CmaCh18G003200 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh18G003200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibonucleoside-diphosphate reductase subunit beta
LocationCma_Chr18 : 1706749 .. 1710142 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTCTTCAACTTCTAGATTTGTGATGCTACAAAAATTTTCGTTAATTGGATTTGTGAAGACGATGCAGGAAATCGCAATCGAAGCAGTTTAATCTGAGAGAAGGGCGAGAAAAATGTCGAATCCTGCGGAACAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAACCATGCCTCTTTACCTGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTCATTTCTATCCAGAATTTAATGAGACTTTCCGCTCAGGTTACGATCATTCACAATACTTTCTCTCTTGCATTATTATTGAAACATGCTGTTGTTGTTCTTTATGATCTGTTATAGTGTTGGATGAAAGTCCCAATTAATTTAGGGAATGATCTTGGATTTATAATCAAGAAATATTATCTCATTTGGCTTGAGGCCTTTTGGGGAAAAGTGAACAATATCATACTATTGCGGAGAGTCGTGTTCATCTAACATAGTATCAGAGCCATGCCCTAAACTTAGCCTTGTCAATAGAATCTTCAAATGTCGAACAAAGGACTTCAAAAGAAAAAGGAGTCGAGACTCCTCGAAGGCATGGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAACCTTGATTAAGGGGAGACGTACTTTGTTCGAGGGGAGGTGTTGGATGAAAGTCTCACGTTGGCTAATTTAGGGAATAATCATGAGTTTATAATCAAGGAATACTATCTCCATTGGTATGAGACATTTTGGGGAAGCCCAAAGCAAAACCATGAGAGTTTATGCTCAAAGTAGACAATATCATATTATTGTGGACAGTCGTGTTCATCTAACCATCCGAACTTGGGATCTTTTATCTTTAGAAAGAGCTTTTAGAGCCTTAGAGGAAGATTGGCAAATGCTTATGACACTCTAATACCAGGCCATTCAGTTTGATTCATGTAGCTTTTATTTCAGCTTTTAAGAGCCTGGATTGTTATGGTTTTTGTTTCAGAGGTAGTTTTCCATGCAAACCCACCTGTGTCTTTACATAATACTCCAGTGTTCAAATTACTATTCAGGCTTCGTTGGCTTGATATTTGTCACAAAGTGGTCTTAGGATTTCTCTTTGTTATGGATAAATAATCCTCAATCATGATAACTCCAAACATTTCAGAAAAAAACCCTCGTAAACTATAAGTCAAGCTGCTTCATTCCTTGAGAACCGCTCACCCCTTCACATAGGAAAGGACTTGTGCTACCCCACCCCAAGCAGCGGTGGGGGTGCCTATCAACATGGCGGGGAAGCACGGCTATCCCATACTTGGCTAGACCCATTCCATTGAGGCTGGATGATCTTTGCATCTTCCTGATTCAGGTTATGGATTTTTTGAGTTAACAACATGTGGGTAGATAATTCAAACCTTTGAGCTCTTGGTTGAGAGTATATTGACTTAACCCGTTCGAGTTATGTTTCGGTTAGAAATTCAGTGAACGATTAAGTAAAATGTAGTGTCTTTCCCCTCTTGTCCTCCCATTTAGCCATTCAATCTGTGGTGGTGCATTTTTATTTATTTATTTATTTATTTTTAATTATTATGAAAACTATGGTTTGAAATGTCTCCTTCCAATCAAATTATGTTCCATGACAGGGAAAGGAAGAGATTCAGGGTGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGACCAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTTTATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTGACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGTATCTAAATGAGTTTCTTCTGTCTCATGAACTGATTGAATCGTCTAAGTACTGCCCAATTTCCATGCTCCTTGGTAAATGATTCTACTGATGATCTTGGCCTGTGTTCTTAAGTTCTTCAATGAATAGTTTGTGAAGAAATCTCATATGTAAACCGATGAATTTGAGCCTTGTGGGTTTATTTTGTCACGGAATTTTATTGTTTCTTGAGCAGGGTTCTCAGCTGCCTGAAAAATCTCCTCACAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGTAAACTTTTCCAGCACTCTATATTTTTCTTAAATCCGAAGTTTATGCTTGAAGATATCTTGTCCCAGTCACCTTTCTTACAAATTTACTTATCGGAACGACCCAGACCTACCACCAGCAGACAGATATTGTCATCTTTGAGTATTTCCTTTTGAGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACACTCTTTTAAAGCGTCTTTTGTTCTCCTCCCCAATCAATGTGGGATATCATAGTTATATTCAGAATCAGTTTCGGGAGACAATAGTCCTTAAACCTTTCAAATTACTGACCACACCACTCCGAGCGTGAATTTTACATGAAGTTTACTTGTGTATTGCAGGCGATTCATTTAGCGATCTACCGAAAGACAGCGACGTATATTTAGCAAAACGGAAGGAAGCGTTTCGAAAATACGAAATGTAAGCTTACATTCCGACGTTTTTGCATCTTTTTTTTTTTGTTAAATCACTCCTTGGTTTCAAAGAAAATGGGTTGATTTGATCATAAATTTGGCTGAATCTTTTCAGATTAGTGGAGTTGGAGAAGTTGCTTTCCACTAACCTTTGCAAGTCTGAAGGAGTCAAATGATTGGTGAAACTTTGGGAACTGCCATCACACTGCTCTGCTGCGTATGGGACATAGGACCAAGTTGTAAGCCATTGCAGGTTTTTTTTTACCTTGTTCACTGCTGAATCTTGGTGGCCCCATTGCTCTGTTTTCCTTCTTGGTGGCTAATGTATTAGAAATTTAAGTCATTCCTTGTAAAATGTTGATATCAATTCGATCATGTATGGGCATACCGACTAGTTTTAGATAGTTTTGGAGAATACTTTTTTTTGCTACGATATTTGTCGGTTTGCGTTTTGTAGAACGAGGAATACATACCAAATTGTAAATTTGGTTCCCGTCCGTCCGTGTTTATAAAGTTAGAATTTTATTATTATAGTTTGATGAATTCCCATCCGTACCAAATTGTAAGTTGTAAATTTGCTTTATGATTTGATAAAATATTCGGATCAGAC

mRNA sequence

TTGTTCTTCAACTTCTAGATTTGTGATGCTACAAAAATTTTCGTTAATTGGATTTGTGAAGACGATGCAGGAAATCGCAATCGAAGCAGTTTAATCTGAGAGAAGGGCGAGAAAAATGTCGAATCCTGCGGAACAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAACCATGCCTCTTTACCTGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTCATTTCTATCCAGAATTTAATGAGACTTTCCGCTCAGGGAAAGGAAGAGATTCAGGGTGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGACCAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTTTATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTGACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGAAAAATCTCCTCACAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGCGATTCATTTAGCGATCTACCGAAAGACAGCGACGTATATTTAGCAAAACGGAAGGAAGCGTTTCGAAAATACGAAATATTAGTGGAGTTGGAGAAGTTGCTTTCCACTAACCTTTGCAAGTCTGAAGGAGTCAAATGATTGGTGAAACTTTGGGAACTGCCATCACACTGCTCTGCTGCGTATGGGACATAGGACCAAGTTGTAAGCCATTGCAGGTTTTTTTTTACCTTGTTCACTGCTGAATCTTGGTGGCCCCATTGCTCTGTTTTCCTTCTTGGTGGCTAATGTATTAGAAATTTAAGTCATTCCTTGTAAAATGTTGATATCAATTCGATCATGTATGGGCATACCGACTAGTTTTAGATAGTTTTGGAGAATACTTTTTTTTGCTACGATATTTGTCGGTTTGCGTTTTGTAGAACGAGGAATACATACCAAATTGTAAATTTGGTTCCCGTCCGTCCGTGTTTATAAAGTTAGAATTTTATTATTATAGTTTGATGAATTCCCATCCGTACCAAATTGTAAGTTGTAAATTTGCTTTATGATTTGATAAAATATTCGGATCAGAC

Coding sequence (CDS)

ATGTCGAATCCTGCGGAACAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAACCATGCCTCTTTACCTGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTCATTTCTATCCAGAATTTAATGAGACTTTCCGCTCAGGGAAAGGAAGAGATTCAGGGTGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGACCAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTTTATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTGACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGAAAAATCTCCTCACAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGCGATTCATTTAGCGATCTACCGAAAGACAGCGACGTATATTTAGCAAAACGGAAGGAAGCGTTTCGAAAATACGAAATATTAGTGGAGTTGGAGAAGTTGCTTTCCACTAACCTTTGCAAGTCTGAAGGAGTCAAATGA

Protein sequence

MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSEGVK
Homology
[Close]
BLAST of CmaCh18G003200 vs. TrEMBL
Match: A0A0A0LUD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050460 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-119
Identity = 224/267 (83.90%), Postives = 236/267 (88.39%), Query Frame = 1 

Query: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I   Q       D+GDQGDL
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQ-------DEGDQGDL 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240
           KCHLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLPD----KSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240

Query: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 264
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLASKFSKSQGV 256

[Close]
BLAST of CmaCh18G003200 vs. TrEMBL
Match: V7AX78_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G166500g PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.9e-79
Identity = 162/242 (66.94%), Postives = 182/242 (75.21%), Query Frame = 1 

Query: 23  DQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLIS 82
           +Q   S+EWE MARAWL SFPEAK  SM EVEAWIDSN ASLP  L+SMPR DL  RLIS
Sbjct: 34  EQDQQSEEWETMARAWLCSFPEAKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLSNRLIS 93

Query: 83  IQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRTDQWIPVYSWLESLQQDEV 142
            QN +RL  Q +E                 Q DLPHARFQRTDQWIPVYSWLE+L ++EV
Sbjct: 94  FQNCIRLPNQERE---------------ASQLDLPHARFQRTDQWIPVYSWLETLDKEEV 153

Query: 143 VKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPEKSPHKS 202
           VKSKEISDWLTENP +++QLCSRHSRYHLMHYIKKCHLKILKR++KKKG + P+K    S
Sbjct: 154 VKSKEISDWLTENPKVQEQLCSRHSRYHLMHYIKKCHLKILKRRDKKKGVEQPDKD---S 213

Query: 203 PLKVHKDVVMK-PALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSE 262
           PLKV KDVVMK PA  P  S S+LPKDSD+YLAK+ EA+RKYEILVELEKLLS    K  
Sbjct: 214 PLKVQKDVVMKHPAPLPSSSVSNLPKDSDLYLAKKNEAYRKYEILVELEKLLSPTFSKQP 257

Query: 263 GV 264
            +
Sbjct: 274 SI 257

[Close]
BLAST of CmaCh18G003200 vs. TrEMBL
Match: M5WA44_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009434mg PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79
Identity = 170/274 (62.04%), Postives = 196/274 (71.53%), Query Frame = 1 

Query: 1   MSNPAEQI-------QEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEV 60
           MSN AEQ         +G E +    +  + S+ SQEWE MARAWL SFPEAKA SM+EV
Sbjct: 1   MSNSAEQTLAIVAAATDGEEAEQRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVSMDEV 60

Query: 61  EAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQ 120
           EAWIDSN   +P  +KSMPR DLCQRLISIQN MRL  Q ++E               +Q
Sbjct: 61  EAWIDSNFDFIPEGIKSMPRPDLCQRLISIQNCMRLPNQEEKE--------------ENQ 120

Query: 121 GDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           GD+PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTENP I++QLCSRHSRYHLMH
Sbjct: 121 GDIPHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTENPDIQEQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMK-PALPPR-----DSFSDLPK 240
           YIKKCH+KILKR+EKKKG Q P+     +PLKVHKDV+MK PA  P      +S  ++PK
Sbjct: 181 YIKKCHMKILKRREKKKGVQQPDTP---APLKVHKDVLMKQPAQLPSPLSVCNSLINVPK 240

Query: 241 DSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSE 262
           DSDVYL KRKEA +KYEIL ELEKLL+    K E
Sbjct: 241 DSDVYLTKRKEALQKYEILAELEKLLAPTFLKRE 257

[Close]
BLAST of CmaCh18G003200 vs. TrEMBL
Match: A0A0L9UCW5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g073400 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.6e-78
Identity = 162/260 (62.31%), Postives = 191/260 (73.46%), Query Frame = 1 

Query: 5   AEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASL 64
           A++ ++  EP+  +    +Q   S+EWE MARAWL SFPEAK  SM EVEAWIDSN ASL
Sbjct: 12  AQEPEQEQEPE-QEQEQEEQDQQSEEWETMARAWLCSFPEAKEVSMAEVEAWIDSNLASL 71

Query: 65  PGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRT 124
           P  L+SMPR DL  RLIS QN +RL  Q +E                 Q DLP ARFQRT
Sbjct: 72  PEGLRSMPRPDLSNRLISFQNCIRLPNQEQE---------------ASQLDLPQARFQRT 131

Query: 125 DQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILK 184
           DQWIPVYSWLE+L +DEVVKSKEISDWLTENP +++QLCSRHSRYHLMHYIKKCHLKILK
Sbjct: 132 DQWIPVYSWLETLDKDEVVKSKEISDWLTENPKVQEQLCSRHSRYHLMHYIKKCHLKILK 191

Query: 185 RKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALP-PRDSFSDLPKDSDVYLAKRKEAFRKY 244
           R++KKKG + P+K    SPLK+ KDVVMK + P P +S S+LPKDSD++LAK+ EA+RKY
Sbjct: 192 RRDKKKGLEQPDKD---SPLKIQKDVVMKHSAPLPSNSVSNLPKDSDLFLAKKNEAYRKY 251

Query: 245 EILVELEKLLSTNLCKSEGV 264
           EILVELEKLLS    K   +
Sbjct: 252 EILVELEKLLSPAFSKQPSI 252

[Close]
BLAST of CmaCh18G003200 vs. TrEMBL
Match: A0A0B2RJM9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_040735 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 159/243 (65.43%), Postives = 182/243 (74.90%), Query Frame = 1 

Query: 22  SDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLI 81
           ++    S+EWE MARAWL SFPE K  SM EVEAWIDSN ASLP  L+SMPR DLC RLI
Sbjct: 16  AEAEQQSEEWETMARAWLCSFPEPKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLCHRLI 75

Query: 82  SIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRTDQWIPVYSWLESLQQDE 141
           S QN MRL  Q +E                +Q DLPHARFQRTDQWIPVYSWLE+L +++
Sbjct: 76  SFQNCMRLPNQEREV---------------NQLDLPHARFQRTDQWIPVYSWLETLDKED 135

Query: 142 VVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPEKSPHK 201
           VVKSKEISDWLT+NP +++QLCSRHSRYHLMHYIKKCHLKILKR+EKKKG + P+K    
Sbjct: 136 VVKSKEISDWLTDNPKVQEQLCSRHSRYHLMHYIKKCHLKILKRREKKKGVEQPDKD--- 195

Query: 202 SPLKVHKDVVMK-PALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILVELEKLLSTNLCKS 261
           S LKV KDV MK PA PP  S S+LPKDSD++LAKR EA+RKYEIL+ELEKLL+    K 
Sbjct: 196 SSLKVQKDVAMKHPAPPPCSSVSNLPKDSDLFLAKRNEAYRKYEILLELEKLLTPVFKKQ 240

Query: 262 EGV 264
             V
Sbjct: 256 PSV 240

[Close]
BLAST of CmaCh18G003200 vs. TAIR10
Match: AT5G50410.1 (AT5G50410.1 unknown protein)

HSP 1 Score: 221.5 bits (563), Expect = 6.3e-58
Identity = 131/269 (48.70%), Postives = 176/269 (65.43%), Query Frame = 1 

Query: 1   MSNPAEQIQEGAEPKPSDL-------NPSDQSDHSQEWEVMARAWLSSFPEAKAG-SMEE 60
           MSN +++  E  + +   L       N + +++ SQEWE MARAW+S+FP+AKA  S  E
Sbjct: 1   MSNSSDKTLEDEKVQQQQLESDDKISNTNQRTEPSQEWETMARAWVSAFPDAKAVVSAGE 60

Query: 61  VEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGD 120
           VE WI +N  SLP +L+ MPRS++  RL+SIQ+ MR +              +D+ +Q  
Sbjct: 61  VETWIGTNLDSLPADLRHMPRSEIVDRLLSIQHYMRPTPS------------SDQNEQNV 120

Query: 121 QGDLPH-ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHL 180
           + D  H ARFQRTDQW+PVYSWLESL   E+VKSK+IS+WL  NP ++ +L SRHSRYHL
Sbjct: 121 EADQQHPARFQRTDQWLPVYSWLESLDNGELVKSKDISEWLDANPEVKQELSSRHSRYHL 180

Query: 181 MHYIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMK-PALPPRDSFSDLPKDSD 240
            HY+KKCHLKILKRKEKK   +L       + ++VHK+   K  A    D  S++PKDSD
Sbjct: 181 THYVKKCHLKILKRKEKKGLIRL----SRATAMEVHKEFGEKHHATLSADPMSNIPKDSD 240

Query: 241 VYLAKRKEAFRKYEILVELEKLLSTNLCK 260
           +Y  K+KEA R++EILVELEK L+ +  K
Sbjct: 241 LYRTKQKEAKRRFEILVELEKRLAPHFAK 253

[Close]
BLAST of CmaCh18G003200 vs. NCBI nr
Match: gi|449469639|ref|XP_004152526.1| (PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 2.1e-119
Identity = 224/267 (83.90%), Postives = 236/267 (88.39%), Query Frame = 1 

Query: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I   Q       D+GDQGDL
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQ-------DEGDQGDL 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240
           KCHLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLPD----KSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240

Query: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 264
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLASKFSKSQGV 256

[Close]
BLAST of CmaCh18G003200 vs. NCBI nr
Match: gi|645268313|ref|XP_008239471.1| (PREDICTED: uncharacterized protein LOC103338065 isoform X2 [Prunus mume])

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-79
Identity = 171/274 (62.41%), Postives = 196/274 (71.53%), Query Frame = 1 

Query: 1   MSNPAEQ-------IQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEV 60
           MSN AEQ         EG E +    +  + S+ SQEWE MARAWL SFPEAKA SM+EV
Sbjct: 1   MSNSAEQNLAIVAAATEGEEAEQRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVSMDEV 60

Query: 61  EAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQ 120
           EAWIDSN   +P  +KSMPR DLCQRLISIQN MRL  Q ++E               +Q
Sbjct: 61  EAWIDSNFDFIPEGIKSMPRPDLCQRLISIQNCMRLPNQEEKE--------------ENQ 120

Query: 121 GDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           GD+PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTENP I++QLCSRHSRYHLMH
Sbjct: 121 GDIPHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTENPDIQEQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMK-PALPPR-----DSFSDLPK 240
           YIKKCH+KILKR+EKKKG Q P+     +PLKVHKDV+MK PA  P      +S  ++PK
Sbjct: 181 YIKKCHMKILKRREKKKGVQQPDTP---APLKVHKDVLMKQPAQLPSPLSVCNSLINVPK 240

Query: 241 DSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSE 262
           DSDVYL KRKEA +KYEIL ELEKLL+    K E
Sbjct: 241 DSDVYLTKRKEALQKYEILAELEKLLAPTFLKRE 257

[Close]
BLAST of CmaCh18G003200 vs. NCBI nr
Match: gi|593328976|ref|XP_007137915.1| (hypothetical protein PHAVU_009G166500g [Phaseolus vulgaris])

HSP 1 Score: 303.9 bits (777), Expect = 2.7e-79
Identity = 162/242 (66.94%), Postives = 182/242 (75.21%), Query Frame = 1 

Query: 23  DQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLIS 82
           +Q   S+EWE MARAWL SFPEAK  SM EVEAWIDSN ASLP  L+SMPR DL  RLIS
Sbjct: 34  EQDQQSEEWETMARAWLCSFPEAKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLSNRLIS 93

Query: 83  IQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRTDQWIPVYSWLESLQQDEV 142
            QN +RL  Q +E                 Q DLPHARFQRTDQWIPVYSWLE+L ++EV
Sbjct: 94  FQNCIRLPNQERE---------------ASQLDLPHARFQRTDQWIPVYSWLETLDKEEV 153

Query: 143 VKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPEKSPHKS 202
           VKSKEISDWLTENP +++QLCSRHSRYHLMHYIKKCHLKILKR++KKKG + P+K    S
Sbjct: 154 VKSKEISDWLTENPKVQEQLCSRHSRYHLMHYIKKCHLKILKRRDKKKGVEQPDKD---S 213

Query: 203 PLKVHKDVVMK-PALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSE 262
           PLKV KDVVMK PA  P  S S+LPKDSD+YLAK+ EA+RKYEILVELEKLLS    K  
Sbjct: 214 PLKVQKDVVMKHPAPLPSSSVSNLPKDSDLYLAKKNEAYRKYEILVELEKLLSPTFSKQP 257

Query: 263 GV 264
            +
Sbjct: 274 SI 257

[Close]
BLAST of CmaCh18G003200 vs. NCBI nr
Match: gi|595847910|ref|XP_007209423.1| (hypothetical protein PRUPE_ppa009434mg [Prunus persica])

HSP 1 Score: 302.8 bits (774), Expect = 6.1e-79
Identity = 170/274 (62.04%), Postives = 196/274 (71.53%), Query Frame = 1 

Query: 1   MSNPAEQI-------QEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEV 60
           MSN AEQ         +G E +    +  + S+ SQEWE MARAWL SFPEAKA SM+EV
Sbjct: 1   MSNSAEQTLAIVAAATDGEEAEQRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVSMDEV 60

Query: 61  EAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQ 120
           EAWIDSN   +P  +KSMPR DLCQRLISIQN MRL  Q ++E               +Q
Sbjct: 61  EAWIDSNFDFIPEGIKSMPRPDLCQRLISIQNCMRLPNQEEKE--------------ENQ 120

Query: 121 GDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           GD+PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTENP I++QLCSRHSRYHLMH
Sbjct: 121 GDIPHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTENPDIQEQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMK-PALPPR-----DSFSDLPK 240
           YIKKCH+KILKR+EKKKG Q P+     +PLKVHKDV+MK PA  P      +S  ++PK
Sbjct: 181 YIKKCHMKILKRREKKKGVQQPDTP---APLKVHKDVLMKQPAQLPSPLSVCNSLINVPK 240

Query: 241 DSDVYLAKRKEAFRKYEILVELEKLLSTNLCKSE 262
           DSDVYL KRKEA +KYEIL ELEKLL+    K E
Sbjct: 241 DSDVYLTKRKEALQKYEILAELEKLLAPTFLKRE 257

[Close]
BLAST of CmaCh18G003200 vs. NCBI nr
Match: gi|920697311|gb|KOM40536.1| (hypothetical protein LR48_Vigan04g073400 [Vigna angularis])

HSP 1 Score: 299.7 bits (766), Expect = 5.1e-78
Identity = 162/260 (62.31%), Postives = 191/260 (73.46%), Query Frame = 1 

Query: 5   AEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSNHASL 64
           A++ ++  EP+  +    +Q   S+EWE MARAWL SFPEAK  SM EVEAWIDSN ASL
Sbjct: 12  AQEPEQEQEPE-QEQEQEEQDQQSEEWETMARAWLCSFPEAKEVSMAEVEAWIDSNLASL 71

Query: 65  PGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGDQVDRADRADQGDQGDLPHARFQRT 124
           P  L+SMPR DL  RLIS QN +RL  Q +E                 Q DLP ARFQRT
Sbjct: 72  PEGLRSMPRPDLSNRLISFQNCIRLPNQEQE---------------ASQLDLPQARFQRT 131

Query: 125 DQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILK 184
           DQWIPVYSWLE+L +DEVVKSKEISDWLTENP +++QLCSRHSRYHLMHYIKKCHLKILK
Sbjct: 132 DQWIPVYSWLETLDKDEVVKSKEISDWLTENPKVQEQLCSRHSRYHLMHYIKKCHLKILK 191

Query: 185 RKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALP-PRDSFSDLPKDSDVYLAKRKEAFRKY 244
           R++KKKG + P+K    SPLK+ KDVVMK + P P +S S+LPKDSD++LAK+ EA+RKY
Sbjct: 192 RRDKKKGLEQPDKD---SPLKIQKDVVMKHSAPLPSNSVSNLPKDSDLFLAKKNEAYRKY 251

Query: 245 EILVELEKLLSTNLCKSEGV 264
           EILVELEKLLS    K   +
Sbjct: 252 EILVELEKLLSPAFSKQPSI 252

The following BLAST results are available for this feature:
BLAST of CmaCh18G003200 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh18G003200 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUD5_CUCSA1.4e-11983.90Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050460 PE=4 SV=1[more]
V7AX78_PHAVU1.9e-7966.94Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G166500g PE=4 SV=1[more]
M5WA44_PRUPE4.2e-7962.04Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009434mg PE=4 SV=1[more]
A0A0L9UCW5_PHAAN3.6e-7862.31Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g073400 PE=4 SV=1[more]
A0A0B2RJM9_GLYSO1.4e-7765.43Uncharacterized protein OS=Glycine soja GN=glysoja_040735 PE=4 SV=1[more]
BLAST of CmaCh18G003200 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50410.16.3e-5848.70 unknown protein[more]
BLAST of CmaCh18G003200 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469639|ref|XP_004152526.1|2.1e-11983.90PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus][more]
gi|645268313|ref|XP_008239471.1|2.7e-7962.41PREDICTED: uncharacterized protein LOC103338065 isoform X2 [Prunus mume][more]
gi|593328976|ref|XP_007137915.1|2.7e-7966.94hypothetical protein PHAVU_009G166500g [Phaseolus vulgaris][more]
gi|595847910|ref|XP_007209423.1|6.1e-7962.04hypothetical protein PRUPE_ppa009434mg [Prunus persica][more]
gi|920697311|gb|KOM40536.1|5.1e-7862.31hypothetical protein LR48_Vigan04g073400 [Vigna angularis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019835 cytolysis
biological_process GO:0050829 defense response to Gram-negative bacterium
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G003200.1CmaCh18G003200.1mRNA