0LUD5_CUCSA6.1e-145100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1[more]
tr|A0A1S4E072|A0A1S4E072_CUCME2.9e-13493.92uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=... [more]
tr|M5WA44|M5WA44_PRUPE3.5e-8466.05Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1[more]
tr|I1KC32|I1KC32_SOYBN2.5e-8271.18Uncharacterized protein OS=Glycine max OX=3847 GN=100820572 PE=4 SV=1[more]
tr|A0A0B2RJM9|A0A0B2RJM9_GLYSO2.5e-8271.18Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040735 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019835 cytolysis
biological_process GO:0050829 defense response to Gram-negative bacterium
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G009620.1CsaV3_1G009620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..115

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G009620CSPI01G09510Wild cucumber (PI 183967)cpicucB001
CsaV3_1G009620Cucsa.392060Cucumber (Gy14) v1cgycucB592
CsaV3_1G009620CmaCh18G003200Cucurbita maxima (Rimu)cmacucB0474
CsaV3_1G009620CmoCh18G002170Cucurbita moschata (Rifu)cmocucB0457
CsaV3_1G009620Cp4.1LG09g09580Cucurbita pepo (Zucchini)cpecucB0031
CsaV3_1G009620CsGy1G009540Cucumber (Gy14) v2cgybcucB002
CsaV3_1G009620Carg06794Silver-seed gourdcarcucB0529
CsaV3_1G009620Cla002616Watermelon (97103) v1cucwmB013
CsaV3_1G009620MELO3C002358Melon (DHL92) v3.5.1cucmeB024
CsaV3_1G009620ClCG03G003730Watermelon (Charleston Gray)cucwcgB038
CsaV3_1G009620Lsi02G005010Bottle gourd (USVL1VR-Ls)cuclsiB022
CsaV3_1G009620MELO3C002358.2Melon (DHL92) v3.6.1cucmedB022
CsaV3_1G009620Cla97C03G054870Watermelon (97103) v2cucwmbB030
CsaV3_1G009620Bhi08G001225Wax gourdcucwgoB035
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G009620Cucumber (Chinese Long) v3cuccucB003
CsaV3_1G009620Cucumber (Chinese Long) v3cuccucB010
CsaV3_1G009620Silver-seed gourdcarcucB0397
CsaV3_1G009620Silver-seed gourdcarcucB1046
CsaV3_1G009620Cucumber (Gy14) v2cgybcucB011
CsaV3_1G009620Cucumber (Gy14) v1cgycucB237
CsaV3_1G009620Cucurbita maxima (Rimu)cmacucB0078
CsaV3_1G009620Cucurbita maxima (Rimu)cmacucB0124
CsaV3_1G009620Cucurbita maxima (Rimu)cmacucB0235
CsaV3_1G009620Cucurbita moschata (Rifu)cmocucB0066
CsaV3_1G009620Cucurbita moschata (Rifu)cmocucB0110
CsaV3_1G009620Cucurbita moschata (Rifu)cmocucB0222
CsaV3_1G009620Cucurbita pepo (Zucchini)cpecucB0439
CsaV3_1G009620Cucurbita pepo (Zucchini)cpecucB0634
CsaV3_1G009620Cucurbita pepo (Zucchini)cpecucB0808
CsaV3_1G009620Wild cucumber (PI 183967)cpicucB015
CsaV3_1G009620Bottle gourd (USVL1VR-Ls)cuclsiB077
CsaV3_1G009620Melon (DHL92) v3.5.1cucmeB051
CsaV3_1G009620Melon (DHL92) v3.6.1cucmedB048
CsaV3_1G009620Watermelon (Charleston Gray)cucwcgB080
CsaV3_1G009620Watermelon (97103) v1cucwmB098
CsaV3_1G009620Watermelon (97103) v2cucwmbB071