Carg06794 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06794
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ribonucleoside-diphosphate reductase subunit beta
Location	Cucurbita_argyrosperma_scaffold_012 : 1042742 .. 1045869 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAATCCTGCGGAGCAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGTTGAAGCTTGGATTGACTCCAACCATGCCTCTTTACCTGGAAACCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGAGGCTCATTTCTATCCAGAATTTAATGAGACTTTCCGCTCAGGTTACGATCATTCACAATACTTTCTCTCTTGCATTATTATTCAAGGATGGACGACTAATTTAGGGAATGATCATGAGTTTATATCCAAGGAATACTATCTCTATTCATATGAGGCCTTTTTGAAAAGCACAAATCAAATTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTAGAGTGTCTTGTTCATCTAACATAGTATTAAAGTCATGCCCTAAACTTAGCCATGTCAATAGAATCCTCAAATGTCAAACAAAGGACTCCAAAAGCAAAACGAGTCAAACTCCTCGAAGGCATGGTAAAAAATGACTAAGACTCCAAAAGAAAAGGAGTCGAACCTCGATTAAGGGGAGTCGTAGTTTATTCGAGGGGAGGTGTTGGATGAAAATCCCACATCGGCTAATTTAGGGAATGATTATGGGTTTATAATCAAGGAATACTATCTCCATTGGTACGAGGCATTTTGGGGAAGCCCAAAGCAAAACCATGAAAGCTTATGCTCAAAGTAGACAATATCATACCATTGTGGAGAGTCGTGTTTAGAAGTTGGGATCTTTTATCTTTAGAAAGCGCTTTTAGAGCCTTAGAGGGAGATTGGCAAATGCTTATGACACTCCAATACCAGGCCATTCAGTTTGATTCATGTAGCTTCTATTTCAGCTTTTAAGAGCCTGGATTGTTATGGTTTTTGTTTCAGAGATAGTTTTCCATGCAAACCAACCTGTGTGTTTACATAATACTCTTCAGTGTTCAAATTGCTATTCAGGCTTCGTTGGTTTGATATTTGTCACAAAGGGGTGTTAGGATTTCTCCTGTTATGGATAAATAATCCTCAATCATGTTAACTCCAAATATTTCAGAAAAAAACCCTCGTAAACTATAAGTCAAGCTGCTTCGTTCCTTGAGAACCGCTCACCTCTTCACATAGGAAAGGACTTATGCTACCCCACCCCAAGCTGTGGTGGGGGCGCCCATCAACATGGCGGGGAAGTCTAGTGGAACGACTATCCCATACTTGGCTAGGCTCATTCCATTGAGGCTTGACGATCTTTGCATCTTCCTGATTCAGGTTATTGATTTTTTGAGTTAACAACATATGGGTAGATAATTCAAACCTTTGGGCTCTTGGTTGAGAGTATATTGACTTAACCCGTTCGAGTTATGTTTCGGTTGGAAATTCGGTGAATGATTAACTAAAATGTAGTGCCTTTCCCCTCTTGTCCTCCCATTTAGCCATTCAATCTGTTGTGGTGCATTTTTTTTCTTGTTTTTTTGTTATGAAAACTATGGTTTGAAATGTCTCCTTCCAATCAAATTATGTTCCATGACAGGGAAAGGAAGAGATTCAGGGCGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGAACAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTATATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTAACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGTATCTAAATGAGTTTCTTCTGTCTTATGAACTGATTGAATCGGCTAAGAACTGCCCAATTTCCATGTCTCCTTGGTAAATGATTCTACTGATGATCTTGGCCTGTGTTCTTAAGTTCTTCAATGAATAGTTTGTGATGAAATCTCATATGTAAACTGATGAATTTGAGCCTTTTGGGTTTATTTTGTAACGAAATTTTATTGTTTCTTGGGCAGGGTTCTCAGCTGCCTGAAAAATCTCCTCAAAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGTAAAACCTTTTCAGCATGCTATATTTTTCTTAAATCCCAAGTTTATCACCTTTCTTACAAATTTACTTAAAGTCATGGGAACGACCCAAACTCACCGCTAGCAAATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTGCTAGGGGAAGGTTTCCACATCCTTATAAAAGGTTTTTTTGGTCTCCTCCTCAACCAATGTGGGGCATCACGACAATGGTCCTTAAACCTTTCGAATTCCTGACCACACGACTCCGTGCGTGAATTTTACGTGAATTTTACTTGTGTATTGCAGGTGATTCATTTAGCGATCTACCGAAAGACAGCGACGTATATTTAGCAAAACGGAAGGAAGCGTTTCGAAAATACGAAATGTAAGCTTACAATCCGACGTTTTTGCATCTTTTTTTTTTTTTTTTTGTTAAATCACTCCTTGGTTTCAAAGAAAATGGGTTGAGTTGATCATAAATTTGGGTGAATCTTTTCAGATTAGTGGAGTTGGAGAAGTTGCTTTCCACCAACCTTTGCAAGTCTGAAGGAGTCAAATAATTGGAGAAACTTTGGGAACTGCCATCACACTGCTCTGCTGCGTATTATGGGACATAGGACCAAGTTGTAAGCCATTGCAGGTTTTTTTTTACCTTGTGCACTGCTGAATCTTGTGGCCCCATTGCTCTGTTTTCCTTCTTGGTGGCTAATCTATTAGATATTTAAGTCATACCTTGTAAAATGTTGATATCGATCGATCGGGCGTACCGACTAGTTTTAGATAGTTCTGGAGAATACTTTTTTTTTCTACGATATTTGTCGGTTTGCGTTTTGTAGAATGAGGAACACATACCAAATTGTAAATTTGGTTCCGGTCCGTGTTTATAAAGTTAGAATTTTATTCTTAT

mRNA sequence

ATGTCGAATCCTGCGGAGCAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGAAAGGACTTATGCTACCCCACCCCAAGCTGTGGTGGGGGCGCCCATCAACATGGCGGGGAAGTCTAGTGGAACGACTATCCCATACTTGGCTAGGCTCATTCCATTGAGGCTTGACGATCTTTGCATCTTCCTGATTCAGGGAAAGGAAGAGATTCAGGGCGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGAACAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTATATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTAACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGAAAAATCTCCTCAAAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGTAAAACCTTTTCAGCATGCTATATTTTTCTTAAATCCCAAGTTTATCACCTTTCTTACAAATTTACTTAAAGTCATGGGAACGACCCAAACTCACCGCTAGCAAATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTGCTAGGGGAAGGTTTCCACATCCTTATAAAAGGTTTTTTTGGTCTCCTCCTCAACCAATGTGGGGCATCACGACAATGGTCCTTAAACCTTTCGAATTCCTGACCACACGACTCCGTGCGTGAATTTTACGTGAATTTTACTTGTGTATTGCAGGTGATTCATTTAGCGATCTACCGAAAGACAGCGACGTATATTTAGCAAAACGGAAGGAAGCGTTTCGAAAATACGAAATATTAGTGGAGTTGGAGAAGTTGCTTTCCACCAACCTTTGCAAGTCTGAAGGAGTCAAATAATTGGAGAAACTTTGGGAACTGCCATCACACTGCTCTGCTGCGTATTATGGGACATAGGACCAAGTTGTAAGCCATTGCAGGTTTTTTTTTACCTTGTGCACTGCTGAATCTTGTGGCCCCATTGCTCTGTTTTCCTTCTTGGTGGCTAATCTATTAGATATTTAAGTCATACCTTGTAAAATGTTGATATCGATCGATCGGGCGTACCGACTAGTTTTAGATAGTTCTGGAGAATACTTTTTTTTTCTACGATATTTGTCGGTTTGCGTTTTGTAGAATGAGGAACACATACCAAATTGTAAATTTGGTTCCGGTCCGTGTTTATAAAGTTAGAATTTTATTCTTAT

Coding sequence (CDS)

ATGTCGAATCCTGCGGAGCAAATCCAAGAAGGAGCAGAGCCTAAACCATCTGATCTAAACCCTAGCGACCAGAGCGATCACTCTCAAGAATGGGAAGTCATGGCGCGAGCGTGGCTTTCCTCCTTCCCCGAGGCCAAAGCTGGGTCCATGGAAGAGGAAAGGACTTATGCTACCCCACCCCAAGCTGTGGTGGGGGCGCCCATCAACATGGCGGGGAAGTCTAGTGGAACGACTATCCCATACTTGGCTAGGCTCATTCCATTGAGGCTTGACGATCTTTGCATCTTCCTGATTCAGGGAAAGGAAGAGATTCAGGGCGATCAGGTTGATCGAGCTGATCGGGCTGATCAGGGTGAACAGGGCGACCTTCCACATGCTCGATTTCAACGGACCGACCAGTGGATACCAGTATATTCTTGGTTAGAATCTCTACAACAAGATGAGGTTGTCAAGTCAAAGGAAATATCTGATTGGTTAACTGAAAATCCTTCCATCAGAGATCAGTTGTGTTCTAGACATTCTCGATATCATTTAATGCACTACATCAAAAAGTGTCATTTGAAGATATTGAAAAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGAAAAATCTCCTCAAAAGTCTCCTCTAAAAGTGCACAAGGATGTTGTGATGAAACCAGCATTGCCTCCACGTAAAACCTTTTCAGCATGCTATATTTTTCTTAAATCCCAAGTTTATCACCTTTCTTACAAATTTACTTAA

Protein sequence

MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPPQAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDQVDRADRADQGEQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPEKSPQKSPLKVHKDVVMKPALPPRKTFSACYIFLKSQVYHLSYKFT

Homology

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BLAST of Carg06794 vs. NCBI nr
Match: XP_022955309.1 (uncharacterized protein LOC111457310 [Cucurbita moschata])

HSP 1 Score: 296.6 bits (758), Expect = 7.9e-77
Identity = 187/230 (81.30%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPP 60
           MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEE   +    
Sbjct: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSN 60

Query: 61  QAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXXX 120
            A +   +    +S         RLI ++  +L     QGKEEIQG XXXXXXXXXXXXX
Sbjct: 61  HASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSAQGKEEIQGXXXXXXXXXXXXXX 120

Query: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH
Sbjct: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPR +FS
Sbjct: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRDSFS 223

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BLAST of Carg06794 vs. NCBI nr
Match: XP_022994449.1 (uncharacterized protein LOC111490167 [Cucurbita maxima])

HSP 1 Score: 296.6 bits (758), Expect = 7.9e-77
Identity = 176/230 (76.52%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPP 60
           MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEE   +    
Sbjct: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSN 60

Query: 61  QAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXXX 120
            A +   +    +S         RLI ++  +L     QGKEEIQG XXXXXXXXXXXXX
Sbjct: 61  HASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSAQGKEEIQGXXXXXXXXXXXXXX 120

Query: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH
Sbjct: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           YIKKCHLKILKRKEKKKGSQL           VHKDVVMKPALPPR +FS
Sbjct: 181 YIKKCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFS 223

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BLAST of Carg06794 vs. NCBI nr
Match: XP_023542742.1 (uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 296.6 bits (758), Expect = 7.9e-77
Identity = 187/230 (81.30%), Postives = 195/230 (84.78%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPP 60
           MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEE   +    
Sbjct: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAWIDSN 60

Query: 61  QAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXXX 120
            A +   +    +S         RLI ++  +L     QGKEEIQG XXXXXXXXXXXXX
Sbjct: 61  HASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSAQGKEEIQGXXXXXXXXXXXXXX 120

Query: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH
Sbjct: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPR +FS
Sbjct: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRDSFS 223

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BLAST of Carg06794 vs. NCBI nr
Match: XP_022137037.1 (uncharacterized protein LOC111008597 isoform X2 [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 1.6e-69
Identity = 159/236 (67.37%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPP 60
           MSNPAE+ Q G +PKPSDLNPSDQSDHSQEWE MARAWL SFPEA+AGSMEE   +    
Sbjct: 1   MSNPAEETQ-GEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAWIDSN 60

Query: 61  QAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXXX 120
            A +   +    +S         RLI ++  +L     QGKEEIQ         XXXXXX
Sbjct: 61  HASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSNQGKEEIQ---------XXXXXX 120

Query: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           XX PHARFQRTDQWIPVYSWLESLQ +EVVKSK+ISDWLTENPSIRDQLCSRHSRYHLMH
Sbjct: 121 XXLPHARFQRTDQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFSACYIFL 237
           YIKKCHLKILKRKEKKKGSQ+           VHKDV+MKPALPPRK F ACY+FL
Sbjct: 181 YIKKCHLKILKRKEKKKGSQM----PDKSPLKVHKDVLMKPALPPRKFFFACYVFL 215

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BLAST of Carg06794 vs. NCBI nr
Match: XP_022137036.1 (uncharacterized protein LOC111008597 isoform X1 [Momordica charantia])

HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66
Identity = 154/230 (66.96%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPP 60
           MSNPAE+ Q G +PKPSDLNPSDQSDHSQEWE MARAWL SFPEA+AGSMEE   +    
Sbjct: 1   MSNPAEETQ-GEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAWIDSN 60

Query: 61  QAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXXX 120
            A +   +    +S         RLI ++  +L     QGKEEIQ         XXXXXX
Sbjct: 61  HASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSNQGKEEIQ---------XXXXXX 120

Query: 121 XXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMH 180
           XX PHARFQRTDQWIPVYSWLESLQ +EVVKSK+ISDWLTENPSIRDQLCSRHSRYHLMH
Sbjct: 121 XXLPHARFQRTDQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMH 180

Query: 181 YIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           YIKKCHLKILKRKEKKKGSQ+           VHKDV+MKPALPPR +FS
Sbjct: 181 YIKKCHLKILKRKEKKKGSQM----PDKSPLKVHKDVLMKPALPPRDSFS 209

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BLAST of Carg06794 vs. TAIR10
Match: AT5G50410.1 (unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 86/208 (41.35%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MSNPAEQIQEGAEPKPSDL-------NPSDQSDHSQEWEVMARAWLSSFPEAKA-GSMEE 60
           MSN +++  E  + +   L       N + +++ SQEWE MARAW+S+FP+AKA  S  E
Sbjct: 1   MSNSSDKTLEDEKVQQQQLESDDKISNTNQRTEPSQEWETMARAWVSAFPDAKAVVSAGE 60

Query: 61  ERTYATPPQAVVGAPINMAGKSSGT----TIPYLARLIPLRLDDLCIFLIQGKEEIQGDX 120
             T+       + A +    +S       +I +  R  P           Q ++ ++ D 
Sbjct: 61  VETWIGTNLDSLPADLRHMPRSEIVDRLLSIQHYMRPTPSS--------DQNEQNVEADQ 120

Query: 121 XXXXXXXXXXXXXXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQ 180
                            ARFQRTDQW+PVYSWLESL   E+VKSK+IS+WL  NP ++ +
Sbjct: 121 QHP--------------ARFQRTDQWLPVYSWLESLDNGELVKSKDISEWLDANPEVKQE 180

Query: 181 LCSRHSRYHLMHYIKKCHLKILKRKEKK 197
           L SRHSRYHL HY+KKCHLKILKRKEKK
Sbjct: 181 LSSRHSRYHLTHYVKKCHLKILKRKEKK 186

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BLAST of Carg06794 vs. TrEMBL
Match: tr|A0A0A0LUD5|A0A0A0LUD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.0e-64
Identity = 144/234 (61.54%), Postives = 158/234 (67.52%), Query Frame = 0


Query: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTY 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEE   +
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  ATPPQAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXX 120
                A +   +    +S         RLI ++  +L     QGKE+I            
Sbjct: 61  IDSNHASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSTQGKEDIH-------KQQD 120

Query: 121 XXXXXXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRY 180
                  PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRY
Sbjct: 121 EGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRY 180

Query: 181 HLMHYIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           HLMHYIKKCHLKILKRKEKKKGSQL           VHKDV MKPALPPR +FS
Sbjct: 181 HLMHYIKKCHLKILKRKEKKKGSQL----PDKSPLKVHKDVFMKPALPPRDSFS 216

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BLAST of Carg06794 vs. TrEMBL
Match: tr|A0A1S4E072|A0A1S4E072_CUCME (uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 151/236 (63.98%), Postives = 165/236 (69.92%), Query Frame = 0


Query: 1   MSNPAEQIQEGAE------PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEER 60
           MSNP E+ +EG E      PKPSD+NPSD  D SQEWE+MARAWL SFPEAKAGSMEE  
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  TYATPPQAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXX 120
            +     A +   +    +S         RLI ++  +L     QGKE+I          
Sbjct: 61  AWIDSNHASLPGNLKSMPRSD-----LCQRLISIQ--NLMRLSTQGKEDIH----KQQDE 120

Query: 121 XXXXXXXXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHS 180
            XXXXXXX PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHS
Sbjct: 121 AXXXXXXXLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHS 180

Query: 181 RYHLMHYIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRKTFS 231
           RYHLMHYIKKCHLKILKRKEKKKGSQL           VHKDV MKPALPPR +FS
Sbjct: 181 RYHLMHYIKKCHLKILKRKEKKKGSQL----PDKSPLKVHKDVFMKPALPPRDSFS 221

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BLAST of Carg06794 vs. TrEMBL
Match: tr|M5WA44|M5WA44_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.0e-43
Identity = 120/250 (48.00%), Postives = 138/250 (55.20%), Query Frame = 0


Query: 1   MSNPAEQ-------IQEGAEPKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEE 60
           MSN AEQ         +G E +    +  + S+ SQEWE MARAWL SFPEAKA SM+E 
Sbjct: 1   MSNSAEQTLAIVAAATDGEEAEQRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVSMDEV 60

Query: 61  RTYATPPQAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLI-----------QGKE 120
             +                 S+   IP   + +P    DLC  LI           + KE
Sbjct: 61  EAWI---------------DSNFDFIPEGIKSMP--RPDLCQRLISIQNCMRLPNQEEKE 120

Query: 121 EIQGDXXXXXXXXXXXXXXXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTEN 180
           E QGD                PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTEN
Sbjct: 121 ENQGD---------------IPHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTEN 180

Query: 181 PSIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPA 233
           P I++QLCSRHSRYHLMHYIKKCH+KILKR+EKKKG Q            VHKDV+MK  
Sbjct: 181 PDIQEQLCSRHSRYHLMHYIKKCHMKILKRREKKKGVQ---QPDTPAPLKVHKDVLMKQP 215

[Close]

BLAST of Carg06794 vs. TrEMBL
Match: tr|A0A2P6P4X0|A0A2P6P4X0_ROSCH (Putative channel forming colicin cytotoxic OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0190221 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 109/213 (51.17%), Postives = 127/213 (59.62%), Query Frame = 0


Query: 22  SDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATPPQAVVGAPINMAGKSSGTTIPY 81
           +D S+ SQEWE MARAWLSSFPEAKA SM+E   +                 S+   IP 
Sbjct: 32  TDNSEQSQEWETMARAWLSSFPEAKAVSMDEVEAWI---------------DSNFDFIPE 91

Query: 82  LARLIPLRLDDLCIFLI----------QGKEEIQGDXXXXXXXXXXXXXXXXPHARFQRT 141
             + +P RL D+C  LI          Q KEE QGD                PHARFQRT
Sbjct: 92  GIKSMP-RL-DVCHRLIAIQNCMRSANQEKEEDQGD---------------IPHARFQRT 151

Query: 142 DQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKILK 201
           DQW PVY WLESL +D+VVKS++IS+WLT NP I++ LCSRHSRYHLMHYIKKCH+KILK
Sbjct: 152 DQWRPVYIWLESLNRDDVVKSRDISEWLTSNPKIQEYLCSRHSRYHLMHYIKKCHMKILK 209

Query: 202 RKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALP 225
           R+E+KKG Q            VHKDV MK   P
Sbjct: 212 RRERKKGVQ---QSDTPASLKVHKDVEMKREAP 209

[Close]

BLAST of Carg06794 vs. TrEMBL
Match: tr|A0A067JML3|A0A067JML3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21701 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 3.6e-41
Identity = 112/225 (49.78%), Postives = 131/225 (58.22%), Query Frame = 0


Query: 1   MSNPAEQIQEGAE-PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEERTYATP 60
           MSN    +Q  AE P+PSD NP    + SQEWE MARAWLS+FPEAKA ++ E   +   
Sbjct: 1   MSN--SNVQTLAENPRPSDQNP----NQSQEWETMARAWLSAFPEAKAVTITEVEAWI-- 60

Query: 61  PQAVVGAPINMAGKSSGTTIPYLARLIPLRLDDLCIFLIQGKEEIQGDXXXXXXXXXXXX 120
                         S+  ++P   + +P R D     LI     IQ              
Sbjct: 61  -------------DSNRGSLPADLQSMP-RTD-----LIDRLLAIQNYMRLPNQQATEMN 120

Query: 121 XXXXPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLM 180
               P ARFQRTDQW+PVYSWLESL +DEVVKSK+ISDWLTENP +RDQLCSRHSRYHLM
Sbjct: 121 QVDLPQARFQRTDQWLPVYSWLESLDKDEVVKSKDISDWLTENPEVRDQLCSRHSRYHLM 180

Query: 181 HYIKKCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALP 225
           HYIKKCHLKILKR+E+KKG              VHK V  K  +P
Sbjct: 181 HYIKKCHLKILKRRERKKG---LHQTNKPTSPKVHKIVETKEVVP 195

The following BLAST results are available for this feature:

BLAST of Carg06794 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955309.1	7.9e-77	81.30	uncharacterized protein LOC111457310 [Cucurbita moschata]	[more]
XP_022994449.1	7.9e-77	76.52	uncharacterized protein LOC111490167 [Cucurbita maxima]	[more]
XP_023542742.1	7.9e-77	81.30	uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo]	[more]
XP_022137037.1	1.6e-69	67.37	uncharacterized protein LOC111008597 isoform X2 [Momordica charantia]	[more]
XP_022137036.1	3.7e-66	66.96	uncharacterized protein LOC111008597 isoform X1 [Momordica charantia]	[more]

BLAST of Carg06794 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50410.1	2.5e-32	41.35	unknown protein	[more]

BLAST of Carg06794 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg06794 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUD5\|A0A0A0LUD5_CUCSA	1.0e-64	61.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1	[more]
tr\|A0A1S4E072\|A0A1S4E072_CUCME	3.0e-64	63.98	uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=...	[more]
tr\|M5WA44\|M5WA44_PRUPE	1.0e-43	48.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1	[more]
tr\|A0A2P6P4X0\|A0A2P6P4X0_ROSCH	1.6e-41	51.17	Putative channel forming colicin cytotoxic OS=Rosa chinensis OX=74649 GN=RchiOBH...	[more]
tr\|A0A067JML3\|A0A067JML3_JATCU	3.6e-41	49.78	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_21701 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06794-RA	Carg06794-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06794	Cla002616	Watermelon (97103) v1	carwmB0489
Carg06794	Csa1G050460	Cucumber (Chinese Long) v2	carcuB0523
Carg06794	MELO3C002358	Melon (DHL92) v3.5.1	carmeB0499
Carg06794	ClCG03G003730	Watermelon (Charleston Gray)	carwcgB0480
Carg06794	CSPI01G09510	Wild cucumber (PI 183967)	carcpiB0531
Carg06794	Cucsa.392060	Cucumber (Gy14) v1	carcgyB0571
Carg06794	CmaCh18G003200	Cucurbita maxima (Rimu)	carcmaB0693
Carg06794	CmoCh18G002170	Cucurbita moschata (Rifu)	carcmoB0673
Carg06794	Lsi02G005010	Bottle gourd (USVL1VR-Ls)	carlsiB447
Carg06794	Cp4.1LG09g09580	Cucurbita pepo (Zucchini)	carcpeB0694
Carg06794	CsGy1G009540	Cucumber (Gy14) v2	carcgybB0500
Carg06794	MELO3C002358.2	Melon (DHL92) v3.6.1	carmedB0504
Carg06794	CsaV3_1G009620	Cucumber (Chinese Long) v3	carcucB0529
Carg06794	Cla97C03G054870	Watermelon (97103) v2	carwmbB0517
Carg06794	Bhi08G001225	Wax gourd	carwgoB0602

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06794	Silver-seed gourd	carcarB390
Carg06794	Silver-seed gourd	carcarB481
Carg06794	Silver-seed gourd	carcarB484
Carg06794	Cucurbita maxima (Rimu)	carcmaB0686
Carg06794	Cucurbita maxima (Rimu)	carcmaB0688
Carg06794	Cucurbita maxima (Rimu)	carcmaB0689
Carg06794	Cucurbita moschata (Rifu)	carcmoB0668
Carg06794	Cucurbita moschata (Rifu)	carcmoB0669
Carg06794	Cucurbita moschata (Rifu)	carcmoB0670
Carg06794	Cucurbita pepo (Zucchini)	carcpeB0695
Carg06794	Cucurbita pepo (Zucchini)	carcpeB0698
Carg06794	Cucurbita pepo (Zucchini)	carcpeB0699
Carg06794	Watermelon (Charleston Gray)	carwcgB0483
Carg06794	Watermelon (97103) v1	carwmB0495
Carg06794	Watermelon (97103) v2	carwmbB0521